BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521865.2.1
(638 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV538851.1|AV538851 AV538851 Arabidopsis thaliana roots ... 149 7e-034
gb|AF428297.1|AF428297 Arabidopsis thaliana At2g39770/T5I7.... 145 1e-032
gb|AV794725.1|AV794725 AV794725 RAFL8 Arabidopsis thaliana ... 137 3e-030
gb|AV541661.1|AV541661 AV541661 Arabidopsis thaliana roots ... 137 3e-030
gb|AV563216.1|AV563216 AV563216 Arabidopsis thaliana green ... 137 3e-030
gb|CK120588.1|CK120588 207b24.p1 AtM1 Arabidopsis thaliana ... 137 3e-030
gb|CB252667.1|CB252667 20-E010931-019-003-G05-T7R MPIZ-ADIS... 137 3e-030
gb|CB253750.1|CB253750 89-E015391-019-006-A23-T7R MPIZ-ADIS... 137 3e-030
gb|AF076484.1|AF076484 Arabidopsis thaliana GDP-mannose pyr... 137 3e-030
gb|AF108660.1|AF108660 Arabidopsis thaliana CYT1 protein (c... 137 3e-030
emb|AJ275979.1|ATH275979 Arabidopsis thaliana gene for GDP-... 137 3e-030
gb|AY057541.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, ... 137 3e-030
gb|AF361812.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, ... 137 3e-030
gb|AY133643.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, ... 137 3e-030
gb|BT000697.1| Arabidopsis thaliana clone RAFL08-14-D02 (R1... 137 3e-030
gb|AY087698.1| Arabidopsis thaliana clone 37775 mRNA, compl... 137 3e-030
gb|BT006365.1| Arabidopsis thaliana At2g39770/T5I7.7 gene, ... 137 3e-030
dbj|BD248368.1| Gene participating in tolerance against env... 137 3e-030
gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7... 137 3e-030
emb|CQ805052.1| Sequence 1463 from Patent WO2004035798 137 3e-030
ref|NM_129535.2| Arabidopsis thaliana CYT1 (CYTOKINESIS DEF... 137 3e-030
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 137 3e-030
gb|AV519100.1|AV519100 AV519100 Arabidopsis thaliana aboveg... 129 6e-028
gb|BP573196.1|BP573196 BP573196 RAFL14 Arabidopsis thaliana... 129 6e-028
gb|BP581993.1|BP581993 BP581993 RAFL14 Arabidopsis thaliana... 129 6e-028
gb|BP587164.1|BP587164 BP587164 RAFL15 Arabidopsis thaliana... 129 6e-028
gb|BP588612.1|BP588612 BP588612 RAFL15 Arabidopsis thaliana... 129 6e-028
emb|BX819717.1|CNS0A8ID Arabidopsis thaliana Full-length cD... 129 6e-028
gb|AV565595.1|AV565595 AV565595 Arabidopsis thaliana green ... 127 3e-027
gb|BP591105.1|BP591105 BP591105 RAFL15 Arabidopsis thaliana... 127 3e-027
gb|BP572649.1|BP572649 BP572649 RAFL14 Arabidopsis thaliana... 125 1e-026
gb|AV439931.1|AV439931 AV439931 Arabidopsis thaliana above-... 123 4e-026
gb|AV802567.1|AV802567 AV802567 RAFL9 Arabidopsis thaliana ... 121 2e-025
gb|BP585910.1|BP585910 BP585910 RAFL15 Arabidopsis thaliana... 121 2e-025
gb|BP618668.1|BP618668 BP618668 RAFL16 Arabidopsis thaliana... 121 2e-025
gb|AV817192.1|AV817192 AV817192 RAFL9 Arabidopsis thaliana ... 117 2e-024
gb|AV805852.1|AV805852 AV805852 RAFL9 Arabidopsis thaliana ... 113 4e-023
gb|AV795522.1|AV795522 AV795522 RAFL8 Arabidopsis thaliana ... 111 1e-022
gb|BP573056.1|BP573056 BP573056 RAFL14 Arabidopsis thaliana... 109 6e-022
gb|BP639202.1|BP639202 BP639202 RAFL19 Arabidopsis thaliana... 109 6e-022
gb|AV566301.1|AV566301 AV566301 Arabidopsis thaliana green ... 107 2e-021
gb|BP580817.1|BP580817 BP580817 RAFL14 Arabidopsis thaliana... 107 2e-021
gb|BP781345.1|BP781345 BP781345 RAFL7 Arabidopsis thaliana ... 107 2e-021
gb|AV530852.1|AV530852 AV530852 Arabidopsis thaliana flower... 100 6e-019
gb|BP581460.1|BP581460 BP581460 RAFL14 Arabidopsis thaliana... 100 6e-019
gb|BP564831.1|BP564831 BP564831 RAFL14 Arabidopsis thaliana... 92 1e-016
gb|BP783001.1|BP783001 BP783001 RAFL7 Arabidopsis thaliana ... 92 1e-016
gb|BP788478.1|BP788478 BP788478 RAFL7 Arabidopsis thaliana ... 92 1e-016
gb|BP655371.1|BP655371 BP655371 RAFL19 Arabidopsis thaliana... 90 5e-016
gb|BP657338.1|BP657338 BP657338 RAFL19 Arabidopsis thaliana... 88 2e-015
gb|BP624153.1|BP624153 BP624153 RAFL17 Arabidopsis thaliana... 82 1e-013
gb|BP569139.1|BP569139 BP569139 RAFL14 Arabidopsis thaliana... 80 5e-013
gb|BP572177.1|BP572177 BP572177 RAFL14 Arabidopsis thaliana... 80 5e-013
gb|BP621994.1|BP621994 BP621994 RAFL17 Arabidopsis thaliana... 78 2e-012
gb|BP626637.1|BP626637 BP626637 RAFL17 Arabidopsis thaliana... 78 2e-012
gb|BP574418.1|BP574418 BP574418 RAFL14 Arabidopsis thaliana... 74 3e-011
gb|AV811720.1|AV811720 AV811720 RAFL9 Arabidopsis thaliana ... 72 1e-010
gb|BP637445.1|BP637445 BP637445 RAFL19 Arabidopsis thaliana... 72 1e-010
gb|BP779750.1|BP779750 BP779750 RAFL7 Arabidopsis thaliana ... 64 3e-008
gb|BP568511.1|BP568511 BP568511 RAFL14 Arabidopsis thaliana... 62 1e-007
gb|BP663248.1|BP663248 BP663248 RAFL21 Arabidopsis thaliana... 60 5e-007
gb|BP633012.1|BP633012 BP633012 RAFL17 Arabidopsis thaliana... 50 5e-004
gb|BP642986.1|BP642986 BP642986 RAFL19 Arabidopsis thaliana... 50 5e-004
gb|BP608458.1|BP608458 BP608458 RAFL16 Arabidopsis thaliana... 44 0.029
gb|BP562959.1|BP562959 BP562959 RAFL16 Arabidopsis thaliana... 40 0.45
gb|BP597244.1|BP597244 BP597244 RAFL15 Arabidopsis thaliana... 40 0.45
>gb|AV538851.1|AV538851 AV538851 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ122c12F 3', mRNA sequence
Length = 535
Score = 149 bits (75), Expect = 7e-034
