BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750753.2.1
(1126 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF378862.1|AF378862 Arabidopsis thaliana AT5g62000/mtg10... 58 3e-006
gb|BT000784.1| Arabidopsis thaliana clone RAFL07-10-G12 (R1... 58 3e-006
gb|BT001072.1| Arabidopsis thaliana At5g62000/mtg10_20 mRNA... 58 3e-006
gb|AY669787.1| Arabidopsis thaliana clone C105342 ARF2 (At5... 58 3e-006
dbj|AK221252.1| Arabidopsis thaliana mRNA for ARF1-binding ... 58 3e-006
dbj|AK221254.1| Arabidopsis thaliana mRNA for ARF1-binding ... 58 3e-006
dbj|AK221274.1| Arabidopsis thaliana mRNA for ARF1-binding ... 58 3e-006
dbj|AK221277.1| Arabidopsis thaliana mRNA for ARF1-binding ... 58 3e-006
dbj|AK221282.1| Arabidopsis thaliana mRNA for ARF1-binding ... 58 3e-006
dbj|AK221305.1| Arabidopsis thaliana mRNA for ARF1-binding ... 58 3e-006
emb|CS165494.1| Sequence 2 from Patent WO2005085453 58 3e-006
emb|CS165497.1| Sequence 5 from Patent WO2005085453 58 3e-006
emb|CS165547.1| Sequence 55 from Patent WO2005085453 58 3e-006
emb|CS165548.1| Sequence 56 from Patent WO2005085453 58 3e-006
ref|NM_180913.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 58 3e-006
ref|NM_125593.2| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 58 3e-006
ref|NM_203251.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE ... 58 3e-006
dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosom... 56 1e-005
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 56 1e-005
emb|CS165493.1| Sequence 1 from Patent WO2005085453 56 1e-005
emb|CS165496.1| Sequence 4 from Patent WO2005085453 56 1e-005
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 56 1e-005
gb|BU635530.1|BU635530 024G07 Infected Arabidopsis Leaf Ara... 52 2e-004
gb|DR750436.1|DR750436 56-L022342-065-009-H07-SeLA MPIZ-ADI... 52 2e-004
gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response fa... 52 2e-004
emb|AX507306.1| Sequence 2001 from Patent WO0216655 52 2e-004
gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin res... 52 2e-004
gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11... 52 2e-004
emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cD... 52 2e-004
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 52 2e-004
ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE ... 52 2e-004
ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE ... 52 2e-004
ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPON... 52 2e-004
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 52 2e-004
gb|BP661724.1|BP661724 BP661724 RAFL21 Arabidopsis thaliana... 48 0.003
gb|AQ955227.1|AQ955227 LERAB10TF LERA Arabidopsis thaliana ... 44 0.052
gb|AQ955228.1|AQ955228 LERAB10TR LERA Arabidopsis thaliana ... 44 0.052
gb|CW836310.1|CW836310 ET7435.Ds3.07.28.00.b.546 Arabidopsi... 44 0.052
gb|BE523322.1|BE523322 M34C10STM Arabidopsis developing see... 44 0.052
gb|BE523850.1|BE523850 M42D10STM Arabidopsis developing see... 44 0.052
gb|AY070463.1| Arabidopsis thaliana AT3g61830/F15G16_220 mR... 44 0.052
gb|AF334717.1| Arabidopsis thaliana auxin response factor A... 44 0.052
gb|AY059746.1| Arabidopsis thaliana auxin response factor A... 44 0.052
gb|AY091392.1| Arabidopsis thaliana putative auxin response... 44 0.052
gb|AY133723.1| Arabidopsis thaliana auxin response factor 1... 44 0.052
emb|BX823552.1|CNS0A4QR Arabidopsis thaliana Full-length cD... 44 0.052
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 44 0.052
emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome... 44 0.052
emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome... 44 0.052
ref|NM_116048.2| Arabidopsis thaliana ARF18; transcription ... 44 0.052
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 44 0.052
gb|BX837073.1|BX837073 BX837073 Arabidopsis thaliana Adult ... 42 0.21
>gb|AF378862.1|AF378862 Arabidopsis thaliana AT5g62000/mtg10_20 mRNA, complete cds
Length = 3171
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1127 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1186
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1187 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1246
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1247 tactacaaacccaggac 1263
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 995 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1053
>gb|BT000784.1| Arabidopsis thaliana clone RAFL07-10-G12 (R10939) auxin response
factor (At5g62000) mRNA, complete cds
Length = 3498
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1288 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1347
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1348 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1407
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1408 tactacaaacccaggac 1424
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 1156 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1214
>gb|BT001072.1| Arabidopsis thaliana At5g62000/mtg10_20 mRNA, complete cds
Length = 2037
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 787 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 846
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 847 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 906
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 907 tactacaaacccaggac 923
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 655 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 713
>gb|AY669787.1| Arabidopsis thaliana clone C105342 ARF2 (At5g62000) mRNA, complete
cds
Length = 2772
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 787 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 846
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 847 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 906
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 907 tactacaaacccaggac 923
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 655 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 713
>dbj|AK221252.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-07-O11
Length = 3317
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1125 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1184
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1185 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1244
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1245 tactacaaacccaggac 1261
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 993 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1051
>dbj|AK221254.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-09-L23
Length = 3317
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1125 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1184
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1185 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1244
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1245 tactacaaacccaggac 1261
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 993 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1051
>dbj|AK221274.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-16-M02
Length = 3317
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1125 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1184
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1185 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1244
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1245 tactacaaacccaggac 1261
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 993 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1051
>dbj|AK221277.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-18-M11
Length = 3316
