BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521462.2.2
(1311 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF651755.1|CF651755 04-L020359-066-002-G01-SP6P MPIZ-ADI... 139 1e-030
gb|AY052265.1| Arabidopsis thaliana At2g44680/F16B22.17 mRN... 139 1e-030
gb|AY060523.1| Arabidopsis thaliana At2g44680/F16B22.17 mRN... 139 1e-030
gb|AY062585.1| Arabidopsis thaliana putative casein kinase ... 139 1e-030
gb|AY093344.1| Arabidopsis thaliana putative casein kinase ... 139 1e-030
emb|AX507695.1| Sequence 2390 from Patent WO0216655 139 1e-030
gb|AY088075.1| Arabidopsis thaliana clone 40953 mRNA, compl... 139 1e-030
ref|NM_130032.2| Arabidopsis thaliana protein kinase CK2 re... 139 1e-030
ref|NM_180090.1| Arabidopsis thaliana protein kinase CK2 re... 139 1e-030
gb|U03984.1|ATU03984 Arabidopsis thaliana casein kinase II ... 125 2e-026
gb|BT005279.1| Arabidopsis thaliana At4g17640 mRNA, complet... 125 2e-026
gb|AY085899.1| Arabidopsis thaliana clone 19505 mRNA, compl... 125 2e-026
emb|BX827683.1|CNS0A2YU Arabidopsis thaliana Full-length cD... 125 2e-026
dbj|AK119067.1| Arabidopsis thaliana At4g17640 mRNA for put... 125 2e-026
ref|NM_117872.2| Arabidopsis thaliana CKB2; protein kinase ... 125 2e-026
gb|L22563.1|ATHCKIB Arabidopsis thaliana casein kinase II b... 121 3e-025
ref|NM_124079.2| Arabidopsis thaliana CKB1; protein kinase ... 121 3e-025
ref|NM_203167.1| Arabidopsis thaliana CKB1; protein kinase ... 121 3e-025
gb|AV824835.1|AV824835 AV824835 RAFL6 Arabidopsis thaliana ... 119 1e-024
ref|NM_001036949.1| Arabidopsis thaliana CKB1; protein kina... 117 5e-024
gb|AC003672.3| Arabidopsis thaliana chromosome 2 clone F16B... 109 1e-021
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 109 1e-021
emb|BX830065.1|CNS0A25O Arabidopsis thaliana Full-length cD... 105 2e-020
gb|CB259616.1|CB259616 35-E9536-013-002-F09-T7R MPIZ-ADIS-0... 103 8e-020
dbj|AB025609.1| Arabidopsis thaliana genomic DNA, chromosom... 96 2e-017
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 96 2e-017
gb|H37389.1|H37389 15518 Lambda-PRL2 Arabidopsis thaliana c... 94 7e-017
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 90 1e-015
emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosom... 90 1e-015
emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ... 90 1e-015
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 90 1e-015
gb|AU237720.1|AU237720 AU237720 RAFL16 Arabidopsis thaliana... 82 3e-013
gb|AV551311.1|AV551311 AV551311 Arabidopsis thaliana roots ... 82 3e-013
gb|AF068318.1|AF068318 Arabidopsis thaliana regulatory subu... 82 3e-013
emb|BX832248.1|CNS0A285 Arabidopsis thaliana Full-length cD... 82 3e-013
emb|CQ803654.1| Sequence 65 from Patent WO2004035798 82 3e-013
ref|NM_115889.3| Arabidopsis thaliana CKB3; protein kinase ... 82 3e-013
emb|AL089456.1|CNS00TAQ Arabidopsis thaliana genome survey ... 70 1e-009
gb|T42848.1|T42848 6111 Lambda-PRL2 Arabidopsis thaliana cD... 70 1e-009
gb|AV825757.1|AV825757 AV825757 RAFL7 Arabidopsis thaliana ... 70 1e-009
gb|AU239951.1|AU239951 AU239951 RAFL21 Arabidopsis thaliana... 70 1e-009
gb|CC797462.1|CC797462 SALK_144967.54.25.x Arabidopsis thal... 68 4e-009
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 68 4e-009
emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome ... 68 4e-009
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 68 4e-009
gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthes... 62 3e-007
gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E1... 60 1e-006
emb|AJ527175.1|ATH527175 Arabidopsis thaliana T-DNA flankin... 58 4e-006
emb|BX822193.1|CNS0A6ZY Arabidopsis thaliana Full-length cD... 56 2e-005
gb|T42705.1|T42705 5968 Lambda-PRL2 Arabidopsis thaliana cD... 52 2e-004
gb|AI993201.1|AI993201 701495685 A. thaliana, Ohio State cl... 50 0.001
emb|BX831794.1|CNS0A14B Arabidopsis thaliana Full-length cD... 50 0.001
gb|CW841483.1|CW841483 ET11267.Ds5.03.20.2003.jw84.804 Arab... 48 0.004
gb|T45841.1|T45841 9104 Lambda-PRL2 Arabidopsis thaliana cD... 44 0.061
gb|BE039089.1|BE039089 AB09E03 AB Arabidopsis thaliana cDNA... 42 0.24
gb|AV793860.1|AV793860 AV793860 RAFL8 Arabidopsis thaliana ... 42 0.24
>gb|CF651755.1|CF651755 04-L020359-066-002-G01-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001G012Q 5-PRIME, mRNA sequence
Length = 902
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 62 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 121
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 122 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 181
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 182 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 241
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 242 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 301
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 302 gctgctgagatgttatatggtcttattcatgttcgttatatt 343
>gb|AY052265.1| Arabidopsis thaliana At2g44680/F16B22.17 mRNA, complete cds
Length = 1297
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 432 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 491
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 492 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 551
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 552 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 611
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 612 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 671
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 672 gctgctgagatgttatatggtcttattcatgttcgttatatt 713
>gb|AY060523.1| Arabidopsis thaliana At2g44680/F16B22.17 mRNA, complete cds
Length = 849
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 244 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 303
