BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440570.2.2
(905 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW004212.1|AW004212 701549078 A. thaliana, Columbia Col-... 111 2e-022
gb|AV782778.1|AV782778 AV782778 RAFL5 Arabidopsis thaliana ... 111 2e-022
gb|AV822119.1|AV822119 AV822119 RAFL5 Arabidopsis thaliana ... 111 2e-022
gb|CA781829.1|CA781829 051E12AF Infected Arabidopsis Leaf A... 111 2e-022
gb|AV538046.1|AV538046 AV538046 Arabidopsis thaliana roots ... 111 2e-022
gb|AV543075.1|AV543075 AV543075 Arabidopsis thaliana roots ... 111 2e-022
gb|BP586227.1|BP586227 BP586227 RAFL15 Arabidopsis thaliana... 111 2e-022
gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribos... 111 2e-022
gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA... 111 2e-022
gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA... 111 2e-022
emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cD... 111 2e-022
ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROT... 111 2e-022
gb|CB185942.1|CB185942 EST01133 Arabidopsis virulent Pseudo... 105 1e-020
emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cD... 103 5e-020
gb|CB264110.1|CB264110 91-E014993-035-003-E23-T7R MPIZ-ADIS... 101 2e-019
gb|BP582516.1|BP582516 BP582516 RAFL14 Arabidopsis thaliana... 100 8e-019
gb|BP643928.1|BP643928 BP643928 RAFL19 Arabidopsis thaliana... 100 8e-019
gb|CF652057.1|CF652057 31-L020362-066-002-N08-SP6P MPIZ-ADI... 96 1e-017
emb|BX822675.1|CNS0A7MK Arabidopsis thaliana Full-length cD... 96 1e-017
gb|BP779131.1|BP779131 BP779131 RAFL7 Arabidopsis thaliana ... 94 5e-017
gb|CC886702.1|CC886702 SALK_148920.56.00.x Arabidopsis thal... 90 8e-016
gb|T04593.1|T04593 640 Lambda-PRL2 Arabidopsis thaliana cDN... 90 8e-016
gb|AV785594.1|AV785594 AV785594 RAFL6 Arabidopsis thaliana ... 90 8e-016
gb|AV789045.1|AV789045 AV789045 RAFL6 Arabidopsis thaliana ... 90 8e-016
gb|AV792990.1|AV792990 AV792990 RAFL7 Arabidopsis thaliana ... 90 8e-016
gb|AV798876.1|AV798876 AV798876 RAFL9 Arabidopsis thaliana ... 90 8e-016
gb|AV811194.1|AV811194 AV811194 RAFL9 Arabidopsis thaliana ... 90 8e-016
gb|AV812697.1|AV812697 AV812697 RAFL9 Arabidopsis thaliana ... 90 8e-016
gb|BP586950.1|BP586950 BP586950 RAFL15 Arabidopsis thaliana... 90 8e-016
gb|BP587066.1|BP587066 BP587066 RAFL15 Arabidopsis thaliana... 90 8e-016
gb|BP595871.1|BP595871 BP595871 RAFL15 Arabidopsis thaliana... 90 8e-016
gb|BP596379.1|BP596379 BP596379 RAFL15 Arabidopsis thaliana... 90 8e-016
gb|BP604569.1|BP604569 BP604569 RAFL16 Arabidopsis thaliana... 90 8e-016
gb|BP618021.1|BP618021 BP618021 RAFL16 Arabidopsis thaliana... 90 8e-016
gb|BP629322.1|BP629322 BP629322 RAFL17 Arabidopsis thaliana... 90 8e-016
gb|BP630836.1|BP630836 BP630836 RAFL17 Arabidopsis thaliana... 90 8e-016
gb|BP631221.1|BP631221 BP631221 RAFL17 Arabidopsis thaliana... 90 8e-016
gb|BP643383.1|BP643383 BP643383 RAFL19 Arabidopsis thaliana... 90 8e-016
gb|BP783315.1|BP783315 BP783315 RAFL7 Arabidopsis thaliana ... 90 8e-016
gb|BP795490.1|BP795490 BP795490 RAFL7 Arabidopsis thaliana ... 90 8e-016
gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome II... 90 8e-016
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 90 8e-016
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 90 8e-016
gb|BE038821.1|BE038821 AB07C09 AB Arabidopsis thaliana cDNA... 88 3e-015
gb|AV825327.1|AV825327 AV825327 RAFL7 Arabidopsis thaliana ... 88 3e-015
gb|AV827922.1|AV827922 AV827922 RAFL9 Arabidopsis thaliana ... 88 3e-015
gb|CF652156.1|CF652156 37-L020525-066-003-J09-SP6P MPIZ-ADI... 88 3e-015
gb|AV552035.1|AV552035 AV552035 Arabidopsis thaliana roots ... 88 3e-015
gb|BP813190.1|BP813190 BP813190 RAFL19 Arabidopsis thaliana... 88 3e-015
gb|BP813743.1|BP813743 BP813743 RAFL19 Arabidopsis thaliana... 88 3e-015
gb|BP822627.1|BP822627 BP822627 RAFL19 Arabidopsis thaliana... 88 3e-015
gb|BP854674.1|BP854674 BP854674 RAFL21 Arabidopsis thaliana... 88 3e-015
gb|BP857535.1|BP857535 BP857535 RAFL21 Arabidopsis thaliana... 88 3e-015
gb|BP860180.1|BP860180 BP860180 RAFL21 Arabidopsis thaliana... 88 3e-015
gb|BP868224.1|BP868224 BP868224 RAFL21 Arabidopsis thaliana... 88 3e-015
gb|AY056141.1| Arabidopsis thaliana putative 60S ribosomal ... 88 3e-015
gb|AY122996.1| Arabidopsis thaliana putative 60S ribosomal ... 88 3e-015
gb|BT000711.1| Arabidopsis thaliana clone RAFL09-17-C05 (R0... 88 3e-015
ref|NM_122667.2| Arabidopsis thaliana structural constituen... 88 3e-015
gb|T21082.1|T21082 3090 Lambda-PRL2 Arabidopsis thaliana cD... 86 1e-014
gb|T88582.1|T88582 12278 Lambda-PRL2 Arabidopsis thaliana c... 86 1e-014
emb|AL084264.1|CNS00PAI Arabidopsis thaliana genome survey ... 82 2e-013
gb|CL492521.1|CL492521 SAIL_567_G05.v1 SAIL Collection Arab... 82 2e-013
gb|AV552450.1|AV552450 AV552450 Arabidopsis thaliana roots ... 82 2e-013
gb|BP577125.1|BP577125 BP577125 RAFL14 Arabidopsis thaliana... 82 2e-013
gb|BP583670.1|BP583670 BP583670 RAFL14 Arabidopsis thaliana... 82 2e-013
gb|BP594504.1|BP594504 BP594504 RAFL15 Arabidopsis thaliana... 82 2e-013
gb|BP630794.1|BP630794 BP630794 RAFL17 Arabidopsis thaliana... 82 2e-013
gb|BP636075.1|BP636075 BP636075 RAFL18 Arabidopsis thaliana... 82 2e-013
gb|AA597851.1|AA597851 29918 Lambda-PRL2 Arabidopsis thalia... 80 8e-013
gb|BP626619.1|BP626619 BP626619 RAFL17 Arabidopsis thaliana... 80 8e-013
gb|CB254873.1|CB254873 57-E018361-019-007-A16-T7R MPIZ-ADIS... 80 8e-013
gb|BP798204.1|BP798204 BP798204 RAFL14 Arabidopsis thaliana... 80 8e-013
gb|BP800537.1|BP800537 BP800537 RAFL14 Arabidopsis thaliana... 80 8e-013
gb|BP814189.1|BP814189 BP814189 RAFL19 Arabidopsis thaliana... 80 8e-013
gb|BP819869.1|BP819869 BP819869 RAFL19 Arabidopsis thaliana... 80 8e-013
gb|BP820622.1|BP820622 BP820622 RAFL19 Arabidopsis thaliana... 80 8e-013
gb|BP835680.1|BP835680 BP835680 RAFL19 Arabidopsis thaliana... 80 8e-013
gb|BP843276.1|BP843276 BP843276 RAFL21 Arabidopsis thaliana... 80 8e-013
gb|BP844305.1|BP844305 BP844305 RAFL21 Arabidopsis thaliana... 80 8e-013
gb|BP853538.1|BP853538 BP853538 RAFL21 Arabidopsis thaliana... 80 8e-013
gb|BP854760.1|BP854760 BP854760 RAFL21 Arabidopsis thaliana... 80 8e-013
gb|BP864195.1|BP864195 BP864195 RAFL21 Arabidopsis thaliana... 80 8e-013
gb|BP868924.1|BP868924 BP868924 RAFL21 Arabidopsis thaliana... 80 8e-013
ref|NM_130325.1| Arabidopsis thaliana structural constituen... 78 3e-012
gb|BP569056.1|BP569056 BP569056 RAFL14 Arabidopsis thaliana... 76 1e-011
gb|BP602398.1|BP602398 BP602398 RAFL16 Arabidopsis thaliana... 76 1e-011
gb|BP809195.1|BP809195 BP809195 RAFL16 Arabidopsis thaliana... 76 1e-011
gb|BP817272.1|BP817272 BP817272 RAFL19 Arabidopsis thaliana... 76 1e-011
gb|BP819871.1|BP819871 BP819871 RAFL19 Arabidopsis thaliana... 76 1e-011
gb|BP859852.1|BP859852 BP859852 RAFL21 Arabidopsis thaliana... 76 1e-011
gb|BP601934.1|BP601934 BP601934 RAFL16 Arabidopsis thaliana... 74 5e-011
gb|BP633404.1|BP633404 BP633404 RAFL17 Arabidopsis thaliana... 74 5e-011
gb|BP649946.1|BP649946 BP649946 RAFL19 Arabidopsis thaliana... 74 5e-011
gb|BP663630.1|BP663630 BP663630 RAFL21 Arabidopsis thaliana... 74 5e-011
gb|BP796897.1|BP796897 BP796897 RAFL14 Arabidopsis thaliana... 74 5e-011
gb|BP799006.1|BP799006 BP799006 RAFL14 Arabidopsis thaliana... 74 5e-011
gb|BP829227.1|BP829227 BP829227 RAFL19 Arabidopsis thaliana... 74 5e-011
gb|BP851600.1|BP851600 BP851600 RAFL21 Arabidopsis thaliana... 74 5e-011
