BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012720.2.1
(1130 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BP626631.1|BP626631 BP626631 RAFL17 Arabidopsis thaliana... 54 5e-005
gb|N95958.1|N95958 21143 CD4-14 Arabidopsis thaliana cDNA c... 48 0.003
gb|AA042169.1|AA042169 24490 CD4-13 Arabidopsis thaliana cD... 46 0.013
gb|AV786136.1|AV786136 AV786136 RAFL6 Arabidopsis thaliana ... 46 0.013
gb|AV791096.1|AV791096 AV791096 RAFL7 Arabidopsis thaliana ... 46 0.013
gb|AV799147.1|AV799147 AV799147 RAFL9 Arabidopsis thaliana ... 46 0.013
gb|AV800150.1|AV800150 AV800150 RAFL9 Arabidopsis thaliana ... 46 0.013
gb|AV813977.1|AV813977 AV813977 RAFL9 Arabidopsis thaliana ... 46 0.013
gb|BP612475.1|BP612475 BP612475 RAFL16 Arabidopsis thaliana... 46 0.013
gb|BP631113.1|BP631113 BP631113 RAFL17 Arabidopsis thaliana... 46 0.013
gb|BP631808.1|BP631808 BP631808 RAFL17 Arabidopsis thaliana... 46 0.013
gb|BP632820.1|BP632820 BP632820 RAFL17 Arabidopsis thaliana... 46 0.013
gb|BP636272.1|BP636272 BP636272 RAFL18 Arabidopsis thaliana... 46 0.013
gb|BP636455.1|BP636455 BP636455 RAFL18 Arabidopsis thaliana... 46 0.013
gb|BP785400.1|BP785400 BP785400 RAFL7 Arabidopsis thaliana ... 46 0.013
gb|BP788186.1|BP788186 BP788186 RAFL7 Arabidopsis thaliana ... 46 0.013
gb|BP789449.1|BP789449 BP789449 RAFL7 Arabidopsis thaliana ... 46 0.013
gb|BP789689.1|BP789689 BP789689 RAFL7 Arabidopsis thaliana ... 46 0.013
gb|BP791730.1|BP791730 BP791730 RAFL7 Arabidopsis thaliana ... 46 0.013
gb|BP793919.1|BP793919 BP793919 RAFL7 Arabidopsis thaliana ... 46 0.013
gb|Z29888.1|Z29888 ATTS2332 Perp-dry-seedA Arabidopsis thal... 46 0.013
gb|AF370333.1| Arabidopsis thaliana putative betaine aldehy... 46 0.013
gb|AY062987.1| Arabidopsis thaliana putative betaine aldehy... 46 0.013
ref|NM_114686.2| Arabidopsis thaliana ALDH10A9; aldehyde de... 46 0.013
gb|R90254.1|R90254 16609 Lambda-PRL2 Arabidopsis thaliana c... 44 0.052
gb|BP837650.1|BP837650 BP837650 RAFL19 Arabidopsis thaliana... 44 0.052
gb|AY093071.1| Arabidopsis thaliana similar to betaine alde... 44 0.052
gb|AY087395.1| Arabidopsis thaliana clone 34926 mRNA, compl... 44 0.052
gb|BT008872.1| Arabidopsis thaliana At1g74920 mRNA, complet... 44 0.052
emb|BX814003.1|CNS0ADO4 Arabidopsis thaliana Full-length cD... 44 0.052
dbj|AK222025.1| Arabidopsis thaliana mRNA for betaine aldeh... 44 0.052
ref|NM_106150.2| Arabidopsis thaliana ALDH10A8; aldehyde de... 44 0.052
gb|AA586226.1|AA586226 28875 Lambda-PRL2 Arabidopsis thalia... 42 0.21
gb|AA651436.1|AA651436 31550 Lambda-PRL2 Arabidopsis thalia... 42 0.21
gb|AV789345.1|AV789345 AV789345 RAFL6 Arabidopsis thaliana ... 42 0.21
gb|AV790860.1|AV790860 AV790860 RAFL7 Arabidopsis thaliana ... 42 0.21
gb|AV792807.1|AV792807 AV792807 RAFL7 Arabidopsis thaliana ... 42 0.21
gb|AV800211.1|AV800211 AV800211 RAFL9 Arabidopsis thaliana ... 42 0.21
gb|AV518932.1|AV518932 AV518932 Arabidopsis thaliana aboveg... 42 0.21
gb|AV532020.1|AV532020 AV532020 Arabidopsis thaliana flower... 42 0.21
gb|AV537751.1|AV537751 AV537751 Arabidopsis thaliana roots ... 42 0.21
gb|CK121744.1|CK121744 201a08.p1 AtM1 Arabidopsis thaliana ... 42 0.21
gb|BP573802.1|BP573802 BP573802 RAFL14 Arabidopsis thaliana... 42 0.21
gb|BP575980.1|BP575980 BP575980 RAFL14 Arabidopsis thaliana... 42 0.21
gb|BP577063.1|BP577063 BP577063 RAFL14 Arabidopsis thaliana... 42 0.21
gb|BP579190.1|BP579190 BP579190 RAFL14 Arabidopsis thaliana... 42 0.21
gb|BP581524.1|BP581524 BP581524 RAFL14 Arabidopsis thaliana... 42 0.21
gb|BP594053.1|BP594053 BP594053 RAFL15 Arabidopsis thaliana... 42 0.21
gb|BP597919.1|BP597919 BP597919 RAFL16 Arabidopsis thaliana... 42 0.21
gb|BP598322.1|BP598322 BP598322 RAFL16 Arabidopsis thaliana... 42 0.21
gb|BP599404.1|BP599404 BP599404 RAFL16 Arabidopsis thaliana... 42 0.21
gb|BP599421.1|BP599421 BP599421 RAFL16 Arabidopsis thaliana... 42 0.21
gb|BP601244.1|BP601244 BP601244 RAFL16 Arabidopsis thaliana... 42 0.21
gb|BP619533.1|BP619533 BP619533 RAFL16 Arabidopsis thaliana... 42 0.21
gb|BP628330.1|BP628330 BP628330 RAFL17 Arabidopsis thaliana... 42 0.21
gb|BP640251.1|BP640251 BP640251 RAFL19 Arabidopsis thaliana... 42 0.21
gb|BP641360.1|BP641360 BP641360 RAFL19 Arabidopsis thaliana... 42 0.21
gb|BP644564.1|BP644564 BP644564 RAFL19 Arabidopsis thaliana... 42 0.21
gb|BP646298.1|BP646298 BP646298 RAFL19 Arabidopsis thaliana... 42 0.21
