BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437842.2.1
(1093 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV563141.1|AV563141 AV563141 Arabidopsis thaliana green ... 52 2e-004
gb|AF106085.1|AF106085 Arabidopsis thaliana 4-coumarate:CoA... 52 2e-004
gb|AF106086.1|AF106086 Arabidopsis thaliana 4-coumarate:CoA... 52 2e-004
gb|AY099695.1| Arabidopsis thaliana putative 4-coumarate:Co... 52 2e-004
gb|BT000296.1| Arabidopsis thaliana putative 4-coumarate:Co... 52 2e-004
emb|AX505882.1| Sequence 577 from Patent WO0216655 52 2e-004
gb|AY376728.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 52 2e-004
emb|BX822773.1|CNS0A78O Arabidopsis thaliana Full-length cD... 52 2e-004
dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosom... 52 2e-004
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 52 2e-004
ref|NM_113019.2| Arabidopsis thaliana 4CL2; 4-coumarate-CoA... 52 2e-004
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 52 2e-004
gb|BP659438.1|BP659438 BP659438 RAFL19 Arabidopsis thaliana... 44 0.050
gb|AF106084.1|AF106084 Arabidopsis thaliana 4-coumarate:CoA... 42 0.20
gb|AY095992.1| Arabidopsis thaliana AT3g21230/MXL8_9 mRNA, ... 42 0.20
gb|BT000614.1| Arabidopsis thaliana putative 4-coumarate:Co... 42 0.20
gb|AY250837.1| Arabidopsis thaliana 4-coumarate-CoA ligase-... 42 0.20
gb|AY376732.1| Arabidopsis thaliana 4-coumarate CoA ligase ... 42 0.20
emb|BX823716.1|CNS0A6KI Arabidopsis thaliana Full-length cD... 42 0.20
emb|BX824168.1|CNS0A6ZK Arabidopsis thaliana Full-length cD... 42 0.20
emb|BX824573.1|CNS0A6WB Arabidopsis thaliana Full-length cD... 42 0.20
emb|BX824596.1|CNS0A6SI Arabidopsis thaliana Full-length cD... 42 0.20
emb|BX822898.1|CNS0A75P Arabidopsis thaliana Full-length cD... 42 0.20
emb|BX823111.1|CNS0A76K Arabidopsis thaliana Full-length cD... 42 0.20
ref|NM_113018.3| Arabidopsis thaliana catalytic AT3G21230 m... 42 0.20
>gb|AV563141.1|AV563141 AV563141 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ182a09F 3', mRNA sequence
Length = 362
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 166 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 215
>gb|AF106085.1|AF106085 Arabidopsis thaliana 4-coumarate:CoA ligase 2 gene, complete cds
Length = 7906
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 3684 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 3733
>gb|AF106086.1|AF106086 Arabidopsis thaliana 4-coumarate:CoA ligase 2 mRNA, complete cds
Length = 1944
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 1264 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 1313
>gb|AY099695.1| Arabidopsis thaliana putative 4-coumarate:CoA ligase 2 (At3g21240)
mRNA, complete cds
Length = 1824
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 1235 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 1284
>gb|BT000296.1| Arabidopsis thaliana putative 4-coumarate:CoA ligase 2 (At3g21240)
mRNA, complete cds
Length = 1744
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 1198 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 1247
>emb|AX505882.1| Sequence 577 from Patent WO0216655
Length = 1671
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 1198 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 1247
>gb|AY376728.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 2 mRNA, complete
cds
Length = 1671
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 1198 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 1247
>emb|BX822773.1|CNS0A78O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB63ZD09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1922
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 1259 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 1308
>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8
Length = 85599
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 36989 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 36940
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 30553 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 30494
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 30493 ccagctgagcttgaagc 30477
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 7407999 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 7407950
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 7401563 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 7401504
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 7401503 ccagctgagcttgaagc 7401487
>ref|NM_113019.2| Arabidopsis thaliana 4CL2; 4-coumarate-CoA ligase AT3G21240 (4CL2)
mRNA, complete cds
Length = 1957
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 1263 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 1312
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 295 ggcgagatatgcatccgcggcgaacaaatcatgaaaggttatctgaatga 344
||||| ||||||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 7455187 ggcgaaatatgcatccgtggcaaccaaatcatgaaaggctatctcaatga 7455138
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 7448751 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 7448692
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 7448691 ccagctgagcttgaagc 7448675
>gb|BP659438.1|BP659438 BP659438 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-39-F20 3',
mRNA sequence
Length = 405
Score = 44.1 bits (22), Expect = 0.050
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 653 tgttctacaagaggatcaacagagttttcttcac 686
|||| |||||||| ||||||| ||||||||||||
Sbjct: 299 tgttttacaagagaatcaacaaagttttcttcac 266
>gb|AF106084.1|AF106084 Arabidopsis thaliana 4-coumarate:CoA ligase 1 gene, complete cds
Length = 3495
