BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750995.2.1
(729 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV825430.1|AV825430 AV825430 RAFL7 Arabidopsis thaliana ... 155 1e-035
gb|AV554047.1|AV554047 AV554047 Arabidopsis thaliana roots ... 155 1e-035
gb|AY056200.1| Arabidopsis thaliana putative UDP-glucose de... 155 1e-035
emb|CQ805158.1| Sequence 1569 from Patent WO2004035798 155 1e-035
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 155 1e-035
emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome... 155 1e-035
ref|NM_121553.2| Arabidopsis thaliana UDP-glucose 6-dehydro... 155 1e-035
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 155 1e-035
gb|BP796369.1|BP796369 BP796369 RAFL5 Arabidopsis thaliana ... 149 8e-034
gb|BT015794.1| Arabidopsis thaliana At5g15490 mRNA, complet... 147 3e-033
gb|AV830984.1|AV830984 AV830984 RAFL9 Arabidopsis thaliana ... 137 3e-030
gb|BE523262.1|BE523262 M33D7STM Arabidopsis developing seed... 121 2e-025
gb|B74001.1|B74001 T27G24TR TAMU Arabidopsis thaliana genom... 98 3e-018
gb|AQ250999.1|AQ250999 T27L9-Sp6 TAMU Arabidopsis thaliana ... 98 3e-018
gb|CB258220.1|CB258220 40-E011137-014-001-O09-T7R MPIZ-ADIS... 98 3e-018
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 98 3e-018
gb|AY070758.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, ... 98 3e-018
gb|AY143922.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, ... 98 3e-018
gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis th... 98 3e-018
emb|BX814676.1|CNS0AAJL Arabidopsis thaliana Full-length cD... 98 3e-018
ref|NM_102419.3| Arabidopsis thaliana UDP-glucose 6-dehydro... 98 3e-018
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 98 3e-018
gb|AU235500.1|AU235500 AU235500 RAFL14 Arabidopsis thaliana... 92 2e-016
gb|AV551283.1|AV551283 AV551283 Arabidopsis thaliana roots ... 92 2e-016
gb|BT006380.1| Arabidopsis thaliana At5g39320 gene, complet... 92 2e-016
dbj|AB010694.1| Arabidopsis thaliana genomic DNA, chromosom... 92 2e-016
ref|NM_123294.2| Arabidopsis thaliana UDP-glucose 6-dehydro... 92 2e-016
gb|BE524845.1|BE524845 M55A1STM Arabidopsis developing seed... 90 6e-016
gb|AY084436.1| Arabidopsis thaliana clone 108221 mRNA, comp... 90 6e-016
gb|T43738.1|T43738 7001 Lambda-PRL2 Arabidopsis thaliana cD... 84 4e-014
gb|AI994055.1|AI994055 701498370 A. thaliana, Ohio State cl... 84 4e-014
gb|AV825434.1|AV825434 AV825434 RAFL7 Arabidopsis thaliana ... 84 4e-014
gb|AV828797.1|AV828797 AV828797 RAFL9 Arabidopsis thaliana ... 84 4e-014
gb|BX839288.1|BX839288 BX839288 Arabidopsis thaliana Adult ... 84 4e-014
gb|AV439591.1|AV439591 AV439591 Arabidopsis thaliana above-... 84 4e-014
gb|CK121687.1|CK121687 202b23.p1 AtM1 Arabidopsis thaliana ... 84 4e-014
gb|BP796065.1|BP796065 BP796065 RAFL3 Arabidopsis thaliana ... 84 4e-014
gb|BP816992.1|BP816992 BP816992 RAFL19 Arabidopsis thaliana... 84 4e-014
gb|BP830842.1|BP830842 BP830842 RAFL19 Arabidopsis thaliana... 84 4e-014
gb|BP831724.1|BP831724 BP831724 RAFL19 Arabidopsis thaliana... 84 4e-014
gb|BP834485.1|BP834485 BP834485 RAFL19 Arabidopsis thaliana... 84 4e-014
gb|BP862816.1|BP862816 BP862816 RAFL21 Arabidopsis thaliana... 84 4e-014
gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10... 84 4e-014
gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, comple... 84 4e-014
dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosom... 84 4e-014
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 84 4e-014
gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complet... 84 4e-014
ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydro... 84 4e-014
ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehy... 84 4e-014
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 84 4e-014
gb|AV547170.1|AV547170 AV547170 Arabidopsis thaliana roots ... 82 2e-013
gb|AV829402.1|AV829402 AV829402 RAFL9 Arabidopsis thaliana ... 78 2e-012
gb|BP823416.1|BP823416 BP823416 RAFL19 Arabidopsis thaliana... 78 2e-012
gb|BP826658.1|BP826658 BP826658 RAFL19 Arabidopsis thaliana... 78 2e-012
gb|BP833023.1|BP833023 BP833023 RAFL19 Arabidopsis thaliana... 78 2e-012
gb|BP836488.1|BP836488 BP836488 RAFL19 Arabidopsis thaliana... 78 2e-012
gb|BP838181.1|BP838181 BP838181 RAFL19 Arabidopsis thaliana... 78 2e-012
gb|BP840876.1|BP840876 BP840876 RAFL19 Arabidopsis thaliana... 78 2e-012
gb|BP841961.1|BP841961 BP841961 RAFL21 Arabidopsis thaliana... 78 2e-012
gb|BP842827.1|BP842827 BP842827 RAFL21 Arabidopsis thaliana... 78 2e-012
gb|BP844424.1|BP844424 BP844424 RAFL21 Arabidopsis thaliana... 78 2e-012
gb|BP850463.1|BP850463 BP850463 RAFL21 Arabidopsis thaliana... 78 2e-012
gb|BP866742.1|BP866742 BP866742 RAFL21 Arabidopsis thaliana... 78 2e-012
gb|BE524467.1|BE524467 M50D11STM Arabidopsis developing see... 74 4e-011
gb|BP834913.1|BP834913 BP834913 RAFL19 Arabidopsis thaliana... 74 4e-011
gb|BP799718.1|BP799718 BP799718 RAFL14 Arabidopsis thaliana... 72 1e-010
gb|BP850648.1|BP850648 BP850648 RAFL21 Arabidopsis thaliana... 72 1e-010
gb|BP802595.1|BP802595 BP802595 RAFL14 Arabidopsis thaliana... 70 6e-010
gb|BP829854.1|BP829854 BP829854 RAFL19 Arabidopsis thaliana... 70 6e-010
gb|T13906.1|T13906 2071 Lambda-PRL2 Arabidopsis thaliana cD... 68 2e-009
gb|BP830988.1|BP830988 BP830988 RAFL19 Arabidopsis thaliana... 68 2e-009
