BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619548.2.1
(691 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA042212.1|AA042212 24533 CD4-13 Arabidopsis thaliana cD... 70 6e-010
gb|AI993586.1|AI993586 701496688 A. thaliana, Ohio State cl... 70 6e-010
gb|AV821743.1|AV821743 AV821743 RAFL4 Arabidopsis thaliana ... 70 6e-010
gb|CB264066.1|CB264066 95-E013840-035-001-M23-T7R MPIZ-ADIS... 70 6e-010
gb|BP796437.1|BP796437 BP796437 RAFL5 Arabidopsis thaliana ... 70 6e-010
gb|AY042872.1| Arabidopsis thaliana ribosomal protein L32 (... 70 6e-010
gb|AY052193.1| Arabidopsis thaliana AT5g46430/K11I1_2 mRNA,... 70 6e-010
gb|AF446871.1|AF446871 Arabidopsis thaliana AT5g46430/K11I1... 70 6e-010
gb|BT002551.1| Arabidopsis thaliana ribosomal protein L32 (... 70 6e-010
ref|NM_180811.1| Arabidopsis thaliana structural constituen... 70 6e-010
ref|NM_124013.2| Arabidopsis thaliana structural constituen... 70 6e-010
gb|BP866168.1|BP866168 BP866168 RAFL21 Arabidopsis thaliana... 68 2e-009
gb|BE037666.1|BE037666 AA02E06 AA Arabidopsis thaliana cDNA... 66 9e-009
gb|AV786726.1|AV786726 AV786726 RAFL6 Arabidopsis thaliana ... 66 9e-009
gb|AV786750.1|AV786750 AV786750 RAFL6 Arabidopsis thaliana ... 66 9e-009
gb|AV787052.1|AV787052 AV787052 RAFL6 Arabidopsis thaliana ... 66 9e-009
gb|AV790705.1|AV790705 AV790705 RAFL6 Arabidopsis thaliana ... 66 9e-009
gb|AV801846.1|AV801846 AV801846 RAFL9 Arabidopsis thaliana ... 66 9e-009
gb|AV802292.1|AV802292 AV802292 RAFL9 Arabidopsis thaliana ... 66 9e-009
gb|AV806261.1|AV806261 AV806261 RAFL9 Arabidopsis thaliana ... 66 9e-009
gb|AV807145.1|AV807145 AV807145 RAFL9 Arabidopsis thaliana ... 66 9e-009
gb|AV828561.1|AV828561 AV828561 RAFL9 Arabidopsis thaliana ... 66 9e-009
gb|CB262134.1|CB262134 73-E8879-008-014-A20-pBl2 MPIZ-ADIS-... 66 9e-009
gb|CB264390.1|CB264390 66-E015022-035-004-C18-T7R MPIZ-ADIS... 66 9e-009
gb|CF652437.1|CF652437 55-L020524-066-003-M14-SP6P MPIZ-ADI... 66 9e-009
gb|AV533831.1|AV533831 AV533831 Arabidopsis thaliana flower... 66 9e-009
gb|AV534771.1|AV534771 AV534771 Arabidopsis thaliana flower... 66 9e-009
gb|CK118688.1|CK118688 216h22.p1 AtM1 Arabidopsis thaliana ... 66 9e-009
gb|CK118706.1|CK118706 216e01.p1 AtM1 Arabidopsis thaliana ... 66 9e-009
gb|BP571598.1|BP571598 BP571598 RAFL14 Arabidopsis thaliana... 66 9e-009
gb|BP573142.1|BP573142 BP573142 RAFL14 Arabidopsis thaliana... 66 9e-009
gb|BP583990.1|BP583990 BP583990 RAFL14 Arabidopsis thaliana... 66 9e-009
gb|BP587278.1|BP587278 BP587278 RAFL15 Arabidopsis thaliana... 66 9e-009
gb|BP587869.1|BP587869 BP587869 RAFL15 Arabidopsis thaliana... 66 9e-009
gb|BP588245.1|BP588245 BP588245 RAFL15 Arabidopsis thaliana... 66 9e-009
gb|BP591211.1|BP591211 BP591211 RAFL15 Arabidopsis thaliana... 66 9e-009
gb|BP613996.1|BP613996 BP613996 RAFL16 Arabidopsis thaliana... 66 9e-009
gb|BP622441.1|BP622441 BP622441 RAFL17 Arabidopsis thaliana... 66 9e-009
gb|BP624419.1|BP624419 BP624419 RAFL17 Arabidopsis thaliana... 66 9e-009
gb|BP632572.1|BP632572 BP632572 RAFL17 Arabidopsis thaliana... 66 9e-009
gb|BP635838.1|BP635838 BP635838 RAFL18 Arabidopsis thaliana... 66 9e-009
gb|BP638611.1|BP638611 BP638611 RAFL19 Arabidopsis thaliana... 66 9e-009
gb|BP644518.1|BP644518 BP644518 RAFL19 Arabidopsis thaliana... 66 9e-009
gb|BP645173.1|BP645173 BP645173 RAFL19 Arabidopsis thaliana... 66 9e-009
gb|BP661036.1|BP661036 BP661036 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP666687.1|BP666687 BP666687 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP666814.1|BP666814 BP666814 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP780606.1|BP780606 BP780606 RAFL7 Arabidopsis thaliana ... 66 9e-009
gb|BP791848.1|BP791848 BP791848 RAFL7 Arabidopsis thaliana ... 66 9e-009
gb|BP797201.1|BP797201 BP797201 RAFL14 Arabidopsis thaliana... 66 9e-009
gb|BP813684.1|BP813684 BP813684 RAFL19 Arabidopsis thaliana... 66 9e-009
gb|BP815143.1|BP815143 BP815143 RAFL19 Arabidopsis thaliana... 66 9e-009
gb|BP843527.1|BP843527 BP843527 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP845385.1|BP845385 BP845385 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP853468.1|BP853468 BP853468 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP854497.1|BP854497 BP854497 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP859845.1|BP859845 BP859845 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP863999.1|BP863999 BP863999 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|Z17739.1|Z17739 ATTS0313 Gif-SeedA+B Arabidopsis thalian... 66 9e-009