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 364 accattgataaggacggatggctgcacactggggacattggttacgtggacgacgacgac 423
||||||||||| ||||||||||| || ||||| || ||||| | | || ||||| |||
Sbjct: 2634 accattgataaagacggatggcttcatactggagatattggattgatcgatgacgatgac 2693
Query: 424 gagatcttcatcgttga 440
||| | |||||||||||
Sbjct: 2694 gagcttttcatcgttga 2710
>gb|AY095992.1| Arabidopsis thaliana AT3g21230/MXL8_9 mRNA, complete cds
Length = 1824
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1296 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1355
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1356 ccagctgagcttgaagc 1372
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1195 tcatgaaaggttatttgaatgatcc 1219
>gb|BT000614.1| Arabidopsis thaliana putative 4-coumarate:CoA ligase 2
(At3g21230/MXL8_9) mRNA, complete cds
Length = 1467
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1123 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1182
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1183 ccagctgagcttgaagc 1199
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1022 tcatgaaaggttatttgaatgatcc 1046
>gb|AY250837.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At3g21230)
mRNA, complete cds
Length = 1713
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1369 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1428
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1429 ccagctgagcttgaagc 1445
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1268 tcatgaaaggttatttgaatgatcc 1292
>gb|AY376732.1| Arabidopsis thaliana 4-coumarate CoA ligase isoform 5 mRNA, complete
cds
Length = 1713
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1369 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1428
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1429 ccagctgagcttgaagc 1445
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1268 tcatgaaaggttatttgaatgatcc 1292
>emb|BX823716.1|CNS0A6KI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS6ZB09 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1839
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1419 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1478
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1479 ccagctgagcttgaagc 1495
>emb|BX824168.1|CNS0A6ZK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH27ZG10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1739
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1343 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1402
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1403 ccagctgagcttgaagc 1419
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1242 tcatgaaaggttatttgaatgatcc 1266
>emb|BX824573.1|CNS0A6WB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH57ZD12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1796
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1405 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1464
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1465 ccagctgagcttgaagc 1481
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1304 tcatgaaaggttatttgaatgatcc 1328
>emb|BX824596.1|CNS0A6SI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH59ZC05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1952
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1414 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1473
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1474 ccagctgagcttgaagc 1490
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1313 tcatgaaaggttatttgaatgatcc 1337
>emb|BX822898.1|CNS0A75P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB70ZH05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1669
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1280 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1339
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1340 ccagctgagcttgaagc 1356
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1179 tcatgaaaggttatttgaatgatcc 1203
>emb|BX823111.1|CNS0A76K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB90ZE03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1810
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1375 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1434
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1435 ccagctgagcttgaagc 1451
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1274 tcatgaaaggttatttgaatgatcc 1298
>ref|NM_113018.3| Arabidopsis thaliana catalytic AT3G21230 mRNA, complete cds
Length = 1957
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 424 gagatcttcatcgttgacaggctgaaggagataatcaaatacaagggcttccaagtacct 483
||||||||||| ||||| || ||||||| | ||||||| ||| |||| |||||| ||
Sbjct: 1422 gagatcttcattgttgatcggttgaaggaactgatcaaattcaaaggctaccaagtggct 1481
Query: 484 cctgcggagcttgaagc 500
|| || |||||||||||
Sbjct: 1482 ccagctgagcttgaagc 1498
Score = 42.1 bits (21), Expect = 0.20
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 323 tcatgaaaggttatctgaatgatcc 347
|||||||||||||| ||||||||||
Sbjct: 1321 tcatgaaaggttatttgaatgatcc 1345
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 438,442
Number of Sequences: 1013581
Number of extensions: 438442
Number of successful extensions: 34370
Number of sequences better than 0.5: 25
Number of HSP's better than 0.5 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33960
Number of HSP's gapped (non-prelim): 410
length of query: 1093
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1073
effective length of database: 888,669,252
effective search space: 953542107396
effective search space used: 953542107396
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)