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 304 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 363
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 364 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 423
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 424 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 483
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 484 gctgctgagatgttatatggtcttattcatgttcgttatatt 525
>gb|AY062585.1| Arabidopsis thaliana putative casein kinase II beta subunit
(At2g44680; F16B22.17) mRNA, complete cds
Length = 1300
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 435 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 494
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 495 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 554
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 555 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 614
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 615 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 674
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 675 gctgctgagatgttatatggtcttattcatgttcgttatatt 716
>gb|AY093344.1| Arabidopsis thaliana putative casein kinase II beta subunit
(At2g44680) mRNA, complete cds
Length = 920
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 244 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 303
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 304 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 363
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 364 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 423
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 424 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 483
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 484 gctgctgagatgttatatggtcttattcatgttcgttatatt 525
>emb|AX507695.1| Sequence 2390 from Patent WO0216655
Length = 852
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 244 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 303
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 304 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 363
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 364 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 423
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 424 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 483
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 484 gctgctgagatgttatatggtcttattcatgttcgttatatt 525
>gb|AY088075.1| Arabidopsis thaliana clone 40953 mRNA, complete sequence
Length = 1304
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 435 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 494
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 495 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 554
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 555 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 614
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 615 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 674
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 675 gctgctgagatgttatatggtcttattcatgttcgttatatt 716
>ref|NM_130032.2| Arabidopsis thaliana protein kinase CK2 regulator AT2G44680
transcript variant AT2G44680.1 mRNA, complete cds
Length = 1369
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 435 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 494
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 495 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 554
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 555 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 614
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 615 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 674
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 675 gctgctgagatgttatatggtcttattcatgttcgttatatt 716
>ref|NM_180090.1| Arabidopsis thaliana protein kinase CK2 regulator AT2G44680
transcript variant AT2G44680.2 mRNA, complete cds
Length = 1392
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 435 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 494
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 495 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 554
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 555 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 614
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
||||||||||| || ||||||||||||| || ||||| || |||| | | ||||||
Sbjct: 615 gatgttgaatcatcaaatggtgatatgtttactgaagaacagcatgagatggtggaatca 674
Query: 664 gctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 675 gctgctgagatgttatatggtcttattcatgttcgttatatt 716
>gb|U03984.1|ATU03984 Arabidopsis thaliana casein kinase II beta subunit CKB2 mRNA,
complete cds
Length = 1229
Score = 125 bits (63), Expect = 2e-026
Identities = 231/287 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 361 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 420
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 421 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 480
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 481 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 540
Query: 588 acttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaaaa 647
|||||| |||| || ||||| || ||||| |||||||| ||||| ||||| || || ||
Sbjct: 541 ccttgatttgattttggatgtggagtcttcgcatggtgagatgtttacagaggaacagaa 600
Query: 648 tgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||| | || || ||||| || |||||||| |||||| |||||||||
Sbjct: 601 tgaattgatcgagtcagcagcagagatgctatatggaatgattcatg 647
>gb|BT005279.1| Arabidopsis thaliana At4g17640 mRNA, complete cds
Length = 849
