BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455940.2.1
(1115 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV821843.1|AV821843 AV821843 RAFL4 Arabidopsis thaliana ... 66 1e-008
gb|AV829598.1|AV829598 AV829598 RAFL9 Arabidopsis thaliana ... 66 1e-008
gb|CF652642.1|CF652642 68-L020135-066-001-G17-SP6P MPIZ-ADI... 66 1e-008
gb|CF652643.1|CF652643 68-L020135w-066-001-G17-SP6P MPIZ-AD... 66 1e-008
gb|AV550365.1|AV550365 AV550365 Arabidopsis thaliana roots ... 66 1e-008
gb|AV550631.1|AV550631 AV550631 Arabidopsis thaliana roots ... 66 1e-008
gb|AV551773.1|AV551773 AV551773 Arabidopsis thaliana roots ... 66 1e-008
gb|CK119117.1|CK119117 214h16.p1 AtM1 Arabidopsis thaliana ... 66 1e-008
gb|CK121692.1|CK121692 202c15.p1 AtM1 Arabidopsis thaliana ... 66 1e-008
gb|AY057554.1| Arabidopsis thaliana AT4g34050/F28A23_190 mR... 66 1e-008
gb|AY062630.1| Arabidopsis thaliana Phosphoglycerate dehydr... 66 1e-008
gb|AY081457.1| Arabidopsis thaliana phosphoglycerate dehydr... 66 1e-008
gb|AY143979.1| Arabidopsis thaliana At4g34050/F28A23_190 mR... 66 1e-008
gb|AY088577.1| Arabidopsis thaliana clone 8049 mRNA, comple... 66 1e-008
emb|BX826590.1|CNS0A35S Arabidopsis thaliana Full-length cD... 66 1e-008
emb|BX828287.1|CNS0A315 Arabidopsis thaliana Full-length cD... 66 1e-008
emb|CQ804646.1| Sequence 1057 from Patent WO2004035798 66 1e-008
emb|CQ805684.1| Sequence 2095 from Patent WO2004035798 66 1e-008
ref|NM_119566.3| Arabidopsis thaliana O-methyltransferase/ ... 66 1e-008
gb|AV539060.1|AV539060 AV539060 Arabidopsis thaliana roots ... 64 6e-008
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 64 6e-008
emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome... 64 6e-008
emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosom... 64 6e-008
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 64 6e-008
gb|BE520306.1|BE520306 M11D2STM Arabidopsis developing seed... 60 9e-007
gb|BP810730.1|BP810730 BP810730 RAFL16 Arabidopsis thaliana... 60 9e-007
gb|BP811416.1|BP811416 BP811416 RAFL16 Arabidopsis thaliana... 60 9e-007
gb|AV782400.1|AV782400 AV782400 RAFL4 Arabidopsis thaliana ... 54 5e-005
gb|AV552264.1|AV552264 AV552264 Arabidopsis thaliana roots ... 52 2e-004
gb|BP840226.1|BP840226 BP840226 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP850522.1|BP850522 BP850522 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BP859494.1|BP859494 BP859494 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BP861319.1|BP861319 BP861319 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BU635690.1|BU635690 004G05 Infected Arabidopsis Leaf Ara... 50 8e-004
emb|AL751784.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.20
gb|AY201703.1|AY201703 AY201703 Arabidopsis thaliana Landsb... 42 0.20
gb|AY202163.1|AY202163 AY202163 Arabidopsis thaliana Landsb... 42 0.20
gb|T43879.1|T43879 7142 Lambda-PRL2 Arabidopsis thaliana cD... 42 0.20
gb|AV828097.1|AV828097 AV828097 RAFL9 Arabidopsis thaliana ... 42 0.20
gb|BP843352.1|BP843352 BP843352 RAFL21 Arabidopsis thaliana... 42 0.20
gb|AY080614.1| Arabidopsis thaliana unknown protein (At4g26... 42 0.20
gb|AY133755.1| Arabidopsis thaliana clone U18278 unknown pr... 42 0.20
gb|AC007658.2|AC007658 Arabidopsis thaliana chromosome II s... 42 0.20
emb|BX819512.1|CNS0A8ZI Arabidopsis thaliana Full-length cD... 42 0.20
emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome... 42 0.20
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 42 0.20
ref|NM_179124.1| Arabidopsis thaliana oxidoreductase AT4G26... 42 0.20
ref|NM_179996.2| Arabidopsis thaliana phosphoinositide phos... 42 0.20
ref|NM_001036651.1| Arabidopsis thaliana oxidoreductase AT4... 42 0.20
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 42 0.20
>gb|AV821843.1|AV821843 AV821843 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-C19 5',
mRNA sequence
Length = 688
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 508 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 449
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 448 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 389
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 388 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 329
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 328 gataagcatgtttaagaactg 308
>gb|AV829598.1|AV829598 AV829598 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-48-L18 5',
mRNA sequence
Length = 578
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 507 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 448
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 447 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 388
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 387 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 328
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 327 gataagcatgtttaagaactg 307
