BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943819.2.1
(1121 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV824396.1|AV824396 AV824396 RAFL6 Arabidopsis thaliana ... 105 2e-020
gb|DR751678.1|DR751678 12-L022342-065-009-D02-SeLA MPIZ-ADI... 105 2e-020
gb|DR751679.1|DR751679 12-L022343-065-009-D02-SeLB MPIZ-ADI... 105 2e-020
gb|AF062860.1|AF062860 Arabidopsis thaliana putative transc... 105 2e-020
gb|AY140037.1| Arabidopsis thaliana putative transcription ... 105 2e-020
gb|AY070100.1| Arabidopsis thaliana putative transcription ... 105 2e-020
gb|AY123004.1| Arabidopsis thaliana putative transcription ... 105 2e-020
emb|AX507387.1| Sequence 2082 from Patent WO0216655 105 2e-020
gb|BT006302.1| Arabidopsis thaliana At4g38620 mRNA, complet... 105 2e-020
gb|AY519615.1| Arabidopsis thaliana MYB transcription facto... 105 2e-020
emb|CS137880.1| Sequence 851 from Patent WO2005047516 105 2e-020
ref|NM_120023.2| Arabidopsis thaliana MYB4; transcription f... 105 2e-020
gb|CB256655.1|CB256655 66-E012744-027-007-D18-T7R MPIZ-ADIS... 100 1e-018
gb|BP796157.1|BP796157 BP796157 RAFL4 Arabidopsis thaliana ... 100 1e-018
gb|H36879.1|H36879 15008 Lambda-PRL2 Arabidopsis thaliana c... 98 4e-018
gb|DN604568.1|DN604568 JCAt4g38620 Arabidopsis Gateway cDNA... 98 4e-018
gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis tha... 94 6e-017
gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis tha... 94 6e-017
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 94 6e-017
emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome... 94 6e-017
emb|AL035656.1|ATT9A14 Arabidopsis thaliana DNA chromosome ... 94 6e-017
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 94 6e-017
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 94 6e-017
gb|T46204.1|T46204 9467 Lambda-PRL2 Arabidopsis thaliana cD... 92 2e-016
gb|AV831076.1|AV831076 AV831076 RAFL9 Arabidopsis thaliana ... 82 2e-013
emb|Z95763.1|ATZ95763 Arabidopsis thaliana mRNA for AtMYB4 ... 78 4e-012
gb|Z17896.1|Z17896 ATTS0380 AC16H Arabidopsis thaliana cDNA... 70 9e-010
gb|DN604581.1|DN604581 JCAt5g61420 Arabidopsis Gateway cDNA... 64 6e-008
gb|DR751443.1|DR751443 06-L021127-065-005-F01-SeLA MPIZ-ADI... 64 6e-008
gb|AF175998.1|AF175998 Arabidopsis thaliana putative transc... 64 6e-008
emb|AX506861.1| Sequence 1556 from Patent WO0216655 64 6e-008
emb|AX651823.1| Sequence 679 from Patent WO03000898 64 6e-008
gb|AY519643.1| Arabidopsis thaliana MYB transcription facto... 64 6e-008
emb|BX830516.1|CNS0A289 Arabidopsis thaliana Full-length cD... 64 6e-008
dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosom... 64 6e-008
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 64 6e-008
ref|NM_180910.1| Arabidopsis thaliana MYB28; DNA binding / ... 64 6e-008
ref|NM_125535.2| Arabidopsis thaliana MYB28; DNA binding / ... 64 6e-008
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 64 6e-008
gb|CK119118.1|CK119118 214c05.p1 AtM1 Arabidopsis thaliana ... 60 9e-007
gb|DN604579.1|DN604579 JCAt3g01140 Arabidopsis Gateway cDNA... 60 9e-007
gb|DR750660.1|DR750660 45-L022342-065-009-E06-SeLA MPIZ-ADI... 60 9e-007
gb|DR750661.1|DR750661 45-L022343-065-009-E06-SeLB MPIZ-ADI... 60 9e-007
gb|AF249309.1|AF249309 Arabidopsis thaliana putative transc... 60 9e-007
gb|BV008056.1| MASC_STS15898 Arabidopsis thaliana (Guecking... 60 9e-007
gb|BV008057.1| MASC_STS15904 Arabidopsis thaliana (Koncheze... 60 9e-007
gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome II... 60 9e-007
gb|AY519581.1| Arabidopsis thaliana MYB transcription facto... 60 9e-007
emb|BX815211.1|CNS0AAGG Arabidopsis thaliana Full-length cD... 60 9e-007
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 60 9e-007
ref|NM_110979.2| Arabidopsis thaliana MYB106; DNA binding /... 60 9e-007
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 60 9e-007
gb|DN604610.1|DN604610 JCAt3g06490 Arabidopsis Gateway cDNA... 56 1e-005
gb|DR751227.1|DR751227 17-L022342-065-009-A03-SeLA MPIZ-ADI... 56 1e-005
gb|DR751228.1|DR751228 17-L022343-065-009-A03-SeLB MPIZ-ADI... 56 1e-005
gb|AF262733.2|AF262733 Arabidopsis thaliana putative transc... 56 1e-005
gb|AC020580.11|AC020580 Arabidopsis thaliana chromosome 3 B... 56 1e-005
gb|AY519584.1| Arabidopsis thaliana MYB transcription facto... 56 1e-005
ref|NM_111525.2| Arabidopsis thaliana MYB108; DNA binding /... 56 1e-005
gb|AQ969545.1|AQ969545 LERJO14TF LERG Arabidopsis thaliana ... 54 5e-005
gb|AQ969546.1|AQ969546 LERJO14TR LERG Arabidopsis thaliana ... 54 5e-005
gb|AF176002.1|AF176002 Arabidopsis thaliana putative transc... 54 5e-005
emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome... 54 5e-005
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 54 5e-005
ref|NM_118827.1| Arabidopsis thaliana MYB97; DNA binding / ... 54 5e-005
emb|AL091598.1|CNS00UY8 Arabidopsis thaliana genome survey ... 52 2e-004
emb|CR405437.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 2e-004
emb|CR405438.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 2e-004
gb|T22593.1|T22593 4601 Lambda-PRL2 Arabidopsis thaliana cD... 52 2e-004
