BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493976.2.1
(1294 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF083782.1| Arabidopsis thaliana clone sps811 unknown mRNA 90 1e-015
gb|AV831130.1|AV831130 AV831130 RAFL9 Arabidopsis thaliana ... 86 2e-014
gb|AV827688.1|AV827688 AV827688 RAFL9 Arabidopsis thaliana ... 84 7e-014
gb|AV828357.1|AV828357 AV828357 RAFL9 Arabidopsis thaliana ... 84 7e-014
gb|AV439843.1|AV439843 AV439843 Arabidopsis thaliana above-... 84 7e-014
gb|AV524500.1|AV524500 AV524500 Arabidopsis thaliana aboveg... 84 7e-014
gb|AV524938.2|AV524938 AV524938 Arabidopsis thaliana aboveg... 84 7e-014
gb|AV565496.1|AV565496 AV565496 Arabidopsis thaliana green ... 84 7e-014
gb|BP796409.1|BP796409 BP796409 RAFL5 Arabidopsis thaliana ... 84 7e-014
gb|BP841091.1|BP841091 BP841091 RAFL19 Arabidopsis thaliana... 84 7e-014
gb|BP844728.1|BP844728 BP844728 RAFL21 Arabidopsis thaliana... 84 7e-014
gb|BP858073.1|BP858073 BP858073 RAFL21 Arabidopsis thaliana... 84 7e-014
gb|BP860147.1|BP860147 BP860147 RAFL21 Arabidopsis thaliana... 84 7e-014
gb|BP868335.1|BP868335 BP868335 RAFL21 Arabidopsis thaliana... 84 7e-014
gb|AF360291.1| Arabidopsis thaliana putative expansin prote... 84 7e-014
gb|AY051047.1| Arabidopsis thaliana putative expansin prote... 84 7e-014
emb|AX505396.1| Sequence 91 from Patent WO0216655 84 7e-014
gb|AY089063.1| Arabidopsis thaliana clone 255048 mRNA, comp... 84 7e-014
emb|BX815073.1|CNS0ABGA Arabidopsis thaliana Full-length cD... 84 7e-014
emb|BX815362.1|CNS0ABIP Arabidopsis thaliana Full-length cD... 84 7e-014
gb|U30476.1|ATU30476 Arabidopsis thaliana expansin At-EXPA1... 84 7e-014
ref|NM_105622.2| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS ... 84 7e-014
ref|NM_179537.1| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS ... 84 7e-014
ref|NM_179538.1| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS ... 84 7e-014
gb|BE529402.1|BE529402 M74M20STM Arabidopsis developing see... 82 3e-013
gb|AV824246.1|AV824246 AV824246 RAFL6 Arabidopsis thaliana ... 82 3e-013
gb|AV826552.1|AV826552 AV826552 RAFL8 Arabidopsis thaliana ... 82 3e-013
gb|CB258037.1|CB258037 74-E011082-014-003-D19-T7R MPIZ-ADIS... 82 3e-013
gb|BX840109.1|BX840109 BX840109 Arabidopsis thaliana Hormon... 82 3e-013
gb|AV551490.1|AV551490 AV551490 Arabidopsis thaliana roots ... 82 3e-013
gb|CF774488.1|CF774488 AG_FSL_37G10 Arabidopsis ag-1 35S:AG... 82 3e-013
gb|CB253351.1|CB253351 03-E010742-019-001-F13-T7R MPIZ-ADIS... 82 3e-013
gb|CB254578.1|CB254578 65-E018437-019-009-A17-T7R MPIZ-ADIS... 82 3e-013
gb|BP796889.1|BP796889 BP796889 RAFL14 Arabidopsis thaliana... 82 3e-013
gb|BP797885.1|BP797885 BP797885 RAFL14 Arabidopsis thaliana... 82 3e-013
gb|BP808794.1|BP808794 BP808794 RAFL16 Arabidopsis thaliana... 82 3e-013
gb|BP820825.1|BP820825 BP820825 RAFL19 Arabidopsis thaliana... 82 3e-013
gb|BP851619.1|BP851619 BP851619 RAFL21 Arabidopsis thaliana... 82 3e-013
gb|AF410277.1|AF410277 Arabidopsis thaliana At2g39700/F17A1... 82 3e-013
gb|AY062683.1| Arabidopsis thaliana putative expansin (At2g... 82 3e-013
gb|AY090368.1| Arabidopsis thaliana At2g37640/F13M22.14 mRN... 82 3e-013
gb|AY093338.1| Arabidopsis thaliana putative expansin (At2g... 82 3e-013
gb|AY122898.1| Arabidopsis thaliana At2g37640/F13M22.14 mRN... 82 3e-013
gb|AY072167.1| Arabidopsis thaliana putative expansin prote... 82 3e-013
gb|AY117342.1| Arabidopsis thaliana putative expansin prote... 82 3e-013
emb|AX505394.1| Sequence 89 from Patent WO0216655 82 3e-013
emb|AX506374.1| Sequence 1069 from Patent WO0216655 82 3e-013
emb|AX651740.1| Sequence 581 from Patent WO03000898 82 3e-013
gb|AY085719.1| Arabidopsis thaliana clone 17353 mRNA, compl... 82 3e-013
gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M... 82 3e-013
emb|BX818782.1|CNS0A82M Arabidopsis thaliana Full-length cD... 82 3e-013
emb|BX820188.1|CNS0A9CV Arabidopsis thaliana Full-length cD... 82 3e-013
emb|BX821366.1|CNS0A97J Arabidopsis thaliana Full-length cD... 82 3e-013
emb|BX820349.1|CNS0A9O1 Arabidopsis thaliana Full-length cD... 82 3e-013
emb|BX818958.1|CNS0A9YC Arabidopsis thaliana Full-length cD... 82 3e-013
ref|NM_126361.3| Arabidopsis thaliana ATEXPA15 (ARABIDOPSIS... 82 3e-013
ref|NM_129320.3| Arabidopsis thaliana ATEXPA3 (ARABIDOPSIS ... 82 3e-013
ref|NM_129526.2| Arabidopsis thaliana ATEXPA4 (ARABIDOPSIS ... 82 3e-013
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 82 3e-013
gb|Z37585.1|Z37585 ATTS4050 Strasbourg-A Arabidopsis thalia... 80 1e-012
gb|AY088179.1| Arabidopsis thaliana clone 42551 mRNA, compl... 78 4e-012
ref|NM_125015.1| Arabidopsis thaliana ATEXPA14 (ARABIDOPSIS... 78 4e-012
gb|N37536.1|N37536 18763 Lambda-PRL2 Arabidopsis thaliana c... 76 2e-011
gb|AV824249.1|AV824249 AV824249 RAFL6 Arabidopsis thaliana ... 76 2e-011
