BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542097.2.1
(887 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI996156.1|AI996156 701550262 A. thaliana, Columbia Col-... 58 3e-006
gb|AV824800.1|AV824800 AV824800 RAFL6 Arabidopsis thaliana ... 58 3e-006
gb|CF652298.1|CF652298 46-L020577-066-004-K11-SP6P MPIZ-ADI... 58 3e-006
gb|CD531101.1|CD531101 09H10 Arabidopsis Leaf Senescence Li... 58 3e-006
gb|BP596405.1|BP596405 BP596405 RAFL15 Arabidopsis thaliana... 58 3e-006
gb|BP812690.1|BP812690 BP812690 RAFL19 Arabidopsis thaliana... 58 3e-006
gb|BP824600.1|BP824600 BP824600 RAFL19 Arabidopsis thaliana... 58 3e-006
gb|AF412092.1|AF412092 Arabidopsis thaliana At1g08880/F7G19... 58 3e-006
gb|AY093975.1| Arabidopsis thaliana At1g08880/F7G19_24 mRNA... 58 3e-006
gb|AY087924.1| Arabidopsis thaliana clone 39667 mRNA, compl... 58 3e-006
emb|BX818184.1|CNS0ACP1 Arabidopsis thaliana Full-length cD... 58 3e-006
emb|BX818384.1|CNS0ACP9 Arabidopsis thaliana Full-length cD... 58 3e-006
emb|CQ803632.1| Sequence 43 from Patent WO2004035798 58 3e-006
emb|CS061615.1| Sequence 6 from Patent WO2005028656 58 3e-006
ref|NM_100760.2| Arabidopsis thaliana DNA binding AT1G08880... 58 3e-006
gb|AV787756.1|AV787756 AV787756 RAFL6 Arabidopsis thaliana ... 56 1e-005
gb|BP573168.1|BP573168 BP573168 RAFL14 Arabidopsis thaliana... 56 1e-005
gb|BP816502.1|BP816502 BP816502 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP829371.1|BP829371 BP829371 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP834610.1|BP834610 BP834610 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP835215.1|BP835215 BP835215 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP847941.1|BP847941 BP847941 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP866302.1|BP866302 BP866302 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|AA394368.1|AA394368 25951 Lambda-PRL2 Arabidopsis thalia... 52 2e-004
gb|AI995882.1|AI995882 701549039 A. thaliana, Columbia Col-... 52 2e-004
gb|BE039411.1|BE039411 AC03C02 AC Arabidopsis thaliana cDNA... 52 2e-004
gb|AV782977.1|AV782977 AV782977 RAFL5 Arabidopsis thaliana ... 52 2e-004
gb|AV783757.1|AV783757 AV783757 RAFL5 Arabidopsis thaliana ... 52 2e-004
gb|AV822264.1|AV822264 AV822264 RAFL5 Arabidopsis thaliana ... 52 2e-004
gb|CB262369.1|CB262369 64-E8976-008-017-P15-pBl2 MPIZ-ADIS-... 52 2e-004
gb|CB264931.1|CB264931 27-E013840-035-001-E07-T7R MPIZ-ADIS... 52 2e-004
gb|AV531745.1|AV531745 AV531745 Arabidopsis thaliana flower... 52 2e-004
gb|AV534040.1|AV534040 AV534040 Arabidopsis thaliana flower... 52 2e-004
gb|AV549923.1|AV549923 AV549923 Arabidopsis thaliana roots ... 52 2e-004
gb|CK121613.1|CK121613 202g14.p1 AtM1 Arabidopsis thaliana ... 52 2e-004
gb|CK121628.1|CK121628 202h17.p1 AtM1 Arabidopsis thaliana ... 52 2e-004
gb|BP560904.1|BP560904 BP560904 RAFL5 Arabidopsis thaliana ... 52 2e-004
gb|BP607286.1|BP607286 BP607286 RAFL16 Arabidopsis thaliana... 52 2e-004
gb|CB252995.1|CB252995 12-E018360-019-007-G03-T7R MPIZ-ADIS... 52 2e-004
gb|CB253336.1|CB253336 04-E010931-019-003-G01-T7R MPIZ-ADIS... 52 2e-004
gb|BP810209.1|BP810209 BP810209 RAFL16 Arabidopsis thaliana... 52 2e-004
gb|BP826895.1|BP826895 BP826895 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP857134.1|BP857134 BP857134 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BP860733.1|BP860733 BP860733 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BP867260.1|BP867260 BP867260 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|AF385711.1|AF385711 Arabidopsis thaliana AT5g27670/F15A1... 52 2e-004
gb|AY078019.1| Arabidopsis thaliana AT5g27670/F15A18_130 mR... 52 2e-004
emb|AX507844.1| Sequence 2539 from Patent WO0216655 52 2e-004
gb|BT005779.1| Arabidopsis thaliana clone RAFL14-92-E07 (R2... 52 2e-004
gb|AY088714.1| Arabidopsis thaliana clone 927 mRNA, complet... 52 2e-004
gb|BT006076.1| Arabidopsis thaliana clone U20287 putative h... 52 2e-004
emb|CQ803702.1| Sequence 113 from Patent WO2004035798 52 2e-004
emb|CQ804506.1| Sequence 917 from Patent WO2004035798 52 2e-004
emb|CS061612.1| Sequence 3 from Patent WO2005028656 52 2e-004
emb|CS061617.1| Sequence 8 from Patent WO2005028656 52 2e-004
ref|NM_118857.2| Arabidopsis thaliana DNA binding AT4G27230... 52 2e-004
ref|NM_122649.2| Arabidopsis thaliana DNA binding AT5G27670... 52 2e-004
gb|AV566533.1|AV566533 AV566533 Arabidopsis thaliana green ... 50 7e-004
gb|CK117984.1|CK117984 208n13.p1 AtM1 Arabidopsis thaliana ... 50 7e-004