>gb|CF652642.1|CF652642 68-L020135-066-001-G17-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001G171Q 5-PRIME, mRNA sequence
Length = 567
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 496 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 437
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 436 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 377
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 376 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 317
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 316 gataagcatgtttaagaactg 296
>gb|CF652643.1|CF652643 68-L020135w-066-001-G17-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001G171Q 5-PRIME, mRNA sequence
Length = 924
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 496 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 437
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 436 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 377
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 376 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 317
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 316 gataagcatgtttaagaactg 296
>gb|AV550365.1|AV550365 AV550365 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ111d01R 5', mRNA sequence
Length = 553
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 483 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 424
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 423 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 364
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 363 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 304
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 303 gataagcatgtttaagaactg 283
>gb|AV550631.1|AV550631 AV550631 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ115b08R 5', mRNA sequence
Length = 544
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 473 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 414
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 413 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 354
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 353 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 294
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 293 gataagcatgtttaagaactg 273
>gb|AV551773.1|AV551773 AV551773 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ130e08R 5', mRNA sequence
Length = 559
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 487 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 428
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 427 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 368
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 367 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 308
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 307 gataagcatgtttaagaactg 287
>gb|CK119117.1|CK119117 214h16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011H16214
5-PRIME, mRNA sequence
Length = 789
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 494 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 435
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 434 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 375
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 374 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 315
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 314 gataagcatgtttaagaactg 294
>gb|CK121692.1|CK121692 202c15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C15202
5-PRIME, mRNA sequence
Length = 763
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 491 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 432
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 431 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 372
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 371 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 312
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 311 gataagcatgtttaagaactg 291
>gb|AY057554.1| Arabidopsis thaliana AT4g34050/F28A23_190 mRNA, complete cds
Length = 1026
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 506 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 447
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 446 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 387
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 386 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 327
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 326 gataagcatgtttaagaactg 306
>gb|AY062630.1| Arabidopsis thaliana Phosphoglycerate dehydrogenase - like protein
(At4g34050) mRNA, complete cds
Length = 999
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 508 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 449
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 448 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 389