gb|T43937.1|T43937 7200 Lambda-PRL2 Arabidopsis thaliana cD... 52 2e-004
gb|AI993846.1|AI993846 701515156 A. thaliana, Ohio State cl... 52 2e-004
gb|AV827754.1|AV827754 AV827754 RAFL9 Arabidopsis thaliana ... 52 2e-004
gb|AU238168.1|AU238168 AU238168 RAFL16 Arabidopsis thaliana... 52 2e-004
gb|BP562693.1|BP562693 BP562693 RAFL14 Arabidopsis thaliana... 52 2e-004
gb|CB255433.1|CB255433 42-E012998-019-004-C12-T7R MPIZ-ADIS... 52 2e-004
gb|DR751187.1|DR751187 19-L022342-065-009-C03-SeLA MPIZ-ADI... 52 2e-004
gb|DR751504.1|DR751504 03-L021127-065-005-C01-SeLA MPIZ-ADI... 52 2e-004
gb|U26937.1|ATU26937 Arabidopsis thaliana clone myb7 DNA-bi... 52 2e-004
gb|AF062887.1|AF062887 Arabidopsis thaliana putative transc... 52 2e-004
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 52 2e-004
gb|AY072387.1| Arabidopsis thaliana putative MYB family tra... 52 2e-004
emb|AX507298.1| Sequence 1993 from Patent WO0216655 52 2e-004
emb|AX507651.1| Sequence 2346 from Patent WO0216655 52 2e-004
emb|AX651296.1| Sequence 81 from Patent WO03000898 52 2e-004
emb|AX651705.1| Sequence 535 from Patent WO03000898 52 2e-004
gb|BT006244.1| Arabidopsis thaliana At1g18570 mRNA, complet... 52 2e-004
gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16... 52 2e-004
gb|AC005825.4| Arabidopsis thaliana chromosome 2 clone T24I... 52 2e-004
gb|AY519555.1| Arabidopsis thaliana MYB transcription facto... 52 2e-004
gb|AY519573.1| Arabidopsis thaliana MYB transcription facto... 52 2e-004
emb|BX821980.1|CNS0AA2S Arabidopsis thaliana Full-length cD... 52 2e-004
emb|BX815450.1|CNS0ABCE Arabidopsis thaliana Full-length cD... 52 2e-004
emb|BX815802.1|CNS0ABCU Arabidopsis thaliana Full-length cD... 52 2e-004
emb|BX814902.1|CNS0ACDI Arabidopsis thaliana Full-length cD... 52 2e-004
dbj|AK117331.1| Arabidopsis thaliana At1g18570 mRNA for unk... 52 2e-004
emb|X90385.1|ATY49GENE A.thaliana DNA for Y49 gene 52 2e-004
emb|CS137944.1| Sequence 915 from Patent WO2005047516 52 2e-004
ref|NM_101715.3| Arabidopsis thaliana MYB51; DNA binding / ... 52 2e-004
ref|NM_127224.3| Arabidopsis thaliana MYB7; DNA binding / t... 52 2e-004
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 52 2e-004
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 52 2e-004
emb|CR404092.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 8e-004
emb|CR404093.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 8e-004
gb|AU236547.1|AU236547 AU236547 RAFL15 Arabidopsis thaliana... 50 8e-004
gb|DN604583.1|DN604583 JCAt5g15310 Arabidopsis Gateway cDNA... 50 8e-004
gb|DN604586.1|DN604586 JCAt5g07690 Arabidopsis Gateway cDNA... 50 8e-004
gb|DR749923.1|DR749923 82-L022342-065-009-B11-SeLA MPIZ-ADI... 50 8e-004
gb|DR749924.1|DR749924 82-L022343-065-009-B11-SeLB MPIZ-ADI... 50 8e-004
gb|DR751444.1|DR751444 06-L021131-065-005-F01-SeLB MPIZ-ADI... 50 8e-004
emb|X99809.1|ATMIXTA A.thaliana mRNA for Mixta protein 50 8e-004
gb|AF062872.1|AF062872 Arabidopsis thaliana putative transc... 50 8e-004
gb|AF370613.1|AF370613 Arabidopsis thaliana myb-related pro... 50 8e-004
gb|AY035145.1| Arabidopsis thaliana putative transcription ... 50 8e-004
gb|AY059078.1| Arabidopsis thaliana putative transcription ... 50 8e-004
gb|AY519617.1| Arabidopsis thaliana MYB transcription facto... 50 8e-004
gb|AY519624.1| Arabidopsis thaliana MYB transcription facto... 50 8e-004
emb|BX833049.1|CNS09Z4V Arabidopsis thaliana Full-length cD... 50 8e-004
dbj|AB010070.1| Arabidopsis thaliana genomic DNA, chromosom... 50 8e-004
emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome ... 50 8e-004
ref|NM_120851.1| Arabidopsis thaliana MYB29; DNA binding / ... 50 8e-004
ref|NM_121535.2| Arabidopsis thaliana DNA binding / transcr... 50 8e-004
gb|BP867048.1|BP867048 BP867048 RAFL21 Arabidopsis thaliana... 48 0.003
gb|DR751024.1|DR751024 27-L022242-065-008-C04-SeLA MPIZ-ADI... 48 0.003
gb|DR751025.1|DR751025 27-L022243-065-008-C04-SeLB MPIZ-ADI... 48 0.003
gb|AF062895.1|AF062895 Arabidopsis thaliana putative transc... 48 0.003
gb|BT005074.1| Arabidopsis thaliana clone U50259 putative m... 48 0.003
emb|AL773061.1| Arabidopsis thaliana transposon insertion S... 48 0.003
gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis tha... 48 0.003
gb|AY519551.1| Arabidopsis thaliana MYB transcription facto... 48 0.003
emb|BX817339.1|CNS0AAUG Arabidopsis thaliana Full-length cD... 48 0.003
dbj|AK117469.1| Arabidopsis thaliana At1g08810 mRNA for put... 48 0.003
emb|CS137506.1| Sequence 477 from Patent WO2005047516 48 0.003
ref|NM_100755.2| Arabidopsis thaliana MYB60; DNA binding / ... 48 0.003
ref|NM_202066.1| Arabidopsis thaliana MYB60; DNA binding AT... 48 0.003
emb|AL095809.1|CNS00Y77 Arabidopsis thaliana genome survey ... 44 0.052
emb|CR398014.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.052
gb|T42000.1|T42000 5263 Lambda-PRL2 Arabidopsis thaliana cD... 44 0.052
gb|AU237832.1|AU237832 AU237832 RAFL16 Arabidopsis thaliana... 44 0.052
gb|AV553519.1|AV553519 AV553519 Arabidopsis thaliana roots ... 44 0.052