gb|CK120143.1|CK120143 208l11.p1 AtM1 Arabidopsis thaliana ... 50 7e-004
gb|AY085515.1| Arabidopsis thaliana clone 1553 mRNA, comple... 50 7e-004
emb|BX833753.1|CNS09Z4Y Arabidopsis thaliana Full-length cD... 50 7e-004
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 50 7e-004
emb|CS061622.1| Sequence 13 from Patent WO2005028656 50 7e-004
emb|CS061648.1| Sequence 39 from Patent WO2005028656 50 7e-004
emb|AL162971.1|ATT22P11 Arabidopsis thaliana DNA chromosome... 50 7e-004
ref|NM_120334.2| Arabidopsis thaliana DNA binding AT5G02560... 50 7e-004
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 50 7e-004
gb|AV787774.1|AV787774 AV787774 RAFL6 Arabidopsis thaliana ... 48 0.003
gb|BP588982.1|BP588982 BP588982 RAFL15 Arabidopsis thaliana... 48 0.003
gb|N65523.1|N65523 20563 Lambda-PRL2 Arabidopsis thaliana c... 46 0.010
gb|BP635085.1|BP635085 BP635085 RAFL17 Arabidopsis thaliana... 46 0.010
gb|BP811700.1|BP811700 BP811700 RAFL19 Arabidopsis thaliana... 46 0.010
dbj|AB014459.1| Arabidopsis thaliana mRNA for obtusifoliol ... 46 0.010
gb|AA728736.1|AA728736 33694 CD4-6 Arabidopsis thaliana cDN... 44 0.041
gb|AV783302.1|AV783302 AV783302 RAFL5 Arabidopsis thaliana ... 44 0.041
gb|AV822516.1|AV822516 AV822516 RAFL5 Arabidopsis thaliana ... 44 0.041
gb|CB260030.1|CB260030 05-E9624-013-004-J01-T7R MPIZ-ADIS-0... 44 0.041
gb|AV535723.1|AV535723 AV535723 Arabidopsis thaliana flower... 44 0.041
gb|AV544309.1|AV544309 AV544309 Arabidopsis thaliana roots ... 44 0.041
gb|AV545231.1|AV545231 AV545231 Arabidopsis thaliana roots ... 44 0.041
gb|AV552043.1|AV552043 AV552043 Arabidopsis thaliana roots ... 44 0.041
gb|AV553941.1|AV553941 AV553941 Arabidopsis thaliana roots ... 44 0.041
gb|CK118943.1|CK118943 215h05.p1 AtM1 Arabidopsis thaliana ... 44 0.041
gb|CK120540.1|CK120540 207e04.p1 AtM1 Arabidopsis thaliana ... 44 0.041
gb|CK121528.1|CK121528 202k22.p1 AtM1 Arabidopsis thaliana ... 44 0.041
gb|BP591274.1|BP591274 BP591274 RAFL15 Arabidopsis thaliana... 44 0.041
gb|CB253841.1|CB253841 86-E018438-019-009-K22-T7R MPIZ-ADIS... 44 0.041
gb|CB254190.1|CB254190 77-E015331-019-005-I20-T7R MPIZ-ADIS... 44 0.041
gb|CB254781.1|CB254781 60-E010740-019-001-G20-T7R MPIZ-ADIS... 44 0.041
gb|BP798753.1|BP798753 BP798753 RAFL14 Arabidopsis thaliana... 44 0.041
gb|BP812035.1|BP812035 BP812035 RAFL19 Arabidopsis thaliana... 44 0.041
gb|BP827049.1|BP827049 BP827049 RAFL19 Arabidopsis thaliana... 44 0.041
gb|BP827266.1|BP827266 BP827266 RAFL19 Arabidopsis thaliana... 44 0.041
gb|BP829032.1|BP829032 BP829032 RAFL19 Arabidopsis thaliana... 44 0.041
gb|BP868852.1|BP868852 BP868852 RAFL21 Arabidopsis thaliana... 44 0.041
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 44 0.041
gb|AF370188.1| Arabidopsis thaliana putative histone H2A pr... 44 0.041
gb|AY062945.1| Arabidopsis thaliana putative histone H2A pr... 44 0.041
gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis ... 44 0.041
emb|CS061620.1| Sequence 11 from Patent WO2005028656 44 0.041
emb|CS061641.1| Sequence 32 from Patent WO2005028656 44 0.041
ref|NM_103984.2| Arabidopsis thaliana DNA binding AT1G51060... 44 0.041
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 44 0.041
gb|CL470317.1|CL470317 SAIL_140_A11.v1 SAIL Collection Arab... 42 0.16
gb|BP583899.1|BP583899 BP583899 RAFL14 Arabidopsis thaliana... 42 0.16
gb|BP636102.1|BP636102 BP636102 RAFL18 Arabidopsis thaliana... 42 0.16
emb|BX833247.1|CNS09Z82 Arabidopsis thaliana Full-length cD... 42 0.16
>gb|AI996156.1|AI996156 701550262 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701550262, mRNA sequence
Length = 648
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Minus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 461 agcgtgtcggttccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 402
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 401 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 357
>gb|AV824800.1|AV824800 AV824800 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-76-N23 5',
mRNA sequence
Length = 486
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 244 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 303
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 304 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 348
>gb|CF652298.1|CF652298 46-L020577-066-004-K11-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001K114Q 5-PRIME, mRNA sequence
Length = 711