gb|BP646724.1|BP646724 BP646724 RAFL19 Arabidopsis thaliana... 42 0.21
gb|BP649934.1|BP649934 BP649934 RAFL19 Arabidopsis thaliana... 42 0.21
gb|BP650560.1|BP650560 BP650560 RAFL19 Arabidopsis thaliana... 42 0.21
gb|BP671873.1|BP671873 BP671873 RAFL21 Arabidopsis thaliana... 42 0.21
gb|BP780945.1|BP780945 BP780945 RAFL7 Arabidopsis thaliana ... 42 0.21
gb|BP787250.1|BP787250 BP787250 RAFL7 Arabidopsis thaliana ... 42 0.21
gb|BP788626.1|BP788626 BP788626 RAFL7 Arabidopsis thaliana ... 42 0.21
gb|BP817965.1|BP817965 BP817965 RAFL19 Arabidopsis thaliana... 42 0.21
dbj|AK220905.1| Arabidopsis thaliana mRNA for betaine aldeh... 42 0.21
>gb|BP626631.1|BP626631 BP626631 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-48-F06 3',
mRNA sequence
Length = 369
Score = 54.0 bits (27), Expect = 5e-005
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| |||||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 134 agcttggaaggaggttggtaccatccccatggttcatcagagatatactgagtcacctgc 193
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 194 ttcacactcaagtagttctcaagtccccattctcc 228
>gb|N95958.1|N95958 21143 CD4-14 Arabidopsis thaliana cDNA clone F3F6T7, mRNA sequence
Length = 482
Score = 48.1 bits (24), Expect = 0.003
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 320 tcacagcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgac 379
||| ||||| || ||||| | |||||||||||| |||||||| ||| ||||| || ||
Sbjct: 82 tcanagcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcac 141
Query: 380 ttgcttaactgtcaggtagttatcaagaccccattctcc 418
||||| || ||| |||||| ||||| |||||||||||
Sbjct: 142 ctgcttcacactcaagtagttctcaagtccccattctcc 180
>gb|AA042169.1|AA042169 24490 CD4-13 Arabidopsis thaliana cDNA clone E3E2T7, mRNA sequence
Length = 545
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 72 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 131
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 132 ttcacactcaagtagttctcaagtccccattctcc 166
>gb|AV786136.1|AV786136 AV786136 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-N24 3',
mRNA sequence
Length = 413
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 123 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 182
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 183 ttcacactcaagtagttctcaagtccccattctcc 217
>gb|AV791096.1|AV791096 AV791096 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-N03 3',
mRNA sequence
Length = 426
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 146 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 205
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 206 ttcacactcaagtagttctcaagtccccattctcc 240
>gb|AV799147.1|AV799147 AV799147 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-18-N19 3',
mRNA sequence
Length = 415
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 140 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 199
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 200 ttcacactcaagtagttctcaagtccccattctcc 234
>gb|AV800150.1|AV800150 AV800150 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-P08 3',
mRNA sequence
Length = 414
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 82 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 141
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 142 ttcacactcaagtagttctcaagtccccattctcc 176
>gb|AV813977.1|AV813977 AV813977 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-81-D11 3',
mRNA sequence
Length = 409
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 135 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 194
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 195 ttcacactcaagtagttctcaagtccccattctcc 229
>gb|BP612475.1|BP612475 BP612475 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-89-K10 3',
mRNA sequence
Length = 427
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 155 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 214
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 215 ttcacactcaagtagttctcaagtccccattctcc 249
>gb|BP631113.1|BP631113 BP631113 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-22-G21 3',
mRNA sequence
Length = 370
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 135 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 194
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 195 ttcacactcaagtagttctcaagtccccattctcc 229
>gb|BP631808.1|BP631808 BP631808 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-24-O07 3',