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 388 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 329
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 328 gataagcatgtttaagaactg 308
>gb|AY081457.1| Arabidopsis thaliana phosphoglycerate dehydrogenase-like protein
(At4g34050) mRNA, complete cds
Length = 815
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 441 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 382
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 381 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 322
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 321 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 262
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 261 gataagcatgtttaagaactg 241
>gb|AY143979.1| Arabidopsis thaliana At4g34050/F28A23_190 mRNA, complete cds
Length = 780
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 441 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 382
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 381 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 322
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 321 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 262
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 261 gataagcatgtttaagaactg 241
>gb|AY088577.1| Arabidopsis thaliana clone 8049 mRNA, complete sequence
Length = 1033
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 510 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 451
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 450 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 391
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 390 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 331
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 330 gataagcatgtttaagaactg 310
>emb|BX826590.1|CNS0A35S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB44ZH02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1024
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 484 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 425
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 424 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 365
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 364 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 305
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 304 gataagcatgtttaagaactg 284
>emb|BX828287.1|CNS0A315 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH71ZC07 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1003
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 484 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 425
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 424 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 365
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 364 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 305
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 304 gataagcatgtttaagaactg 284
>emb|CQ804646.1| Sequence 1057 from Patent WO2004035798
Length = 780
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 441 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 382
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 381 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 322
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 321 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 262
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 261 gataagcatgtttaagaactg 241
>emb|CQ805684.1| Sequence 2095 from Patent WO2004035798
Length = 780
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 441 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 382
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 381 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 322
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 321 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 262
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 261 gataagcatgtttaagaactg 241
>ref|NM_119566.3| Arabidopsis thaliana O-methyltransferase/
S-adenosylmethionine-dependent methyltransferase
AT4G34050 transcript variant AT4G34050.1 mRNA, complete
cds
Length = 1091
Score = 65.9 bits (33), Expect = 1e-008
Identities = 159/201 (79%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 509 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 450
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggc 709
||| | ||||| ||||| |||| || ||||||| || ||||| || || || |||||
Sbjct: 449 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagcggtggc 390
Query: 710 gaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagctt 769
||| || |||||||| ||||| || ||||||||||| || ||||||||| | ||||||
Sbjct: 389 gagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagctt 330
Query: 770 gatgagcatgttcaggaactg 790
||| |||||||| | ||||||