gb|CB254952.1|CB254952 56-E012999-019-004-P13-T7R MPIZ-ADIS... 44 0.052
gb|DN604580.1|DN604580 JCAt1g74650 Arabidopsis Gateway cDNA... 44 0.052
gb|DN604589.1|DN604589 JCAt2g32460 Arabidopsis Gateway cDNA... 44 0.052
gb|DN604734.1|DN604734 JCAt1g22640 Arabidopsis Gateway cDNA... 44 0.052
gb|DR751182.1|DR751182 19-L021127-065-005-C03-SeLA MPIZ-ADI... 44 0.052
gb|DR751183.1|DR751183 19-L021131-065-005-C03-SeLB MPIZ-ADI... 44 0.052
gb|DR751291.1|DR751291 15-L021127-065-005-G02-SeLA MPIZ-ADI... 44 0.052
gb|AF062859.1|AF062859 Arabidopsis thaliana putative transc... 44 0.052
gb|AF371979.1|AF371979 Arabidopsis thaliana putative transc... 44 0.052
gb|AF411970.1|AF411970 Arabidopsis thaliana putative transc... 44 0.052
gb|AY072543.1| Arabidopsis thaliana At1g22640/F12K8.1 mRNA,... 44 0.052
emb|AX507941.1| Sequence 2636 from Patent WO0216655 44 0.052
gb|BT000841.1| Arabidopsis thaliana At1g22640/F12K8.1 mRNA,... 44 0.052
gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BA... 44 0.052
gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC ... 44 0.052
gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BA... 44 0.052
gb|AC004681.3| Arabidopsis thaliana chromosome 2 clone T26B... 44 0.052
gb|AC005700.3| Arabidopsis thaliana chromosome 2 clone T32F... 44 0.052
gb|AY519557.1| Arabidopsis thaliana MYB transcription facto... 44 0.052
gb|AY519571.1| Arabidopsis thaliana MYB transcription facto... 44 0.052
gb|AY519576.1| Arabidopsis thaliana MYB transcription facto... 44 0.052
emb|BX819091.1|CNS0A9R8 Arabidopsis thaliana Full-length cD... 44 0.052
emb|BX819423.1|CNS0A9WI Arabidopsis thaliana Full-length cD... 44 0.052
emb|BX818559.1|CNS0AB0D Arabidopsis thaliana Full-length cD... 44 0.052
emb|BX815369.1|CNS0ABF8 Arabidopsis thaliana Full-length cD... 44 0.052
emb|BX814709.1|CNS0AC2T Arabidopsis thaliana Full-length cD... 44 0.052
emb|BX814742.1|CNS0AEA2 Arabidopsis thaliana Full-length cD... 44 0.052
dbj|AB017059.1| Arabidopsis thaliana genomic DNA, chromosom... 44 0.052
emb|X90379.1|ATM1GENE A.thaliana DNA for M1 gene 44 0.052
emb|X90387.1|ATCY13GEN A.thaliana DNA for cY13 gene 44 0.052
emb|X90383.1|ATY13GENE A.thaliana DNA for Y13 gene 44 0.052
emb|CS137556.1| Sequence 527 from Patent WO2005047516 44 0.052
emb|CS137618.1| Sequence 589 from Patent WO2005047516 44 0.052
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 44 0.052
ref|NM_124884.1| Arabidopsis thaliana MYB120; DNA binding /... 44 0.052
ref|NM_128805.3| Arabidopsis thaliana DNA binding / transcr... 44 0.052
ref|NM_102111.2| Arabidopsis thaliana MYB3; DNA binding / t... 44 0.052
ref|NM_106123.3| Arabidopsis thaliana DNA binding / transcr... 44 0.052
emb|AL091219.1|CNS00UNP Arabidopsis thaliana genome survey ... 42 0.20
gb|AV822464.1|AV822464 AV822464 RAFL5 Arabidopsis thaliana ... 42 0.20
gb|AV823002.1|AV823002 AV823002 RAFL5 Arabidopsis thaliana ... 42 0.20
gb|AV441691.1|AV441691 AV441691 Arabidopsis thaliana above-... 42 0.20
gb|BP815199.1|BP815199 BP815199 RAFL19 Arabidopsis thaliana... 42 0.20
gb|DN604603.1|DN604603 JCAt3g61250 Arabidopsis Gateway cDNA... 42 0.20
gb|DN604621.1|DN604621 JCAt3g46130 Arabidopsis Gateway cDNA... 42 0.20
gb|DR749878.1|DR749878 86-L022342-065-009-F11-SeLA MPIZ-ADI... 42 0.20
gb|DR749879.1|DR749879 86-L022343-065-009-F11-SeLB MPIZ-ADI... 42 0.20
gb|DR750414.1|DR750414 55-L022242-065-008-G07-SeLA MPIZ-ADI... 42 0.20
gb|DR750850.1|DR750850 35-L022242-065-008-C05-SeLA MPIZ-ADI... 42 0.20
gb|DR750851.1|DR750851 35-L022243-065-008-C05-SeLB MPIZ-ADI... 42 0.20
gb|DR750877.1|DR750877 33-L022342-065-009-A05-SeLA MPIZ-ADI... 42 0.20
gb|DR751005.1|DR751005 28-L022242-065-008-D04-SeLA MPIZ-ADI... 42 0.20
gb|AF062866.1|AF062866 Arabidopsis thaliana putative transc... 42 0.20
gb|AF062907.1|AF062907 Arabidopsis thaliana putative transc... 42 0.20
emb|AX059539.1| Sequence 272 from Patent WO0055325 42 0.20
gb|AF386932.1|AF386932 Arabidopsis thaliana Unknown protein... 42 0.20
gb|AF175989.1|AF175989 Arabidopsis thaliana putative transc... 42 0.20
gb|AF272733.1|AF272733 Arabidopsis thaliana putative transc... 42 0.20
emb|AX507547.1| Sequence 2242 from Patent WO0216655 42 0.20
gb|BT001182.1| Arabidopsis thaliana Unknown protein (At4g05... 42 0.20
gb|BT005642.1| Arabidopsis thaliana clone U51012 putative M... 42 0.20
emb|AJ531569.1|ATH531569 Arabidopsis thaliana T-DNA flankin... 42 0.20
emb|BX323972.1| Arabidopsis thaliana transposon insertion S... 42 0.20
gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis tha... 42 0.20
gb|AY519594.1| Arabidopsis thaliana MYB transcription facto... 42 0.20
gb|AY519601.1| Arabidopsis thaliana MYB transcription facto... 42 0.20
gb|AY519603.1| Arabidopsis thaliana MYB transcription facto... 42 0.20
emb|BX823909.1|CNS0A5GO Arabidopsis thaliana Full-length cD... 42 0.20
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 42 0.20
dbj|AK118728.1| Arabidopsis thaliana At4g17780 mRNA for put... 42 0.20
gb|AY550297.1| Arabidopsis thaliana MYB transcription facto... 42 0.20
emb|CQ805082.1| Sequence 1493 from Patent WO2004035798 42 0.20