mRNA sequence
Length = 352
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 135 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 194
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 195 ttcacactcaagtagttctcaagtccccattctcc 229
>gb|BP632820.1|BP632820 BP632820 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-28-I18 3',
mRNA sequence
Length = 362
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 142 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 201
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 202 ttcacactcaagtagttctcaagtccccattctcc 236
>gb|BP636272.1|BP636272 BP636272 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-03-P16 3',
mRNA sequence
Length = 445
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 152 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 211
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 212 ttcacactcaagtagttctcaagtccccattctcc 246
>gb|BP636455.1|BP636455 BP636455 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-04-J09 3',
mRNA sequence
Length = 431
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 124 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 183
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 184 ttcacactcaagtagttctcaagtccccattctcc 218
>gb|BP785400.1|BP785400 BP785400 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-94-K24 3',
mRNA sequence
Length = 402
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 157 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 216
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 217 ttcacactcaagtagttctcaagtccccattctcc 251
>gb|BP788186.1|BP788186 BP788186 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-32-J20 3',
mRNA sequence
Length = 416
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 140 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 199
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 200 ttcacactcaagtagttctcaagtccccattctcc 234
>gb|BP789449.1|BP789449 BP789449 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-39-A17 3',
mRNA sequence
Length = 410
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 150 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 209
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 210 ttcacactcaagtagttctcaagtccccattctcc 244
>gb|BP789689.1|BP789689 BP789689 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-40-B16 3',
mRNA sequence
Length = 406
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 140 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 199
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 200 ttcacactcaagtagttctcaagtccccattctcc 234
>gb|BP791730.1|BP791730 BP791730 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-48-L04 3',
mRNA sequence
Length = 401
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 114 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 173
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 174 ttcacactcaagtagttctcaagtccccattctcc 208
>gb|BP793919.1|BP793919 BP793919 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-58-D22 3',
mRNA sequence
Length = 420
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 115 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 174
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 175 ttcacactcaagtagttctcaagtccccattctcc 209
>gb|Z29888.1|Z29888 ATTS2332 Perp-dry-seedA Arabidopsis thaliana cDNA clone PAP199 3',
mRNA sequence
Length = 406
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 261 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 202
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 201 ttcacactcaagtagttctcaagtccccattctcc 167
>gb|AF370333.1| Arabidopsis thaliana putative betaine aldehyde dehydrogenase
(At3g48170) mRNA, complete cds
Length = 1721
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 1564 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 1505
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 1504 ttcacactcaagtagttctcaagtccccattctcc 1470
>gb|AY062987.1| Arabidopsis thaliana putative betaine aldehyde dehydrogenase
(At3g48170) mRNA, complete cds
Length = 1543
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 1508 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 1449
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 1448 ttcacactcaagtagttctcaagtccccattctcc 1414