Sbjct: 329 gataagcatgtttaagaactg 309
>gb|AV539060.1|AV539060 AV539060 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ126c06F 3', mRNA sequence
Length = 600
Score = 63.9 bits (32), Expect = 6e-008
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 679 tgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccga 738
||||||| || ||||| || || || |||||||| || |||||||| ||||| || ||||
Sbjct: 398 tgccgtcttcagggagagcaagagcggtggcgagaagagagtagccagtgtaaactccga 339
Query: 739 tctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactg 790
||||||| || ||||||||| | ||||||||| |||||||| | ||||||
Sbjct: 338 tctccattgtgttcttggcgttaacgagcttgataagcatgtttaagaactg 287
Score = 42.1 bits (21), Expect = 0.20
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctc 622
||||||||||||||| || |||||||| |||||
Sbjct: 487 gaagtcgatcttgtgagcaacgccggctttctc 455
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 63.9 bits (32), Expect = 6e-008
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 679 tgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccga 738
||||||| || ||||| || || || |||||||| || |||||||| ||||| || ||||
Sbjct: 12224065 tgccgtcttcagggagagcaagagcggtggcgagaagagagtagccagtgtaaactccga 12224006
Query: 739 tctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactg 790
||||||| || ||||||||| | ||||||||| |||||||| | ||||||
Sbjct: 12224005 tctccattgtgttcttggcgttaacgagcttgataagcatgtttaagaactg 12223954
Score = 42.1 bits (21), Expect = 0.20
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctc 622
||||||||||||||| || |||||||| |||||
Sbjct: 12224239 gaagtcgatcttgtgagcaacgccggctttctc 12224207
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 9453715 caagaaggaagaggaggagaa 9453735
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project)
Length = 94091
Score = 63.9 bits (32), Expect = 6e-008
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 679 tgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccga 738
||||||| || ||||| || || || |||||||| || |||||||| ||||| || ||||
Sbjct: 14787 tgccgtcttcagggagagcaagagcggtggcgagaagagagtagccagtgtaaactccga 14728
Query: 739 tctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactg 790
||||||| || ||||||||| | ||||||||| |||||||| | ||||||
Sbjct: 14727 tctccattgtgttcttggcgttaacgagcttgataagcatgtttaagaactg 14676
Score = 42.1 bits (21), Expect = 0.20
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctc 622
||||||||||||||| || |||||||| |||||
Sbjct: 14961 gaagtcgatcttgtgagcaacgccggctttctc 14929
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80
Length = 192861
Score = 63.9 bits (32), Expect = 6e-008
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 679 tgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccga 738
||||||| || ||||| || || || |||||||| || |||||||| ||||| || ||||
Sbjct: 144836 tgccgtcttcagggagagcaagagcggtggcgagaagagagtagccagtgtaaactccga 144777
Query: 739 tctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactg 790
||||||| || ||||||||| | ||||||||| |||||||| | ||||||
Sbjct: 144776 tctccattgtgttcttggcgttaacgagcttgataagcatgtttaagaactg 144725
Score = 42.1 bits (21), Expect = 0.20
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctc 622
||||||||||||||| || |||||||| |||||
Sbjct: 145010 gaagtcgatcttgtgagcaacgccggctttctc 144978
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 63.9 bits (32), Expect = 6e-008
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 679 tgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccga 738
||||||| || ||||| || || || |||||||| || |||||||| ||||| || ||||
Sbjct: 16311283 tgccgtcttcagggagagcaagagcggtggcgagaagagagtagccagtgtaaactccga 16311224
Query: 739 tctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactg 790
||||||| || ||||||||| | ||||||||| |||||||| | ||||||
Sbjct: 16311223 tctccattgtgttcttggcgttaacgagcttgataagcatgtttaagaactg 16311172
Score = 42.1 bits (21), Expect = 0.20
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctc 622
||||||||||||||| || |||||||| |||||
Sbjct: 16311457 gaagtcgatcttgtgagcaacgccggctttctc 16311425
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 13540947 caagaaggaagaggaggagaa 13540967
>gb|BE520306.1|BE520306 M11D2STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M11D2 5', mRNA sequence
Length = 308
Score = 60.0 bits (30), Expect = 9e-007
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 705 gtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatg 764
|||||||| || |||||||| ||||| || ||||||||||| || ||||||||| | |
Sbjct: 290 gtggcgagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacg 231
Query: 765 agcttgatgagcatgttcaggaactg 790
|||||||| |||||||| | ||||||
Sbjct: 230 agcttgataagcatgtttaagaactg 205
>gb|BP810730.1|BP810730 BP810730 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-27-E05 5',
mRNA sequence
Length = 408
Score = 60.0 bits (30), Expect = 9e-007
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 705 gtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatg 764