gb|AY057566.1| Arabidopsis thaliana AT4g18100/F15J5_70 mRNA... 66 9e-009
gb|AY072399.1| Arabidopsis thaliana ribosomal protein L32 -... 66 9e-009
gb|BT000235.1| Arabidopsis thaliana ribosomal protein L32 -... 66 9e-009
gb|AY086736.1| Arabidopsis thaliana clone 271605 mRNA, comp... 66 9e-009
emb|BX828680.1|CNS0A3L6 Arabidopsis thaliana Full-length cD... 66 9e-009
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 66 9e-009
emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome ... 66 9e-009
emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosom... 66 9e-009
emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosom... 66 9e-009
ref|NM_117920.2| Arabidopsis thaliana structural constituen... 66 9e-009
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 66 9e-009
gb|AV532744.1|AV532744 AV532744 Arabidopsis thaliana flower... 64 3e-008
gb|BP576270.1|BP576270 BP576270 RAFL14 Arabidopsis thaliana... 64 3e-008
gb|T22115.1|T22115 4123 Lambda-PRL2 Arabidopsis thaliana cD... 62 1e-007
gb|AV829601.1|AV829601 AV829601 RAFL9 Arabidopsis thaliana ... 62 1e-007
gb|BP574037.1|BP574037 BP574037 RAFL14 Arabidopsis thaliana... 62 1e-007
gb|BP841891.1|BP841891 BP841891 RAFL21 Arabidopsis thaliana... 62 1e-007
gb|T22824.1|T22824 4832 Lambda-PRL2 Arabidopsis thaliana cD... 60 5e-007
gb|BP563616.1|BP563616 BP563616 RAFL14 Arabidopsis thaliana... 58 2e-006
gb|BP654949.1|BP654949 BP654949 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|BP858054.1|BP858054 BP858054 RAFL21 Arabidopsis thaliana... 58 2e-006
gb|T42610.1|T42610 5873 Lambda-PRL2 Arabidopsis thaliana cD... 56 8e-006
gb|BP585521.1|BP585521 BP585521 RAFL15 Arabidopsis thaliana... 56 8e-006
gb|BP813243.1|BP813243 BP813243 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP848559.1|BP848559 BP848559 RAFL21 Arabidopsis thaliana... 56 8e-006
gb|BP797175.1|BP797175 BP797175 RAFL14 Arabidopsis thaliana... 54 3e-005
gb|BP814812.1|BP814812 BP814812 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP860989.1|BP860989 BP860989 RAFL21 Arabidopsis thaliana... 54 3e-005
emb|BX830633.1|CNS0A1Y2 Arabidopsis thaliana Full-length cD... 54 3e-005
gb|AV787800.1|AV787800 AV787800 RAFL6 Arabidopsis thaliana ... 52 1e-004
gb|BP578691.1|BP578691 BP578691 RAFL14 Arabidopsis thaliana... 52 1e-004
gb|BP649128.1|BP649128 BP649128 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP654761.1|BP654761 BP654761 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP814162.1|BP814162 BP814162 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP824441.1|BP824441 BP824441 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|BP827596.1|BP827596 BP827596 RAFL19 Arabidopsis thaliana... 52 1e-004
gb|AV807018.1|AV807018 AV807018 RAFL9 Arabidopsis thaliana ... 50 5e-004
gb|AV824803.1|AV824803 AV824803 RAFL6 Arabidopsis thaliana ... 50 5e-004
gb|BP566544.1|BP566544 BP566544 RAFL14 Arabidopsis thaliana... 50 5e-004
gb|BP578736.1|BP578736 BP578736 RAFL14 Arabidopsis thaliana... 50 5e-004
gb|BP600239.1|BP600239 BP600239 RAFL16 Arabidopsis thaliana... 50 5e-004
gb|BP621953.1|BP621953 BP621953 RAFL17 Arabidopsis thaliana... 50 5e-004
gb|BP669539.1|BP669539 BP669539 RAFL21 Arabidopsis thaliana... 50 5e-004
dbj|AB019223.1| Arabidopsis thaliana genomic DNA, chromosom... 50 5e-004
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 50 5e-004
gb|R65493.1|R65493 13997 Lambda-PRL2 Arabidopsis thaliana c... 48 0.002
gb|BP629325.1|BP629325 BP629325 RAFL17 Arabidopsis thaliana... 48 0.002
gb|BP811694.1|BP811694 BP811694 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP818970.1|BP818970 BP818970 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP652533.1|BP652533 BP652533 RAFL19 Arabidopsis thaliana... 44 0.032
gb|BP655915.1|BP655915 BP655915 RAFL19 Arabidopsis thaliana... 44 0.032
gb|BP659246.1|BP659246 BP659246 RAFL19 Arabidopsis thaliana... 44 0.032
gb|BP817312.1|BP817312 BP817312 RAFL19 Arabidopsis thaliana... 44 0.032
emb|AL948302.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.12
emb|AL949260.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.12
gb|Z33678.1|Z33678 ATTS2769 Strasbourg-A Arabidopsis thalia... 42 0.12
gb|AV825073.1|AV825073 AV825073 RAFL6 Arabidopsis thaliana ... 42 0.12
gb|AU235889.1|AU235889 AU235889 RAFL14 Arabidopsis thaliana... 42 0.12
gb|CB259727.1|CB259727 29-E011176-013-009-I07-T7R MPIZ-ADIS... 42 0.12
gb|CB261633.1|CB261633 92-E8977-008-017-H24-pBl2 MPIZ-ADIS-... 42 0.12