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 205 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 264
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 265 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 309
>gb|CD531101.1|CD531101 09H10 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 548
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 193 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 252
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 253 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 297
>gb|BP596405.1|BP596405 BP596405 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-34-I12 3',
mRNA sequence
Length = 451
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Minus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 444 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 385
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 384 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 340
>gb|BP812690.1|BP812690 BP812690 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-04-C13 5',
mRNA sequence
Length = 409
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 247 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 306
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 307 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 351
>gb|BP824600.1|BP824600 BP824600 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-10-B11 5',
mRNA sequence
Length = 383
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 246 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 305
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 306 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 350
>gb|AF412092.1|AF412092 Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds
Length = 687
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 248 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 307
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 308 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 352
>gb|AY093975.1| Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds
Length = 429
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 146 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 205
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 206 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 250
>gb|AY087924.1| Arabidopsis thaliana clone 39667 mRNA, complete sequence
Length = 728
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 255 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 314
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 315 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 359
>emb|BX818184.1|CNS0ACP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL65ZC10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 688
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 214 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 273
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 274 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 318
>emb|BX818384.1|CNS0ACP9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL76ZC11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 660
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 219 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 278
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 279 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 323
>emb|CQ803632.1| Sequence 43 from Patent WO2004035798
Length = 429
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 146 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 205
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 206 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 250
>emb|CS061615.1| Sequence 6 from Patent WO2005028656
Length = 739
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 278 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 337
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 338 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 382
>ref|NM_100760.2| Arabidopsis thaliana DNA binding AT1G08880 mRNA, complete cds
Length = 725
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 251 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 310
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaaga 333
|| | | ||| ||||||| |||||||| |||| ||||||||||
Sbjct: 311 aggtgttggagctggcgggaaacgcagcaagggataacaagaaga 355
>gb|AV787756.1|AV787756 AV787756 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-76-N23 3',