dbj|AK176475.1| Arabidopsis thaliana mRNA for Myb DNA bindi... 42 0.20
emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome... 42 0.20
emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosom... 42 0.20
emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosom... 42 0.20
emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome... 42 0.20
emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ... 42 0.20
gb|DQ075255.1| Arabidopsis thaliana MYB transcription facto... 42 0.20
gb|DQ075256.1| Arabidopsis thaliana MYB transcription facto... 42 0.20
gb|DQ075257.1| Arabidopsis thaliana MYB transcription facto... 42 0.20
ref|NM_114482.1| Arabidopsis thaliana MYB111; DNA binding /... 42 0.20
ref|NM_116749.2| Arabidopsis thaliana DNA binding / transcr... 42 0.20
ref|NM_117888.2| Arabidopsis thaliana DNA binding / transcr... 42 0.20
ref|NM_115989.3| Arabidopsis thaliana DNA binding / transcr... 42 0.20
ref|NM_001035739.1| Arabidopsis thaliana MYB111; DNA bindin... 42 0.20
>gb|AV824396.1|AV824396 AV824396 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-D11 5',
mRNA sequence
Length = 550
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 364 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 305
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 304 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 245
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 244 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 185
Query: 972 ttgcc 976
|||||
Sbjct: 184 ttgcc 180
>gb|DR751678.1|DR751678 12-L022342-065-009-D02-SeLA MPIZ-ADIS-065f Arabidopsis thaliana
cDNA clone 009-D02, mRNA sequence
Length = 840
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 404 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 345
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 344 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 285
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 284 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 225
Query: 972 ttgcc 976
|||||
Sbjct: 224 ttgcc 220
>gb|DR751679.1|DR751679 12-L022343-065-009-D02-SeLB MPIZ-ADIS-065f Arabidopsis thaliana
cDNA clone 009-D02, mRNA sequence
Length = 889
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 610 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 669
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 670 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 729
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 730 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 789
Query: 972 ttgcc 976
|||||
Sbjct: 790 ttgcc 794
>gb|AF062860.1|AF062860 Arabidopsis thaliana putative transcription factor (MYB4) mRNA,
complete cds
Length = 1003
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 370 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 311
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 310 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 251
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 250 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 191
Query: 972 ttgcc 976
|||||
Sbjct: 190 ttgcc 186
>gb|AY140037.1| Arabidopsis thaliana putative transcription factor MYB4 (At4g38620)
mRNA, complete cds
Length = 1287
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 648 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 589
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 588 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 529
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 528 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 469
Query: 972 ttgcc 976
|||||
Sbjct: 468 ttgcc 464
>gb|AY070100.1| Arabidopsis thaliana putative transcription factor MYB4 (At4g38620)
mRNA, complete cds
Length = 1012
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 363 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 304
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 303 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 244
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 243 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 184
Query: 972 ttgcc 976
|||||
Sbjct: 183 ttgcc 179
>gb|AY123004.1| Arabidopsis thaliana putative transcription factor MYB4 (At4g38620)
mRNA, complete cds
Length = 880
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 332 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 273
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 272 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 213
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 212 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 153
Query: 972 ttgcc 976
|||||
Sbjct: 152 ttgcc 148
>emb|AX507387.1| Sequence 2082 from Patent WO0216655
Length = 849
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 332 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 273
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 272 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 213
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 212 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 153
Query: 972 ttgcc 976