gb|CB265163.1|CB265163 05-E015021-035-004-I01-T7R MPIZ-ADIS... 42 0.12
gb|CF651522.1|CF651522 76-E009213w-013-001-G19-T7R MPIZ-ADI... 42 0.12
gb|AV440407.1|AV440407 AV440407 Arabidopsis thaliana above-... 42 0.12
gb|AV526639.1|AV526639 AV526639 Arabidopsis thaliana aboveg... 42 0.12
gb|AV554682.1|AV554682 AV554682 Arabidopsis thaliana roots ... 42 0.12
gb|BP632772.1|BP632772 BP632772 RAFL17 Arabidopsis thaliana... 42 0.12
gb|BP858964.1|BP858964 BP858964 RAFL21 Arabidopsis thaliana... 42 0.12
gb|BT004610.1| Arabidopsis thaliana At4g18070 gene, complet... 42 0.12
gb|AY088217.1| Arabidopsis thaliana clone 4345 mRNA, comple... 42 0.12
gb|AY063879.1| Arabidopsis thaliana unknown protein (At4g18... 42 0.12
emb|BX827594.1|CNS0A2W1 Arabidopsis thaliana Full-length cD... 42 0.12
emb|BX828252.1|CNS0A2ZU Arabidopsis thaliana Full-length cD... 42 0.12
ref|NM_117917.1| Arabidopsis thaliana unknown protein AT4G1... 42 0.12
ref|NM_179074.2| Arabidopsis thaliana unknown protein AT4G1... 42 0.12
ref|NM_001036582.1| Arabidopsis thaliana unknown protein AT... 42 0.12
ref|NM_001036583.1| Arabidopsis thaliana unknown protein AT... 42 0.12
gb|T42519.1|T42519 5782 Lambda-PRL2 Arabidopsis thaliana cD... 40 0.49
gb|BP627549.1|BP627549 BP627549 RAFL17 Arabidopsis thaliana... 40 0.49
gb|BP662964.1|BP662964 BP662964 RAFL21 Arabidopsis thaliana... 40 0.49
gb|BP848699.1|BP848699 BP848699 RAFL21 Arabidopsis thaliana... 40 0.49
>gb|AA042212.1|AA042212 24533 CD4-13 Arabidopsis thaliana cDNA clone E4D9T7, mRNA sequence
Length = 515
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 83 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 142
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 143 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 202
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 203 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 262
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 263 gacttactgtgcagagattgctcacaa 289
>gb|AI993586.1|AI993586 701496688 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701496688, mRNA sequence
Length = 445
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 128 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 187
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 188 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 247
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 248 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 307
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 308 gacttactgtgcagagattgctcacaa 334
>gb|AV821743.1|AV821743 AV821743 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-15-O08 5',
mRNA sequence
Length = 602
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 136 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 195
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 196 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 255
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 256 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 315
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 316 gacttactgtgcagagattgctcacaa 342
>gb|CB264066.1|CB264066 95-E013840-035-001-M23-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000M231Q 5-PRIME, mRNA sequence
Length = 509
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 121 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 180
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 181 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 240
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 241 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 300
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 301 gacttactgtgcagagattgctcacaa 327
>gb|BP796437.1|BP796437 BP796437 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-M06 5',
mRNA sequence
Length = 660
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 147 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 206
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 207 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 266
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 267 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 326
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 327 gacttactgtgcagagattgctcacaa 353
>gb|AY042872.1| Arabidopsis thaliana ribosomal protein L32 (K11I1.2) mRNA, complete
cds
Length = 602
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 138 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 197