gb|BP861583.1|BP861583 BP861583 RAFL21 Arabidopsis thaliana... 74 5e-011
gb|BP574755.1|BP574755 BP574755 RAFL14 Arabidopsis thaliana... 72 2e-010
gb|BP638690.1|BP638690 BP638690 RAFL19 Arabidopsis thaliana... 72 2e-010
gb|BP801399.1|BP801399 BP801399 RAFL14 Arabidopsis thaliana... 72 2e-010
gb|BP823019.1|BP823019 BP823019 RAFL19 Arabidopsis thaliana... 72 2e-010
gb|BP830636.1|BP830636 BP830636 RAFL19 Arabidopsis thaliana... 72 2e-010
gb|BP835483.1|BP835483 BP835483 RAFL19 Arabidopsis thaliana... 72 2e-010
gb|BP842649.1|BP842649 BP842649 RAFL21 Arabidopsis thaliana... 72 2e-010
gb|BP868414.1|BP868414 BP868414 RAFL21 Arabidopsis thaliana... 72 2e-010
gb|N97136.1|N97136 22315 Lambda-PRL2 Arabidopsis thaliana c... 68 3e-009
gb|T13864.1|T13864 2029 Lambda-PRL2 Arabidopsis thaliana cD... 68 3e-009
gb|BP590033.1|BP590033 BP590033 RAFL15 Arabidopsis thaliana... 68 3e-009
gb|BP652046.1|BP652046 BP652046 RAFL19 Arabidopsis thaliana... 68 3e-009
gb|BP827616.1|BP827616 BP827616 RAFL19 Arabidopsis thaliana... 68 3e-009
gb|BP591647.1|BP591647 BP591647 RAFL15 Arabidopsis thaliana... 66 1e-008
gb|BP663095.1|BP663095 BP663095 RAFL21 Arabidopsis thaliana... 66 1e-008
gb|BP803264.1|BP803264 BP803264 RAFL14 Arabidopsis thaliana... 66 1e-008
gb|BP803757.1|BP803757 BP803757 RAFL14 Arabidopsis thaliana... 66 1e-008
gb|BP831474.1|BP831474 BP831474 RAFL19 Arabidopsis thaliana... 66 1e-008
gb|AV799915.1|AV799915 AV799915 RAFL9 Arabidopsis thaliana ... 64 4e-008
gb|AV535094.1|AV535094 AV535094 Arabidopsis thaliana flower... 64 4e-008
gb|AV542782.1|AV542782 AV542782 Arabidopsis thaliana roots ... 64 4e-008
gb|BP565250.1|BP565250 BP565250 RAFL14 Arabidopsis thaliana... 64 4e-008
gb|BP569107.1|BP569107 BP569107 RAFL14 Arabidopsis thaliana... 64 4e-008
gb|BP569257.1|BP569257 BP569257 RAFL14 Arabidopsis thaliana... 64 4e-008
gb|BP595302.1|BP595302 BP595302 RAFL15 Arabidopsis thaliana... 64 4e-008
gb|BP630918.1|BP630918 BP630918 RAFL17 Arabidopsis thaliana... 64 4e-008
gb|BP801000.1|BP801000 BP801000 RAFL14 Arabidopsis thaliana... 64 4e-008
gb|BP801137.1|BP801137 BP801137 RAFL14 Arabidopsis thaliana... 64 4e-008
gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from... 64 4e-008
emb|BX832577.1|CNS0A1WZ Arabidopsis thaliana Full-length cD... 64 4e-008
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 64 4e-008
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 64 4e-008
gb|BP601988.1|BP601988 BP601988 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP641460.1|BP641460 BP641460 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|BP804604.1|BP804604 BP804604 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP812235.1|BP812235 BP812235 RAFL19 Arabidopsis thaliana... 62 2e-007
gb|CW846933.1|CW846933 GT13815.Ds5.01.29.2004.jx50.577 Arab... 60 7e-007
gb|CW846934.1|CW846934 GT13816.Ds5.01.29.2004.jx50.782 Arab... 60 7e-007
gb|AV557800.1|AV557800 AV557800 Arabidopsis thaliana green ... 60 7e-007
gb|BP851981.1|BP851981 BP851981 RAFL21 Arabidopsis thaliana... 60 7e-007
gb|AA389792.1|AA389792 OS107 NaCl-treated Arabidopsis subtr... 58 3e-006
gb|AV550190.1|AV550190 AV550190 Arabidopsis thaliana roots ... 58 3e-006
gb|AV559994.1|AV559994 AV559994 Arabidopsis thaliana green ... 58 3e-006
gb|BP582042.1|BP582042 BP582042 RAFL14 Arabidopsis thaliana... 58 3e-006
gb|BP644111.1|BP644111 BP644111 RAFL19 Arabidopsis thaliana... 58 3e-006
gb|BP656927.1|BP656927 BP656927 RAFL19 Arabidopsis thaliana... 58 3e-006
gb|BP658152.1|BP658152 BP658152 RAFL19 Arabidopsis thaliana... 58 3e-006
gb|BP796589.1|BP796589 BP796589 RAFL5 Arabidopsis thaliana ... 58 3e-006
gb|BP798427.1|BP798427 BP798427 RAFL14 Arabidopsis thaliana... 58 3e-006
gb|BP802107.1|BP802107 BP802107 RAFL14 Arabidopsis thaliana... 58 3e-006
gb|BP802761.1|BP802761 BP802761 RAFL14 Arabidopsis thaliana... 58 3e-006
gb|BP803026.1|BP803026 BP803026 RAFL14 Arabidopsis thaliana... 58 3e-006
gb|BP809097.1|BP809097 BP809097 RAFL16 Arabidopsis thaliana... 58 3e-006
gb|BP812879.1|BP812879 BP812879 RAFL19 Arabidopsis thaliana... 58 3e-006
gb|BP813557.1|BP813557 BP813557 RAFL19 Arabidopsis thaliana... 58 3e-006
gb|BP817978.1|BP817978 BP817978 RAFL19 Arabidopsis thaliana... 58 3e-006
gb|BP844795.1|BP844795 BP844795 RAFL21 Arabidopsis thaliana... 58 3e-006
gb|BP845763.1|BP845763 BP845763 RAFL21 Arabidopsis thaliana... 58 3e-006
gb|BP846681.1|BP846681 BP846681 RAFL21 Arabidopsis thaliana... 58 3e-006
gb|BP848292.1|BP848292 BP848292 RAFL21 Arabidopsis thaliana... 58 3e-006
gb|BP851830.1|BP851830 BP851830 RAFL21 Arabidopsis thaliana... 58 3e-006
gb|BP855236.1|BP855236 BP855236 RAFL21 Arabidopsis thaliana... 58 3e-006
gb|BP858433.1|BP858433 BP858433 RAFL21 Arabidopsis thaliana... 58 3e-006
gb|BP862150.1|BP862150 BP862150 RAFL21 Arabidopsis thaliana... 58 3e-006
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 58 3e-006
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 58 3e-006
gb|Z17549.1|Z17549 ATTS0123 AC16H Arabidopsis thaliana cDNA... 56 1e-005
gb|AW004263.1|AW004263 701669857 A. thaliana, Columbia Col-... 56 1e-005
gb|BP813523.1|BP813523 BP813523 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP826828.1|BP826828 BP826828 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP830020.1|BP830020 BP830020 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BZ381580.1|BZ381580 SALK_116957.51.75.x Arabidopsis thal... 54 4e-005
gb|CC888027.1|CC888027 SALK_151173.46.20.x Arabidopsis thal... 54 4e-005
emb|BX533607.1| Arabidopsis thaliana T-DNA flanking sequenc... 54 4e-005
gb|CF773255.1|CF773255 AG_FSL_14G11 Arabidopsis ag-1 35S:AG... 54 4e-005
gb|BP801663.1|BP801663 BP801663 RAFL14 Arabidopsis thaliana... 54 4e-005
gb|BP821222.1|BP821222 BP821222 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP839970.1|BP839970 BP839970 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP855610.1|BP855610 BP855610 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|BP856964.1|BP856964 BP856964 RAFL21 Arabidopsis thaliana... 54 4e-005
dbj|AK221052.1| Arabidopsis thaliana mRNA for hypothetical ... 54 4e-005
gb|CF653073.1|CF653073 94-L020167-066-001-L24-SP6P MPIZ-ADI... 52 2e-004
gb|BP568525.1|BP568525 BP568525 RAFL14 Arabidopsis thaliana... 52 2e-004
gb|BP827779.1|BP827779 BP827779 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|B24608.1|B24608 F21A19TF IGF Arabidopsis thaliana genomi... 50 7e-004
gb|BP570153.1|BP570153 BP570153 RAFL14 Arabidopsis thaliana... 50 7e-004
gb|BP570489.1|BP570489 BP570489 RAFL14 Arabidopsis thaliana... 50 7e-004
gb|BP581119.1|BP581119 BP581119 RAFL14 Arabidopsis thaliana... 50 7e-004
gb|BP589707.1|BP589707 BP589707 RAFL15 Arabidopsis thaliana... 50 7e-004
gb|BP644476.1|BP644476 BP644476 RAFL19 Arabidopsis thaliana... 50 7e-004
gb|BP816293.1|BP816293 BP816293 RAFL19 Arabidopsis thaliana... 50 7e-004
gb|BP816617.1|BP816617 BP816617 RAFL19 Arabidopsis thaliana... 50 7e-004
gb|BP826238.1|BP826238 BP826238 RAFL19 Arabidopsis thaliana... 50 7e-004
gb|BP867531.1|BP867531 BP867531 RAFL21 Arabidopsis thaliana... 50 7e-004
gb|BP576513.1|BP576513 BP576513 RAFL14 Arabidopsis thaliana... 48 0.003
gb|BP801190.1|BP801190 BP801190 RAFL14 Arabidopsis thaliana... 48 0.003
gb|BP815153.1|BP815153 BP815153 RAFL19 Arabidopsis thaliana... 48 0.003
gb|BP816223.1|BP816223 BP816223 RAFL19 Arabidopsis thaliana... 48 0.003
gb|BP822697.1|BP822697 BP822697 RAFL19 Arabidopsis thaliana... 48 0.003