Identities = 183/219 (83%)
Strand = Plus / Minus
Query: 137 tgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagcattatc 196
||||| |||||||| || || || |||||||||||||| || ||||| | ||| || |||
Sbjct: 465 tgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagtatcatc 406
Query: 197 ggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctgggggag 256
|| ||||||||||| |||||||||||||| |||| ||||| ||||| ||||| || |||
Sbjct: 405 gggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctcggtgag 346
Query: 257 gatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaagag 316
|||||||||||| | |||||| |||| |||||||| || |||||| | ||||| || |||
Sbjct: 345 gatgttcatgtgagcgatgagatgtatagcaatggaggagttgttttgccacacaaggag 286
Query: 317 atcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||||||||||||| ||||| | ||||| || ||||||
Sbjct: 285 atcaagtcaagcatcttgaaggcagagatagtgatgtga 247
>gb|AF428297.1|AF428297 Arabidopsis thaliana At2g39770/T5I7.7 mRNA, complete cds
Length = 1440
Score = 145 bits (73), Expect = 1e-032
Identities = 187/225 (83%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 1020 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 1079
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| |||||||||||
Sbjct: 1080 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgactatcctc 1139
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1140 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1199
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1200 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1244
>gb|AV794725.1|AV794725 AV794725 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-14-D02 3',
mRNA sequence
Length = 445
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 410 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 351
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 350 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 291
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 290 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 231
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 230 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 186
>gb|AV541661.1|AV541661 AV541661 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ169g10F 3', mRNA sequence
Length = 588
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 410 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 351
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 350 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 291
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 290 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 231
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 230 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 186
>gb|AV563216.1|AV563216 AV563216 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ183c10F 3', mRNA sequence
Length = 551
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 414 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 355
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 354 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 295
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 294 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 235
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 234 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 190
>gb|CK120588.1|CK120588 207b24.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B24207
5-PRIME, mRNA sequence
Length = 635
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 201 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 260
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 261 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 320
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 321 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 380
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 381 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 425
>gb|CB252667.1|CB252667 20-E010931-019-003-G05-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768G053Q 5-PRIME, mRNA sequence
Length = 520
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 264 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 323
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 324 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 383
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 384 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 443
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 444 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 488
>gb|CB253750.1|CB253750 89-E015391-019-006-A23-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A236Q 5-PRIME, mRNA sequence
Length = 450
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 51 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 110
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 111 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 170
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 171 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 230
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 231 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 275
>gb|AF076484.1|AF076484 Arabidopsis thaliana GDP-mannose pyrophosphorylase (GMP1) mRNA,