gb|BP833500.1|BP833500 BP833500 RAFL19 Arabidopsis thaliana... 66 9e-009
gb|BE530483.1|BE530483 M77J01STM Arabidopsis developing see... 64 4e-008
gb|BP862169.1|BP862169 BP862169 RAFL21 Arabidopsis thaliana... 64 4e-008
gb|BP866171.1|BP866171 BP866171 RAFL21 Arabidopsis thaliana... 64 4e-008
gb|BP799299.1|BP799299 BP799299 RAFL14 Arabidopsis thaliana... 62 1e-007
gb|BP834278.1|BP834278 BP834278 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|AV527753.1|AV527753 AV527753 Arabidopsis thaliana aboveg... 60 6e-007
gb|BP834475.1|BP834475 BP834475 RAFL19 Arabidopsis thaliana... 60 6e-007
gb|AV824084.1|AV824084 AV824084 RAFL6 Arabidopsis thaliana ... 58 2e-006
gb|BP851736.1|BP851736 BP851736 RAFL21 Arabidopsis thaliana... 58 2e-006
gb|BP797099.1|BP797099 BP797099 RAFL14 Arabidopsis thaliana... 56 9e-006
gb|H36268.1|H36268 14790 Lambda-PRL2 Arabidopsis thaliana c... 54 3e-005
gb|BP831800.1|BP831800 BP831800 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP811271.1|BP811271 BP811271 RAFL16 Arabidopsis thaliana... 52 1e-004
gb|BP831542.1|BP831542 BP831542 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP822650.1|BP822650 BP822650 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP858740.1|BP858740 BP858740 RAFL21 Arabidopsis thaliana... 48 0.002
gb|N37907.1|N37907 19134 Lambda-PRL2 Arabidopsis thaliana c... 44 0.033
gb|BP817599.1|BP817599 BP817599 RAFL19 Arabidopsis thaliana... 44 0.033
gb|BP847020.1|BP847020 BP847020 RAFL21 Arabidopsis thaliana... 44 0.033
>gb|AV825430.1|AV825430 AV825430 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-09-L22 5',
mRNA sequence
Length = 607
Score = 155 bits (78), Expect = 1e-035
Identities = 228/278 (82%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 245 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 304
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 305 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 364
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 365 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 424
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 425 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 484
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 485 actgttcctgtcaaaaccgcagaggcaattgagaagat 522
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 104 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 163
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 164 gctctaaagtg 174
>gb|AV554047.1|AV554047 AV554047 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ79e02R 5', mRNA sequence
Length = 414
Score = 155 bits (78), Expect = 1e-035
Identities = 228/278 (82%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 117 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 176
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 177 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 236
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 237 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 296
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 297 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 356
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 357 actgttcctgtcaaaaccgcagaggcaattgagaagat 394
Score = 52.0 bits (26), Expect = 1e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 226 ctggctatgtcggtggcccaaccatggctgtcattgccctcaagtg 271
|||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 1 ctggatatgttggtggtccaaccatggctgtcattgctctaaagtg 46
>gb|AY056200.1| Arabidopsis thaliana putative UDP-glucose dehydrogenase (At5g15490)
mRNA, complete cds
Length = 1793
Score = 155 bits (78), Expect = 1e-035
Identities = 228/278 (82%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 244 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 303
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 304 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 363
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 364 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 423
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 424 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 483
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 484 actgttcctgtcaaaaccgcagaggcaattgagaagat 521
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 103 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 162
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 163 gctctaaagtg 173
>emb|CQ805158.1| Sequence 1569 from Patent WO2004035798
Length = 1443
Score = 155 bits (78), Expect = 1e-035
Identities = 228/278 (82%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 142 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 201
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 202 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 261
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 262 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 321
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 322 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 381
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 382 actgttcctgtcaaaaccgcagaggcaattgagaagat 419
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 1 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 60
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 61 gctctaaagtg 71