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 198 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 257
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 258 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 317
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 318 gacttactgtgcagagattgctcacaa 344
>gb|AY052193.1| Arabidopsis thaliana AT5g46430/K11I1_2 mRNA, complete cds
Length = 609
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 142 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 201
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 202 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 261
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 262 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 321
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 322 gacttactgtgcagagattgctcacaa 348
>gb|AF446871.1|AF446871 Arabidopsis thaliana AT5g46430/K11I1_2 mRNA, complete cds
Length = 402
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 93 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 152
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 153 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 212
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 213 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 272
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 273 gacttactgtgcagagattgctcacaa 299
>gb|BT002551.1| Arabidopsis thaliana ribosomal protein L32 (At5g46430) mRNA,
complete cds
Length = 506
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 93 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 152
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 153 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 212
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 213 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 272
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 273 gacttactgtgcagagattgctcacaa 299
>ref|NM_180811.1| Arabidopsis thaliana structural constituent of ribosome AT5G46430
transcript variant AT5G46430.1 mRNA, complete cds
Length = 602
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 138 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 197
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 198 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 257
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 258 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 317
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 318 gacttactgtgcagagattgctcacaa 344
>ref|NM_124013.2| Arabidopsis thaliana structural constituent of ribosome AT5G46430
transcript variant AT5G46430.2 mRNA, complete cds
Length = 606
Score = 69.9 bits (35), Expect = 6e-010
Identities = 164/207 (79%)
Strand = Plus / Plus
Query: 154 aagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcac 213
||||||| | ||||| |||||||| |||||||| || || | ||||||||||| |||
Sbjct: 142 aagctggaggaggcctaagggtattgactcccgggtgagaagaaagttcaagggtgtcac 201
Query: 214 cttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaa 273
|||||||||||| | || || || || || ||||||||| | |||||||| || ||
Sbjct: 202 cttgatgcccaatgttggttacggatctgataagaagacccgccactacctcccaaatgg 261
Query: 274 gttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacag 333
||||| ||||| |||||||||| ||| ||||| ||||| || |||||||||||||
Sbjct: 262 attcaagaagttcattgttcacaacacctctgagctcgagctactcatgatgcacaacag 321
Query: 334 gacttactgcgctgagatcgcccacaa 360
||||||||| || ||||| || |||||
Sbjct: 322 gacttactgtgcagagattgctcacaa 348
>gb|BP866168.1|BP866168 BP866168 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-76-M01 5',
mRNA sequence
Length = 398
Score = 67.9 bits (34), Expect = 2e-009
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccacc 370
|||||||||||||||||||||| |||||||| || |||||||| ||||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccacc 342
>gb|BE037666.1|BE037666 AA02E06 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l32-like protein, mRNA sequence
Length = 571
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 290 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 338
>gb|AV786726.1|AV786726 AV786726 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-72-J18 3',
mRNA sequence
Length = 394
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 305 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 257
>gb|AV786750.1|AV786750 AV786750 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-72-L02 3',
mRNA sequence
Length = 425