Score = 125 bits (63), Expect = 2e-026
Identities = 231/287 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 228 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 287
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 288 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 347
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 348 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 407
Query: 588 acttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaaaa 647
|||||| |||| || ||||| || ||||| |||||||| ||||| ||||| || || ||
Sbjct: 408 ccttgatttgattttggatgtggagtcttcgcatggtgagatgtttacagaggaacagaa 467
Query: 648 tgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||| | || || ||||| || |||||||| |||||| |||||||||
Sbjct: 468 tgaattgatcgagtcagcagcagagatgctatatggaatgattcatg 514
>gb|AY085899.1| Arabidopsis thaliana clone 19505 mRNA, complete sequence
Length = 1329
Score = 125 bits (63), Expect = 2e-026
Identities = 231/287 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 469 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 528
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 529 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 588
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 589 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 648
Query: 588 acttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaaaa 647
|||||| |||| || ||||| || ||||| |||||||| ||||| ||||| || || ||
Sbjct: 649 ccttgatttgattttggatgtggagtcttcgcatggtgagatgtttacagaggaacagaa 708
Query: 648 tgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||| | || || ||||| || |||||||| |||||| |||||||||
Sbjct: 709 tgaattgatcgagtcagcagcagagatgctatatggaatgattcatg 755
>emb|BX827683.1|CNS0A2YU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH10ZB06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1166
Score = 125 bits (63), Expect = 2e-026
Identities = 231/287 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 261 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 320
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 321 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 380
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 381 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 440
Query: 588 acttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaaaa 647
|||||| |||| || ||||| || ||||| |||||||| ||||| ||||| || || ||
Sbjct: 441 ccttgatttgattttggatgtggagtcttcgcatggtgagatgtttacagaggaacagaa 500
Query: 648 tgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||| | || || ||||| || |||||||| |||||| |||||||||
Sbjct: 501 tgaattgatcgagtcagcagcagagatgctatatggaatgattcatg 547
>dbj|AK119067.1| Arabidopsis thaliana At4g17640 mRNA for putative casein kinase II
beta chain CKB2, complete cds, clone: RAFL21-41-H19
Length = 1212
Score = 125 bits (63), Expect = 2e-026
Identities = 231/287 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 308 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 367
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 368 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 427
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 428 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 487
Query: 588 acttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaaaa 647
|||||| |||| || ||||| || ||||| |||||||| ||||| ||||| || || ||
Sbjct: 488 ccttgatttgattttggatgtggagtcttcgcatggtgagatgtttacagaggaacagaa 547
Query: 648 tgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||| | || || ||||| || |||||||| |||||| |||||||||
Sbjct: 548 tgaattgatcgagtcagcagcagagatgctatatggaatgattcatg 594
>ref|NM_117872.2| Arabidopsis thaliana CKB2; protein kinase CK2 regulator AT4G17640
(CKB2) mRNA, complete cds
Length = 1374
Score = 125 bits (63), Expect = 2e-026
Identities = 231/287 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 469 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 528
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 529 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 588
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 589 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 648
Query: 588 acttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaaaa 647
|||||| |||| || ||||| || ||||| |||||||| ||||| ||||| || || ||
Sbjct: 649 ccttgatttgattttggatgtggagtcttcgcatggtgagatgtttacagaggaacagaa 708
Query: 648 tgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||| | || || ||||| || |||||||| |||||| |||||||||
Sbjct: 709 tgaattgatcgagtcagcagcagagatgctatatggaatgattcatg 755
>gb|L22563.1|ATHCKIB Arabidopsis thaliana casein kinase II beta subunit CKB1 mRNA,
complete cds
Length = 1285
Score = 121 bits (61), Expect = 3e-025
Identities = 232/289 (80%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || ||||||||||||||||||||||||||||| || || |||||
Sbjct: 381 gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca 440
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| ||| || || || || || ||||| |||||||||||
Sbjct: 441 tggatatcttggttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgat 500
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| |||||| | ||||| || |||| | |||||| || || || ||
Sbjct: 501 tacattcaagatgacttcaacttgtgtggactcagcagtctagttccctactacgagtac 560
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
|| |||||| |||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 561 gctcttgatttgattttggatgttgaatcttctcaaggagagatgtttacagaggaacag 620
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||||| | || || ||||| ||||||||| | |||||| |||||||||
Sbjct: 621 aatgaattgatcgagtcagcagctgagatgttgtatggactgattcatg 669
>ref|NM_124079.2| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080
(CKB1) transcript variant AT5G47080.1 mRNA, complete cds