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 155 bits (78), Expect = 1e-035
Identities = 228/278 (82%)
Strand = Plus / Minus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 4812149 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 4812090
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 4812089 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 4812030
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 4812029 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 4811970
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 4811969 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 4811910
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 4811909 actgttcctgtcaaaaccgcagaggcaattgagaagat 4811872
Score = 91.7 bits (46), Expect = 2e-016
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||||||||| || ||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 14480103 cttggagctgggaaagctgctgatctcacttattgggagagtgctgctcgtatgatcgcg 14480162
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || ||||||||||| ||||| ||||| || || || || || ||||| |||
Sbjct: 14480163 gatgtatcggtttctgacaagattgttgttgagaaatcgactgttccggtgaagacagct 14480222
Query: 603 gaggctattgagaagatcttga 624
|| |||||||||||||| ||||
Sbjct: 14480223 gaagctattgagaagattttga 14480244
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 4812290 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 4812231
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 4812230 gctctaaagtg 4812220
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project)
Length = 90176
Score = 155 bits (78), Expect = 1e-035
Identities = 228/278 (82%)
Strand = Plus / Minus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 34951 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 34892
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 34891 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 34832
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 34831 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 34772
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 34771 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 34712
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 34711 actgttcctgtcaaaaccgcagaggcaattgagaagat 34674
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 35092 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 35033
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 35032 gctctaaagtg 35022
>ref|NM_121553.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G15490 mRNA,
complete cds
Length = 1778
Score = 155 bits (78), Expect = 1e-035
Identities = 228/278 (82%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 244 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 303
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 304 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 363
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 364 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 423
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 424 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 483
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 484 actgttcctgtcaaaaccgcagaggcaattgagaagat 521
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 103 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 162
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 163 gctctaaagtg 173
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 155 bits (78), Expect = 1e-035
Identities = 228/278 (82%)
Strand = Plus / Minus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 5029176 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 5029117
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 5029116 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 5029057
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 5029056 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 5028997
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 5028996 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 5028937
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 5028936 actgttcctgtcaaaaccgcagaggcaattgagaagat 5028899
Score = 91.7 bits (46), Expect = 2e-016
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||||||||| || ||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 15760764 cttggagctgggaaagctgctgatctcacttattgggagagtgctgctcgtatgatcgcg 15760823
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || ||||||||||| ||||| ||||| || || || || || ||||| |||
Sbjct: 15760824 gatgtatcggtttctgacaagattgttgttgagaaatcgactgttccggtgaagacagct 15760883
Query: 603 gaggctattgagaagatcttga 624
|| |||||||||||||| ||||
Sbjct: 15760884 gaagctattgagaagattttga 15760905
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 5029317 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 5029258
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 5029257 gctctaaagtg 5029247
>gb|BP796369.1|BP796369 BP796369 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-04-D22 5',
mRNA sequence
Length = 634
Score = 149 bits (75), Expect = 8e-034
Identities = 227/278 (81%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 246 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 305
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 306 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 365