complete cds
Length = 1490
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 1014 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 1073
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 1074 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1133
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1134 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1193
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1194 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1238
>gb|AF108660.1|AF108660 Arabidopsis thaliana CYT1 protein (cyt1) mRNA, complete cds
Length = 1477
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 1012 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 1071
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 1072 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1131
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1132 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1191
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1192 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1236
>emb|AJ275979.1|ATH275979 Arabidopsis thaliana gene for GDP-mannose pyrophosphorylase, gene for
vacuolar ribonuclease and gene for proline byosinthesis
codifying enzyme
Length = 9423
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 2546 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 2605
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 2606 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 2665
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 2666 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 2725
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 2726 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 2770
>gb|AY057541.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, complete cds
Length = 1482
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 1020 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 1079
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 1080 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1139
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1140 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1199
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1200 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1244
>gb|AF361812.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, complete cds
Length = 1450
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 1020 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 1079
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 1080 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1139
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1140 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1199
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1200 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1244
>gb|AY133643.1| Arabidopsis thaliana At2g39770/T5I7.7 mRNA, complete cds
Length = 1086
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 862 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 921
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 922 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 981
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 982 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1041
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1042 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1086
>gb|BT000697.1| Arabidopsis thaliana clone RAFL08-14-D02 (R11125) putative
GDP-mannose pyrophosphorylase (At2g39770) mRNA, complete
cds
Length = 1444
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 1020 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 1079
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 1080 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1139
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1140 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1199
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1200 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1244
>gb|AY087698.1| Arabidopsis thaliana clone 37775 mRNA, complete sequence
Length = 1480
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 1016 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 1075
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 1076 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1135
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1136 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1195
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1196 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1240
>gb|BT006365.1| Arabidopsis thaliana At2g39770/T5I7.7 gene, complete cds
Length = 1086
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 862 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 921
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 922 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 981
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 982 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1041
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1042 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1086
