BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485944.3.1
(991 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BT002440.1| Arabidopsis thaliana Unknown protein (At1g72... 68 3e-009
gb|BT008840.1| Arabidopsis thaliana At1g72680 mRNA, complet... 68 3e-009
gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 B... 68 3e-009
emb|BX817762.1|CNS0AAPS Arabidopsis thaliana Full-length cD... 68 3e-009
emb|BX818561.1|CNS0ACJA Arabidopsis thaliana Full-length cD... 68 3e-009
emb|BX815074.1|CNS0ACWF Arabidopsis thaliana Full-length cD... 68 3e-009
emb|BX813469.1|CNS0ADTG Arabidopsis thaliana Full-length cD... 68 3e-009
gb|AY288079.1| Arabidopsis thaliana putative alcohol dehydr... 68 3e-009
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 68 3e-009
ref|NM_105927.3| Arabidopsis thaliana oxidoreductase/ oxido... 68 3e-009
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 68 3e-009
gb|Z46703.1|Z46703 ATTS4365 Perp-dry-seedA Arabidopsis thal... 62 2e-007
gb|BE038380.1|BE038380 AA12G02 AA Arabidopsis thaliana cDNA... 62 2e-007
gb|AV832246.1|AV832246 AV832246 RAFL11 Arabidopsis thaliana... 62 2e-007
emb|BX815899.1|CNS0AD9T Arabidopsis thaliana Full-length cD... 62 2e-007
gb|BE527735.1|BE527735 M69K20STM Arabidopsis developing see... 56 1e-005
gb|BE530209.1|BE530209 M76J15STM Arabidopsis developing see... 52 2e-004
gb|N96481.1|N96481 21044 CD4-14 Arabidopsis thaliana cDNA c... 44 0.046
gb|BE038841.1|BE038841 AB04H07 AB Arabidopsis thaliana cDNA... 44 0.046
gb|AV832095.1|AV832095 AV832095 RAFL11 Arabidopsis thaliana... 44 0.046
gb|CB074210.1|CB074210 EST02534 Early Ovule Development For... 44 0.046
gb|AV566451.1|AV566451 AV566451 Arabidopsis thaliana green ... 44 0.046
gb|CK118781.1|CK118781 216c05.p1 AtM1 Arabidopsis thaliana ... 44 0.046
gb|CK121258.1|CK121258 203o04.p1 AtM1 Arabidopsis thaliana ... 44 0.046
gb|CK121386.1|CK121386 203e22.p1 AtM1 Arabidopsis thaliana ... 44 0.046
gb|BP814212.1|BP814212 BP814212 RAFL19 Arabidopsis thaliana... 44 0.046
gb|L37884.1|ATHCAD1A Arabidopsis thaliana cinnamyl alcohol ... 44 0.046
gb|L37883.1|ATHCAD1B Arabidopsis thaliana cinnamyl alcohol ... 44 0.046
gb|AF370498.1|AF370498 Arabidopsis thaliana cinnamyl-alcoho... 44 0.046
gb|AY064669.1| Arabidopsis thaliana cinnamyl-alcohol dehydr... 44 0.046
emb|AX507233.1| Sequence 1928 from Patent WO0216655 44 0.046
gb|AY087363.1| Arabidopsis thaliana clone 34593 mRNA, compl... 44 0.046
emb|BX826344.1|CNS0A37S Arabidopsis thaliana Full-length cD... 44 0.046
gb|AY302076.1| Arabidopsis thaliana putative alcohol dehydr... 44 0.046
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 44 0.046
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 44 0.046
emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosom... 44 0.046
ref|NM_120093.2| Arabidopsis thaliana oxidoreductase/ zinc ... 44 0.046
ref|NM_001036735.1| Arabidopsis thaliana oxidoreductase/ zi... 44 0.046
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 44 0.046
>gb|BT002440.1| Arabidopsis thaliana Unknown protein (At1g72680) mRNA, complete cds
Length = 1282
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 590 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 649
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 650 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 709
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 710 tttggactta 719
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 293 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 352
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 353 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 399
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 449 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 508
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 509 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 552
>gb|BT008840.1| Arabidopsis thaliana At1g72680 mRNA, complete cds
Length = 1068
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 490 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 549
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 550 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 609
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 610 tttggactta 619
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 193 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 252
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 253 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 299
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 349 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 408
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 409 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 452
>gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F28P22 genomic sequence, complete
sequence
Length = 101105
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 50421 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 50480
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 50481 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 50540
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 50541 tttggactta 50550
Score = 48.1 bits (24), Expect = 0.003
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 50142 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 50201
Query: 759 tccactcacattgtagtccatgaaaggt 786
|| | ||||||||| || ||||||||||
Sbjct: 50202 tctagtcacattgttgttcatgaaaggt 50229
Score = 42.1 bits (21), Expect = 0.18
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 609 aaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 50052 aaagttggagaccatgttggtgttggaacgtatgttaactc 50092
>emb|BX817762.1|CNS0AAPS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL40ZA09 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1264
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 600 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 659