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 366 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 425
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| |||| ||||| ||
Sbjct: 426 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgntgagaaatca 485
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 486 actgttcctgtcaaaaccgcagaggcaattgagaagat 523
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 105 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 164
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 165 gctctaaagtg 175
>gb|BT015794.1| Arabidopsis thaliana At5g15490 mRNA, complete cds
Length = 1443
Score = 147 bits (74), Expect = 3e-033
Identities = 227/278 (81%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 142 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 201
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 202 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 261
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 262 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 321
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| ||||| || || || |||||||| ||||| ||||| ||
Sbjct: 322 agcgctgctcgtatgattgccgacgtttcggtttccgacaagattgttgttgagaaatca 381
Query: 582 accgtccctgtcaagaccgctgaggctattgagaagat 619
|| || |||||||| ||||| ||||| |||||||||||
Sbjct: 382 actgttcctgtcaaaaccgcagaggcaattgagaagat 419
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 1 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 60
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 61 gctctaaagtg 71
>gb|AV830984.1|AV830984 AV830984 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-81-P17 5',
mRNA sequence
Length = 598
Score = 137 bits (69), Expect = 3e-030
Identities = 227/279 (81%), Gaps = 1/279 (0%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 244 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 303
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 304 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 363
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || ||||||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 364 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 423
Query: 522 agcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaagtcc 581
||||||||||||||||| |||||||| || || |||||||| ||||| ||||| ||
Sbjct: 424 agcgctgctcgtatgattgccgatgtttcggnttccgacaagattgttgttgagaaatca 483
Query: 582 accg-tccctgtcaagaccgctgaggctattgagaagat 619
|| | | |||||||| ||||| |||| |||||||||||
Sbjct: 484 actgtttcctgtcaaaaccgcanaggcaattgagaagat 522
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 103 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 162
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 163 gctctaaagtg 173
>gb|BE523262.1|BE523262 M33D7STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M33D7 5', mRNA sequence
Length = 422
Score = 121 bits (61), Expect = 2e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 459 aacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgg 518
|||||||| || ||||||||||| |||||||||||||| ||||| || | || ||||||
Sbjct: 16 aacacccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgg 75
Query: 519 gagagcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaag 578
|||||||||||||||||||| |||||||| || || |||||||| ||||| |||||
Sbjct: 76 gagagcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaa 135
Query: 579 tccaccgtccctgtcaagaccgctgaggctattgagaagat 619
|| || || |||||||| ||||| ||||| |||||||||||
Sbjct: 136 tcaactgttcctgtcaaaaccgcagaggcaattgagaagat 176
>gb|B74001.1|B74001 T27G24TR TAMU Arabidopsis thaliana genomic clone T27G24, DNA
sequence
Length = 682
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 290 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 231
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 230 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 171
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 170 gaggctattgaaaagat 154
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 572 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 513
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 512 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 469
>gb|AQ250999.1|AQ250999 T27L9-Sp6 TAMU Arabidopsis thaliana genomic clone T27L9, DNA
sequence
Length = 512
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 293 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 234
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 233 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 174
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 173 gaggctattgaaaagat 157
>gb|CB258220.1|CB258220 40-E011137-014-001-O09-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771O091Q 5-PRIME, mRNA sequence
Length = 418
Score = 97.6 bits (49), Expect = 3e-018
Identities = 154/189 (81%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 230 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 289
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 290 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 349
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 521
||||| || || |||||||| |||||||||||||| ||||| || | || |||||||||
Sbjct: 350 accccgactaatacccgtggtcttggagctggcaaagctgcagatttgacttactgggag 409
Query: 522 agcgctgct 530
|||||||||
Sbjct: 410 agcgctgct 418