Length = 1372
Score = 121 bits (61), Expect = 3e-025
Identities = 232/289 (80%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || ||||||||||||||||||||||||||||| || || |||||
Sbjct: 392 gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca 451
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| ||| || || || || || ||||| |||||||||||
Sbjct: 452 tggatatcttggttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgat 511
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| |||||| | ||||| || |||| | |||||| || || || ||
Sbjct: 512 tacattcaagatgacttcaacttgtgtggactcagcagtctagttccctactacgagtac 571
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
|| |||||| |||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 572 gctcttgatttgattttggatgttgaatcttctcaaggagagatgtttacagaggaacag 631
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||||| | || || ||||| ||||||||| | |||||| |||||||||
Sbjct: 632 aatgaattgatcgagtcagcagctgagatgttgtatggactgattcatg 680
>ref|NM_203167.1| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080
(CKB1) transcript variant AT5G47080.2 mRNA, complete cds
Length = 1562
Score = 121 bits (61), Expect = 3e-025
Identities = 232/289 (80%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || ||||||||||||||||||||||||||||| || || |||||
Sbjct: 413 gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca 472
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| ||| || || || || || ||||| |||||||||||
Sbjct: 473 tggatatcttggttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgat 532
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| |||||| | ||||| || |||| | |||||| || || || ||
Sbjct: 533 tacattcaagatgacttcaacttgtgtggactcagcagtctagttccctactacgagtac 592
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
|| |||||| |||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 593 gctcttgatttgattttggatgttgaatcttctcaaggagagatgtttacagaggaacag 652
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||||| | || || ||||| ||||||||| | |||||| |||||||||
Sbjct: 653 aatgaattgatcgagtcagcagctgagatgttgtatggactgattcatg 701
>gb|AV824835.1|AV824835 AV824835 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-77-N13 5',
mRNA sequence
Length = 652
Score = 119 bits (60), Expect = 1e-024
Identities = 178/218 (81%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 434 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 493
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 494 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 553
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 554 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 613
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaaga 641
||||||||||| || |||| |||||||| || |||||
Sbjct: 614 gatgttgaatcatcaaatggngatatgttnactgaaga 651
>ref|NM_001036949.1| Arabidopsis thaliana CKB1; protein kinase CK2 regulator AT5G47080
(CKB1) transcript variant AT5G47080.3 mRNA, complete cds
Length = 1595
Score = 117 bits (59), Expect = 5e-024
Identities = 218/271 (80%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
||||||||||||||||||||||||||||| || || ||||| ||||| || ||||| |||
Sbjct: 464 gaagaatcagatgtgagtggttctgatggagaggacacttcatggatatcttggttttgt 523
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| ||| || || || || || ||||| ||||||||||| ||||| |||||||| |||
Sbjct: 524 aatctaagaggaaacgagttcttttgtgaagttgatgatgattacattcaagatgacttc 583
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
||| | ||||| || |||| | |||||| || || || || || |||||| |||| ||
Sbjct: 584 aacttgtgtggactcagcagtctagttccctactacgagtacgctcttgatttgattttg 643
Query: 604 gatgttgaatcttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatca 663
|||||||||||||| || || || ||||| ||||| || || |||||| | || || |||
Sbjct: 644 gatgttgaatcttctcaaggagagatgtttacagaggaacagaatgaattgatcgagtca 703
Query: 664 gctgctgagatgctctatggattgattcatg 694
|| ||||||||| | |||||| |||||||||
Sbjct: 704 gcagctgagatgttgtatggactgattcatg 734
>gb|AC003672.3| Arabidopsis thaliana chromosome 2 clone F16B22 map m336, complete
sequence
Length = 109375
Score = 109 bits (55), Expect = 1e-021
Identities = 157/191 (82%)
Strand = Plus / Minus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 48338 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 48279
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 48278 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 48219
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 48218 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 48159
Query: 604 gatgttgaatc 614
|||||||||||
Sbjct: 48158 gatgttgaatc 48148
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 658 gaatcagctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 48019 gaatcagctgctgagatgttatatggtcttattcatgttcgttatatt 47972
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 109 bits (55), Expect = 1e-021
Identities = 157/191 (82%)
Strand = Plus / Minus
Query: 424 gaagaatcagatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgt 483
|||| |||||||||||||||||| || || || ||||| || ||||| |||||||| |||
Sbjct: 18434904 gaaggatcagatgtgagtggttcagaaggtgatgatacctcttggatctcatggttttgt 18434845
Query: 484 agcttaaagggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttc 543
| || | || ||||| ||||||||||| || ||||| || || |||||||||||||||
Sbjct: 18434844 aatttgagagggaatgagtttttctgtgaagtagatgaagattatatacaagatgatttc 18434785
Query: 544 aacctctgtgggctaagcaaccaagttccatattatgactatgcacttgatctgatatta 603
|| |||||||| | || |||||||| || ||||| |||||||||||||| || |||
Sbjct: 18434784 aatctctgtggtttgagtggtcaagttccttactatgattatgcacttgatctcatttta 18434725
Query: 604 gatgttgaatc 614
|||||||||||
Sbjct: 18434724 gatgttgaatc 18434714
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 565 caagttccatattatgactatgcacttgatctgatattagatgttgaatc 614