gb|BP825445.1|BP825445 BP825445 RAFL19 Arabidopsis thaliana... 48 0.003
gb|BP839479.1|BP839479 BP839479 RAFL19 Arabidopsis thaliana... 48 0.003
gb|BP852019.1|BP852019 BP852019 RAFL21 Arabidopsis thaliana... 48 0.003
emb|BX531257.1| Arabidopsis thaliana T-DNA flanking sequenc... 46 0.011
emb|BX531258.1| Arabidopsis thaliana T-DNA flanking sequenc... 46 0.011
gb|BP815320.1|BP815320 BP815320 RAFL19 Arabidopsis thaliana... 46 0.011
gb|BP825082.1|BP825082 BP825082 RAFL19 Arabidopsis thaliana... 46 0.011
gb|BP842212.1|BP842212 BP842212 RAFL21 Arabidopsis thaliana... 46 0.011
gb|BP846504.1|BP846504 BP846504 RAFL21 Arabidopsis thaliana... 46 0.011
gb|AV789092.1|AV789092 AV789092 RAFL6 Arabidopsis thaliana ... 44 0.042
gb|AV798678.1|AV798678 AV798678 RAFL9 Arabidopsis thaliana ... 44 0.042
gb|AV815515.1|AV815515 AV815515 RAFL9 Arabidopsis thaliana ... 44 0.042
gb|BP563291.1|BP563291 BP563291 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP567003.1|BP567003 BP567003 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP571926.1|BP571926 BP571926 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP573170.1|BP573170 BP573170 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP574142.1|BP574142 BP574142 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP574543.1|BP574543 BP574543 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP578804.1|BP578804 BP578804 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP581456.1|BP581456 BP581456 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP582622.1|BP582622 BP582622 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP583356.1|BP583356 BP583356 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP584798.1|BP584798 BP584798 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP588244.1|BP588244 BP588244 RAFL15 Arabidopsis thaliana... 44 0.042
gb|BP589410.1|BP589410 BP589410 RAFL15 Arabidopsis thaliana... 44 0.042
gb|BP593635.1|BP593635 BP593635 RAFL15 Arabidopsis thaliana... 44 0.042
gb|BP603650.1|BP603650 BP603650 RAFL16 Arabidopsis thaliana... 44 0.042
gb|BP611180.1|BP611180 BP611180 RAFL16 Arabidopsis thaliana... 44 0.042
gb|BP629963.1|BP629963 BP629963 RAFL17 Arabidopsis thaliana... 44 0.042
gb|BP630665.1|BP630665 BP630665 RAFL17 Arabidopsis thaliana... 44 0.042
gb|BP634722.1|BP634722 BP634722 RAFL17 Arabidopsis thaliana... 44 0.042
gb|BP641898.1|BP641898 BP641898 RAFL19 Arabidopsis thaliana... 44 0.042
gb|BP644058.1|BP644058 BP644058 RAFL19 Arabidopsis thaliana... 44 0.042
gb|BP656658.1|BP656658 BP656658 RAFL19 Arabidopsis thaliana... 44 0.042
gb|BP657518.1|BP657518 BP657518 RAFL19 Arabidopsis thaliana... 44 0.042
gb|BP659553.1|BP659553 BP659553 RAFL19 Arabidopsis thaliana... 44 0.042
gb|BP665657.1|BP665657 BP665657 RAFL21 Arabidopsis thaliana... 44 0.042
gb|BP668226.1|BP668226 BP668226 RAFL21 Arabidopsis thaliana... 44 0.042
gb|BP792479.1|BP792479 BP792479 RAFL7 Arabidopsis thaliana ... 44 0.042
gb|BP794339.1|BP794339 BP794339 RAFL7 Arabidopsis thaliana ... 44 0.042
gb|BP794410.1|BP794410 BP794410 RAFL7 Arabidopsis thaliana ... 44 0.042
gb|BP797186.1|BP797186 BP797186 RAFL14 Arabidopsis thaliana... 44 0.042
gb|BP848813.1|BP848813 BP848813 RAFL21 Arabidopsis thaliana... 44 0.042
gb|BP860503.1|BP860503 BP860503 RAFL21 Arabidopsis thaliana... 44 0.042
gb|B62040.1|B62040 T20B24TF TAMU Arabidopsis thaliana genom... 42 0.16
emb|AL092830.1|CNS00VWG Arabidopsis thaliana genome survey ... 42 0.16
emb|AL092909.1|CNS00VYN Arabidopsis thaliana genome survey ... 42 0.16
gb|BZ289063.1|BZ289063 SALK_022460.18.45.x Arabidopsis thal... 42 0.16
gb|CC055870.1|CC055870 SALK_097816.50.20.x Arabidopsis thal... 42 0.16
gb|BP572722.1|BP572722 BP572722 RAFL14 Arabidopsis thaliana... 42 0.16
gb|BP573575.1|BP573575 BP573575 RAFL14 Arabidopsis thaliana... 42 0.16
gb|BP590170.1|BP590170 BP590170 RAFL15 Arabidopsis thaliana... 42 0.16
gb|BP639086.1|BP639086 BP639086 RAFL19 Arabidopsis thaliana... 42 0.16
gb|BP641877.1|BP641877 BP641877 RAFL19 Arabidopsis thaliana... 42 0.16
>gb|AW004212.1|AW004212 701549078 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549078, mRNA sequence
Length = 578
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Minus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 442 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 383
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 382 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 323
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 322 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 263
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 262 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 203
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 202 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 159
>gb|AV782778.1|AV782778 AV782778 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-01-F21 3',
mRNA sequence
Length = 687
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Minus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 483 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 424
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 423 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 364
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 363 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 304
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 303 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 244
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 243 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 200
>gb|AV822119.1|AV822119 AV822119 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-01-F21 5',
mRNA sequence
Length = 660
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 313 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 372
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 373 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 432
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 433 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 492
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 493 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 552
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 553 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 596
Score = 58.0 bits (29), Expect = 3e-006
Identities = 131/165 (79%)
Strand = Plus / Plus
Query: 85 aatgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaa 144
||||||||| || || ||||||| || | || |||||||||||| | || || || ||
Sbjct: 32 aatgggtattgatctgatcgccggaggtaagagtaagaagaccaaaaggacagctccaaa 91
Query: 145 gtctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggac 204
|||||| ||||||||||||||||| |||||||| ||||| || |||| ||||| ||
Sbjct: 92 gtctgatgatgtctacctcaagcttactgtcaagctttaccggtttctggtaaggagaac 151
Query: 205 caagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| | ||| || | |||||||||||||||||
Sbjct: 152 taatagcaagttcaatggtgtgatattgaagaggcttttcatgag 196
>gb|CA781829.1|CA781829 051E12AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 725
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 275 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 334
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 335 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 394
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 395 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 454
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 455 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 514