>ref|NM_114686.2| Arabidopsis thaliana ALDH10A9; aldehyde dehydrogenase/ oxidoreductase
AT3G48170 (ALDH10A9) mRNA, complete cds
Length = 1722
Score = 46.1 bits (23), Expect = 0.013
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 324 agcttagatggaggctggtaccatccccacggttcatccgagcaatacttggtgacttgc 383
||||| || ||||| | |||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 1572 agcttggaaggaggtttgtaccatccccatggttcatcagagatatactgagtcacctgc 1513
Query: 384 ttaactgtcaggtagttatcaagaccccattctcc 418
|| || ||| |||||| ||||| |||||||||||
Sbjct: 1512 ttcacactcaagtagttctcaagtccccattctcc 1478
>gb|R90254.1|R90254 16609 Lambda-PRL2 Arabidopsis thaliana cDNA clone 191P13T7, mRNA
sequence
Length = 589
Score = 44.1 bits (22), Expect = 0.052
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 gagatgaacttctttatcttctcgtactgtcctt 816
||||| |||||| ||||||||||||||||||||
Sbjct: 107 gagataaacttcaatatcttctcgtactgtcctt 74
>gb|BP837650.1|BP837650 BP837650 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-21-G21 5',
mRNA sequence
Length = 366
Score = 44.1 bits (22), Expect = 0.052
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 gagatgaacttctttatcttctcgtactgtcctt 816
||||| |||||| ||||||||||||||||||||
Sbjct: 229 gagataaacttcaatatcttctcgtactgtcctt 196
>gb|AY093071.1| Arabidopsis thaliana similar to betaine aldehyde dehydrogenase
(At1g74920) mRNA, complete cds
Length = 1786
Score = 44.1 bits (22), Expect = 0.052
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 gagatgaacttctttatcttctcgtactgtcctt 816
||||| |||||| ||||||||||||||||||||
Sbjct: 1178 gagataaacttcaatatcttctcgtactgtcctt 1145
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 1583 acttgcttcacactcaagtagttatcaagtccccattctcc 1543
>gb|AY087395.1| Arabidopsis thaliana clone 34926 mRNA, complete sequence
Length = 1827
Score = 44.1 bits (22), Expect = 0.052
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 gagatgaacttctttatcttctcgtactgtcctt 816
||||| |||||| ||||||||||||||||||||
Sbjct: 1220 gagataaacttcaatatcttctcgtactgtcctt 1187
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 1625 acttgcttcacactcaagtagttatcaagtccccattctcc 1585
>gb|BT008872.1| Arabidopsis thaliana At1g74920 mRNA, complete cds
Length = 1506
Score = 44.1 bits (22), Expect = 0.052
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 gagatgaacttctttatcttctcgtactgtcctt 816
||||| |||||| ||||||||||||||||||||
Sbjct: 1049 gagataaacttcaatatcttctcgtactgtcctt 1016
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 1454 acttgcttcacactcaagtagttatcaagtccccattctcc 1414
>emb|BX814003.1|CNS0ADO4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB51ZG07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1705
Score = 44.1 bits (22), Expect = 0.052
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 gagatgaacttctttatcttctcgtactgtcctt 816
||||| |||||| ||||||||||||||||||||
Sbjct: 1158 gagataaacttcaatatcttctcgtactgtcctt 1125
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 1563 acttgcttcacactcaagtagttatcaagtccccattctcc 1523
>dbj|AK222025.1| Arabidopsis thaliana mRNA for betaine aldehyde dehydrogenase like
protein, complete cds, clone: RAFL22-71-E16
Length = 845
Score = 44.1 bits (22), Expect = 0.052
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 gagatgaacttctttatcttctcgtactgtcctt 816
||||| |||||| ||||||||||||||||||||
Sbjct: 230 gagataaacttcaatatcttctcgtactgtcctt 197
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 635 acttgcttcacactcaagtagttatcaagtccccattctcc 595
>ref|NM_106150.2| Arabidopsis thaliana ALDH10A8; aldehyde dehydrogenase/ oxidoreductase
AT1G74920 (ALDH10A8) mRNA, complete cds
Length = 1827
Score = 44.1 bits (22), Expect = 0.052
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 783 gagatgaacttctttatcttctcgtactgtcctt 816
||||| |||||| ||||||||||||||||||||
Sbjct: 1220 gagataaacttcaatatcttctcgtactgtcctt 1187
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 1625 acttgcttcacactcaagtagttatcaagtccccattctcc 1585
>gb|AA586226.1|AA586226 28875 Lambda-PRL2 Arabidopsis thaliana cDNA clone 90C12XP 3', mRNA
sequence
Length = 541
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 339 acttgcttcacactcaagtagttatcaagtccccattctcc 299
>gb|AA651436.1|AA651436 31550 Lambda-PRL2 Arabidopsis thaliana cDNA clone 191P13XP 3', mRNA
sequence
Length = 510
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 308 acttgcttcacactcaagtagttatcaagtccccattctcc 268