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 89 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 148
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 149 gctctaaagtg 159
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 9191690 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 9191749
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 9191750 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 9191809
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 9191810 gaggctattgaaaagat 9191826
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 9191408 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 9191467
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 9191468 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 9191511
>gb|AY070758.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds
Length = 1707
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 401 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 460
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 461 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 520
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 521 gaggctattgaaaagat 537
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 119 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 178
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 179 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 222
>gb|AY143922.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds
Length = 1446
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 283 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 342
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 343 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 402
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 403 gaggctattgaaaagat 419
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 1 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 60
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 61 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 104
>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 89473
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 17360 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 17301
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 17300 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 17241
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 17240 gaggctattgaaaagat 17224
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 17642 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 17583
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 17582 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 17539
>emb|BX814676.1|CNS0AAJL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB89ZA07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1649
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 388 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 447
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 448 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 507
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 508 gaggctattgaaaagat 524
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 106 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 165
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 166 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 209
>ref|NM_102419.3| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT1G26570 mRNA,
complete cds
Length = 1712
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 402 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 461
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 462 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 521
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 522 gaggctattgaaaagat 538
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 120 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 179
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 180 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 223
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||||||
Sbjct: 9183070 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgct 9183129
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 9183130 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 9183189
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 9183190 gaggctattgaaaagat 9183206
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 9182788 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 9182847
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 9182848 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 9182891
>gb|AU235500.1|AU235500 AU235500 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-15-K16 5',
mRNA sequence
Length = 574
Score = 91.7 bits (46), Expect = 2e-016
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||||||||| || ||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 355 cttggagctgggaaagctgctgatctcacttattgggagagtgctgctcgtatgatcgcg 414
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || ||||||||||| ||||| ||||| || || || || || ||||| |||
Sbjct: 415 gatgtatcggtttctgacaagattgttgttgagaaatcgactgttccggtgaagacagct 474
Query: 603 gaggctattgagaagatcttga 624
|| |||||||||||||| ||||
Sbjct: 475 gaagctattgagaagattttga 496