gb|AV524924.2|AV524924 AV524924 Arabidopsis thaliana aboveg... 76 2e-011
gb|BP824631.1|BP824631 BP824631 RAFL19 Arabidopsis thaliana... 76 2e-011
emb|BX821634.1|CNS0A9AF Arabidopsis thaliana Full-length cD... 74 7e-011
gb|CK119406.1|CK119406 212o22.p1 AtM1 Arabidopsis thaliana ... 70 1e-009
gb|BP804189.1|BP804189 BP804189 RAFL14 Arabidopsis thaliana... 70 1e-009
gb|AF083687.1| Arabidopsis thaliana clone sps111 unknown mRNA 70 1e-009
gb|BP803531.1|BP803531 BP803531 RAFL14 Arabidopsis thaliana... 68 4e-009
gb|BP804183.1|BP804183 BP804183 RAFL14 Arabidopsis thaliana... 66 2e-008
gb|BP810018.1|BP810018 BP810018 RAFL16 Arabidopsis thaliana... 66 2e-008
dbj|AK175875.1| Arabidopsis thaliana mRNA for expansin-like... 66 2e-008
ref|NM_115407.2| Arabidopsis thaliana ATEXPA16 (ARABIDOPSIS... 66 2e-008
gb|BP811357.1|BP811357 BP811357 RAFL16 Arabidopsis thaliana... 64 6e-008
gb|BP808070.1|BP808070 BP808070 RAFL16 Arabidopsis thaliana... 62 3e-007
emb|BX531046.1| Arabidopsis thaliana T-DNA flanking sequenc... 60 1e-006
gb|AU237197.1|AU237197 AU237197 RAFL16 Arabidopsis thaliana... 60 1e-006
gb|BP863611.1|BP863611 BP863611 RAFL21 Arabidopsis thaliana... 60 1e-006
emb|AX506393.1| Sequence 1088 from Patent WO0216655 60 1e-006
emb|AX651951.1| Sequence 832 from Patent WO03000898 60 1e-006
gb|AY086770.1| Arabidopsis thaliana clone 27553 mRNA, compl... 60 1e-006
gb|AC003674.3| Arabidopsis thaliana chromosome 2 clone F17A... 60 1e-006
ref|NM_129623.2| Arabidopsis thaliana ATEXPA8 (ARABIDOPSIS ... 60 1e-006
gb|BP802421.1|BP802421 BP802421 RAFL14 Arabidopsis thaliana... 58 4e-006
gb|BP803622.1|BP803622 BP803622 RAFL14 Arabidopsis thaliana... 58 4e-006
gb|BP819472.1|BP819472 BP819472 RAFL19 Arabidopsis thaliana... 58 4e-006
gb|BP844542.1|BP844542 BP844542 RAFL21 Arabidopsis thaliana... 58 4e-006
emb|BX822037.1|CNS0A93W Arabidopsis thaliana Full-length cD... 58 4e-006
dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosom... 58 4e-006
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 58 4e-006
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 58 4e-006
gb|F14125.1|F14125 ATTS5047 Versailles-VB Arabidopsis thali... 56 2e-005
gb|T45214.1|T45214 8477 Lambda-PRL2 Arabidopsis thaliana cD... 56 2e-005
gb|N38463.1|N38463 19690 Lambda-PRL2 Arabidopsis thaliana c... 56 2e-005
gb|BE039478.1|BE039478 AC04C06 AC Arabidopsis thaliana cDNA... 56 2e-005
gb|BE528504.1|BE528504 M79J05STM Arabidopsis developing see... 56 2e-005
gb|BP799539.1|BP799539 BP799539 RAFL14 Arabidopsis thaliana... 56 2e-005
gb|BP829165.1|BP829165 BP829165 RAFL19 Arabidopsis thaliana... 56 2e-005
gb|AY052247.1| Arabidopsis thaliana At1g26770/T24P13_14 mRN... 56 2e-005
gb|AY060512.1| Arabidopsis thaliana At1g26770/T24P13_14 mRN... 56 2e-005
emb|AX651780.1| Sequence 631 from Patent WO03000898 56 2e-005
gb|AY085242.1| Arabidopsis thaliana clone 14132 mRNA, compl... 56 2e-005
emb|BX816448.1|CNS0ADWQ Arabidopsis thaliana Full-length cD... 56 2e-005
gb|U30478.1|ATU30478 Arabidopsis thaliana expansin At-EXPA5... 56 2e-005
gb|AF229437.1| Arabidopsis thaliana expansin 10 (EXPA10) mR... 56 2e-005
emb|CQ805978.1| Sequence 2389 from Patent WO2004035798 56 2e-005
ref|NM_113824.2| Arabidopsis thaliana ATEXPA5 (ARABIDOPSIS ... 56 2e-005
ref|NM_102440.3| Arabidopsis thaliana ATEXPA10 (ARABIDOPSIS... 56 2e-005
gb|BE528183.1|BE528183 M70P05STM Arabidopsis developing see... 54 6e-005
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 54 6e-005
gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M... 54 6e-005
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 54 6e-005
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 54 6e-005
emb|BX531047.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 2e-004
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 52 2e-004
gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis tha... 52 2e-004
gb|AF229431.1| Arabidopsis thaliana expansin 10 (EXPA10) ge... 52 2e-004
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 52 2e-004
emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome... 52 2e-004
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 52 2e-004
gb|AI993498.1|AI993498 701496485 A. thaliana, Ohio State cl... 50 0.001
gb|AV832214.1|AV832214 AV832214 RAFL11 Arabidopsis thaliana... 50 0.001
gb|BP807650.1|BP807650 BP807650 RAFL16 Arabidopsis thaliana... 50 0.001
gb|BP823249.1|BP823249 BP823249 RAFL19 Arabidopsis thaliana... 50 0.001
gb|BP826961.1|BP826961 BP826961 RAFL19 Arabidopsis thaliana... 50 0.001
gb|BP844516.1|BP844516 BP844516 RAFL21 Arabidopsis thaliana... 50 0.001
gb|AY054586.1| Arabidopsis thaliana expansin precursor-like... 50 0.001
gb|AY064685.1| Arabidopsis thaliana expansin precursor-like... 50 0.001
gb|AY086085.1| Arabidopsis thaliana clone 21205 mRNA, compl... 50 0.001
gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4... 50 0.001
ref|NM_120304.2| Arabidopsis thaliana ATEXPA9 (ARABIDOPSIS ... 50 0.001
gb|CW841666.1|CW841666 ET11464.Ds5.04.02.2003.jw86.430 Arab... 48 0.004
gb|AV527268.1|AV527268 AV527268 Arabidopsis thaliana aboveg... 48 0.004
gb|BP832213.1|BP832213 BP832213 RAFL19 Arabidopsis thaliana... 48 0.004
gb|AI999398.1|AI999398 701555702 A. thaliana, Columbia Col-... 46 0.015
gb|AU237289.1|AU237289 AU237289 RAFL16 Arabidopsis thaliana... 46 0.015
gb|CB254180.1|CB254180 77-E010934-019-003-J20-T7R MPIZ-ADIS... 46 0.015
emb|BX823143.1|CNS0A752 Arabidopsis thaliana Full-length cD... 46 0.015
dbj|AB025615.1| Arabidopsis thaliana genomic DNA, chromosom... 46 0.015
emb|AJ595013.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.060
gb|R29778.1|R29778 12383 Lambda-PRL2 Arabidopsis thaliana c... 44 0.060
gb|CB264787.1|CB264787 36-E014661-035-002-H10-T7R MPIZ-ADIS... 44 0.060
gb|BP819501.1|BP819501 BP819501 RAFL19 Arabidopsis thaliana... 44 0.060
gb|CW801616.1|CW801616 WiscDsLox495F06 Arabidopsis thaliana... 42 0.24
gb|AY198540.1|AY198540 AY198540 Arabidopsis thaliana Landsb... 42 0.24
gb|Z29178.1|Z29178 ATTS2124 Versailles-VB Arabidopsis thali... 42 0.24
gb|AV819673.1|AV819673 AV819673 RAFL11 Arabidopsis thaliana... 42 0.24
gb|BU635169.1|BU635169 016F09 Infected Arabidopsis Leaf Ara... 42 0.24
gb|CB264576.1|CB264576 53-E014659-035-002-I14-T7R MPIZ-ADIS... 42 0.24
gb|AB038716.1|AB038716 AB038716 Arabidopsis thaliana Above-... 42 0.24
gb|AV439490.1|AV439490 AV439490 Arabidopsis thaliana above-... 42 0.24
gb|AV517928.1|AV517928 AV517928 Arabidopsis thaliana aboveg... 42 0.24
gb|BP607883.1|BP607883 BP607883 RAFL16 Arabidopsis thaliana... 42 0.24
gb|BP626962.1|BP626962 BP626962 RAFL17 Arabidopsis thaliana... 42 0.24
gb|CB253996.1|CB253996 81-E018427-019-008-A21-T7R MPIZ-ADIS... 42 0.24
gb|CB254155.1|CB254155 78-E018363-019-007-L20-T7R MPIZ-ADIS... 42 0.24
gb|BP784541.1|BP784541 BP784541 RAFL7 Arabidopsis thaliana ... 42 0.24
gb|BP840395.1|BP840395 BP840395 RAFL19 Arabidopsis thaliana... 42 0.24
gb|BT002841.1| Arabidopsis thaliana clone RAFL15-02-G05 (R2... 42 0.24
dbj|AB010694.1| Arabidopsis thaliana genomic DNA, chromosom... 42 0.24
ref|NM_123288.2| Arabidopsis thaliana ATEXPA21 (ARABIDOPSIS... 42 0.24
>gb|AF083782.1| Arabidopsis thaliana clone sps811 unknown mRNA
Length = 480
Score = 89.7 bits (45), Expect = 1e-015
Identities = 105/125 (84%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 180 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 239
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 240 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 299
Query: 320 aacaa 324
|||||
Sbjct: 300 aacaa 304
>gb|AV831130.1|AV831130 AV831130 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-84-O22 5',
mRNA sequence
Length = 383
Score = 85.7 bits (43), Expect = 2e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 184 cacgccacattctacggnggtggtgatgcttccggcacaatgggaggtgcttgtggatac 243
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 244 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 303
Query: 320 aa 321
||
Sbjct: 304 aa 305
>gb|AV827688.1|AV827688 AV827688 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-18-F04 5',
mRNA sequence
Length = 621
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 199 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 258
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 259 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 318
Query: 320 aa 321
||
Sbjct: 319 aa 320
>gb|AV828357.1|AV828357 AV828357 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-27-C10 5',
mRNA sequence
Length = 538
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 193 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 252
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 253 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 312
Query: 320 aa 321
||
Sbjct: 313 aa 314
>gb|AV439843.1|AV439843 AV439843 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD18f12_f 3', mRNA
sequence
Length = 585
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 148 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 207
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 208 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 267
Query: 320 aa 321
||
Sbjct: 268 aa 269
>gb|AV524500.1|AV524500 AV524500 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD04a10R 5', mRNA
sequence
Length = 506
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 169 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 228
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 229 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 288
Query: 320 aa 321
||
Sbjct: 289 aa 290