>dbj|BD248368.1| Gene participating in tolerance against environmental stress
Length = 1109
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 883 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 942
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 943 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1002
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1003 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1062
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1063 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1107
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
sequence
Length = 92624
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 33050 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 33109
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 33110 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 33169
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 33170 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 33229
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 33230 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 33274
>emb|CQ805052.1| Sequence 1463 from Patent WO2004035798
Length = 1086
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 862 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 921
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 922 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 981
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 982 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1041
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1042 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1086
>ref|NM_129535.2| Arabidopsis thaliana CYT1 (CYTOKINESIS DEFECTIVE 1);
nucleotidyltransferase AT2G39770 (CYT1) mRNA, complete
cds
Length = 1488
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 1020 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 1079
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 1080 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1139
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1140 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1199
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1200 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1244
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 137 bits (69), Expect = 3e-030
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 16597595 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 16597654
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 16597655 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 16597714
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 16597715 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 16597774
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 16597775 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 16597819
>gb|AV519100.1|AV519100 AV519100 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD48c11F 3', mRNA
sequence
Length = 461
Score = 129 bits (65), Expect = 6e-028
Identities = 185/225 (82%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 323 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 264
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 263 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 204
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | ||||
Sbjct: 203 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccaccc 144
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 143 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 99
>gb|BP573196.1|BP573196 BP573196 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-83-F06 3',
mRNA sequence
Length = 436
Score = 129 bits (65), Expect = 6e-028
Identities = 185/225 (82%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 409 tcccggtgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 350
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 349 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 290
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || ||| || | |||||
Sbjct: 289 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagtttttttgccacac 230
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 229 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 185
>gb|BP581993.1|BP581993 BP581993 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-34-F08 3',
mRNA sequence
Length = 468
Score = 129 bits (65), Expect = 6e-028
Identities = 185/225 (82%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 314 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 255
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 254 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 195
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || | |||||| || |||||| | |||||
Sbjct: 194 ggtgaggatgttcatgtgagcgatgagatctataccaatggaggagttgttttgccacac 135
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 134 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 90
>gb|BP587164.1|BP587164 BP587164 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-41-G23 3',
mRNA sequence
Length = 434
Score = 129 bits (65), Expect = 6e-028
Identities = 185/225 (82%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 421 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 362