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 515 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 558
Score = 56.0 bits (28), Expect = 1e-005
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||||||| | || || || |||||||| ||||||||||||||||| |||||
Sbjct: 27 taagaagaccaaaaggacagctccaaagtctgatgatgtctacctcaagcttactgtcaa 86
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||| || |||| ||||| || || ||||| ||||| | ||| || | |||||
Sbjct: 87 gctttaccggtttctggtaaggagaactaatagcaagttcaatggtgtgatattgaagag 146
Query: 238 gcttttcatgag 249
||||||||||||
Sbjct: 147 gcttttcatgag 158
>gb|AV538046.1|AV538046 AV538046 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109e04F 3', mRNA sequence
Length = 560
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Minus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 523 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 464
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 463 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 404
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 403 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 344
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 343 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 284
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 283 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 240
>gb|AV543075.1|AV543075 AV543075 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ196h10F 3', mRNA sequence
Length = 449
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Minus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 418 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 359
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 358 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 299
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 298 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 239
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 238 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 179
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 178 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 135
>gb|BP586227.1|BP586227 BP586227 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-05-H23 3',
mRNA sequence
Length = 460
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Minus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 413 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 354
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 353 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 294
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 293 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 234
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 233 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 174
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 173 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 130
>gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribosomal protein L18 mRNA,
complete cds
Length = 778
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 307 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 366
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 367 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 426
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 427 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 486
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 487 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 546
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 547 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 590
Score = 58.0 bits (29), Expect = 3e-006
Identities = 131/165 (79%)
Strand = Plus / Plus
Query: 85 aatgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaa 144
||||||||| || || ||||||| || | || |||||||||||| | || || || ||
Sbjct: 26 aatgggtattgatctgatcgccggaggtaagagtaagaagaccaaaaggacagctccaaa 85
Query: 145 gtctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggac 204
|||||| ||||||||||||||||| |||||||| ||||| || |||| ||||| ||
Sbjct: 86 gtctgatgatgtctacctcaagcttactgtcaagctttaccggtttctggtaaggagaac 145
Query: 205 caagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| | ||| || | |||||||||||||||||
Sbjct: 146 taatagcaagttcaatggtgtgatattgaagaggcttttcatgag 190
>gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds
Length = 794
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 312 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 371
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 372 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 431
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 432 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 491
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 492 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 551
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 552 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 595
Score = 58.0 bits (29), Expect = 3e-006
Identities = 131/165 (79%)
Strand = Plus / Plus
Query: 85 aatgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaa 144
||||||||| || || ||||||| || | || |||||||||||| | || || || ||
Sbjct: 31 aatgggtattgatctgatcgccggaggtaagagtaagaagaccaaaaggacagctccaaa 90
Query: 145 gtctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggac 204
|||||| ||||||||||||||||| |||||||| ||||| || |||| ||||| ||
Sbjct: 91 gtctgatgatgtctacctcaagcttactgtcaagctttaccggtttctggtaaggagaac 150
Query: 205 caagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| | ||| || | |||||||||||||||||
Sbjct: 151 taatagcaagttcaatggtgtgatattgaagaggcttttcatgag 195
>gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds
Length = 564
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 281 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 340
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 341 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 400
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 401 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 460
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 461 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 520
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 521 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 564
Score = 56.0 bits (28), Expect = 1e-005
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||||||| | || || || |||||||| ||||||||||||||||| |||||
Sbjct: 33 taagaagaccaaaaggacagctccaaagtctgatgatgtctacctcaagcttactgtcaa 92
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||| || |||| ||||| || || ||||| ||||| | ||| || | |||||
Sbjct: 93 gctttaccggtttctggtaaggagaactaatagcaagttcaatggtgtgatattgaagag 152
Query: 238 gcttttcatgag 249
||||||||||||
Sbjct: 153 gcttttcatgag 164
>emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB67ZC09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 714
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 303 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 362
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 363 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 422
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 423 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 482
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 483 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 542
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 543 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 586