|||||||| || ||||| |||||||||||||| || ||||||||||||||
Sbjct: 18228698 caagttccttactatgattatgcacttgatctcattttagatgttgaatc 18228747
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 658 gaatcagctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 18434585 gaatcagctgctgagatgttatatggtcttattcatgttcgttatatt 18434538
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 658 gaatcagctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 18226637 gaatcagctgctgagatgttatatggtcttattcatgttcgttatatt 18226684
>emb|BX830065.1|CNS0A25O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB57ZB07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1408
Score = 105 bits (53), Expect = 2e-020
Identities = 230/289 (79%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || |||||||||||||| ||| |||||||||| || || |||||
Sbjct: 386 gaatcagacacagatagtgaagaatcagatgttagttgttctgatggagaggacacttca 445
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| ||| || || || || || ||||| |||||||||||
Sbjct: 446 tggatatcttggttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgat 505
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| |||||| | ||||| || |||| | |||||| || || || ||
Sbjct: 506 tacattcaagatgacttcaacttgtgtggactcagcagtctagttccctactacgagtac 565
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
|| |||||| |||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 566 gctcttgatttgattttggatgttgaatcttctcaaggagagatgtttacagaggaacag 625
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatg 694
|||||| | || || ||||| ||||||||| | |||||| |||||||||
Sbjct: 626 aatgaattgatcgagtcagcagctgagatgttgtatggactgattcatg 674
>gb|CB259616.1|CB259616 35-E9536-013-002-F09-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770F092Q 5-PRIME, mRNA sequence
Length = 592
Score = 103 bits (52), Expect = 8e-020
Identities = 196/244 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 342 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 401
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 402 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 461
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 462 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 521
Query: 588 acttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaaaa 647
|||||| |||| || ||||| || ||||| |||||||| ||||| ||||| || || ||
Sbjct: 522 ccttgatttgattttggatgtggagtcttcgcatggtgagatgtttacagaggaacagaa 581
Query: 648 tgaa 651
||||
Sbjct: 582 tgaa 585
>dbj|AB025609.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K14A3
Length = 34498
Score = 95.6 bits (48), Expect = 2e-017
Identities = 171/212 (80%)
Strand = Plus / Minus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || ||||||||||||||||||||||||||||| || || |||||
Sbjct: 8826 gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca 8767
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| ||| || || || || || ||||| |||||||||||
Sbjct: 8766 tggatatcttggttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgat 8707
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| |||||| | ||||| || |||| | |||||| || || || ||
Sbjct: 8706 tacattcaagatgacttcaacttgtgtggactcagcagtctagttccctactacgagtac 8647
Query: 586 gcacttgatctgatattagatgttgaatcttc 617
|| |||||| |||| || ||||||||||||||
Sbjct: 8646 gctcttgatttgattttggatgttgaatcttc 8615
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 95.6 bits (48), Expect = 2e-017
Identities = 171/212 (80%)
Strand = Plus / Minus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || ||||||||||||||||||||||||||||| || || |||||
Sbjct: 19143213 gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca 19143154
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| ||| || || || || || ||||| |||||||||||
Sbjct: 19143153 tggatatcttggttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgat 19143094
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
||||| |||||||| |||||| | ||||| || |||| | |||||| || || || ||
Sbjct: 19143093 tacattcaagatgacttcaacttgtgtggactcagcagtctagttccctactacgagtac 19143034
Query: 586 gcacttgatctgatattagatgttgaatcttc 617
|| |||||| |||| || ||||||||||||||
Sbjct: 19143033 gctcttgatttgattttggatgttgaatcttc 19143002
>gb|H37389.1|H37389 15518 Lambda-PRL2 Arabidopsis thaliana cDNA clone 180M8T7, mRNA
sequence
Length = 447
Score = 93.7 bits (47), Expect = 7e-017
Identities = 230/293 (78%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || ||||||||| |||| || || || |||||
Sbjct: 137 atcagacacagacagcgaagaatcagaggtcagtggttctnatggagaggacacctcgtg 196
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 197 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 256
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || | ||| || ||| | ||||| || ||| | |||||||| || || | ||||||
Sbjct: 257 catccaggntgactttaacttgtgtggactcagccatcaagttccttactacggctatgc 316
Query: 588 acttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaaaa 647
||| || |||| || ||||| || ||||| |||||||| ||||| ||||| | || ||
Sbjct: 317 ccttnatttgattttggatgtggagtcttcgcatggtgagatgtttacagaggnacagaa 376
Query: 648 tgaacttattgaatcagctgctgagatgctctatggattgattcatgttcggt 700
|||| | || | ||||| || |||||||| |||||| ||||||||| |||||
Sbjct: 377 tgaattgatcgngtcagcngcagagatgctatatggaatgattcatgctcggt 429
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 89.7 bits (45), Expect = 1e-015
Identities = 174/217 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 5738758 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 5738817
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 5738818 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 5738877
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 5738878 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 5738937
Query: 588 acttgatctgatattagatgttgaatcttcccatggt 624