|||||
Sbjct: 152 ttgcc 148
>gb|BT006302.1| Arabidopsis thaliana At4g38620 mRNA, complete cds
Length = 849
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 332 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 273
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 272 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 213
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 212 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 153
Query: 972 ttgcc 976
|||||
Sbjct: 152 ttgcc 148
>gb|AY519615.1| Arabidopsis thaliana MYB transcription factor (At4g38620) mRNA,
complete cds
Length = 849
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 332 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 273
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 272 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 213
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 212 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 153
Query: 972 ttgcc 976
|||||
Sbjct: 152 ttgcc 148
>emb|CS137880.1| Sequence 851 from Patent WO2005047516
Length = 1087
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 435 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 376
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 375 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 316
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 315 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 256
Query: 972 ttgcc 976
|||||
Sbjct: 255 ttgcc 251
>ref|NM_120023.2| Arabidopsis thaliana MYB4; transcription factor AT4G38620 (MYB4)
mRNA, complete cds
Length = 1287
Score = 105 bits (53), Expect = 2e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 647 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 588
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 587 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 528
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 527 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 468
Query: 972 ttgcc 976
|||||
Sbjct: 467 ttgcc 463
>gb|CB256655.1|CB256655 66-E012744-027-007-D18-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772D187Q 5-PRIME, mRNA sequence
Length = 669
Score = 99.6 bits (50), Expect = 1e-018
Identities = 149/182 (81%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatgagc 854
|||||||| |||||||| |||||||| || || | ||||| | | | |||| || |||
Sbjct: 530 gtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaataagc 471
Query: 855 gaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtg 914
||||| ||||| || || ||||| || ||||||| |||||| ||||| || || |||||
Sbjct: 470 gaccatttgttgccaagaaggctatggagcttgatgatgagctcgtcttcttcctcggtg 411
Query: 915 aagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttg 974
||||| || ||||| ||||| |||||||| |||||||||||||| || ||||||||||||
Sbjct: 410 aagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctcttg 351
Query: 975 cc 976
||
Sbjct: 350 cc 349
>gb|BP796157.1|BP796157 BP796157 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-12-F08 5',
mRNA sequence
Length = 653
Score = 99.6 bits (50), Expect = 1e-018
Identities = 151/185 (81%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 592 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 533
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 532 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 473
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||| ||| || |||||||||
Sbjct: 472 gtgaagtttccacgcttaaggtcaggccggagatagttgatccnccggagacggcagctc 413
Query: 972 ttgcc 976
|||||
Sbjct: 412 ttgcc 408
>gb|H36879.1|H36879 15008 Lambda-PRL2 Arabidopsis thaliana cDNA clone 180F18T7, mRNA
sequence
Length = 450
Score = 97.6 bits (49), Expect = 4e-018
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 287 agcgaccatttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcg 228
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 227 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 168
Query: 972 ttgcc 976
|||||
Sbjct: 167 ttgcc 163
>gb|DN604568.1|DN604568 JCAt4g38620 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 344
Score = 97.6 bits (49), Expect = 4e-018
Identities = 151/185 (81%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtccgtccgccccgggagccgcgcggcgatg 851
||||||||||| |||||||| |||||||| || || | ||||| | | | |||| ||
Sbjct: 327 tgcgtgttccaatagttctttatctcgttatctgttcttcccggtaatctcccggcaata 268
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || |||||| |||||| ||||| || || ||
Sbjct: 267 agcgaccatttgttgccaagaaggctatggagcttggtgatgagttcgtcttcttcctcg 208
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 207 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 148
Query: 972 ttgcc 976
|||||
Sbjct: 147 ttgcc 143
>gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis thaliana Clone T26G08 From Chromosome
IV, complete sequence
Length = 94770
Score = 93.7 bits (47), Expect = 6e-017
Identities = 101/119 (84%)
Strand = Plus / Plus
Query: 858 cacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaag 917
|||||||| || || ||||| || ||||||| |||||| ||||| || || ||||||||