Score = 58.0 bits (29), Expect = 3e-006
Identities = 131/165 (79%)
Strand = Plus / Plus
Query: 85 aatgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaa 144
||||||||| || || ||||||| || | || |||||||||||| | || || || ||
Sbjct: 22 aatgggtattgatctgatcgccggaggtaagagtaagaagaccaaaaggacagctccaaa 81
Query: 145 gtctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggac 204
|||||| ||||||||||||||||| |||||||| ||||| || |||| ||||| ||
Sbjct: 82 gtctgatgatgtctacctcaagcttactgtcaagctttaccggtttctggtaaggagaac 141
Query: 205 caagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| | ||| || | |||||||||||||||||
Sbjct: 142 taatagcaagttcaatggtgtgatattgaagaggcttttcatgag 186
>ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROTEIN L18); structural
constituent of ribosome AT3G05590 (RPL18) mRNA, complete
cds
Length = 834
Score = 111 bits (56), Expect = 2e-022
Identities = 227/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 312 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 371
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 372 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 431
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 432 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 491
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 492 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 551
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 552 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 595
Score = 58.0 bits (29), Expect = 3e-006
Identities = 131/165 (79%)
Strand = Plus / Plus
Query: 85 aatgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaa 144
||||||||| || || ||||||| || | || |||||||||||| | || || || ||
Sbjct: 31 aatgggtattgatctgatcgccggaggtaagagtaagaagaccaaaaggacagctccaaa 90
Query: 145 gtctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggac 204
|||||| ||||||||||||||||| |||||||| ||||| || |||| ||||| ||
Sbjct: 91 gtctgatgatgtctacctcaagcttactgtcaagctttaccggtttctggtaaggagaac 150
Query: 205 caagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| | ||| || | |||||||||||||||||
Sbjct: 151 taatagcaagttcaatggtgtgatattgaagaggcttttcatgag 195
>gb|CB185942.1|CB185942 EST01133 Arabidopsis virulent Pseudomonas syringae subtracted
library Arabidopsis thaliana cDNA clone DC8-G7 similar
to putative 60S ribosomal protein L18, mRNA sequence
Length = 602
Score = 105 bits (53), Expect = 1e-020
Identities = 228/285 (80%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 318 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 377
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||||||||| | |||||| | ||| |||
Sbjct: 378 aagctggaggtgaatgcttaacctttgaccagcttgctctcagagctccattgggccaga 437
Query: 486 acacggtcct-cttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaag 544
| ||||| || | | || || || |||||| | ||||| ||||||| ||| || ||
Sbjct: 438 atacggttctnccttagaggacctaagaattcacgtgaagcagtgaagcatttcggacct 497
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 498 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 557
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 558 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 602
>emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB9ZC10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 575
Score = 103 bits (52), Expect = 5e-020
Identities = 226/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 61 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 120
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 121 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 180
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||| | ||| || || |
Sbjct: 181 acacggttcttcttagaggacctaagaattcacgtgaagcagttaagcatttcggacctg 240
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 241 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 300
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 301 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 344
>gb|CB264110.1|CB264110 91-E014993-035-003-E23-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000E233Q 5-PRIME, mRNA sequence
Length = 705
Score = 101 bits (51), Expect = 2e-019
Identities = 225/283 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 293 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 352
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 353 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 412
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 413 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 472
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||
Sbjct: 473 ctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcg 532
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggttta 648
||||||| | || | |||||| || |||||||||| ||||||
Sbjct: 533 agaaggccagaggaaagaggaagagtcgtggattcagggttta 575
Score = 58.0 bits (29), Expect = 3e-006
Identities = 131/165 (79%)
Strand = Plus / Plus
Query: 85 aatgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaa 144
||||||||| || || ||||||| || | || |||||||||||| | || || || ||
Sbjct: 12 aatgggtattgatctgatcgccggaggtaagagtaagaagaccaaaaggacagctccaaa 71
Query: 145 gtctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggac 204
|||||| ||||||||||||||||| |||||||| ||||| || |||| ||||| ||
Sbjct: 72 gtctgatgatgtctacctcaagcttactgtcaagctttaccggtttctggtaaggagaac 131
Query: 205 caagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| | ||| || | |||||||||||||||||
Sbjct: 132 taatagcaagttcaatggtgtgatattgaagaggcttttcatgag 176
>gb|BP582516.1|BP582516 BP582516 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-J04 3',
mRNA sequence
Length = 450
Score = 99.6 bits (50), Expect = 8e-019
Identities = 212/266 (79%)
Strand = Plus / Minus
Query: 384 ctgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcc 443
||||| |||||||||| |||| ||||||||| | |||| || ||||| || || |||
Sbjct: 450 ctgccttgaggttcacagagagagcaagggctcgcattgagaaagctggaggtgaatgct 391
Query: 444 tcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggg 503
| || ||||||||||| ||||| | |||||| | ||| |||||||||| || | || |
Sbjct: 390 taacctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagag 331
Query: 504 gccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcaca 563
| || |||||| | ||||| ||||||| ||| || || |||||||| ||||| ||||
Sbjct: 330 gacctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacaca 271
Query: 564 gccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagga 623
| ||| ||||||| ||||| || ||||||||||||||||||||||||| | || | ||
Sbjct: 270 gtcactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaaga 211
Query: 624 ggaacagccgtggattcaaggtttaa 649
|||| || ||||||||||||||||||
Sbjct: 210 ggaagagtcgtggattcaaggtttaa 185
>gb|BP643928.1|BP643928 BP643928 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-63-K11 3',
mRNA sequence
Length = 418
Score = 99.6 bits (50), Expect = 8e-019
Identities = 216/270 (80%), Gaps = 1/270 (0%)
Strand = Plus / Minus
Query: 380 gttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgag 439
||||||||| |||||||||| |||| ||||||||| | |||| || ||||| || ||
Sbjct: 417 gttactgccttgaggttcacagagagagcaagggctcgcattgaaaa-gctggaggtgaa 359
Query: 440 tgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttg 499
||| | || ||||||||||| ||||| | |||||| | ||| |||||||||| || |
Sbjct: 358 tgcttaacctttgaccagctcgctctcagagctccattgggccagaacacggttcttctt 299
Query: 500 aggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccg 559