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 361 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 302
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 301 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 242
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||| | |||| ||| ||||||| ||||| || ||||||
Sbjct: 241 aaggagatccaatcaaacatcttgaagccagagatagtgatgtga 197
>gb|BP588612.1|BP588612 BP588612 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-46-O04 3',
mRNA sequence
Length = 407
Score = 129 bits (65), Expect = 6e-028
Identities = 176/213 (82%)
Strand = Plus / Minus
Query: 143 gtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctgg 202
|||||||| || || || |||||||||||||| || ||||| | ||| || ||||| |||
Sbjct: 407 gtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagtatcatcgggtgg 348
Query: 203 cactcaactgttggtcaatgggcacggatagagaatatgactatcctgggggaggatgtt 262
|||||||| |||||||||||||| |||| ||||| ||||| ||||| || |||||||||
Sbjct: 347 cactcaacggttggtcaatgggccaggatcgagaacatgacgatcctcggtgaggatgtt 288
Query: 263 catgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaagagatcaag 322
|||||| | |||||| | || |||||||| || |||||| | ||||| || ||||||||
Sbjct: 287 catgtgagcgatgagatctatagcaatggaggagttgttttgccacacaaggagatcaaa 228
Query: 323 tcaagcattctgaagcctgagatcgtcatgtga 355
|||| ||| ||||||| ||||| || ||||||
Sbjct: 227 tcaaacatcttgaagccagagatagtgatgtga 195
>emb|BX819717.1|CNS0A8ID Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS1ZC08 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1343
Score = 129 bits (65), Expect = 6e-028
Identities = 185/225 (82%)
Strand = Plus / Plus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| | ||||| | |||
Sbjct: 959 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtttatctcgagcagt 1018
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 1019 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 1078
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 1079 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 1138
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 1139 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 1183
>gb|AV565595.1|AV565595 AV565595 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227c01F 3', mRNA sequence
Length = 428
Score = 127 bits (64), Expect = 3e-027
Identities = 175/212 (82%)
Strand = Plus / Minus
Query: 144 tcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggc 203
||||||| || || || |||||||||||||| || ||||| | ||| || ||||| ||||
Sbjct: 428 tcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagtatcatcgggtggc 369
Query: 204 actcaactgttggtcaatgggcacggatagagaatatgactatcctgggggaggatgttc 263
||||||| |||||||||||||| |||| ||||| ||||| ||||| || ||||||||||
Sbjct: 368 actcaacggttggtcaatgggccaggatcgagaacatgacgatcctcggtgaggatgttc 309
Query: 264 atgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaagagatcaagt 323
||||| | |||||| | || |||||||| || |||||| | ||||| || |||||||| |
Sbjct: 308 atgtgagcgatgagatctatagcaatggaggagttgttttgccacacaaggagatcaaat 249
Query: 324 caagcattctgaagcctgagatcgtcatgtga 355
||| ||| ||||||| ||||| || ||||||
Sbjct: 248 caaacatcttgaagccagagatagtgatgtga 217
>gb|BP591105.1|BP591105 BP591105 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-13-G22 3',
mRNA sequence
Length = 429
Score = 127 bits (64), Expect = 3e-027
Identities = 175/212 (82%)
Strand = Plus / Minus
Query: 144 tcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggc 203
||||||| || || || |||||||||||||| || ||||| | ||| || ||||| ||||
Sbjct: 423 tcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagtatcatcgggtggc 364
Query: 204 actcaactgttggtcaatgggcacggatagagaatatgactatcctgggggaggatgttc 263
||||||| |||||||||||||| |||| ||||| ||||| ||||| || ||||||||||
Sbjct: 363 actcaacggttggtcaatgggccaggatcgagaacatgacgatcctcggtgaggatgttc 304
Query: 264 atgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaagagatcaagt 323
||||| | |||||| | || |||||||| || |||||| | ||||| || |||||||| |
Sbjct: 303 atgtgagcgatgagatctatagcaatggaggagttgttttgccacacaaggagatcaaat 244
Query: 324 caagcattctgaagcctgagatcgtcatgtga 355
||| ||| ||||||| ||||| || ||||||
Sbjct: 243 caaacatcttgaagccagagatagtgatgtga 212
>gb|BP572649.1|BP572649 BP572649 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-80-N14 3',
mRNA sequence
Length = 432
Score = 125 bits (63), Expect = 1e-026
Identities = 162/195 (83%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||| || ||||| | ||| || ||||| ||||||||||| |||||||||
Sbjct: 285 atcaagaagcatgcgtgtatctcgagcagtatcatcgggtggcactcaacggttggtcaa 226
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| |||| ||||| ||||| ||||| || ||||||||||||||| | |||||| |
Sbjct: 225 tgggccaggatcgagaacatgacgatcctcggtgaggatgttcatgtgagcgatgagatc 166
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
|| |||||||| || |||||| | ||||| || |||||||| |||| ||| |||||||
Sbjct: 165 tatagcaatggaggagttgttttgccacacaaggagatcaaatcaaacatcttgaagcca 106
Query: 341 gagatcgtcatgtga 355
||||| || ||||||
Sbjct: 105 gagatagtgatgtga 91
>gb|AV439931.1|AV439931 AV439931 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD29c07_f 3', mRNA
sequence
Length = 383
Score = 123 bits (62), Expect = 4e-026