>gb|AV524938.2|AV524938 AV524938 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD13c03R 5', mRNA
sequence
Length = 523
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 152 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 211
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 212 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 271
Query: 320 aa 321
||
Sbjct: 272 aa 273
>gb|AV565496.1|AV565496 AV565496 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ225d03F 3', mRNA sequence
Length = 407
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 167 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 226
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 227 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 286
Query: 320 aa 321
||
Sbjct: 287 aa 288
>gb|BP796409.1|BP796409 BP796409 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-C19 5',
mRNA sequence
Length = 647
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 194 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 253
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 254 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 313
Query: 320 aa 321
||
Sbjct: 314 aa 315
>gb|BP841091.1|BP841091 BP841091 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-32-C23 5',
mRNA sequence
Length = 385
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 197 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 256
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 257 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 316
Query: 320 aa 321
||
Sbjct: 317 aa 318
>gb|BP844728.1|BP844728 BP844728 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-91-F11 5',
mRNA sequence
Length = 406
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 197 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 256
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 257 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 316
Query: 320 aa 321
||
Sbjct: 317 aa 318
>gb|BP858073.1|BP858073 BP858073 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-35-M01 5',
mRNA sequence
Length = 355
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 197 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 256
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 257 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 316
Query: 320 aa 321
||
Sbjct: 317 aa 318
>gb|BP860147.1|BP860147 BP860147 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-43-D14 5',
mRNA sequence
Length = 369
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 197 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 256
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 257 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 316
Query: 320 aa 321
||
Sbjct: 317 aa 318
>gb|BP868335.1|BP868335 BP868335 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-84-A10 5',
mRNA sequence
Length = 385
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 192 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 251
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 252 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 311
Query: 320 aa 321
||
Sbjct: 312 aa 313
>gb|AF360291.1| Arabidopsis thaliana putative expansin protein At-EXP1 (At1g69530)
mRNA, complete cds
Length = 1339
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 198 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 257
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 258 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 317
Query: 320 aa 321
||
Sbjct: 318 aa 319
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 816 ggctggtctttcggccagaccttca 840
>gb|AY051047.1| Arabidopsis thaliana putative expansin protein EXP1 (At1g69530)
mRNA, complete cds
Length = 784
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 91 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 150
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 151 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 210
Query: 320 aa 321
||
Sbjct: 211 aa 212
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 709 ggctggtctttcggccagaccttca 733
>emb|AX505396.1| Sequence 91 from Patent WO0216655
Length = 753
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 91 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 150
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 151 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 210
Query: 320 aa 321
||
Sbjct: 211 aa 212
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 709 ggctggtctttcggccagaccttca 733
>gb|AY089063.1| Arabidopsis thaliana clone 255048 mRNA, complete sequence
Length = 1366
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 289 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 348