Sbjct: 80203 cacttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcggtgaag 80262
Query: 918 ttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|| || ||||| ||||| |||||||| |||||||||||||| || ||||||||||||||
Sbjct: 80263 tttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctcttgcc 80321
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
||||||||||| |||||||| ||||||||
Sbjct: 79975 tgcgtgttccaatagttctttatctcgtt 80003
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome
IV, complete sequence
Length = 107740
Score = 93.7 bits (47), Expect = 6e-017
Identities = 101/119 (84%)
Strand = Plus / Plus
Query: 858 cacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaag 917
|||||||| || || ||||| || ||||||| |||||| ||||| || || ||||||||
Sbjct: 2454 cacttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcggtgaag 2513
Query: 918 ttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|| || ||||| ||||| |||||||| |||||||||||||| || ||||||||||||||
Sbjct: 2514 tttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctcttgcc 2572
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
||||||||||| |||||||| ||||||||
Sbjct: 2226 tgcgtgttccaatagttctttatctcgtt 2254
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 93.7 bits (47), Expect = 6e-017
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 858 cacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaag 917
|||||||| || || ||||| || ||||||| |||||| ||||| || || ||||||||
Sbjct: 13966922 cacttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcggtgaag 13966863
Query: 918 ttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|| || ||||| ||||| |||||||| |||||||||||||| || ||||||||||||||
Sbjct: 13966862 tttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctcttgcc 13966804
Score = 54.0 bits (27), Expect = 5e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 794 cgtgttccagtagttcttgatctcgtt 820
|||||||||||||||||||||||||||
Sbjct: 9441047 cgtgttccagtagttcttgatctcgtt 9441021
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
||||||||||| |||||||| ||||||||
Sbjct: 13967150 tgcgtgttccaatagttctttatctcgtt 13967122
Score = 42.1 bits (21), Expect = 0.20
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|||||||| || || |||||||| ||||| |||||||||||
Sbjct: 5795934 ggccggagataattcatccaccggagccgacagctcttgcc 5795974
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone F20M13 (ESSA project)
Length = 91938
Score = 93.7 bits (47), Expect = 6e-017
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 858 cacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaag 917
|||||||| || || ||||| || ||||||| |||||| ||||| || || ||||||||
Sbjct: 64014 cacttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcggtgaag 63955
Query: 918 ttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|| || ||||| ||||| |||||||| |||||||||||||| || ||||||||||||||
Sbjct: 63954 tttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctcttgcc 63896
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
||||||||||| |||||||| ||||||||
Sbjct: 64242 tgcgtgttccaatagttctttatctcgtt 64214
>emb|AL035656.1|ATT9A14 Arabidopsis thaliana DNA chromosome 4, BAC clone T9A14 (ESSA
project)
Length = 88164
Score = 93.7 bits (47), Expect = 6e-017
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 858 cacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaag 917
|||||||| || || ||||| || ||||||| |||||| ||||| || || ||||||||
Sbjct: 700 cacttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcggtgaag 641
Query: 918 ttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|| || ||||| ||||| |||||||| |||||||||||||| || ||||||||||||||
Sbjct: 640 tttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctcttgcc 582
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
||||||||||| |||||||| ||||||||
Sbjct: 928 tgcgtgttccaatagttctttatctcgtt 900
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
Length = 199789
Score = 93.7 bits (47), Expect = 6e-017
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 858 cacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaag 917
|||||||| || || ||||| || ||||||| |||||| ||||| || || ||||||||
Sbjct: 163073 cacttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcggtgaag 163014
Query: 918 ttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|| || ||||| ||||| |||||||| |||||||||||||| || ||||||||||||||
Sbjct: 163013 tttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctcttgcc 162955
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
||||||||||| |||||||| ||||||||
Sbjct: 163301 tgcgtgttccaatagttctttatctcgtt 163273
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 93.7 bits (47), Expect = 6e-017
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 858 cacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcggtgaag 917
|||||||| || || ||||| || ||||||| |||||| ||||| || || ||||||||
Sbjct: 18054125 cacttgttgccaagaaggctatggagcttgatgatgagttcgtcttcttcctcggtgaag 18054066
Query: 918 ttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|| || ||||| ||||| |||||||| |||||||||||||| || ||||||||||||||
Sbjct: 18054065 tttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctcttgcc 18054007