|| || || |||||| | ||||| ||||||| ||| || || |||||||| |||||
Sbjct: 298 agaggacctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgcca 239
Query: 560 cacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggc 619
||||| ||| ||||||| ||||| || ||||||||||||||||||||||||| | ||
Sbjct: 238 cacagtcactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagagga 179
Query: 620 aggaggaacagccgtggattcaaggtttaa 649
| |||||| || ||||||||||||||||||
Sbjct: 178 aagaggaagagtcgtggattcaaggtttaa 149
>gb|CF652057.1|CF652057 31-L020362-066-002-N08-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001N082Q 5-PRIME, mRNA sequence
Length = 777
Score = 95.6 bits (48), Expect = 1e-017
Identities = 111/132 (84%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||||||| | ||||| || ||||| || ||||||||||| ||||| ||||||||
Sbjct: 25 taagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaa 84
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||| || ||||| ||||| | || ||||| ||||| ||||| ||||| |||||
Sbjct: 85 gctttaccggtttttggtgaggagatctaacagcaacttcaatgctgtgattctgaagag 144
Query: 238 gcttttcatgag 249
||||||||||||
Sbjct: 145 gcttttcatgag 156
Score = 63.9 bits (32), Expect = 4e-008
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 374 atgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggt 433
||||||||||||||| ||||||| || |||| || ||||| || |||| || ||||||
Sbjct: 281 atgaaggttactgccttgaggtttactgagagggctagggctagaattgagaaagctggt 340
Query: 434 ggcgagtgcctcacatttgaccagcttgctct 465
|| |||||| | || |||||||||||||||||
Sbjct: 341 ggagagtgcttaacctttgaccagcttgctct 372
>emb|BX822675.1|CNS0A7MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB57ZH02 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 722
Score = 95.6 bits (48), Expect = 1e-017
Identities = 225/284 (79%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 279 ttccagccatgaaagtaactgccttgaggttcacagagagagcaagggctcgcattgaga 338
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 339 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 398
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||| || | || || || |||||| | ||||| ||||||| ||| || || |
Sbjct: 399 acacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctg 458
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||| |||| || ||||||| ||||| || ||||||||||||||||||
Sbjct: 459 ctcctggtgtgccatacagtaactccaagccatatgttcgggccaagggaaggaagttcg 518
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 519 agaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 562
Score = 56.0 bits (28), Expect = 1e-005
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||||||| | || || || |||||||| ||||||||||||||||| |||||
Sbjct: 31 taagaagaccaaaaggacagctccaaagtctgatgatgtctacctcaagcttactgtcaa 90
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||| || |||| ||||| || || ||||| ||||| | ||| || | |||||
Sbjct: 91 gctttaccggtttctggtaaggagaactaatagcaagttcaatggtgtgatattgaagag 150
Query: 238 gcttttcatgag 249
||||||||||||
Sbjct: 151 gcttttcatgag 162
>gb|BP779131.1|BP779131 BP779131 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-66-M18 3',
mRNA sequence
Length = 413
Score = 93.7 bits (47), Expect = 5e-017
Identities = 215/271 (79%)
Strand = Plus / Minus
Query: 374 atgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggt 433
||||| || |||||| |||||||||| |||| ||||||||| | |||| || |||||
Sbjct: 411 atgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgagaaagctgga 352
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
|| || ||| | || ||||||||||| ||||| | |||||| | ||| ||||||||||
Sbjct: 351 ggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccagaacacggtt 292
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| | || || || |||||| | ||||| ||||||| ||| || || ||||||||
Sbjct: 291 cttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggt 232
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
||||| ||||| ||| ||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 231 gtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttcgagaaggcc 172
Query: 614 cgtggcaggaggaacagccgtggattcaagg 644
| || | |||||| || |||||||||||||
Sbjct: 171 agaggaaagaggaagagtcgtggattcaagg 141
>gb|CC886702.1|CC886702 SALK_148920.56.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_148920.56.00.x,
DNA sequence
Length = 146
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 113 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 54
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 53 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 9
>gb|T04593.1|T04593 640 Lambda-PRL2 Arabidopsis thaliana cDNA clone 42H8T7, mRNA
sequence
Length = 360
Score = 89.7 bits (45), Expect = 8e-016
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
||||| |||||| | ||||| || ||||| || ||||||||||| ||||| ||||||||
Sbjct: 23 taagangaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaa 82
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||| || ||||| ||||| | || ||||| ||||| ||||| ||||| |||||
Sbjct: 83 gctttaccggtttttggtgaggagatctaacagcaacttcaatgctgtgattctgaagag 142
Query: 238 gcttttcatgag 249
||||||||||||
Sbjct: 143 gcttttcatgag 154
>gb|AV785594.1|AV785594 AV785594 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-67-H22 3',
mRNA sequence
Length = 427
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 279 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 220
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 219 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 175
>gb|AV789045.1|AV789045 AV789045 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-81-P20 3',
mRNA sequence
Length = 411
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 293 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 234
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 233 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 189
>gb|AV792990.1|AV792990 AV792990 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-17-K01 3',
mRNA sequence
Length = 431
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 328 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 269
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 268 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 224
>gb|AV798876.1|AV798876 AV798876 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-17-N16 3',
mRNA sequence
Length = 429
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 279 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 220
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 219 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 175
>gb|AV811194.1|AV811194 AV811194 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-67-D04 3',
mRNA sequence
Length = 415
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 288 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 229
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 228 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 184
>gb|AV812697.1|AV812697 AV812697 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-74-P20 3',
mRNA sequence
Length = 389
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 285 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 226
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 225 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 181
>gb|BP586950.1|BP586950 BP586950 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-08-D20 3',
mRNA sequence
Length = 414