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 660 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 719
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 720 tttggactta 729
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 459 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 518
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 519 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 562
Score = 54.0 bits (27), Expect = 5e-005
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| | ||||| | |||| ||
Sbjct: 303 cctttggttcctgggcatgagattgctggaatagtgactaaagttgggcctaatgttcaa 362
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 363 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 409
>emb|BX818561.1|CNS0ACJA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL85ZG04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1208
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 538 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 597
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 598 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 657
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 658 tttggactta 667
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 397 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 456
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 457 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 500
Score = 54.0 bits (27), Expect = 5e-005
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
|||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 241 cctttggttcctgggcatgagaatgctggaatagtgactaaggttgggcctaatgttcaa 300
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 301 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 347
>emb|BX815074.1|CNS0ACWF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS30ZB06 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1241
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 573 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 632
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 633 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 692
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 693 tttggactta 702
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 276 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 335
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 336 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 382
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 432 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 491
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 492 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 535
>emb|BX813469.1|CNS0ADTG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB19ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1275
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 630 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 689
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 690 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 749
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 750 tttggactta 759
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 333 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 392
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 393 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 439
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 489 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 548
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 549 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 592
>gb|AY288079.1| Arabidopsis thaliana putative alcohol dehydrogenase mRNA, complete
cds
Length = 1068
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 490 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 549
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 550 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 609
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 610 tttggactta 619
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 193 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 252
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 253 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 299
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 349 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 408
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 409 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 452
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Minus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 11601418 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 11601359
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 11601358 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 11601299
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 11601298 tttggactta 11601289
Score = 48.1 bits (24), Expect = 0.003
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 11601697 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 11601638
Query: 759 tccactcacattgtagtccatgaaaggt 786
|| | ||||||||| || ||||||||||
Sbjct: 11601637 tctagtcacattgttgttcatgaaaggt 11601610
Score = 42.1 bits (21), Expect = 0.18
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 609 aaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 11601787 aaagttggagaccatgttggtgttggaacgtatgttaactc 11601747
>ref|NM_105927.3| Arabidopsis thaliana oxidoreductase/ oxidoreductase, acting on the
CH-OH group of donors, NAD or NADP as acceptor / zinc
ion binding AT1G72680 mRNA, complete cds
Length = 1322
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 630 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 689
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 690 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 749