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1077 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1136
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1137 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1196
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1197 tactacaaacccaggac 1213
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 945 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1003
>dbj|AK221282.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-19-K22
Length = 3275
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1075 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1134
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1135 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1194
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1195 tactacaaacccaggac 1211
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 943 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1001
>dbj|AK221305.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds,
clone: RAFL24-31-F22
Length = 3335
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1096 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1155
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1156 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1215
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1216 tactacaaacccaggac 1232
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 964 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1022
>emb|CS165494.1| Sequence 2 from Patent WO2005085453
Length = 3384
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1162 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1221
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1222 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1281
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1282 tactacaaacccaggac 1298
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 1030 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1088
>emb|CS165497.1| Sequence 5 from Patent WO2005085453
Length = 2576
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 783 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 842
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 843 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 902
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 903 tactacaaacccaggac 919
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 651 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 709
>emb|CS165547.1| Sequence 55 from Patent WO2005085453
Length = 2580
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 787 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 846
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 847 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 906
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 907 tactacaaacccaggac 923
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 655 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 713
>emb|CS165548.1| Sequence 56 from Patent WO2005085453
Length = 2576
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 783 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 842
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 843 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 902
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 903 tactacaaacccaggac 919
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 651 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 709
>ref|NM_180913.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription
factor AT5G62000 (ARF2) transcript variant AT5G62000.1
mRNA, complete cds
Length = 3513
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1288 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1347
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1348 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1407
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1408 tactacaaacccaggac 1424
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 1156 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1214
>ref|NM_125593.2| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription
factor AT5G62000 (ARF2) transcript variant AT5G62000.2
mRNA, complete cds
Length = 3384
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1162 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1221
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1222 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1281
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1282 tactacaaacccaggac 1298
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 1030 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1088
>ref|NM_203251.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2) AT5G62000 (ARF2)
transcript variant AT5G62000.3 mRNA, complete cds
Length = 3387
Score = 58.0 bits (29), Expect = 3e-006
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 1162 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 1221
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 1222 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 1281
Query: 476 tactacaagcctaggac 492
|||||||| || |||||
Sbjct: 1282 tactacaaacccaggac 1298
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||| | ||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 1030 atattccggggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 1088
>dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTG10
Length = 81284
Score = 56.0 bits (28), Expect = 1e-005
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 15047 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 15106
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 15107 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 15166
Query: 476 tactacaa 483
||||||||
Sbjct: 15167 tactacaa 15174
Score = 46.1 bits (23), Expect = 0.013
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 14844 aggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 14894
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 56.0 bits (28), Expect = 1e-005
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 22097626 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 22097685
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 22097686 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 22097745
Query: 476 tactacaa 483
||||||||
Sbjct: 22097746 tactacaa 22097753
Score = 46.1 bits (23), Expect = 0.013
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 22097423 aggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 22097473
>emb|CS165493.1| Sequence 1 from Patent WO2005085453
Length = 8718
Score = 56.0 bits (28), Expect = 1e-005
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 5826 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 5885
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 5886 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 5945
Query: 476 tactacaa 483
||||||||
Sbjct: 5946 tactacaa 5953
Score = 46.1 bits (23), Expect = 0.013
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 5623 aggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 5673
>emb|CS165496.1| Sequence 4 from Patent WO2005085453
Length = 8718
Score = 56.0 bits (28), Expect = 1e-005
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 5826 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 5885
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 5886 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 5945
Query: 476 tactacaa 483
||||||||
Sbjct: 5946 tactacaa 5953
Score = 46.1 bits (23), Expect = 0.013
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 5623 aggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 5673