|||||||| || |||||||| ||||| || ||||||||||| || ||||||||| | |
Sbjct: 391 gtggcgagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacg 332
Query: 765 agcttgatgagcatgttcaggaactg 790
|||||||| |||||||| | ||||||
Sbjct: 331 agcttgataagcatgtttaagaactg 306
>gb|BP811416.1|BP811416 BP811416 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-30-J20 5',
mRNA sequence
Length = 403
Score = 60.0 bits (30), Expect = 9e-007
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 705 gtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatg 764
|||||||| || |||||||| ||||| || ||||||||||| || ||||||||| | |
Sbjct: 393 gtggcgagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacg 334
Query: 765 agcttgatgagcatgttcaggaactg 790
|||||||| |||||||| | ||||||
Sbjct: 333 agcttgataagcatgtttaagaactg 308
>gb|AV782400.1|AV782400 AV782400 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-C19 3',
mRNA sequence
Length = 681
Score = 54.0 bits (27), Expect = 5e-005
Identities = 151/191 (79%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagtt 649
||||||||||||||| || |||||||| ||||| ||| || | |||| ||||| ||
Sbjct: 491 gaagtcgatcttgtgagcaacgccggctttctcaatgatcggtaaacccaattcgtaatt 550
Query: 650 ctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgcc-gtgg 708
||| | ||||| ||||| |||| || ||||||| || ||||| || || ||| ||||
Sbjct: 551 ctctctgttgacatccatagccagaattttgccgtcttcagggagagcaagagccggtgg 610
Query: 709 cgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagct 768
|||| || |||||||| ||||| || ||||||||||| || ||||||||| | |||||
Sbjct: 611 cgagaagagagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagct 670
Query: 769 tgatgagcatg 779
|||| ||||||
Sbjct: 671 tgataagcatg 681
>gb|AV552264.1|AV552264 AV552264 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ25d06R 5', mRNA sequence
Length = 281
Score = 52.0 bits (26), Expect = 2e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 717 gagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatgagc 776
|||||||| ||||| || ||||||||||| || ||||||||| | ||||||||| |||
Sbjct: 274 gagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagcttgataagc 215
Query: 777 atgttcaggaactg 790
||||| | ||||||
Sbjct: 214 atgtttaagaactg 201
>gb|BP840226.1|BP840226 BP840226 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-29-I21 5',
mRNA sequence
Length = 388
Score = 52.0 bits (26), Expect = 2e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 717 gagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatgagc 776
|||||||| ||||| || ||||||||||| || ||||||||| | ||||||||| |||
Sbjct: 381 gagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagcttgataagc 322
Query: 777 atgttcaggaactg 790
||||| | ||||||
Sbjct: 321 atgtttaagaactg 308
>gb|BP850522.1|BP850522 BP850522 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-13-C19 5',
mRNA sequence
Length = 384
Score = 52.0 bits (26), Expect = 2e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 717 gagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatgagc 776
|||||||| ||||| || ||||||||||| || ||||||||| | ||||||||| |||
Sbjct: 378 gagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagcttgataagc 319
Query: 777 atgttcaggaactg 790
||||| | ||||||
Sbjct: 318 atgtttaagaactg 305
>gb|BP859494.1|BP859494 BP859494 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-40-N23 5',
mRNA sequence
Length = 398
Score = 52.0 bits (26), Expect = 2e-004
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 705 gtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcg 758
|||||||| || |||||||| ||||| || ||||||||||| || |||||||||
Sbjct: 393 gtggcgagaagagagtagccagtgtaaactccgatctccattgtgttcttggcg 340
>gb|BP861319.1|BP861319 BP861319 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-47-D22 5',
mRNA sequence
Length = 386
Score = 52.0 bits (26), Expect = 2e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 717 gagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatgagc 776
|||||||| ||||| || ||||||||||| || ||||||||| | ||||||||| |||
Sbjct: 381 gagtagccagtgtaaactccgatctccattgtgttcttggcgttaacgagcttgataagc 322
Query: 777 atgttcaggaactg 790
||||| | ||||||
Sbjct: 321 atgtttaagaactg 308
>gb|BU635690.1|BU635690 004G05 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 748
Score = 50.1 bits (25), Expect = 8e-004
Identities = 124/157 (78%)
Strand = Plus / Minus
Query: 679 tgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccga 738
||||||| || ||||| || || || |||||||| || |||||||| ||||| || ||||
Sbjct: 334 tgccgtcttcagggagagcaagagcggtggcgagaagagagtagccagtgtaaactccga 275
Query: 739 tctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgt 798
||||||| || |||| |||| | | ||||||| |||||||| | |||||| || || |
Sbjct: 274 tctccattgtgttctcggcgttaacgtgcttgataagcatgtttaagaactgtccttcat 215
Query: 799 cggcggaggtcgtcatcaggttccatgggtgcttggc 835
| || || || ||||| | ||||||||| || |||||