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 750 tttggactta 759
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 333 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 392
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 393 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 439
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 489 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 548
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 549 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 592
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 67.9 bits (34), Expect = 3e-009
Identities = 106/130 (81%)
Strand = Plus / Minus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || || ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 27363758 tgtgctggaatcacggtttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 27363699
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| || ||
Sbjct: 27363698 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttggcaaggct 27363639
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 27363638 tttggactta 27363629
Score = 48.1 bits (24), Expect = 0.003
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 27364037 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 27363978
Query: 759 tccactcacattgtagtccatgaaaggt 786
|| | ||||||||| || ||||||||||
Sbjct: 27363977 tctagtcacattgttgttcatgaaaggt 27363950
Score = 42.1 bits (21), Expect = 0.18
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 609 aaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 27364127 aaagttggagaccatgttggtgttggaacgtatgttaactc 27364087
>gb|Z46703.1|Z46703 ATTS4365 Perp-dry-seedA Arabidopsis thaliana cDNA clone PAP790 5',
mRNA sequence
Length = 320
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 186 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 245
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 246 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 292
>gb|BE038380.1|BE038380 AA12G02 AA Arabidopsis thaliana cDNA 5' similar to cinnamyl-alcohol
dehydrogenase, mRNA sequence
Length = 719
Score = 61.9 bits (31), Expect = 2e-007
Identities = 106/130 (81%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 840 tgtgctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaag 899
||||||||||| || | ||| |||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 477 tgtgctggaatcacggnttatgctcctatgatgcgtcacaatatgaatcaacctggtaaa 536
Query: 900 tcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagca 959
|| |||||||| || || || |||||||| || |||||||| || || ||||| |||||
Sbjct: 537 tctcttggggtgatcgggctaggtggtcttggacacatggcggttaagtttgg-aaagct 595
Query: 960 tttggtctta 969
||||| ||||
Sbjct: 596 tttggactta 605
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 180 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 239
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 240 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 286
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 336 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 395
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 396 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 439
>gb|AV832246.1|AV832246 AV832246 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-07-D13 5',
mRNA sequence
Length = 605
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 294 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 353
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 354 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 400
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 450 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 509
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 510 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 553
>emb|BX815899.1|CNS0AD9T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH15ZG09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1268
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||||||||||||||||||||| |||||| | || ||| ||||||| | |||| ||
Sbjct: 302 cctttggttcctgggcatgagattgctggaatagtgactaaggttgggcctaatgttcaa 361
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
| || ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 362 cgattcaaagttggagaccatgttggtgttggaacgtatgttaactc 408
Score = 48.1 bits (24), Expect = 0.003
Identities = 84/104 (80%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| |||||||||||||||| || ||||| |||| || || || || |||
Sbjct: 458 aaaggagtttttactttcaatggcattaatcatgatggctctgttactaaaggaggctac 517
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 518 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 561
>gb|BE527735.1|BE527735 M69K20STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600036678R1 5', mRNA sequence
Length = 255
Score = 56.0 bits (28), Expect = 1e-005
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||||||||||||| ||||| |||| || || || || |||
Sbjct: 123 aaaggagtttttactttcaatggcattgatcatgatggctctgttactaaaggaggctac 182
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 183 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 226
Score = 42.1 bits (21), Expect = 0.18
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 609 aaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 32 aaagttggagaccatgttggtgttggaacgtatgttaactc 72
>gb|BE530209.1|BE530209 M76J15STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600039661R1 5', mRNA sequence
Length = 247
Score = 52.0 bits (26), Expect = 2e-004
Identities = 84/104 (80%)
Strand = Plus / Plus
Query: 699 aaagcagtttatactttcaatggcattgatacagatggaactgtcacaaaggggggttac 758
|||| ||||| ||||||||| ||||||||| ||||| |||| || || || || |||
Sbjct: 96 aaaggagtttttactttcaanggcattgatcatgatggctctgtnactaaaggaggctac 155
Query: 759 tccactcacattgtagtccatgaaaggtattgcttcaaaatacc 802
|| | ||||||||| || ||||||||||| |||| ||| |||||
Sbjct: 156 tctagtcacattgttgttcatgaaaggtactgctacaagatacc 199