Identities = 186/226 (82%), Gaps = 1/226 (0%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 366 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgatcagt 307
Query: 191 attatcggc-tggcactcaactgttggtcaatgggcacggatagagaatatgactatcct 249
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 306 atcatcggagtggcactcaacggttggtcaatgggccaggatggagaacatgacgatcct 247
Query: 250 gggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccaca 309
|| ||||||||||||||| | |||||| |||| |||||||| | |||||| | |||||
Sbjct: 246 cggtgaggatgttcatgtgagcgatgagatgtatagcaatggagtagttgttttgccaca 187
Query: 310 taaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 186 caaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 141
>gb|AV802567.1|AV802567 AV802567 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-32-G08 3',
mRNA sequence
Length = 399
Score = 121 bits (61), Expect = 2e-025
Identities = 185/225 (82%), Gaps = 1/225 (0%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 371 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 312
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 311 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 252
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| || |||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 251 ggtga-gatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 193
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 192 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 148
>gb|BP585910.1|BP585910 BP585910 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-04-F14 3',
mRNA sequence
Length = 456
Score = 121 bits (61), Expect = 2e-025
Identities = 184/225 (81%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| ||||||| || || || |||||||||||||| || ||||| | ||
Sbjct: 409 tcccgatgcacgttcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcatt 350
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 349 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 290
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 289 ggtgaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 230
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 229 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 185
>gb|BP618668.1|BP618668 BP618668 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-29-D16 3',
mRNA sequence
Length = 447
Score = 121 bits (61), Expect = 2e-025
Identities = 184/225 (81%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 405 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 346
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||| ||| |||| ||||| ||||| |||||
Sbjct: 345 atcatcgggtggcactcaacggttggtcaattggccaggatcgagaacatgacgatcctc 286
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||| ||||||||||| | |||||| | || |||||||| || |||||| | |||||
Sbjct: 285 ggtgagaatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacac 226
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 225 aaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 181
>gb|AV817192.1|AV817192 AV817192 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-93-I03 3',
mRNA sequence
Length = 401
Score = 117 bits (59), Expect = 2e-024
Identities = 161/195 (82%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||| || ||||| | ||| || ||||| ||||||||||| |||||||||
Sbjct: 398 atcaagaagcatgcgtgtatctcgagcagtatcatcgggtggcactcaacggttggtcaa 339
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| |||| ||||| ||||| ||||| || ||||||||||||||| | |||||| |
Sbjct: 338 tgggccaggatcgagaacatgacgatcctcggtgaggatgttcatgtgagcgatgagatc 279
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
|| |||||||| || |||||| | ||||| || |||||||| || | ||| |||||||
Sbjct: 278 tatagcaatggaggagttgttttgccacacaaggagatcaaatccaacatcttgaagcca 219
Query: 341 gagatcgtcatgtga 355
||||| || ||||||
Sbjct: 218 gagatagtgatgtga 204
>gb|AV805852.1|AV805852 AV805852 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-44-H04 3',
mRNA sequence
Length = 399
Score = 113 bits (57), Expect = 4e-023
Identities = 184/225 (81%), Gaps = 1/225 (0%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 314 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 255
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 254 atcatcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 195
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || ||| |||| || ||| || | |||||
Sbjct: 194 ggtgaggatgttcatgtgagcgatgagatctatagccatggaggagtttttttgccacac 135
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 134 aaggagatcaaatcaa-catcttgaagccagagatagtaatgtga 91
>gb|AV795522.1|AV795522 AV795522 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-17-P21 3',
mRNA sequence
Length = 442
Score = 111 bits (56), Expect = 1e-022
Identities = 162/196 (82%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||| | ||||| | ||| || ||||| ||||||||||| |||||||||
Sbjct: 402 atcaagaagcatgcgtttatctcgagcagtatcatcgggtggcactcaacggttggtcaa 343
Query: 221 tgggc-acggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggt 279
||||| | |||| ||||| ||||| ||||| || ||||||||||||||| | |||||| |
Sbjct: 342 tgggccagggatcgagaacatgacgatcctcggtgaggatgttcatgtgagcgatgagat 283
Query: 280 gtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcc 339