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 349 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 408
Query: 320 aa 321
||
Sbjct: 409 aa 410
>emb|BX815073.1|CNS0ABGA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS30ZB03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1287
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 182 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 241
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 242 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 301
Query: 320 aa 321
||
Sbjct: 302 aa 303
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 800 ggctggtctttcggccagaccttca 824
>emb|BX815362.1|CNS0ABIP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS54ZG10 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1153
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 159 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 218
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 219 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 278
Query: 320 aa 321
||
Sbjct: 279 aa 280
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 777 ggctggtctttcggccagaccttca 801
>gb|U30476.1|ATU30476 Arabidopsis thaliana expansin At-EXPA1 (At-EXPA1) mRNA, partial cds
Length = 749
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 52 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 111
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 112 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 171
Query: 320 aa 321
||
Sbjct: 172 aa 173
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 670 ggctggtctttcggccagaccttca 694
>ref|NM_105622.2| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)
AT1G69530 (ATEXPA1) transcript variant AT1G69530.1 mRNA,
complete cds
Length = 1396
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 289 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 348
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 349 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 408
Query: 320 aa 321
||
Sbjct: 409 aa 410
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 907 ggctggtctttcggccagaccttca 931
>ref|NM_179537.1| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)
AT1G69530 (ATEXPA1) transcript variant AT1G69530.2 mRNA,
complete cds
Length = 1309
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 198 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 257
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 258 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 317
Query: 320 aa 321
||
Sbjct: 318 aa 319
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 816 ggctggtctttcggccagaccttca 840
>ref|NM_179538.1| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)
AT1G69530 (ATEXPA1) transcript variant AT1G69530.3 mRNA,
complete cds
Length = 1322
Score = 83.8 bits (42), Expect = 7e-014
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| || || ||||| |||||||| ||||| || || ||||| |||
Sbjct: 289 cacgccacattctacggtggtggtgatgcttccggcacaatgggaggtgcttgtggatac 348
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| || ||||| || || || ||||||||||||||||| |||||||| || |||
Sbjct: 349 ggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctattc 408
Query: 320 aa 321
||
Sbjct: 409 aa 410
Score = 42.1 bits (21), Expect = 0.24
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 830 ggctggtctttcggccagactttca 854
|||||||||||||||||||| ||||
Sbjct: 907 ggctggtctttcggccagaccttca 931
>gb|BE529402.1|BE529402 M74M20STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600038679R1 5', mRNA sequence
Length = 246
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 251 tgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacg 310
||||| ||||| ||||||||||| || || ||||| ||||||||||||||| |||||||
Sbjct: 62 tgtggctacgggaacctctacagtcaaggttacgggaccaacacggcggcgttgagcact 121
Query: 311 gcgctcttcaacaacggcctcagctgcgg 339
|| || ||||||||||| || ||||||||
Sbjct: 122 gctctgttcaacaacggtcttagctgcgg 150
>gb|AV824246.1|AV824246 AV824246 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-16-I08 5',
mRNA sequence
Length = 624
Score = 81.8 bits (41), Expect = 3e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| ||| | || || |||||||| |||||||| ||||||||||||
Sbjct: 160 cacgccactttctacggtggcagtgacgcctccggcacaatgggcggcgcgtgtgggtac 219
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||||| || ||||| |||||||||||| ||||||| || | |||
Sbjct: 220 gggaacttgtacagccaaggatacggtgtgaacacggcggcgttgagcactgctttgttc 279
Query: 320 aacaacggcctcagctg 336
|||||||| |||||||
Sbjct: 280 aacaacggattcagctg 296
>gb|AV826552.1|AV826552 AV826552 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-17-L22 5',
mRNA sequence
Length = 608
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 251 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 310