Score = 54.0 bits (27), Expect = 5e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 794 cgtgttccagtagttcttgatctcgtt 820
|||||||||||||||||||||||||||
Sbjct: 13528279 cgtgttccagtagttcttgatctcgtt 13528253
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
||||||||||| |||||||| ||||||||
Sbjct: 18054353 tgcgtgttccaatagttctttatctcgtt 18054325
Score = 42.1 bits (21), Expect = 0.20
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 936 ggccggaggtagttgatccaccgcagccggcagctcttgcc 976
|||||||| || || |||||||| ||||| |||||||||||
Sbjct: 9883191 ggccggagataattcatccaccggagccgacagctcttgcc 9883231
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtc 823
|||||||| ||||| ||||||||||||||
Sbjct: 2619145 gtgttccaatagtttttgatctcgttgtc 2619117
>gb|T46204.1|T46204 9467 Lambda-PRL2 Arabidopsis thaliana cDNA clone 138E3T7, mRNA
sequence
Length = 420
Score = 91.7 bits (46), Expect = 2e-016
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| |||| || || ||
Sbjct: 288 agcgaccatttgttgccaagaaggctatggagcttgatgatgagtncgtcttcttcctcg 229
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagctc 971
|||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 228 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccggagacggcagctc 169
Query: 972 ttgcc 976
|||||
Sbjct: 168 ttgcc 164
>gb|AV831076.1|AV831076 AV831076 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-83-P06 5',
mRNA sequence
Length = 597
Score = 81.8 bits (41), Expect = 2e-013
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 884 cttgacgatgaggtcgtcctcgtcggcggtgaagttgccgcgcttcaggtcgggccggag 943
||||| |||||| ||||| || || |||||||||| || ||||| ||||| ||||||||
Sbjct: 557 cttgatgatgagttcgtcttcttcctcggtgaagtttccacgcttaaggtcaggccggag 498
Query: 944 gtagttgatccaccgcagccggcagctcttgcc 976
|||||||||||||| || ||||||||||||||
Sbjct: 497 atagttgatccaccggagacggcagctcttgcc 465
>emb|Z95763.1|ATZ95763 Arabidopsis thaliana mRNA for AtMYB4 R2R3-MYB transcription factor
Length = 135
Score = 77.8 bits (39), Expect = 4e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 852 agcgaccacttgttcccgaggaggctgtgcagcttgacgatgaggtcgtcctcgtcggcg 911
|||||||| ||||| || || ||||| || ||||||| |||||| ||||| || || ||
Sbjct: 110 agcgaccatttgttgccaagaaggctatggagcttgatgatgagctcgtcttcttcctcg 51
Query: 912 gtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccg 958
|||||||| || ||||| ||||| |||||||| ||||||||||||||
Sbjct: 50 gtgaagtttccacgcttaaggtcaggccggagatagttgatccaccg 4
>gb|Z17896.1|Z17896 ATTS0380 AC16H Arabidopsis thaliana cDNA clone TASF016 5' similar
to Zea mays myb-like transcription factor. EMBL entry
M73028., mRNA sequence
Length = 216
Score = 69.9 bits (35), Expect = 9e-010
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 910 cggtgaagttgccgcgcttcaggtcgggccggaggtagttgatccaccgcagccggcagc 969
|||||||||| || ||||| ||||| |||||||| |||||||||||||| || |||||||
Sbjct: 211 cggtgaagtt-ccacgcttaaggtcaggccggagatagttgatccaccggagacggcagc 153
Query: 970 tcttgcc 976
|||||||
Sbjct: 152 tcttgcc 146
>gb|DN604581.1|DN604581 JCAt5g61420 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 619
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 327 tgcgtgttccagtagttcttgatctcgttgtc 296
>gb|DR751443.1|DR751443 06-L021127-065-005-F01-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-F01, mRNA sequence
Length = 796
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 403 tgcgtgttccagtagttcttgatctcgttgtc 372
>gb|AF175998.1|AF175998 Arabidopsis thaliana putative transcription factor (MYB28) mRNA,
complete cds
Length = 1101
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 332 tgcgtgttccagtagttcttgatctcgttgtc 301
>emb|AX506861.1| Sequence 1556 from Patent WO0216655
Length = 1101
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 332 tgcgtgttccagtagttcttgatctcgttgtc 301
>emb|AX651823.1| Sequence 679 from Patent WO03000898
Length = 1100
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 332 tgcgtgttccagtagttcttgatctcgttgtc 301
>gb|AY519643.1| Arabidopsis thaliana MYB transcription factor (At5g61420) mRNA,
complete cds
Length = 1101
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 332 tgcgtgttccagtagttcttgatctcgttgtc 301
>emb|BX830516.1|CNS0A289 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB88ZE08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1710
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 614 tgcgtgttccagtagttcttgatctcgttgtc 583
>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13
Length = 80376
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 60802 tgcgtgttccagtagttcttgatctcgttgtc 60833
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 21925557 tgcgtgttccagtagttcttgatctcgttgtc 21925588
Score = 50.1 bits (25), Expect = 8e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtc 823
|||||||| ||||||||||||||||||||
Sbjct: 4758353 gtgttccaatagttcttgatctcgttgtc 4758325
Score = 50.1 bits (25), Expect = 8e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
|||||||||||||||||||| ||||||||
Sbjct: 2276644 tgcgtgttccagtagttcttaatctcgtt 2276616
>ref|NM_180910.1| Arabidopsis thaliana MYB28; DNA binding / transcription factor