|| |||||||| || |||||| | ||||| || |||||||| |||| ||| |||||||
Sbjct: 282 ctatagcaatggaggagttgttttgccacacaaggagatcaaatcaaacatcttgaagcc 223
Query: 340 tgagatcgtcatgtga 355
||||| || ||||||
Sbjct: 222 agagatagtgatgtga 207
>gb|BP573056.1|BP573056 BP573056 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-82-L13 3',
mRNA sequence
Length = 459
Score = 109 bits (55), Expect = 6e-022
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 409 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 350
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| |||||||| || |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 349 atcatcgggtggcactccacggttggtcaatgggccaggatcgagaacatgacgatcctc 290
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| ||||||||||||||| | |||||| | || | |||||| || ||| || | |||||
Sbjct: 289 ggtgaggatgttcatgtgagcgatgagatctataacaatggaggagtttttttgccacac 230
Query: 311 aaagagatcaagtcaagcattctgaagcctgagat 345
|| |||||||| |||| ||| ||||||| |||||
Sbjct: 229 aaggagatcaaatcaaacatcttgaagccagagat 195
>gb|BP639202.1|BP639202 BP639202 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-46-O10 3',
mRNA sequence
Length = 413
Score = 109 bits (55), Expect = 6e-022
Identities = 160/195 (82%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||| ||||| || ||||| | ||| || ||||| ||||||||||| |||||||||
Sbjct: 298 atcaagaaccatgcgtgtatctcgaccagtatcatcgggtggcactcaacggttggtcaa 239
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| |||| ||||| ||||| ||||| || ||||||||||||||| | |||||| |
Sbjct: 238 tgggccaggatcgagaacatgacgatcctcggtgaggatgttcatgtgagcgatgagatc 179
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
|| ||| |||| || |||||| | ||||| || |||||||| |||| ||| |||||||
Sbjct: 178 tatagccatggaggagttgttttgccacacaaggagatcaaatcaaacatcttgaagcca 119
Query: 341 gagatcgtcatgtga 355
||||| || ||||||
Sbjct: 118 gagatagtgatgtga 104
>gb|AV566301.1|AV566301 AV566301 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ240h07F 3', mRNA sequence
Length = 390
Score = 107 bits (54), Expect = 2e-021
Identities = 135/162 (83%)
Strand = Plus / Minus
Query: 194 atcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctgggg 253
||||| ||||||||||| |||||||||||||| |||| ||||| ||||| ||||| ||
Sbjct: 367 atcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctcggt 308
Query: 254 gaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaa 313
||||||||||||||| | |||||| | || |||||||| || |||||| | ||||| ||
Sbjct: 307 gaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacacaag 248
Query: 314 gagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 247 gagatcaaatcaaacatcttgaagccagagatagtgatgtga 206
>gb|BP580817.1|BP580817 BP580817 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-29-D19 3',
mRNA sequence
Length = 417
Score = 107 bits (54), Expect = 2e-021
Identities = 185/226 (81%), Gaps = 2/226 (0%)
Strand = Plus / Minus
Query: 131 tcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaacagc 190
||||| ||||| |||||||| || || || |||||||||||||| || ||||| | |||
Sbjct: 414 tcccgatgcacggtcatgcgtggagtccgcatcaagaagcatgcgtgtatctcgagcagt 355
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
|| ||||| || |||||||| |||||||||||||| |||| ||||| ||||| |||||
Sbjct: 354 atcatcgggtg-cactcaacggttggtcaatgggccaggatcgagaacatgacgatcctc 296
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtaca-gcaatggcggtgttgttctcccaca 309
|| ||||||||||||||| | |||||| | || | ||||||| || |||||| | |||||
Sbjct: 295 ggtgaggatgttcatgtgagcgatgagatctataggcaatggaggagttgttttgccaca 236
Query: 310 taaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| |||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 235 caaggagatcaaatcaaacatcttgaagccagagatagtgatgtga 190
>gb|BP781345.1|BP781345 BP781345 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-77-M17 3',
mRNA sequence
Length = 381
Score = 107 bits (54), Expect = 2e-021
Identities = 135/162 (83%)
Strand = Plus / Minus
Query: 194 atcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctgggg 253
||||| ||||||||||| |||||||||||||| |||| ||||| ||||| ||||| ||
Sbjct: 367 atcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctcggt 308
Query: 254 gaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaa 313
||||||||||||||| | |||||| | || |||||||| || |||||| | ||||| ||
Sbjct: 307 gaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacacaag 248
Query: 314 gagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 247 gagatcaaatcaaacatcttgaagccagagatagtgatgtga 206
>gb|AV530852.1|AV530852 AV530852 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB010d10F 3', mRNA sequence
Length = 337
Score = 99.6 bits (50), Expect = 6e-019
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 194 atcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctgggg 253
||||| ||||||||||| |||||||||||||| |||| ||||| ||||| ||||| ||
Sbjct: 336 atcgggtggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctcggt 277
Query: 254 gaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaa 313
||||||||||||||| | |||||| | || |||||||| || |||||| | ||||| ||
Sbjct: 276 gaggatgttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacacaag 217
Query: 314 gagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||||||| || | ||| ||||||| ||||| || ||||||