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 312 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 264
>gb|AV787052.1|AV787052 AV787052 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-O04 3',
mRNA sequence
Length = 397
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 299 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 251
>gb|AV790705.1|AV790705 AV790705 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-89-N17 3',
mRNA sequence
Length = 426
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 245
>gb|AV801846.1|AV801846 AV801846 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-29-M11 3',
mRNA sequence
Length = 398
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 292 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 244
>gb|AV802292.1|AV802292 AV802292 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-31-G12 3',
mRNA sequence
Length = 417
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 292 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 244
>gb|AV806261.1|AV806261 AV806261 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-45-O10 3',
mRNA sequence
Length = 405
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 339 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 291
>gb|AV807145.1|AV807145 AV807145 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-49-E18 3',
mRNA sequence
Length = 439
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 299 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 251
>gb|AV828561.1|AV828561 AV828561 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-29-M11 5',
mRNA sequence
Length = 579
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 303 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 351
>gb|CB262134.1|CB262134 73-E8879-008-014-A20-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767A2014Q 5-PRIME, mRNA sequence
Length = 424
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 128 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 176
>gb|CB264390.1|CB264390 66-E015022-035-004-C18-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000C184Q 5-PRIME, mRNA sequence
Length = 609
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 283 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 331
>gb|CF652437.1|CF652437 55-L020524-066-003-M14-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001M143Q 5-PRIME, mRNA sequence
Length = 656
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 288 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 336
>gb|AV533831.1|AV533831 AV533831 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB068f12F 3', mRNA sequence
Length = 477
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 256 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 304
>gb|AV534771.1|AV534771 AV534771 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB085g02F 3', mRNA sequence
Length = 413
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 294 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 246
>gb|CK118688.1|CK118688 216h22.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H22216
5-PRIME, mRNA sequence
Length = 562
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 283 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 331
>gb|CK118706.1|CK118706 216e01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011E01216
5-PRIME, mRNA sequence
Length = 447
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 283 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 331
>gb|BP571598.1|BP571598 BP571598 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-N22 3',
mRNA sequence
Length = 450
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 245
>gb|BP573142.1|BP573142 BP573142 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-83-B17 3',
mRNA sequence
Length = 442
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 245
>gb|BP583990.1|BP583990 BP583990 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-G02 3',
mRNA sequence
Length = 418
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 245
>gb|BP587278.1|BP587278 BP587278 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-41-O06 3',
mRNA sequence
Length = 429
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 245
>gb|BP587869.1|BP587869 BP587869 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-44-D07 3',
mRNA sequence
Length = 416
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 245
>gb|BP588245.1|BP588245 BP588245 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-45-J15 3',