>gb|AV551283.1|AV551283 AV551283 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ123f12R 5', mRNA sequence
Length = 399
Score = 91.7 bits (46), Expect = 2e-016
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||||||||| || ||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 119 cttggagctgggaaagctgctgatctcacttattgggagagtgctgctcgtatgatcgcg 178
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || ||||||||||| ||||| ||||| || || || || || ||||| |||
Sbjct: 179 gatgtatcggtttctgacaagattgttgttgagaaatcgactgttccggtgaagacagct 238
Query: 603 gaggctattgagaagatcttga 624
|| |||||||||||||| ||||
Sbjct: 239 gaagctattgagaagattttga 260
>gb|BT006380.1| Arabidopsis thaliana At5g39320 gene, complete cds
Length = 1440
Score = 91.7 bits (46), Expect = 2e-016
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||||||||| || ||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 280 cttggagctgggaaagctgctgatctcacttattgggagagtgctgctcgtatgatcgcg 339
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || ||||||||||| ||||| ||||| || || || || || ||||| |||
Sbjct: 340 gatgtatcggtttctgacaagattgttgttgagaaatcgactgttccggtgaagacagct 399
Query: 603 gaggctattgagaagatcttga 624
|| |||||||||||||| ||||
Sbjct: 400 gaagctattgagaagattttga 421
>dbj|AB010694.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K3
Length = 68889
Score = 91.7 bits (46), Expect = 2e-016
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||||||||| || ||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 68050 cttggagctgggaaagctgctgatctcacttattgggagagtgctgctcgtatgatcgcg 68109
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || ||||||||||| ||||| ||||| || || || || || ||||| |||
Sbjct: 68110 gatgtatcggtttctgacaagattgttgttgagaaatcgactgttccggtgaagacagct 68169
Query: 603 gaggctattgagaagatcttga 624
|| |||||||||||||| ||||
Sbjct: 68170 gaagctattgagaagattttga 68191
>ref|NM_123294.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G39320 mRNA,
complete cds
Length = 1763
Score = 91.7 bits (46), Expect = 2e-016
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||||||||| || ||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 356 cttggagctgggaaagctgctgatctcacttattgggagagtgctgctcgtatgatcgcg 415
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || ||||||||||| ||||| ||||| || || || || || ||||| |||
Sbjct: 416 gatgtatcggtttctgacaagattgttgttgagaaatcgactgttccggtgaagacagct 475
Query: 603 gaggctattgagaagatcttga 624
|| |||||||||||||| ||||
Sbjct: 476 gaagctattgagaagattttga 497
>gb|BE524845.1|BE524845 M55A1STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M55A1 5', mRNA sequence
Length = 416
Score = 89.7 bits (45), Expect = 6e-016
Identities = 132/161 (81%)
Strand = Plus / Plus
Query: 342 ccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttc 401
|||||||| ||||| || || |||||||| || ||||||||| | || | ||| ||||||
Sbjct: 239 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 298
Query: 402 ttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaac 461
|||||||| ||||||||||| || || ||||||||||| | || || || || |||
Sbjct: 299 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 358
Query: 462 acccccaccaagacccgtgggcttggagctggcaaggctgc 502
||||| || ||||||||||| |||||||||||||| |||||
Sbjct: 359 acccctactaagacccgtggtcttggagctggcaaagctgc 399
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 98 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 157
Query: 261 gccctcaagtg 271
|| || |||||
Sbjct: 158 gctctaaagtg 168
>gb|AY084436.1| Arabidopsis thaliana clone 108221 mRNA, complete sequence
Length = 1706
Score = 89.7 bits (45), Expect = 6e-016
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| |||||||| ||||| || || || ||||||||||| |||||||| |||||| |
Sbjct: 400 cttggtgctggcaaagctgctgatcttacttactgggagagtgctgctcggatgatccct 459
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||||||||| ||| ||| |||||||| ||||| ||||| || ||||| | ||| ||
Sbjct: 460 gatgtctccaaatctagcaaaatcgttgttgagaaatccacggttcctgtgaggacagca 519
Query: 603 gaggctattgagaagat 619
||||||||||| |||||
Sbjct: 520 gaggctattgaaaagat 536
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||| || ||
Sbjct: 118 atggtgaagatatgctgcataggagctggttatgtgggtggtccaaccatggcggtgatg 177
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 178 gctcttaagtgtcctgagattgaagtagtcgttgtggatatctc 221
>gb|T43738.1|T43738 7001 Lambda-PRL2 Arabidopsis thaliana cDNA clone 123A3T7, mRNA
sequence
Length = 539
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 41 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 100
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 101 cgtggcaagaaccttttctttagtactgatgttgagaa 138
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 200 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 259
Query: 543 gatgt 547
|||||
Sbjct: 260 gatgt 264
>gb|AI994055.1|AI994055 701498370 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701498370, mRNA sequence
Length = 508
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 41 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 100
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 101 cgtggcaagaaccttttctttagtactgatgttgagaa 138
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 200 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 259
Query: 543 gatgt 547
|||||
Sbjct: 260 gatgt 264
>gb|AV825434.1|AV825434 AV825434 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-09-M15 5',