Sbjct: 216 gagatcaaatctaacatcttgaagccagagatagtgatgtga 175
>gb|BP581460.1|BP581460 BP581460 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-32-A14 3',
mRNA sequence
Length = 468
Score = 99.6 bits (50), Expect = 6e-019
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 194 atcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctgggg 253
||||| ||||||||||| |||||||||||||| |||| ||||| ||||| ||||| ||
Sbjct: 350 atcgggtggcactcaaccgttggtcaatgggccaggatcgagaacatgacgatcctcggt 291
Query: 254 gaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaa 313
||||||||||||||| | |||||| | || |||||||| || ||| || | ||||| ||
Sbjct: 290 gaggatgttcatgtgagcgatgagatctatagcaatggaggagtttttttgccacacaag 231
Query: 314 gagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 230 gagatcaaatcaaacatcttgaagccagagatagtgatgtga 189
>gb|BP564831.1|BP564831 BP564831 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-09-J11 3',
mRNA sequence
Length = 446
Score = 91.7 bits (46), Expect = 1e-016
Identities = 137/166 (82%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
||||| |||||||| || ||||| | ||| || ||||| ||||||||||| |||||||||
Sbjct: 433 atcaaaaagcatgcctgtatctcgaccagtatcatcgg-tggcactcaacggttggtcaa 375
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||| | |||| ||||| ||||| ||||| || ||||||||||||||| | |||||| |
Sbjct: 374 tggcccaggatcgagaacatgacgatcctcggtgaggatgttcatgtgagcgatgagatc 315
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaa 326
|| |||||||| || |||||| | ||||| || |||||||| ||||
Sbjct: 314 tatagcaatggaggagttgttttgccacacaaggagatcaaatcaa 269
>gb|BP783001.1|BP783001 BP783001 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-84-F22 3',
mRNA sequence
Length = 387
Score = 91.7 bits (46), Expect = 1e-016
Identities = 103/122 (84%)
Strand = Plus / Minus
Query: 200 tggcactcaactgttggtcaatgggcacggatagagaatatgactatcctgggggaggat 259
||||||||||| |||||||||||||| |||| ||||| ||||| ||||| || ||||||
Sbjct: 365 tggcactcaacggttggtcaatgggccaggatcgagaacatgacgatcctcggtgaggat 306
Query: 260 gttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaagagatc 319
||||||||| | |||||| | || |||||||| || |||||| | ||||| || ||||||
Sbjct: 305 gttcatgtgagcgatgagatctatagcaatggaggagttgttttgccacacaaggagatc 246
Query: 320 aa 321
||
Sbjct: 245 aa 244
>gb|BP788478.1|BP788478 BP788478 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-34-A01 3',
mRNA sequence
Length = 401
Score = 91.7 bits (46), Expect = 1e-016
Identities = 134/162 (82%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 194 atcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctgggg 253
||||| ||||||||||| |||||||||||| || |||| ||||| ||||| ||||| ||
Sbjct: 381 atcgggtggcactcaacggttggtcaatggcca-ggatcgagaacatgacgatcctcggt 323
Query: 254 gaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaa 313
||||||||||||||| | ||| || | || |||||||| || |||||| | ||||| ||
Sbjct: 322 gaggatgttcatgtgagcgattagatctatagcaatggaggagttgttttgccacacaag 263
Query: 314 gagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|||||||| |||| ||| ||||||| ||||| || ||||||
Sbjct: 262 gagatcaaatcaaacatcttgaagccagagatagtgatgtga 221
>gb|BP655371.1|BP655371 BP655371 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-21-A12 3',
mRNA sequence
Length = 386
Score = 89.7 bits (45), Expect = 5e-016
Identities = 100/117 (85%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||| || ||||| | ||| || ||||| ||||||||||| |||||||||
Sbjct: 377 atcaagaagcatgcgtgtatctcgagcagtatcatcgggtggcactcaacggttggtcaa 318
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgag 277
||| || |||| ||||| ||||| ||||| || ||||||||||||||| | ||||||
Sbjct: 317 tggcca-ggatcgagaacatgacaatcctcggtgaggatgttcatgtgagcgatgag 262
>gb|BP657338.1|BP657338 BP657338 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-30-O11 3',
mRNA sequence
Length = 427
Score = 87.7 bits (44), Expect = 2e-015
Identities = 160/196 (81%), Gaps = 2/196 (1%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
||||||||||||||| | ||||| | ||| || ||||| |||||||| || |||||||||
Sbjct: 381 atcaagaagcatgct-gtatctcgaccagtatcatcgggtggcactccaccgttggtcaa 323
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtg-tgtgatgaggt 279
||||| |||| ||||| ||||| ||||| || ||||||||||||||| | |||||| |
Sbjct: 322 tgggccaggatcgagaacatgacgatcctcggtgaggatgttcatgtgaggcgatgagat 263
Query: 280 gtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcc 339
|| |||||| | || ||| || ||||||| || |||||||| |||| ||| |||||||
Sbjct: 262 ctatagcaattgaggagtttttttcccacacaaggagatcaaatcaaacatcttgaagcc 203
Query: 340 tgagatcgtcatgtga 355
||||| || ||||||
Sbjct: 202 agagatagtgatgtga 187
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 330,527
Number of Sequences: 1013581
Number of extensions: 330527
Number of successful extensions: 26050
Number of sequences better than 0.5: 67
Number of HSP's better than 0.5 without gapping: 65
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 25831
Number of HSP's gapped (non-prelim): 209
length of query: 638
length of database: 908,940,872
effective HSP length: 20
effective length of query: 618
effective length of database: 888,669,252
effective search space: 549197597736
effective search space used: 549197597736
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)