>gb|AV789345.1|AV789345 AV789345 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-83-E12 3',
mRNA sequence
Length = 426
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 200 acttgcttcacactcaagtagttatcaagtccccattctcc 240
>gb|AV790860.1|AV790860 AV790860 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-07-L09 3',
mRNA sequence
Length = 424
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 204 acttgcttcacactcaagtagttatcaagtccccattctcc 244
>gb|AV792807.1|AV792807 AV792807 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-16-L22 3',
mRNA sequence
Length = 444
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 201 acttgcttcacactcaagtagttatcaagtccccattctcc 241
>gb|AV800211.1|AV800211 AV800211 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-23-D11 3',
mRNA sequence
Length = 394
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 201 acttgcttcacactcaagtagttatcaagtccccattctcc 241
>gb|AV518932.1|AV518932 AV518932 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD44b05F 3', mRNA
sequence
Length = 576
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 203 acttgcttcacactcaagtagttatcaagtccccattctcc 243
>gb|AV532020.1|AV532020 AV532020 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB034c09F 3', mRNA sequence
Length = 322
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 203 acttgcttcacactcaagtagttatcaagtccccattctcc 243
>gb|AV537751.1|AV537751 AV537751 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ102f06F 3', mRNA sequence
Length = 366
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 186 acttgcttcacactcaagtagttatcaagtccccattctcc 226
>gb|CK121744.1|CK121744 201a08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A08201
5-PRIME, mRNA sequence
Length = 396
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 127 acttgcttcacactcaagtagttatcaagtccccattctcc 87
>gb|BP573802.1|BP573802 BP573802 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-85-K17 3',
mRNA sequence
Length = 398
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 201 acttgcttcacactcaagtagttatcaagtccccattctcc 241
>gb|BP575980.1|BP575980 BP575980 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-14-P07 3',
mRNA sequence
Length = 428
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 201 acttgcttcacactcaagtagttatcaagtccccattctcc 241
>gb|BP577063.1|BP577063 BP577063 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-95-D09 3',
mRNA sequence
Length = 399
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 201 acttgcttcacactcaagtagttatcaagtccccattctcc 241
>gb|BP579190.1|BP579190 BP579190 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-21-H13 3',
mRNA sequence
Length = 446
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 201 acttgcttcacactcaagtagttatcaagtccccattctcc 241
>gb|BP581524.1|BP581524 BP581524 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-32-E24 3',
mRNA sequence
Length = 460
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 219 acttgcttcacactcaagtagttatcaagtccccattctcc 259
>gb|BP594053.1|BP594053 BP594053 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-24-H16 3',
mRNA sequence
Length = 431
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 201 acttgcttcacactcaagtagttatcaagtccccattctcc 241
>gb|BP597919.1|BP597919 BP597919 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-01-I03 3',
mRNA sequence
Length = 409
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 200 acttgcttcacactcaagtagttatcaagtccccattctcc 240
>gb|BP598322.1|BP598322 BP598322 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-03-A05 3',
mRNA sequence
Length = 429
Score = 42.1 bits (21), Expect = 0.21
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 378 acttgcttaactgtcaggtagttatcaagaccccattctcc 418
|||||||| || ||| |||||||||||| |||||||||||
Sbjct: 202 acttgcttcacactcaagtagttatcaagtccccattctcc 242
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 541,956
Number of Sequences: 1013581
Number of extensions: 541956
Number of successful extensions: 39485
Number of sequences better than 0.5: 68
Number of HSP's better than 0.5 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39383
Number of HSP's gapped (non-prelim): 102
length of query: 1130
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1110
effective length of database: 888,669,252
effective search space: 986422869720
effective search space used: 986422869720
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)