Sbjct: 214 cagctgatgtggtcattatgttccatggatgtttggc 178
>emb|AL751784.1| Arabidopsis thaliana T-DNA flanking sequence GK-007F02-014809,
genomic survey sequence
Length = 386
Score = 42.1 bits (21), Expect = 0.20
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctc 622
||||||||||||||| || |||||||| |||||
Sbjct: 179 gaagtcgatcttgtgagcaacgccggctttctc 211
>gb|AY201703.1|AY201703 AY201703 Arabidopsis thaliana Landsberg DNA Arabidopsis thaliana
genomic clone GT4996.Ds3.07.13.99.b.367, DNA sequence
Length = 367
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 206 cgccgtcggtggcggtggtgg 226
|||||||||||||||||||||
Sbjct: 236 cgccgtcggtggcggtggtgg 216
>gb|AY202163.1|AY202163 AY202163 Arabidopsis thaliana Landsberg DNA Arabidopsis thaliana
genomic clone GT6221.Ds3.07.13.99.b.370, DNA sequence
Length = 370
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 206 cgccgtcggtggcggtggtgg 226
|||||||||||||||||||||
Sbjct: 216 cgccgtcggtggcggtggtgg 196
>gb|T43879.1|T43879 7142 Lambda-PRL2 Arabidopsis thaliana cDNA clone 118N13T7, mRNA
sequence
Length = 390
Score = 42.1 bits (21), Expect = 0.20
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 590 gaagtcgatcttgtgggcgacgccggccttctc 622
||||||||||||||| || |||||||| |||||
Sbjct: 40 gaagtcgatcttgtgagcaacgccggctttctc 8
>gb|AV828097.1|AV828097 AV828097 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-23-M17 5',
mRNA sequence
Length = 614
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 354 caagaaggaagaggaggagaa 374
>gb|BP843352.1|BP843352 BP843352 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-57-N11 5',
mRNA sequence
Length = 384
Score = 42.1 bits (21), Expect = 0.20
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 717 gagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatgagc 776
|||||||| || || || ||||||||||| || ||||||||| | ||||||||| |||
Sbjct: 380 gagtagccagtctaaactccgatctccattgtgttcttggcgttaacgagcttgataagc 321
Query: 777 atgtt 781
|||||
Sbjct: 320 atgtt 316
>gb|AY080614.1| Arabidopsis thaliana unknown protein (At4g26965) mRNA, complete cds
Length = 1001
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 353 caagaaggaagaggaggagaa 373
>gb|AY133755.1| Arabidopsis thaliana clone U18278 unknown protein (At4g26965) mRNA,
complete cds
Length = 586
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 279 caagaaggaagaggaggagaa 299
>gb|AC007658.2|AC007658 Arabidopsis thaliana chromosome II section 216 of 255 of the complete
sequence. Sequence from clones F27I1
Length = 12237
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 206 cgccgtcggtggcggtggtgg 226
|||||||||||||||||||||
Sbjct: 11736 cgccgtcggtggcggtggtgg 11756
>emb|BX819512.1|CNS0A8ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB85ZE11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2136
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 206 cgccgtcggtggcggtggtgg 226
|||||||||||||||||||||
Sbjct: 209 cgccgtcggtggcggtggtgg 229
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project)
Length = 128574
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 88953 caagaaggaagaggaggagaa 88973
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66
Length = 198372
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 44796 caagaaggaagaggaggagaa 44816
>ref|NM_179124.1| Arabidopsis thaliana oxidoreductase AT4G26965 transcript variant
AT4G26965.1 mRNA, complete cds
Length = 986
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 354 caagaaggaagaggaggagaa 374
>ref|NM_179996.2| Arabidopsis thaliana phosphoinositide phospholipase C/
phospholipase C AT2G40116 mRNA, complete cds
Length = 2134
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 206 cgccgtcggtggcggtggtgg 226
|||||||||||||||||||||
Sbjct: 209 cgccgtcggtggcggtggtgg 229
>ref|NM_001036651.1| Arabidopsis thaliana oxidoreductase AT4G26965 transcript variant
AT4G26965.2 mRNA, complete cds
Length = 1000
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 caagaaggaagaggaggagaa 110
|||||||||||||||||||||
Sbjct: 383 caagaaggaagaggaggagaa 403
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 42.1 bits (21), Expect = 0.20
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 206 cgccgtcggtggcggtggtgg 226
|||||||||||||||||||||
Sbjct: 16759000 cgccgtcggtggcggtggtgg 16759020
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 351,282
Number of Sequences: 1013581
Number of extensions: 351282
Number of successful extensions: 30441
Number of sequences better than 0.5: 50
Number of HSP's better than 0.5 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29756
Number of HSP's gapped (non-prelim): 685
length of query: 1115
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1095
effective length of database: 888,669,252
effective search space: 973092830940
effective search space used: 973092830940
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)