|||||| |||| || ||||| || ||||| ||||||
Sbjct: 5738938 ccttgatttgattttggatgtggagtcttcgcatggt 5738974
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46
Length = 198788
Score = 89.7 bits (45), Expect = 1e-015
Identities = 174/217 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 180139 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 180198
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 180199 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 180258
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 180259 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 180318
Query: 588 acttgatctgatattagatgttgaatcttcccatggt 624
|||||| |||| || ||||| || ||||| ||||||
Sbjct: 180319 ccttgatttgattttggatgtggagtcttcgcatggt 180355
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8
Length = 207674
Score = 89.7 bits (45), Expect = 1e-015
Identities = 174/217 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 190774 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 190833
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 190834 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 190893
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 190894 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 190953
Query: 588 acttgatctgatattagatgttgaatcttcccatggt 624
|||||| |||| || ||||| || ||||| ||||||
Sbjct: 190954 ccttgatttgattttggatgtggagtcttcgcatggt 190990
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 89.7 bits (45), Expect = 1e-015
Identities = 174/217 (80%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 9826015 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 9826074
Query: 468 gatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgacta 527
||| || |||||||| | | | || || || || |||||||| ||||||||||| ||
Sbjct: 9826075 gatatcttggttctgcaaccttcgtgggaacgagttcttctgtgaagttgatgatgatta 9826134
Query: 528 catacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactatgc 587
||| || ||||| || ||| | ||||| || ||| | |||||||| || || ||||||||
Sbjct: 9826135 catccaggatgactttaacttgtgtggactcagccatcaagttccttactacgactatgc 9826194
Query: 588 acttgatctgatattagatgttgaatcttcccatggt 624
|||||| |||| || ||||| || ||||| ||||||
Sbjct: 9826195 ccttgatttgattttggatgtggagtcttcgcatggt 9826231
>gb|AU237720.1|AU237720 AU237720 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-51-O05 5',
mRNA sequence
Length = 671
Score = 81.8 bits (41), Expect = 3e-013
Identities = 230/293 (78%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 288 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 347
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 348 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 407
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 408 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 467
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
||||||||||| || ||||||||||| ||||| | |||| ||||| || || || ||
Sbjct: 468 gcacttgatctcattttagatgttgatgcttccaacagtgagatgtttactgatgaacag 527
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatgttcg 698
||||| | | |||||||||||||||||||| ||||| | |||||||||||
Sbjct: 528 catgaaatggtggaatcagctgctgagatgctatatggtcttattcatgttcg 580
>gb|AV551311.1|AV551311 AV551311 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ125a09R 5', mRNA sequence
Length = 431
Score = 81.8 bits (41), Expect = 3e-013
Identities = 230/293 (78%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 3 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 62
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 63 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 122
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 123 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 182
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
||||||||||| || ||||||||||| ||||| | |||| ||||| || || || ||
Sbjct: 183 gcacttgatctcattttagatgttgatgcttccaacagtgagatgtttactgatgaacag 242
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatgttcg 698
||||| | | |||||||||||||||||||| ||||| | |||||||||||
Sbjct: 243 catgaaatggtggaatcagctgctgagatgctatatggtcttattcatgttcg 295
>gb|AF068318.1|AF068318 Arabidopsis thaliana regulatory subunit of protein kinase CK2
(CKB3) mRNA, complete cds
Length = 1080
Score = 81.8 bits (41), Expect = 3e-013
Identities = 230/293 (78%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 349 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 408
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 409 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 468
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 469 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 528
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
||||||||||| || ||||||||||| ||||| | |||| ||||| || || || ||
Sbjct: 529 gcacttgatctcattttagatgttgatgcttccaacagtgagatgtttactgatgaacag 588
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatgttcg 698
||||| | | |||||||||||||||||||| ||||| | |||||||||||
Sbjct: 589 catgaaatggtggaatcagctgctgagatgctatatggtcttattcatgttcg 641
>emb|BX832248.1|CNS0A285 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH60ZH08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1837
Score = 81.8 bits (41), Expect = 3e-013
Identities = 116/141 (82%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || ||||||||||||||||||||||||||||| || || |||||
Sbjct: 563 gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca 622
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| ||| || || || || || ||||| |||||||||||
Sbjct: 623 tggatatcttggttttgtaatctaagaggaaacgagttcttttgtgaagttgatgatgat 682
Query: 526 tacatacaagatgatttcaac 546
||||| |||||||| ||||||
Sbjct: 683 tacattcaagatgacttcaac 703
>emb|CQ803654.1| Sequence 65 from Patent WO2004035798
Length = 831
Score = 81.8 bits (41), Expect = 3e-013