AT5G61420 (MYB28) transcript variant AT5G61420.1 mRNA,
complete cds
Length = 1805
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 712 tgcgtgttccagtagttcttgatctcgttgtc 681
>ref|NM_125535.2| Arabidopsis thaliana MYB28; DNA binding / transcription factor
AT5G61420 (MYB28) transcript variant AT5G61420.2 mRNA,
complete cds
Length = 1425
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 332 tgcgtgttccagtagttcttgatctcgttgtc 301
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 63.9 bits (32), Expect = 6e-008
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 792 tgcgtgttccagtagttcttgatctcgttgtc 823
||||||||||||||||||||||||||||||||
Sbjct: 24707470 tgcgtgttccagtagttcttgatctcgttgtc 24707501
Score = 50.1 bits (25), Expect = 8e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtc 823
|||||||| ||||||||||||||||||||
Sbjct: 4975380 gtgttccaatagttcttgatctcgttgtc 4975352
Score = 50.1 bits (25), Expect = 8e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 792 tgcgtgttccagtagttcttgatctcgtt 820
|||||||||||||||||||| ||||||||
Sbjct: 2447607 tgcgtgttccagtagttcttaatctcgtt 2447579
Score = 44.1 bits (22), Expect = 0.052
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 794 cgtgttccagtagttcttgatctcgttgtc 823
||||||||| |||||||| |||||||||||
Sbjct: 22343025 cgtgttccaatagttcttaatctcgttgtc 22343054
>gb|CK119118.1|CK119118 214c05.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C05214
5-PRIME, mRNA sequence
Length = 784
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 433 gtgttccagtagttcttgatctcgttgtctgtcc 400
>gb|DN604579.1|DN604579 JCAt3g01140 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 637
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 324 gtgttccagtagttcttgatctcgttgtctgtcc 291
>gb|DR750660.1|DR750660 45-L022342-065-009-E06-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-E06, mRNA sequence
Length = 879
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 401 gtgttccagtagttcttgatctcgttgtctgtcc 368
>gb|DR750661.1|DR750661 45-L022343-065-009-E06-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-E06, mRNA sequence
Length = 865
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 800 gtgttccagtagttcttgatctcgttgtctgtcc 833
>gb|AF249309.1|AF249309 Arabidopsis thaliana putative transcription factor (MYB106) mRNA,
complete cds
Length = 1038
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 329 gtgttccagtagttcttgatctcgttgtctgtcc 296
>gb|BV008056.1| MASC_STS15898 Arabidopsis thaliana (Gueckingen-0 accession) genomic
DNA Arabidopsis thaliana STS genomic, sequence tagged
site
Length = 653
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 425 gtgttccagtagttcttgatctcgttgtctgtcc 392
>gb|BV008057.1| MASC_STS15904 Arabidopsis thaliana (Konchezero accession) genomic
DNA Arabidopsis thaliana STS genomic, sequence tagged
site
Length = 496
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 402 gtgttccagtagttcttgatctcgttgtctgtcc 369
>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence,
complete sequence
Length = 93735
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 49760 gtgttccagtagttcttgatctcgttgtctgtcc 49727
>gb|AY519581.1| Arabidopsis thaliana MYB transcription factor (At3g01140) mRNA,
complete cds
Length = 1038
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 329 gtgttccagtagttcttgatctcgttgtctgtcc 296
>emb|BX815211.1|CNS0AAGG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS42ZA11 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1567
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 677 gtgttccagtagttcttgatctcgttgtctgtcc 710
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 60.0 bits (30), Expect = 9e-007
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtccgtcc 828
||||||||||||||||||||||||||||| ||||
Sbjct: 53196 gtgttccagtagttcttgatctcgttgtctgtcc 53163
Score = 56.0 bits (28), Expect = 1e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 799 tccagtagttcttgatctcgttgtccgt 826
||||||||||||||||||||||||||||
Sbjct: 2068276 tccagtagttcttgatctcgttgtccgt 2068303
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 795 gtgttccagtagttcttgatctcgttgtc 823
|||||||| |||||||||||||||||||
Sbjct: 22630254 gtgttccataagttcttgatctcgttgtc 22630226
Score = 42.1 bits (21), Expect = 0.20
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 799 tccagtagttcttgatctcgttgtccgtccgccccgg 835
||||||||||||| |||||||| ||||| || |||||
Sbjct: 16909962 tccagtagttctttatctcgttatccgttcgtcccgg 16909926
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 423,758
Number of Sequences: 1013581
Number of extensions: 423758
Number of successful extensions: 42959
Number of sequences better than 0.5: 225
Number of HSP's better than 0.5 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38512
Number of HSP's gapped (non-prelim): 4441
length of query: 1121
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1101
effective length of database: 888,669,252
effective search space: 978424846452
effective search space used: 978424846452
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)