mRNA sequence
Length = 431
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 270 ctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaag 329
||||||||||||||||||||| | | ||| ||||||| |||||||| |||| ||||||
Sbjct: 399 ctcgagtacctcgccgccgaggtgttggagctggcgggaaacgcagcaagggataacaag 340
Query: 330 aaga 333
||||
Sbjct: 339 aaga 336
>gb|BP573168.1|BP573168 BP573168 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-83-D11 3',
mRNA sequence
Length = 437
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 270 ctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaag 329
||||||||||||||||||||| | | ||| ||||||| |||||||| |||| ||||||
Sbjct: 399 ctcgagtacctcgccgccgaggtgttggagctggcgggaaacgcagcaagggataacaag 340
Query: 330 aaga 333
||||
Sbjct: 339 aaga 336
>gb|BP816502.1|BP816502 BP816502 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-42-B17 5',
mRNA sequence
Length = 401
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 270 ctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaag 329
||||||||||||||||||||| | | ||| ||||||| |||||||| |||| ||||||
Sbjct: 259 ctcgagtacctcgccgccgaggtgttggagctggcgggaaacgcagcaagggataacaag 318
Query: 330 aaga 333
||||
Sbjct: 319 aaga 322
>gb|BP829371.1|BP829371 BP829371 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-81-N20 5',
mRNA sequence
Length = 368
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 270 ctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaag 329
||||||||||||||||||||| | | ||| ||||||| |||||||| |||| ||||||
Sbjct: 261 ctcgagtacctcgccgccgaggtgttggagctggcgggaaacgcagcaagggataacaag 320
Query: 330 aaga 333
||||
Sbjct: 321 aaga 324
>gb|BP834610.1|BP834610 BP834610 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-10-N08 5',
mRNA sequence
Length = 386
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 229 agcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccg 288
|||||||||| |||| || || ||||| ||| | || || |||||||||||||||||||
Sbjct: 283 agcgtgtcggtgccggagctccggtctatctctccgctgttctcgagtacctcgccgccg 342
Query: 289 agctcctcgagttggcggggaacgcagcgcgggacaacaagaag 332
|| | | ||| ||||||| |||||||| |||| |||||||||
Sbjct: 343 aggtgttggagctggcgggaaacgcagcaagggataacaagaag 386
>gb|BP835215.1|BP835215 BP835215 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-12-L07 5',
mRNA sequence
Length = 404
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 270 ctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaag 329
||||||||||||||||||||| | | ||| ||||||| |||||||| |||| ||||||
Sbjct: 287 ctcgagtacctcgccgccgaggtgttggagctggcgggaaacgcagcaagggataacaag 346
Query: 330 aaga 333
||||
Sbjct: 347 aaga 350
>gb|BP847941.1|BP847941 BP847941 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-K17 5',
mRNA sequence
Length = 407
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 270 ctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaag 329
||||||||||||||||||||| | | ||| ||||||| |||||||| |||| ||||||
Sbjct: 289 ctcgagtacctcgccgccgaggtgttggagctggcgggaaacgcagcaagggataacaag 348
Query: 330 aaga 333
||||
Sbjct: 349 aaga 352
>gb|BP866302.1|BP866302 BP866302 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-77-E13 5',
mRNA sequence
Length = 381
Score = 54.0 bits (27), Expect = 4e-005
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgag-ttggcggggaa 310
||||| ||||| ||||| || || ||||||||||| ||| | || ||| ||||| |||||
Sbjct: 241 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttggctgggaa 300
Query: 311 cgcagcgcgggacaacaagaaga 333
||||||| | |||||||||||||
Sbjct: 301 cgcagcgagagacaacaagaaga 323
>gb|AA394368.1|AA394368 25951 Lambda-PRL2 Arabidopsis thaliana cDNA clone 306D10T7, mRNA
sequence
Length = 611
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 257 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 316
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 317 gcgagagataataagaagaacaggat 342
>gb|AI995882.1|AI995882 701549039 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549039, mRNA sequence
Length = 526
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 403 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 344
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 343 gcagcgagagacaacaagaaga 322
>gb|BE039411.1|BE039411 AC03C02 AC Arabidopsis thaliana cDNA 5' similar to histone h2a,
mRNA sequence
Length = 694
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 159 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 218