Identities = 230/293 (78%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 208 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 267
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 268 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 327
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 328 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 387
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
||||||||||| || ||||||||||| ||||| | |||| ||||| || || || ||
Sbjct: 388 gcacttgatctcattttagatgttgatgcttccaacagtgagatgtttactgatgaacag 447
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatgttcg 698
||||| | | |||||||||||||||||||| ||||| | |||||||||||
Sbjct: 448 catgaaatggtggaatcagctgctgagatgctatatggtcttattcatgttcg 500
>ref|NM_115889.3| Arabidopsis thaliana CKB3; protein kinase CK2 regulator AT3G60250
(CKB3) mRNA, complete cds
Length = 1354
Score = 81.8 bits (41), Expect = 3e-013
Identities = 230/293 (78%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 359 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 418
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 419 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 478
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 479 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 538
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
||||||||||| || ||||||||||| ||||| | |||| ||||| || || || ||
Sbjct: 539 gcacttgatctcattttagatgttgatgcttccaacagtgagatgtttactgatgaacag 598
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatgttcg 698
||||| | | |||||||||||||||||||| ||||| | |||||||||||
Sbjct: 599 catgaaatggtggaatcagctgctgagatgctatatggtcttattcatgttcg 651
>emb|AL089456.1|CNS00TAQ Arabidopsis thaliana genome survey sequence SP6 end of BAC T3P6 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 300
Score = 69.9 bits (35), Expect = 1e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 148 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 207
Query: 468 gatttcatggttctg 482
||| || ||||||||
Sbjct: 208 gatatcttggttctg 222
>gb|T42848.1|T42848 6111 Lambda-PRL2 Arabidopsis thaliana cDNA clone 118A10T7, mRNA
sequence
Length = 544
Score = 69.9 bits (35), Expect = 1e-009
Identities = 228/293 (77%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 42 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 101
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 102 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 161
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 162 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 221
Query: 586 gcacttgatctgatattagatgttgaatcttcccatggtgatatgttgacagaagagcaa 645
||||||| || || ||||||||||| ||||| | |||| ||||| || || || ||
Sbjct: 222 ncacttganctcattttagatgttgatgcttccaacagtgagatgtttactgatgaacag 281
Query: 646 aatgaacttattgaatcagctgctgagatgctctatggattgattcatgttcg 698
||||| | | |||||||||||||||||||| ||||| | |||||||||||
Sbjct: 282 catgaaatggtggaatcagctgctgagatgctatatggtcttattcatgttcg 334
>gb|AV825757.1|AV825757 AV825757 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-14-E09 5',
mRNA sequence
Length = 614
Score = 69.9 bits (35), Expect = 1e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || ||||||||||||||||||||||||||||| || || |||||
Sbjct: 393 gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca 452
Query: 466 tggatttcatggttctgta 484
||||| || ||||| ||||
Sbjct: 453 tggatatcttggttttgta 471
>gb|AU239951.1|AU239951 AU239951 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-41-H19 5',
mRNA sequence
Length = 551
Score = 69.9 bits (35), Expect = 1e-009
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 408 atcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcgtg 467
|||||| || ||||||||||||||||| || |||||||||||||| || || || |||||
Sbjct: 308 atcagacacagacagcgaagaatcagaggtcagtggttctgatggagaggacacctcgtg 367
Query: 468 gatttcatggttctg 482
||| || ||||||||
Sbjct: 368 gatatcttggttctg 382
>gb|CC797462.1|CC797462 SALK_144967.54.25.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_144967.54.25.x,
DNA sequence
Length = 415
Score = 67.9 bits (34), Expect = 4e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
|||||||| || || || ||||||||||||||||||||||||||||| || || |||||
Sbjct: 75 gaatcagacacagatagtgaagaatcagatgtgagtggttctgatggagaggacacttca 16
Query: 466 tggatttcatggtt 479
||||| || |||||
Sbjct: 15 tggatatcttggtt 2
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 67.9 bits (34), Expect = 4e-009
Identities = 163/206 (79%)
Strand = Plus / Minus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 22229943 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 22229884
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 22229883 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 22229824
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 22229823 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 22229764
Query: 586 gcacttgatctgatattagatgttga 611
||||||||||| || |||||||||||
Sbjct: 22229763 gcacttgatctcattttagatgttga 22229738
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 658 gaatcagctgctgagatgctctatggattgattcatgttcg 698
|||||||||||||||||||| ||||| | |||||||||||
Sbjct: 22229603 gaatcagctgctgagatgctatatggtcttattcatgttcg 22229563
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5
Length = 88548
Score = 67.9 bits (34), Expect = 4e-009
Identities = 163/206 (79%)
Strand = Plus / Minus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 46669 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 46610
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 46609 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 46550
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 46549 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 46490