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 304 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 245
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 244 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 200
>gb|BP587066.1|BP587066 BP587066 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-41-A17 3',
mRNA sequence
Length = 435
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 286 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 227
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 226 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 182
>gb|BP595871.1|BP595871 BP595871 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-31-N02 3',
mRNA sequence
Length = 450
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 286 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 227
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 226 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 182
>gb|BP596379.1|BP596379 BP596379 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-34-G04 3',
mRNA sequence
Length = 441
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 304 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 245
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 244 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 200
>gb|BP604569.1|BP604569 BP604569 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-63-B20 3',
mRNA sequence
Length = 324
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 239 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 180
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 179 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 135
>gb|BP618021.1|BP618021 BP618021 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-26-I19 3',
mRNA sequence
Length = 428
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 305 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 246
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 245 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 201
>gb|BP629322.1|BP629322 BP629322 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-15-M22 3',
mRNA sequence
Length = 366
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 265 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 206
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 205 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 161
>gb|BP630836.1|BP630836 BP630836 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-21-I07 3',
mRNA sequence
Length = 366
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 297 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 238
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 237 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 193
>gb|BP631221.1|BP631221 BP631221 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-22-M18 3',
mRNA sequence
Length = 374
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 257 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 198
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 197 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 153
>gb|BP643383.1|BP643383 BP643383 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-61-M08 3',
mRNA sequence
Length = 457
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 304 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 245
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 244 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 200
>gb|BP783315.1|BP783315 BP783315 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-85-L04 3',
mRNA sequence
Length = 405
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 304 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 245
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 244 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 200
>gb|BP795490.1|BP795490 BP795490 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-65-C05 3',
mRNA sequence
Length = 404
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 304 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 245
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 244 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 200
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence,
complete sequence
Length = 100887
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 84462 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 84403
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 84402 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 84358
Score = 54.0 bits (27), Expect = 4e-005
Identities = 102/127 (80%)
Strand = Plus / Minus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 84731 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 84672
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 84671 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 84612
Query: 486 acacggt 492
|||||||
Sbjct: 84611 acacggt 84605
Score = 46.1 bits (23), Expect = 0.011
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagct 168
|||||||||||| | || || || |||||||| |||||||||||||||||
Sbjct: 85312 taagaagaccaaaaggacagctccaaagtctgatgatgtctacctcaagct 85262
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 1686686 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 1686627
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 1686626 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 1686582
Score = 54.0 bits (27), Expect = 4e-005
Identities = 102/127 (80%)
Strand = Plus / Minus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 1686955 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 1686896
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 1686895 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 1686836
Query: 486 acacggt 492
|||||||
Sbjct: 1686835 acacggt 1686829
Score = 46.1 bits (23), Expect = 0.011
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagct 168
|||||||||||| | || || || |||||||| |||||||||||||||||
Sbjct: 1687536 taagaagaccaaaaggacagctccaaagtctgatgatgtctacctcaagct 1687486
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 89.7 bits (45), Expect = 8e-016
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 545 gctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttc 604
|||||||| ||||| ||||| ||| ||||||| ||||| || |||||||||||||||||
Sbjct: 1622677 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 1622736
Query: 605 gagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| | || | |||||| || ||||||||||||||||||
Sbjct: 1622737 gagaaggccagaggaaagaggaagagtcgtggattcaaggtttaa 1622781
Score = 54.0 bits (27), Expect = 4e-005
Identities = 102/127 (80%)
Strand = Plus / Plus
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
||||||| ||||| || |||||| |||||||||| |||| ||||||||| | |||| |
Sbjct: 1622408 ttccagccatgaaagtgactgccttgaggttcacagagagagcaagggctcgcattgaga 1622467
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
| ||||| || || ||| | || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 1622468 aagctggaggtgaatgcttaacctttgaccagctcgctctcagagctccattgggccaga 1622527
Query: 486 acacggt 492
|||||||
Sbjct: 1622528 acacggt 1622534
Score = 46.1 bits (23), Expect = 0.011
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagct 168
|||||||||||| | || || || |||||||| |||||||||||||||||
Sbjct: 1621827 taagaagaccaaaaggacagctccaaagtctgatgatgtctacctcaagct 1621877
>gb|BE038821.1|BE038821 AB07C09 AB Arabidopsis thaliana cDNA 5' similar to 60s ribosomal
protein l18, mRNA sequence
Length = 702