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 311 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 370
Query: 320 aacaa 324
|||||
Sbjct: 371 aacaa 375
>gb|CB258037.1|CB258037 74-E011082-014-003-D19-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771D193Q 5-PRIME, mRNA sequence
Length = 533
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 226 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 285
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 286 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 345
Query: 320 aacaa 324
|||||
Sbjct: 346 aacaa 350
>gb|BX840109.1|BX840109 BX840109 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH40ZF08 5PRIM,
mRNA sequence
Length = 975
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 230 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 289
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 290 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 349
Query: 320 aacaa 324
|||||
Sbjct: 350 aacaa 354
Score = 44.1 bits (22), Expect = 0.060
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagg 565
||||||||||| |||||||| |||||||||
Sbjct: 563 gccggcattgtccccgtctcataccgcagg 592
>gb|AV551490.1|AV551490 AV551490 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ127e02R 5', mRNA sequence
Length = 405
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 231 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 290
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 291 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 350
Query: 320 aacaa 324
|||||
Sbjct: 351 aacaa 355
>gb|CF774488.1|CF774488 AG_FSL_37G10 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 37G10, mRNA sequence
Length = 411
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 251 tgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacg 310
||||| ||||| ||||||||||| || || ||||| ||||||||||||||| |||||||
Sbjct: 271 tgtggctacgggaacctctacagtcaaggttacgggaccaacacggcggcgttgagcact 212
Query: 311 gcgctcttcaacaacggcctcagctgcgg 339
|| || ||||||||||| || ||||||||
Sbjct: 211 gctctgttcaacaacggtcttagctgcgg 183
>gb|CB253351.1|CB253351 03-E010742-019-001-F13-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768F131Q 5-PRIME, mRNA sequence
Length = 601
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 251 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 310
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 311 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 370
Query: 320 aacaa 324
|||||
Sbjct: 371 aacaa 375
>gb|CB254578.1|CB254578 65-E018437-019-009-A17-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A179Q 5-PRIME, mRNA sequence
Length = 691
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 239 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 298
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 299 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 358
Query: 320 aacaa 324
|||||
Sbjct: 359 aacaa 363
Score = 48.1 bits (24), Expect = 0.004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagggt 567
||||||||||| |||||||| |||||||||||
Sbjct: 572 gccggcattgtccccgtctcataccgcagggt 603
>gb|BP796889.1|BP796889 BP796889 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-01-D23 5',
mRNA sequence
Length = 382
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 249 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 308
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 309 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 368
Query: 320 aacaa 324
|||||
Sbjct: 369 aacaa 373
>gb|BP797885.1|BP797885 BP797885 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-05-D24 5',
mRNA sequence
Length = 384
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 249 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 308
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 309 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 368
Query: 320 aacaa 324
|||||
Sbjct: 369 aacaa 373
>gb|BP808794.1|BP808794 BP808794 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-19-D02 5',
mRNA sequence
Length = 390
Score = 81.8 bits (41), Expect = 3e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| ||| | || || |||||||| |||||||| ||||||||||||
Sbjct: 159 cacgccactttctacggtggcagtgacgcctccggcacaatgggcggcgcgtgtgggtac 218
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||||| || ||||| |||||||||||| ||||||| || | |||
Sbjct: 219 gggaacttgtacagccaaggatacggtgtgaacacggcggcgttgagcactgctttgttc 278
Query: 320 aacaacggcctcagctg 336
|||||||| |||||||
Sbjct: 279 aacaacggattcagctg 295
>gb|BP820825.1|BP820825 BP820825 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-55-N06 5',
mRNA sequence
Length = 384
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 252 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 311