Query: 586 gcacttgatctgatattagatgttga 611
||||||||||| || |||||||||||
Sbjct: 46489 gcacttgatctcattttagatgttga 46464
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 658 gaatcagctgctgagatgctctatggattgattcatgttcg 698
|||||||||||||||||||| ||||| | |||||||||||
Sbjct: 46329 gaatcagctgctgagatgctatatggtcttattcatgttcg 46289
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 67.9 bits (34), Expect = 4e-009
Identities = 163/206 (79%)
Strand = Plus / Minus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 22282644 gaatcggaaactgatagtgaagggtctgatgtgagtggatcggagggtgatgatacgtcg 22282585
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| || ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 22282584 tggatctcttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 22282525
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 22282524 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 22282465
Query: 586 gcacttgatctgatattagatgttga 611
||||||||||| || |||||||||||
Sbjct: 22282464 gcacttgatctcattttagatgttga 22282439
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 658 gaatcagctgctgagatgctctatggattgattcatgttcg 698
|||||||||||||||||||| ||||| | |||||||||||
Sbjct: 22282304 gaatcagctgctgagatgctatatggtcttattcatgttcg 22282264
>gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthesis initiation factor 4G (EIF4G)
gene, complete cds
Length = 10989
Score = 61.9 bits (31), Expect = 3e-007
Identities = 142/179 (79%)
Strand = Plus / Minus
Query: 433 gatgtgagtggttctgatggggaagatacttcgtggatttcatggttctgtagcttaaag 492
||||||||||| || || || || ||||| |||||||| || ||||| |||| || |
Sbjct: 9533 gatgtgagtggatcggagggtgatgatacgtcgtggatctcttggttttgtaatttgaga 9474
Query: 493 ggcaatgaatttttctgtgaggttgatgatgactacatacaagatgatttcaacctctgt 552
|| ||||| || |||||||| || ||||| || || || |||||||||||||| || |||
Sbjct: 9473 gggaatgatttcttctgtgaagtcgatgaagattatattcaagatgatttcaatctttgt 9414
Query: 553 gggctaagcaaccaagttccatattatgactatgcacttgatctgatattagatgttga 611
|| |||| ||||| || || ||||| |||||||||||||| || |||||||||||
Sbjct: 9413 ggtttaagtggtcaagtcccttactatgattatgcacttgatctcattttagatgttga 9355
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 658 gaatcagctgctgagatgctctatggattgattcatgttcg 698
|||||||||||||||||||| ||||| | |||||||||||
Sbjct: 9220 gaatcagctgctgagatgctatatggtcttattcatgttcg 9180
>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07,
complete sequence
Length = 109741
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 565 caagttccatattatgactatgcacttgatctgatattagatgttgaatc 614
|||||||| || ||||| |||||||||||||| || ||||||||||||||
Sbjct: 51889 caagttccttactatgattatgcacttgatctcattttagatgttgaatc 51938
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 658 gaatcagctgctgagatgctctatggattgattcatgttcggtatatt 705
|||||||||||||||||| | ||||| | ||||||||||| ||||||
Sbjct: 49828 gaatcagctgctgagatgttatatggtcttattcatgttcgttatatt 49875
>emb|AJ527175.1|ATH527175 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
134C10
Length = 733
Score = 58.0 bits (29), Expect = 4e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 424 gaagaatcagatgtgagtggttctgatgg 452
|||||||||||||||||||||||||||||
Sbjct: 584 gaagaatcagatgtgagtggttctgatgg 612
>emb|BX822193.1|CNS0A6ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB19ZF05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1318
Score = 56.0 bits (28), Expect = 2e-005
Identities = 161/204 (78%), Gaps = 1/204 (0%)
Strand = Plus / Plus
Query: 496 aatgaatttttctgtgaggtt-gatgatgactacatacaagatgatttcaacctctgtgg 554
||||| || |||||||| ||| ||||| || || || |||||||||||||| || |||||
Sbjct: 450 aatgatttcttctgtgaagttcgatgaagattatattcaagatgatttcaatctttgtgg 509
Query: 555 gctaagcaaccaagttccatattatgactatgcacttgatctgatattagatgttgaatc 614
|||| ||||| || || ||||| |||||||||||||| || ||||||||||| |
Sbjct: 510 tttaagtggtcaagtcccttactatgattatgcacttgatctcattttagatgttgatgc 569
Query: 615 ttcccatggtgatatgttgacagaagagcaaaatgaacttattgaatcagctgctgagat 674
|||| | || | ||||| || || || || ||||| | | |||||||||||||||||
Sbjct: 570 ttccaacagttagatgtttactgatgaacagcatgaaatggtggaatcagctgctgagat 629
Query: 675 gctctatggattgattcatgttcg 698
||| ||||| | |||||||||||
Sbjct: 630 gctatatggtctaattcatgttcg 653
>gb|T42705.1|T42705 5968 Lambda-PRL2 Arabidopsis thaliana cDNA clone 116C22T7, mRNA
sequence
Length = 412
Score = 52.0 bits (26), Expect = 2e-004
Identities = 160/206 (77%)
Strand = Plus / Plus
Query: 406 gaatcagaaactgacagcgaagaatcagatgtgagtggttctgatggggaagatacttcg 465
||||| |||||||| || |||| || ||||||||||| || || || || ||||| |||
Sbjct: 42 gaatcggaaactgatagtgaagggtctgatgtgagtggntcggagggtgatgatacgtcg 101
Query: 466 tggatttcatggttctgtagcttaaagggcaatgaatttttctgtgaggttgatgatgac 525
||||| | ||||| |||| || | || ||||| || |||||||| || ||||| ||
Sbjct: 102 tggatctnttggttttgtaatttgagagggaatgatttcttctgtgaagtcgatgaagat 161
Query: 526 tacatacaagatgatttcaacctctgtgggctaagcaaccaagttccatattatgactat 585
|| || |||||||||||||| || ||||| |||| ||||| || || ||||| |||
Sbjct: 162 tatattcaagatgatttcaatctttgtggtttaagtggtcaagtcccttactatgattat 221
Query: 586 gcacttgatctgatattagatgttga 611
||||||| || || |||||||||||
Sbjct: 222 ncacttganctcattttagatgttga 247
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 574,370
Number of Sequences: 1013581
Number of extensions: 574370
Number of successful extensions: 41762
Number of sequences better than 0.5: 56
Number of HSP's better than 0.5 without gapping: 54
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 40305
Number of HSP's gapped (non-prelim): 1424
length of query: 1311
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1291
effective length of database: 888,669,252
effective search space: 1147272004332
effective search space used: 1147272004332
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)