Score = 42.1 bits (21), Expect = 0.18
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 609 aaagtgggtgaccatgtaggtgttggaacatatgtgaactc 649
||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 6 aaagttggagaccatgttggtgttggaacgtatgttaactc 46
>gb|N96481.1|N96481 21044 CD4-14 Arabidopsis thaliana cDNA clone F2C5T7, mRNA sequence
Length = 569
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 203 ctgtgtgctggaatcactgtgtatagtccaatga 236
>gb|BE038841.1|BE038841 AB04H07 AB Arabidopsis thaliana cDNA 5' similar to cinnamyl-alcohol
dehydrogenase cad1, mRNA sequence
Length = 714
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 535 ctgtgtgctggaatcactgtgtatagtccaatga 568
>gb|AV832095.1|AV832095 AV832095 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-02-K13 5',
mRNA sequence
Length = 618
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 540 ctgtgtgctggaatcactgtgtatagtccaatga 573
>gb|CB074210.1|CB074210 EST02534 Early Ovule Development Forward Subtracted Library
Arabidopsis thaliana cDNA clone 1D5C12 similar to
Cinnamyl alcohol dehydrogenase (CAD1), mRNA sequence
Length = 800
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 519 ctgtgtgctggaatcactgtgtatagtccaatga 552
>gb|AV566451.1|AV566451 AV566451 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ243g12F 3', mRNA sequence
Length = 618
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 519 ctgtgtgctggaatcactgtgtatagtccaatga 552
>gb|CK118781.1|CK118781 216c05.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C05216
5-PRIME, mRNA sequence
Length = 635
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 531 ctgtgtgctggaatcactgtgtatagtccaatga 564
>gb|CK121258.1|CK121258 203o04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O04203
5-PRIME, mRNA sequence
Length = 641
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 78 ctgtgtgctggaatcactgtgtatagtccaatga 111
>gb|CK121386.1|CK121386 203e22.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011E22203
5-PRIME, mRNA sequence
Length = 568
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 517 ctgtgtgctggaatcactgtgtatagtccaatga 550
>gb|BP814212.1|BP814212 BP814212 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-34-P11 5',
mRNA sequence
Length = 398
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 357 ctgtgtgctggaatcactgtgtatagtccaatga 390
>gb|L37884.1|ATHCAD1A Arabidopsis thaliana cinnamyl alcohol dehydrogenase (CAD1) mRNA,
cds 3' end
Length = 1339
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 483 ctgtgtgctggaatcactgtgtatagtccaatga 516
>gb|L37883.1|ATHCAD1B Arabidopsis thaliana cinnamyl alcohol dehydrogenase (CAD1) gene,
complete cds
Length = 1900
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 863 ctgtgtgctggaatcactgtgtatagtccaatga 896
>gb|AF370498.1|AF370498 Arabidopsis thaliana cinnamyl-alcohol dehydrogenase CAD1
(T22F8.230) mRNA, complete cds
Length = 1338
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 539 ctgtgtgctggaatcactgtgtatagtccaatga 572
>gb|AY064669.1| Arabidopsis thaliana cinnamyl-alcohol dehydrogenase CAD1
(At4g39330; T22F8.230) mRNA, complete cds
Length = 1126
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 493 ctgtgtgctggaatcactgtgtatagtccaatga 526
>emb|AX507233.1| Sequence 1928 from Patent WO0216655
Length = 1083
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 493 ctgtgtgctggaatcactgtgtatagtccaatga 526
>gb|AY087363.1| Arabidopsis thaliana clone 34593 mRNA, complete sequence
Length = 1358
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 541 ctgtgtgctggaatcactgtgtatagtccaatga 574
>emb|BX826344.1|CNS0A37S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB18ZC05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1320
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 519 ctgtgtgctggaatcactgtgtatagtccaatga 552
>gb|AY302076.1| Arabidopsis thaliana putative alcohol dehydrogenase (CAD9) mRNA,
complete cds
Length = 1083
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 493 ctgtgtgctggaatcactgtgtatagtccaatga 526
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 14204794 ctgtgtgctggaatcactgtgtatagtccaatga 14204827
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
Length = 89035
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 74692 ctgtgtgctggaatcactgtgtatagtccaatga 74725
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
Length = 198151
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 12169 ctgtgtgctggaatcactgtgtatagtccaatga 12202
>ref|NM_120093.2| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT4G39330
transcript variant AT4G39330.1 mRNA, complete cds
Length = 1433
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 541 ctgtgtgctggaatcactgtgtatagtccaatga 574
>ref|NM_001036735.1| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT4G39330
transcript variant AT4G39330.2 mRNA, complete cds
Length = 1334
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 543 ctgtgtgctggaatcactgtgtatagtccaatga 576
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 44.1 bits (22), Expect = 0.046
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 837 ctgtgtgctggaataaccgtgtatactccaatga 870
|||||||||||||| || ||||||| ||||||||
Sbjct: 18291994 ctgtgtgctggaatcactgtgtatagtccaatga 18292027
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 375,057
Number of Sequences: 1013581
Number of extensions: 375057
Number of successful extensions: 26654
Number of sequences better than 0.5: 40
Number of HSP's better than 0.5 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26019
Number of HSP's gapped (non-prelim): 623
length of query: 991
length of database: 908,940,872
effective HSP length: 20
effective length of query: 971
effective length of database: 888,669,252
effective search space: 862897843692
effective search space used: 862897843692
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)