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 312 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 371
Query: 320 aacaa 324
|||||
Sbjct: 372 aacaa 376
>gb|BP851619.1|BP851619 BP851619 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-A07 5',
mRNA sequence
Length = 393
Score = 81.8 bits (41), Expect = 3e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| ||| | || || |||||||| |||||||| ||||||||||||
Sbjct: 159 cacgccactttctacggtggcagtgacgcctccggcacaatgggcggcgcgtgtgggtac 218
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||||| || ||||| |||||||||||| ||||||| || | |||
Sbjct: 219 gggaacttgtacagccaaggatacggtgtgaacacggcggcgttgagcactgctttgttc 278
Query: 320 aacaacggcctcagctg 336
|||||||| |||||||
Sbjct: 279 aacaacggattcagctg 295
>gb|AF410277.1|AF410277 Arabidopsis thaliana At2g39700/F17A14.7 mRNA, complete cds
Length = 1306
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 253 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 312
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 313 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 372
Query: 320 aacaa 324
|||||
Sbjct: 373 aacaa 377
Score = 48.1 bits (24), Expect = 0.004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagggt 567
||||||||||| |||||||| |||||||||||
Sbjct: 586 gccggcattgtccccgtctcataccgcagggt 617
>gb|AY062683.1| Arabidopsis thaliana putative expansin (At2g39700; F17A14.7) mRNA,
complete cds
Length = 1318
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 250 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 309
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 310 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 369
Query: 320 aacaa 324
|||||
Sbjct: 370 aacaa 374
Score = 48.1 bits (24), Expect = 0.004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagggt 567
||||||||||| |||||||| |||||||||||
Sbjct: 583 gccggcattgtccccgtctcataccgcagggt 614
>gb|AY090368.1| Arabidopsis thaliana At2g37640/F13M22.14 mRNA, complete cds
Length = 1099
Score = 81.8 bits (41), Expect = 3e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| ||| | || || |||||||| |||||||| ||||||||||||
Sbjct: 159 cacgccactttctacggtggcagtgacgcctccggcacaatgggcggcgcgtgtgggtac 218
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||||| || ||||| |||||||||||| ||||||| || | |||
Sbjct: 219 gggaacttgtacagccaaggatacggtgtgaacacggcggcgttgagcactgctttgttc 278
Query: 320 aacaacggcctcagctg 336
|||||||| |||||||
Sbjct: 279 aacaacggattcagctg 295
Score = 42.1 bits (21), Expect = 0.24
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 539 ggcattgttcccgtctcctaccgcagggt 567
|||||||| ||||||||||| ||||||||
Sbjct: 495 ggcattgtccccgtctcctatcgcagggt 523
>gb|AY093338.1| Arabidopsis thaliana putative expansin (At2g39700) mRNA, complete
cds
Length = 871
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 103 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 162
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 163 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 222
Query: 320 aacaa 324
|||||
Sbjct: 223 aacaa 227
Score = 48.1 bits (24), Expect = 0.004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagggt 567
||||||||||| |||||||| |||||||||||
Sbjct: 436 gccggcattgtccccgtctcataccgcagggt 467
>gb|AY122898.1| Arabidopsis thaliana At2g37640/F13M22.14 mRNA, complete cds
Length = 789
Score = 81.8 bits (41), Expect = 3e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| ||| | || || |||||||| |||||||| ||||||||||||
Sbjct: 118 cacgccactttctacggtggcagtgacgcctccggcacaatgggcggcgcgtgtgggtac 177
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||||| || ||||| |||||||||||| ||||||| || | |||
Sbjct: 178 gggaacttgtacagccaaggatacggtgtgaacacggcggcgttgagcactgctttgttc 237
Query: 320 aacaacggcctcagctg 336
|||||||| |||||||
Sbjct: 238 aacaacggattcagctg 254
Score = 42.1 bits (21), Expect = 0.24
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 539 ggcattgttcccgtctcctaccgcagggt 567
|||||||| ||||||||||| ||||||||
Sbjct: 454 ggcattgtccccgtctcctatcgcagggt 482
>gb|AY072167.1| Arabidopsis thaliana putative expansin protein (At2g03090) mRNA,
complete cds
Length = 1384
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 251 tgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacg 310
||||| ||||| ||||||||||| || || ||||| ||||||||||||||| |||||||
Sbjct: 240 tgtggctacgggaacctctacagtcaaggttacgggaccaacacggcggcgttgagcact 299
Query: 311 gcgctcttcaacaacggcctcagctgcgg 339
|| || ||||||||||| || ||||||||
Sbjct: 300 gctctgttcaacaacggtcttagctgcgg 328
Score = 46.1 bits (23), Expect = 0.015
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 596 ttcaccatcaacggccactcctacttcaacctggtactggtgaccaa 642
||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 576 ttcacaatcaacggtcactcttacttcaaccttgtcttggtgaccaa 622
>gb|AY117342.1| Arabidopsis thaliana putative expansin protein (At2g03090) mRNA,
complete cds
Length = 793