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 219 gcgagagataataagaagaacaggat 244
>gb|AV782977.1|AV782977 AV782977 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-04-A18 3',
mRNA sequence
Length = 642
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 490 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 431
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 430 gcgagagataataagaagaacaggat 405
>gb|AV783757.1|AV783757 AV783757 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-12-N15 3',
mRNA sequence
Length = 689
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 484 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 425
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 424 gcgagagataataagaagaacaggat 399
>gb|AV822264.1|AV822264 AV822264 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-04-A18 5',
mRNA sequence
Length = 645
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 271 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 330
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 331 gcgagagataataagaagaacaggat 356
>gb|CB262369.1|CB262369 64-E8976-008-017-P15-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767P1517Q 5-PRIME, mRNA sequence
Length = 421
Score = 52.0 bits (26), Expect = 2e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 264 gccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggac 323
||||| ||||| ||||||||||||||| | | || ||||| || ||||||||| ||||
Sbjct: 109 gccgttctcgaatacctcgccgccgaggtattggaattggctggaaacgcagcgagggat 168
Query: 324 aacaagaaga 333
||||||||||
Sbjct: 169 aacaagaaga 178
>gb|CB264931.1|CB264931 27-E013840-035-001-E07-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000E071Q 5-PRIME, mRNA sequence
Length = 562
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 222 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 281
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 282 gcagcgagagacaacaagaaga 303
>gb|AV531745.1|AV531745 AV531745 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB029h02F 3', mRNA sequence
Length = 501
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 484 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 425
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 424 gcgagagataataagaagaacaggat 399
>gb|AV534040.1|AV534040 AV534040 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB072g10F 3', mRNA sequence
Length = 397
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 211 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 270
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 271 gcagcgagagacaacaagaaga 292
>gb|AV549923.1|AV549923 AV549923 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ105g12R 5', mRNA sequence
Length = 497
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 136 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 195
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 196 gcagcgagagacaacaagaaga 217
>gb|CK121613.1|CK121613 202g14.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011G14202
5-PRIME, mRNA sequence
Length = 682
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 174 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 233
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 234 gcgagagataataagaagaacaggat 259
>gb|CK121628.1|CK121628 202h17.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H17202
5-PRIME, mRNA sequence
Length = 797
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 260 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 319
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 320 gcgagagataataagaagaacaggat 345
>gb|BP560904.1|BP560904 BP560904 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-12-N15 5',
mRNA sequence
Length = 660
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 238 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 297
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 298 gcgagagataataagaagaacaggat 323
>gb|BP607286.1|BP607286 BP607286 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-74-E09 3',
mRNA sequence
Length = 421
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 420 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 361
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 360 gcagcgagagacaacaagaaga 339
>gb|CB252995.1|CB252995 12-E018360-019-007-G03-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768G037Q 5-PRIME, mRNA sequence
Length = 566
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 220 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 279