mRNA sequence
Length = 624
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 188 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 247
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 248 cgtggcaagaaccttttctttagtactgatgttgagaa 285
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 347 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 406
Query: 543 gatgt 547
|||||
Sbjct: 407 gatgt 411
>gb|AV828797.1|AV828797 AV828797 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-33-I02 5',
mRNA sequence
Length = 475
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 191 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 250
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 251 cgtggcaagaaccttttctttagtactgatgttgagaa 288
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 350 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 409
Query: 543 gatgt 547
|||||
Sbjct: 410 gatgt 414
>gb|BX839288.1|BX839288 BX839288 Arabidopsis thaliana Adult vegetative tissue Col-0
Arabidopsis thaliana cDNA clone GSLTLS94ZC07 5PRIM, mRNA
sequence
Length = 523
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 176 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 235
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 236 cgtggcaagaaccttttctttagtactgatgttgagaa 273
Score = 61.9 bits (31), Expect = 1e-007
Identities = 115/143 (80%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 335 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 394
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || || || ||||| || || ||||| || || || || || ||||| |||
Sbjct: 395 gatgtttcggtatcggataagattgtcgttgagaaatcgactgttccggttaagacagct 454
Query: 603 gaggctattgagaagatcttgac 625
|| |||||||||||||| |||||
Sbjct: 455 gaagctattgagaagattttgac 477
Score = 42.1 bits (21), Expect = 0.13
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 198 aagatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtc 257
|||||||||||||| || || || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct: 50 aagatggtgaagatatgttgtattggagctgggtatgttggtggaccaacaatggcagtg 109
Query: 258 attgc 262
|||||
Sbjct: 110 attgc 114
>gb|AV439591.1|AV439591 AV439591 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD06g03_f 3', mRNA
sequence
Length = 625
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 159 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 218
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 219 cgtggcaagaaccttttctttagtactgatgttgagaa 256
Score = 54.0 bits (27), Expect = 3e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 513 tactgggagagcgctgctcgtatgatcgccgatgt 547
||||||||||||||||| ||||||||||| |||||
Sbjct: 348 tactgggagagcgctgcgcgtatgatcgctgatgt 382
>gb|CK121687.1|CK121687 202b23.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B23202
5-PRIME, mRNA sequence
Length = 680
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 148 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 207
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 208 cgtggcaagaaccttttctttagtactgatgttgagaa 245
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 307 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 366
Query: 543 gatgt 547
|||||
Sbjct: 367 gatgt 371
>gb|BP796065.1|BP796065 BP796065 RAFL3 Arabidopsis thaliana cDNA clone RAFL03-07-G14 5',
mRNA sequence
Length = 704
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 159 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 218
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 219 cgtggcaagaaccttttctttagtactgatgttgagaa 256
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 318 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 377
Query: 543 gatgt 547
|||||
Sbjct: 378 gatgt 382
Score = 42.1 bits (21), Expect = 0.13
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 198 aagatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtc 257
|||||||||||||| || || || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct: 32 aagatggtgaagatatgttgtattggagctgggtatgttggtggaccaacaatggcagtg 91
Query: 258 attgc 262
|||||
Sbjct: 92 attgc 96
>gb|BP816992.1|BP816992 BP816992 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-43-K09 5',
mRNA sequence
Length = 424
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 189 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 248
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 249 cgtggcaagaaccttttctttagtactgatgttgagaa 286
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 513 tactgggagagcgctgctcgtatgatcgcc 542
||||||||||||||||| ||||||||||||
Sbjct: 378 tactgggagagcgctgcgcgtatgatcgcc 407
>gb|BP830842.1|BP830842 BP830842 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-86-P20 5',
mRNA sequence
Length = 402
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 189 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 248
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 249 cgtggcaagaaccttttctttagtactgatgttgagaa 286
>gb|BP831724.1|BP831724 BP831724 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-89-P04 5',
mRNA sequence
Length = 388
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 186 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 245
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 246 cgtggcaagaaccttttctttagtactgatgttgagaa 283