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 251 tgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacg 310
||||| ||||| ||||||||||| || || ||||| ||||||||||||||| |||||||
Sbjct: 151 tgtggctacgggaacctctacagtcaaggttacgggaccaacacggcggcgttgagcact 210
Query: 311 gcgctcttcaacaacggcctcagctgcgg 339
|| || ||||||||||| || ||||||||
Sbjct: 211 gctctgttcaacaacggtcttagctgcgg 239
Score = 46.1 bits (23), Expect = 0.015
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 596 ttcaccatcaacggccactcctacttcaacctggtactggtgaccaa 642
||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 487 ttcacaatcaacggtcactcttacttcaaccttgtcttggtgaccaa 533
>emb|AX505394.1| Sequence 89 from Patent WO0216655
Length = 774
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 103 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 162
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 163 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 222
Query: 320 aacaa 324
|||||
Sbjct: 223 aacaa 227
Score = 48.1 bits (24), Expect = 0.004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcagggt 567
||||||||||| |||||||| |||||||||||
Sbjct: 436 gccggcattgtccccgtctcataccgcagggt 467
>emb|AX506374.1| Sequence 1069 from Patent WO0216655
Length = 747
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 251 tgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacg 310
||||| ||||| ||||||||||| || || ||||| ||||||||||||||| |||||||
Sbjct: 136 tgtggctacgggaacctctacagtcaaggttacgggaccaacacggcggcgttgagcact 195
Query: 311 gcgctcttcaacaacggcctcagctgcgg 339
|| || ||||||||||| || ||||||||
Sbjct: 196 gctctgttcaacaacggtcttagctgcgg 224
Score = 46.1 bits (23), Expect = 0.015
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 596 ttcaccatcaacggccactcctacttcaacctggtactggtgaccaa 642
||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 472 ttcacaatcaacggtcactcttacttcaaccttgtcttggtgaccaa 518
>emb|AX651740.1| Sequence 581 from Patent WO03000898
Length = 789
Score = 81.8 bits (41), Expect = 3e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| |||||||| ||| | || || |||||||| |||||||| ||||||||||||
Sbjct: 118 cacgccactttctacggtggcagtgacgcctccggcacaatgggcggcgcgtgtgggtac 177
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||||| || ||||| |||||||||||| ||||||| || | |||
Sbjct: 178 gggaacttgtacagccaaggatacggtgtgaacacggcggcgttgagcactgctttgttc 237
Query: 320 aacaacggcctcagctg 336
|||||||| |||||||
Sbjct: 238 aacaacggattcagctg 254
Score = 42.1 bits (21), Expect = 0.24
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 539 ggcattgttcccgtctcctaccgcagggt 567
|||||||| ||||||||||| ||||||||
Sbjct: 454 ggcattgtccccgtctcctatcgcagggt 482
>gb|AY085719.1| Arabidopsis thaliana clone 17353 mRNA, complete sequence
Length = 1319
Score = 81.8 bits (41), Expect = 3e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| || ||||| ||| |||| || |||||||| ||||| || || ||||| |||
Sbjct: 250 cacgccactttttacggtggcagcgacgcctccggcacaatgggaggagcttgtggttac 309
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||||| |||||||| |||||||| ||||||||||| || |||| |||||||| ||
Sbjct: 310 ggtaacctatacagccaagggtacgggaccaacacggctgctttgagtacggcgctgttt 369
Query: 320 aacaa 324
|||||
Sbjct: 370 aacaa 374
Score = 42.1 bits (21), Expect = 0.24
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 536 gccggcattgttcccgtctcctaccgcag 564
||||||||||| |||||||| ||||||||
Sbjct: 583 gccggcattgtccccgtctcataccgcag 611
>gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M13 map CIC11A04, complete
sequence
Length = 104016
Score = 81.8 bits (41), Expect = 3e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 251 tgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacg 310
||||| ||||| ||||||||||| || || ||||| ||||||||||||||| |||||||
Sbjct: 98445 tgtggctacgggaacctctacagtcaaggttacgggaccaacacggcggcgttgagcact 98386
Query: 311 gcgctcttcaacaacggcctcagctgcgg 339
|| || ||||||||||| || ||||||||
Sbjct: 98385 gctctgttcaacaacggtcttagctgcgg 98357
Score = 46.1 bits (23), Expect = 0.015
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 596 ttcaccatcaacggccactcctacttcaacctggtactggtgaccaa 642
||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 97874 ttcacaatcaacggtcactcttacttcaaccttgtcttggtgaccaa 97828
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 347,161
Number of Sequences: 1013581
Number of extensions: 347161
Number of successful extensions: 26467
Number of sequences better than 0.5: 164
Number of HSP's better than 0.5 without gapping: 155
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 24681
Number of HSP's gapped (non-prelim): 1770
length of query: 1294
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1274
effective length of database: 888,669,252
effective search space: 1132164627048
effective search space used: 1132164627048
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)