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 280 gcagcgagagacaacaagaaga 301
>gb|CB253336.1|CB253336 04-E010931-019-003-G01-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768G013Q 5-PRIME, mRNA sequence
Length = 464
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 230 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 289
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 290 gcagcgagagacaacaagaaga 311
>gb|BP810209.1|BP810209 BP810209 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-25-B13 5',
mRNA sequence
Length = 424
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 240 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 299
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 300 gcagcgagagacaacaagaaga 321
>gb|BP826895.1|BP826895 BP826895 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-73-L14 5',
mRNA sequence
Length = 359
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 240 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 299
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 300 gcagcgagagacaacaagaaga 321
>gb|BP857134.1|BP857134 BP857134 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-32-H11 5',
mRNA sequence
Length = 352
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 241 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 300
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 301 gcagcgagagacaacaagaaga 322
>gb|BP860733.1|BP860733 BP860733 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-45-B17 5',
mRNA sequence
Length = 380
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 240 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 299
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 300 gcagcgagagacaacaagaaga 321
>gb|BP867260.1|BP867260 BP867260 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-80-H08 5',
mRNA sequence
Length = 366
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 240 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 299
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 300 gcagcgagagacaacaagaaga 321
>gb|AF385711.1|AF385711 Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds
Length = 759
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 270 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 329
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 330 gcgagagataataagaagaacaggat 355
>gb|AY078019.1| Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds
Length = 453
Score = 52.0 bits (26), Expect = 2e-004
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| ||||| ||||| ||||| ||||||||| | || ||| | || |||||||||
Sbjct: 181 tacctcgccgccgttctcgaatacctagccgccgaggtacttgagctagctgggaacgca 240
Query: 315 gcgcgggacaacaagaagaaccggat 340
||| | || || ||||||||| ||||
Sbjct: 241 gcgagagataataagaagaacaggat 266
>emb|AX507844.1| Sequence 2539 from Patent WO0216655
Length = 396
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 151 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 210
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 211 gcagcgagagacaacaagaaga 232
>gb|BT005779.1| Arabidopsis thaliana clone RAFL14-92-E07 (R20287) putative histone
H2A (At4g27230) mRNA, complete cds
Length = 677
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 241 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 300
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 301 gcagcgagagacaacaagaaga 322
>gb|AY088714.1| Arabidopsis thaliana clone 927 mRNA, complete sequence
Length = 660
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||| ||||| ||||| || || ||||||||||| ||| | || ||| | || ||||||
Sbjct: 246 gtctatctcgccgccgttcttgaatacctcgccgctgaggtacttgagcttgctgggaac 305
Query: 312 gcagcgcgggacaacaagaaga 333
|||||| | |||||||||||||
Sbjct: 306 gcagcgagagacaacaagaaga 327
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 369,909
Number of Sequences: 1013581
Number of extensions: 369909
Number of successful extensions: 27834
Number of sequences better than 0.5: 108
Number of HSP's better than 0.5 without gapping: 106
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 27092
Number of HSP's gapped (non-prelim): 727
length of query: 887
length of database: 908,940,872
effective HSP length: 20
effective length of query: 867
effective length of database: 888,669,252
effective search space: 770476241484
effective search space used: 770476241484
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)