>gb|BP834485.1|BP834485 BP834485 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-10-H07 5',
mRNA sequence
Length = 383
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 189 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 248
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 249 cgtggcaagaaccttttctttagtactgatgttgagaa 286
>gb|BP862816.1|BP862816 BP862816 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-64-I06 5',
mRNA sequence
Length = 384
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 187 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 246
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 247 cgtggcaagaaccttttctttagtactgatgttgagaa 284
>gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10_6 mRNA, complete cds
Length = 1793
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 190 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 249
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 250 cgtggcaagaaccttttctttagtactgatgttgagaa 287
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 349 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 408
Query: 543 gatgt 547
|||||
Sbjct: 409 gatgt 413
>gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, complete sequence
Length = 1746
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 190 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 249
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 250 cgtggcaagaaccttttctttagtactgatgttgagaa 287
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 349 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 408
Query: 543 gatgt 547
|||||
Sbjct: 409 gatgt 413
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10
Length = 77589
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 18335 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 18276
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 18275 cgtggcaagaaccttttctttagtactgatgttgagaa 18238
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 18176 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 18117
Query: 543 gatgt 547
|||||
Sbjct: 18116 gatgt 18112
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 11189831 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 11189772
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 11189771 cgtggcaagaaccttttctttagtactgatgttgagaa 11189734
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 11189672 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 11189613
Query: 543 gatgt 547
|||||
Sbjct: 11189612 gatgt 11189608
>gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complete cds
Length = 1486
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 137 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 196
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 197 cgtggcaagaaccttttctttagtactgatgttgagaa 234
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 296 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 355
Query: 543 gatgt 547
|||||
Sbjct: 356 gatgt 360
>ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360
transcript variant AT3G29360.1 mRNA, complete cds
Length = 1793
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 190 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 249
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 250 cgtggcaagaaccttttctttagtactgatgttgagaa 287
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 349 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 408
Query: 543 gatgt 547
|||||
Sbjct: 409 gatgt 413
>ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360
transcript variant AT3G29360.2 mRNA, complete cds
Length = 1790
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 187 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 246
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 247 cgtggcaagaaccttttctttagtactgatgttgagaa 284
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 346 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 405
Query: 543 gatgt 547
|||||
Sbjct: 406 gatgt 410
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 324 tggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgc 383
|||||||| ||||| || ||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 11269931 tggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagcaatgc 11269872
Query: 384 aggggcaggaacctcttcttcagcactgatgttgagaa 421
| |||| |||||| ||||| || ||||||||||||||
Sbjct: 11269871 cgtggcaagaaccttttctttagtactgatgttgagaa 11269834
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 11269772 cttggtgctggtaaagctgcggatcttacgtactgggagagcgctgcgcgtatgatcgct 11269713
Query: 543 gatgt 547
|||||
Sbjct: 11269712 gatgt 11269708
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 265,656
Number of Sequences: 1013581
Number of extensions: 265656
Number of successful extensions: 21294
Number of sequences better than 0.5: 91
Number of HSP's better than 0.5 without gapping: 91
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20359
Number of HSP's gapped (non-prelim): 886
length of query: 729
length of database: 908,940,872
effective HSP length: 20
effective length of query: 709
effective length of database: 888,669,252
effective search space: 630066499668
effective search space used: 630066499668
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)