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 56.0 bits (28), Expect = 1e-005
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 356 aggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatg 415
|||||||| ||| | || |||| ||| || || ||||| || ||||| ||||| ||||||
Sbjct: 24929539 aggcgtgcgatgcgacaacaaggaaacgtgccgtcttctgttatatctagccatagcatg 24929598
Query: 416 catcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtc 475
|||||||| || || || || ||||||||||| || || ||||| |||||||| |||
Sbjct: 24929599 catcttggagtactggccaccgcatggcatgccatttcaacagggactatgtttacagtc 24929658
Query: 476 tactacaa 483
||||||||
Sbjct: 24929659 tactacaa 24929666
Score = 46.1 bits (23), Expect = 0.013
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 232 aggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttag 282
|||||||||||| |||||| | | |||||||| |||||||| ||||||||
Sbjct: 24929336 aggtcaaccacggaggcatttgctacagagtgggtggagtgtgtttgttag 24929386
>gb|BU635530.1|BU635530 024G07 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 725
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 28 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 77
>gb|DR750436.1|DR750436 56-L022342-065-009-H07-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-H07, mRNA sequence
Length = 874
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 482 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 531
>gb|U83245.1|ATU83245 Arabidopsis thaliana auxin response factor 1 (ARF1) mRNA, complete
cds
Length = 2332
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 514 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 563
>emb|AX507306.1| Sequence 2001 from Patent WO0216655
Length = 1998
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 400 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 449
>gb|BT002748.1| Arabidopsis thaliana clone C105458 auxin response factor 1
(At1g59750) mRNA, complete cds
Length = 2029
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 400 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 449
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete
sequence
Length = 144422
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 47321 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 47370
>emb|BX815613.1|CNS0ADXB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS78ZB02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2327
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 514 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 563
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 6222793 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 6222842
>ref|NM_104668.2| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.1
mRNA, complete cds
Length = 2470
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 652 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 701
>ref|NM_179499.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.2
mRNA, complete cds
Length = 2452
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 652 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 701
>ref|NM_001036131.1| Arabidopsis thaliana ARF1 (AUXIN RESPONSE FACTOR 1); transcription
factor AT1G59750 (ARF1) transcript variant AT1G59750.3
mRNA, complete cds
Length = 2290
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 452 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 501
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| |||||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 21985142 agcacacatggtggcttctcggtgctacggagacatgcagatgattgtct 21985191
>gb|BP661724.1|BP661724 BP661724 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-08-M17 3',
mRNA sequence
Length = 434
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 582 gtttaaggtgaagaggctccagaacaaaggtt 613
||||||||||||||||||| ||||| ||||||
Sbjct: 337 gtttaaggtgaagaggctcaagaacgaaggtt 306
>gb|AQ955227.1|AQ955227 LERAB10TF LERA Arabidopsis thaliana genomic clone LERAB10, DNA
sequence
Length = 126
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 14 gatacaagcactcatggtggattctc 39
>gb|AQ955228.1|AQ955228 LERAB10TR LERA Arabidopsis thaliana genomic clone LERAB10, DNA
sequence
Length = 783
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 577 gatacaagcactcatggtggattctc 552
>gb|CW836310.1|CW836310 ET7435.Ds3.07.28.00.b.546 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET7435, DNA sequence
Length = 546
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 128 gatacaagcactcatggtggattctc 103
>gb|BE523322.1|BE523322 M34C10STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M34C10 5', mRNA sequence
Length = 331
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 149 gatacaagcactcatggtggattctc 174
>gb|BE523850.1|BE523850 M42D10STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M42D10 5', mRNA sequence
Length = 384
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 149 gatacaagcactcatggtggattctc 174
>gb|AY070463.1| Arabidopsis thaliana AT3g61830/F15G16_220 mRNA, complete cds
Length = 2331
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 691 gatacaagcactcatggtggattctc 716
>gb|AF334717.1| Arabidopsis thaliana auxin response factor ARF18 (At3g61830) mRNA,
complete cds
Length = 1809
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 406 gatacaagcactcatggtggattctc 431
>gb|AY059746.1| Arabidopsis thaliana auxin response factor ARF18 (At3g61830) mRNA,
complete cds
Length = 2307
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 626 gatacaagcactcatggtggattctc 651
>gb|AY091392.1| Arabidopsis thaliana putative auxin response factor protein
(At3g61830) mRNA, complete cds
Length = 1840
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 406 gatacaagcactcatggtggattctc 431
>gb|AY133723.1| Arabidopsis thaliana auxin response factor 1 (At1g59750) mRNA,
complete cds
Length = 2464
Score = 44.1 bits (22), Expect = 0.052
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 89 agcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtct 138
||||| || ||||| ||||||||||| ||| | ||||||||||| |||||
Sbjct: 654 agcacacaaggtggcttctcggtgctacggagacatgcagatgattgtct 703
>emb|BX823552.1|CNS0A4QR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS50ZC04 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2115
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 523 gatacaagcactcatggtggattctc 548
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 22847365 gatacaagcactcatggtggattctc 22847390
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16
Length = 104868
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 100451 gatacaagcactcatggtggattctc 100476
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14
Length = 142001
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 51763 gatacaagcactcatggtggattctc 51788
>ref|NM_116048.2| Arabidopsis thaliana ARF18; transcription factor AT3G61830 (ARF18)
mRNA, complete cds
Length = 2347
Score = 44.1 bits (22), Expect = 0.052
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 gataccagcactcatggtggattctc 108
||||| ||||||||||||||||||||
Sbjct: 688 gatacaagcactcatggtggattctc 713
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 484,712
Number of Sequences: 1013581
Number of extensions: 484712
Number of successful extensions: 33268
Number of sequences better than 0.5: 52
Number of HSP's better than 0.5 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32175
Number of HSP's gapped (non-prelim): 1071
length of query: 1126
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1106
effective length of database: 888,669,252
effective search space: 982868192712
effective search space used: 982868192712
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)