Score = 87.7 bits (44), Expect = 3e-015
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||||||| | ||||| || ||||| || ||||||||||| ||||| ||||||||
Sbjct: 18 taagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaa 77
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||| || ||||| ||||| | || ||||| ||||| ||||| ||||| || ||
Sbjct: 78 gctttaccggtttttggtgaggagatctaacagcaacttcaatgctgtgattctgaaaag 137
Query: 238 gcttttcatgag 249
||||||||||||
Sbjct: 138 gcttttcatgag 149
Score = 63.9 bits (32), Expect = 4e-008
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 374 atgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggt 433
||||||||||||||| ||||||| || |||| || ||||| || |||| || ||||||
Sbjct: 274 atgaaggttactgccttgaggtttactgagagggctagggctagaattgagaaagctggt 333
Query: 434 ggcgagtgcctcacatttgaccagcttgctct 465
|| |||||| | || |||||||||||||||||
Sbjct: 334 ggagagtgcttaacctttgaccagcttgctct 365
>gb|AV825327.1|AV825327 AV825327 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-E24 5',
mRNA sequence
Length = 612
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||| || |||| || || | || |||||||||||| | ||||| || |||
Sbjct: 14 atgggtatcgatcttatcgcaggaggtaagagtaagaagaccaaaaggactgctcctaag 73
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| || ||||||||||| ||||| ||||||||||| ||||| || ||||| ||||| |
Sbjct: 74 tccgatgatgtctacctaaagcttctcgtcaagctttaccggtttttggtgaggagatct 133
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 134 aacagcaacttcaatgctgtgattctgaaaaggcttttcatgag 177
Score = 63.9 bits (32), Expect = 4e-008
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 374 atgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggt 433
||||||||||||||| ||||||| || |||| || ||||| || |||| || ||||||
Sbjct: 302 atgaaggttactgccttgaggtttactgagagggctagggctagaattgagaaagctggt 361
Query: 434 ggcgagtgcctcacatttgaccagcttgctct 465
|| |||||| | || |||||||||||||||||
Sbjct: 362 ggagagtgcttaacctttgaccagcttgctct 393
>gb|AV827922.1|AV827922 AV827922 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-B03 5',
mRNA sequence
Length = 583
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||| || |||| || || | || |||||||||||| | ||||| || |||
Sbjct: 14 atgggtatcgatcttatcgcaggaggtaagagtaagaagaccaaaaggactgctcctaag 73
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| || ||||||||||| ||||| ||||||||||| ||||| || ||||| ||||| |
Sbjct: 74 tccgatgatgtctacctaaagcttctcgtcaagctttaccggtttttggtgaggagatct 133
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 134 aacagcaacttcaatgctgtgattctgaaaaggcttttcatgag 177
Score = 50.1 bits (25), Expect = 7e-004
Identities = 77/93 (82%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 374 atgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggt 433
||||||||||||||| ||||||| || |||| || ||||| || |||| || ||||||
Sbjct: 302 atgaaggttactgccttgaggtttactgagagggctagggctagaattgagaaagctggt 361
Query: 434 ggcgagtgcctca-catttgaccagcttgctct 465
|| |||||| | | | |||||||||||||||||
Sbjct: 362 ggagagtgcttaaccttttgaccagcttgctct 394
>gb|CF652156.1|CF652156 37-L020525-066-003-J09-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001J093Q 5-PRIME, mRNA sequence
Length = 799
Score = 87.7 bits (44), Expect = 3e-015
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||||||| | ||||| || ||||| || ||||||||||| ||||| ||||||||
Sbjct: 27 taagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaa 86
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||| || ||||| ||||| | || ||||| ||||| ||||| ||||| || ||
Sbjct: 87 gctttaccggtttttggtgaggagatctaacagcaacttcaatgctgtgattctgaaaag 146
Query: 238 gcttttcatgag 249
||||||||||||
Sbjct: 147 gcttttcatgag 158
Score = 63.9 bits (32), Expect = 4e-008
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 374 atgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggt 433
||||||||||||||| ||||||| || |||| || ||||| || |||| || ||||||
Sbjct: 283 atgaaggttactgccttgaggtttactgagagggctagggctagaattgagaaagctggt 342
Query: 434 ggcgagtgcctcacatttgaccagcttgctct 465
|| |||||| | || |||||||||||||||||
Sbjct: 343 ggagagtgcttaacctttgaccagcttgctct 374
>gb|AV552035.1|AV552035 AV552035 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ19d02R 5', mRNA sequence
Length = 374
Score = 87.7 bits (44), Expect = 3e-015
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||||||| | ||||| || ||||| || ||||||||||| ||||| ||||||||
Sbjct: 7 taagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaa 66
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||| || ||||| ||||| | || ||||| ||||| ||||| ||||| || ||
Sbjct: 67 gctttaccggtttttggtgaggagatctaacagcaacttcaatgctgtgattctgaaaag 126
Query: 238 gcttttcatgag 249
||||||||||||
Sbjct: 127 gcttttcatgag 138
Score = 63.9 bits (32), Expect = 4e-008
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 374 atgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggt 433
||||||||||||||| ||||||| || |||| || ||||| || |||| || ||||||
Sbjct: 263 atgaaggttactgccttgaggtttactgagagggctagggctagaattgagaaagctggt 322
Query: 434 ggcgagtgcctcacatttgaccagcttgctct 465
|| |||||| | || |||||||||||||||||
Sbjct: 323 ggagagtgcttaacctttgaccagcttgctct 354
>gb|BP813190.1|BP813190 BP813190 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-05-K17 5',
mRNA sequence
Length = 405
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||| || |||| || || | || |||||||||||| | ||||| || |||
Sbjct: 15 atgggtatcgatcttatcgcaggaggtaagagtaagaagaccaaaaggactgctcctaag 74
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| || ||||||||||| ||||| ||||||||||| ||||| || ||||| ||||| |
Sbjct: 75 tccgatgatgtctacctaaagcttctcgtcaagctttaccggtttttggtgaggagatct 134
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 135 aacagcaacttcaatgctgtgattctgaaaaggcttttcatgag 178
Score = 56.0 bits (28), Expect = 1e-005
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 374 atgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaatgctggt 433
||||||||||||||| ||||||| || |||| || ||||| || |||| || ||||||
Sbjct: 303 atgaaggttactgccttgaggtttactgagagggctagggctagaattgagaaagctggt 362
Query: 434 ggcgagtgcctcacatttgaccagcttgctct 465
|| |||||| | || |||||||||||||||||
Sbjct: 363 ggagagtgcttaac-tttgaccagcttgctct 393
>gb|BP813743.1|BP813743 BP813743 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-33-H16 5',
mRNA sequence
Length = 387
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||| || |||| || || | || |||||||||||| | ||||| || |||
Sbjct: 47 atgggtatcgatcttatcgcaggaggtaagagtaagaagaccaaaaggactgctcctaag 106
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| || ||||||||||| ||||| ||||||||||| ||||| || ||||| ||||| |
Sbjct: 107 tccgatgatgtctacctaaagcttctcgtcaagctttaccggtttttggtgaggagatct 166
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgag 249
|| ||||| ||||| ||||| ||||| || ||||||||||||||
Sbjct: 167 aacagcaacttcaatgctgtgattctgaaaaggcttttcatgag 210
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 395,268
Number of Sequences: 1013581
Number of extensions: 395268
Number of successful extensions: 28980
Number of sequences better than 0.5: 253
Number of HSP's better than 0.5 without gapping: 243
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 27630
Number of HSP's gapped (non-prelim): 1298
length of query: 905
length of database: 908,940,872
effective HSP length: 20
effective length of query: 885
effective length of database: 888,669,252
effective search space: 786472288020
effective search space used: 786472288020
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)