mRNA sequence
Length = 428
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 316 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 268
>gb|BP591211.1|BP591211 BP591211 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-13-N03 3',
mRNA sequence
Length = 428
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 245
>gb|BP613996.1|BP613996 BP613996 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-95-D11 3',
mRNA sequence
Length = 424
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 307 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 259
>gb|BP622441.1|BP622441 BP622441 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-03-D17 3',
mRNA sequence
Length = 367
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 292 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 244
>gb|BP624419.1|BP624419 BP624419 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-40-C23 3',
mRNA sequence
Length = 431
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 304 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 256
>gb|BP632572.1|BP632572 BP632572 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-27-J24 3',
mRNA sequence
Length = 387
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 293 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 245
>gb|BP635838.1|BP635838 BP635838 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-02-H14 3',
mRNA sequence
Length = 455
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 292 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 244
>gb|BP638611.1|BP638611 BP638611 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-44-D10 3',
mRNA sequence
Length = 397
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 377 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 329
>gb|BP644518.1|BP644518 BP644518 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-65-L16 3',
mRNA sequence
Length = 420
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 378 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 330
>gb|BP645173.1|BP645173 BP645173 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-67-O12 3',
mRNA sequence
Length = 412
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 305 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 257
>gb|BP661036.1|BP661036 BP661036 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-04-F16 3',
mRNA sequence
Length = 394
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 300 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 252
>gb|BP666687.1|BP666687 BP666687 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-20-J12 3',
mRNA sequence
Length = 406
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 270 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 222
>gb|BP666814.1|BP666814 BP666814 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-21-A13 3',
mRNA sequence
Length = 435
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 299 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 251
>gb|BP780606.1|BP780606 BP780606 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-73-K24 3',
mRNA sequence
Length = 386
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 305 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 257
>gb|BP791848.1|BP791848 BP791848 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-49-D17 3',
mRNA sequence
Length = 403
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 286 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 238
>gb|BP797201.1|BP797201 BP797201 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-02-H20 5',
mRNA sequence
Length = 408
Score = 65.9 bits (33), Expect = 9e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccac 369
|||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 308 tgatgcacaacaggacttactgtgctgagattgctcacaacgtctccac 356
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 286,876
Number of Sequences: 1013581
Number of extensions: 286876
Number of successful extensions: 21497
Number of sequences better than 0.5: 139
Number of HSP's better than 0.5 without gapping: 136
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 20910
Number of HSP's gapped (non-prelim): 575
length of query: 691
length of database: 908,940,872
effective HSP length: 20
effective length of query: 671
effective length of database: 888,669,252
effective search space: 596297068092
effective search space used: 596297068092
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)