BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306445.2.1
(1074 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY080658.1| Arabidopsis thaliana unknown protein (At4g31... 121 3e-025
gb|AY133761.1| Arabidopsis thaliana clone U18734 unknown pr... 121 3e-025
emb|BX828130.1|CNS0A3RU Arabidopsis thaliana Full-length cD... 121 3e-025
emb|BX826748.1|CNS0A47H Arabidopsis thaliana Full-length cD... 121 3e-025
ref|NM_119324.2| Arabidopsis thaliana catalytic/ protein ph... 121 3e-025
emb|BX827578.1|CNS0A3PI Arabidopsis thaliana Full-length cD... 113 6e-023
gb|DQ056688.1| Arabidopsis thaliana putative protein phosph... 94 6e-017
ref|NM_122403.1| Arabidopsis thaliana catalytic/ protein ph... 94 6e-017
gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chrom... 74 6e-011
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 74 6e-011
gb|AU238387.1|AU238387 AU238387 RAFL17 Arabidopsis thaliana... 70 9e-010
gb|BP845852.1|BP845852 BP845852 RAFL21 Arabidopsis thaliana... 70 9e-010
gb|BT005431.1| Arabidopsis thaliana clone U50442 putative p... 70 9e-010
gb|AY087522.1| Arabidopsis thaliana clone 36315 mRNA, compl... 70 9e-010
emb|BX833175.1|CNS0A0M6 Arabidopsis thaliana Full-length cD... 70 9e-010
emb|BX832330.1|CNS0A151 Arabidopsis thaliana Full-length cD... 70 9e-010
dbj|AK117549.1| Arabidopsis thaliana At5g10740 mRNA for put... 70 9e-010
ref|NM_121112.3| Arabidopsis thaliana catalytic/ protein ph... 70 9e-010
emb|CR396521.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 1e-008
emb|CR396522.1| Arabidopsis thaliana T-DNA flanking sequenc... 66 1e-008
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 66 1e-008
emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome... 66 1e-008
emb|AL392144.1|ATMAJ23 Arabidopsis thaliana DNA chromosome ... 66 1e-008
gb|BH861389.1|BH861389 SALK_081559 Arabidopsis thaliana TDN... 58 3e-006
gb|AU238901.1|AU238901 AU238901 RAFL19 Arabidopsis thaliana... 58 3e-006
dbj|AK118047.1| Arabidopsis thaliana At5g24940 mRNA for put... 58 3e-006
emb|BX286805.1| Arabidopsis thaliana T-DNA flanking sequenc... 56 1e-005
emb|BX286806.1| Arabidopsis thaliana T-DNA flanking sequenc... 56 1e-005
gb|AY063973.1| Arabidopsis thaliana putative protein phosph... 56 1e-005
gb|AY117193.1| Arabidopsis thaliana putative protein phosph... 56 1e-005
emb|BX818413.1|CNS0AB30 Arabidopsis thaliana Full-length cD... 56 1e-005
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 56 1e-005
emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome... 56 1e-005
emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosom... 56 1e-005
ref|NM_103517.2| Arabidopsis thaliana catalytic/ protein ph... 56 1e-005
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 56 1e-005
gb|CW799546.1|CW799546 WiscDsLox339E05 Arabidopsis thaliana... 54 5e-005
gb|CC798231.1|CC798231 SALK_146020.49.60.x Arabidopsis thal... 52 2e-004
emb|BX002619.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 2e-004
emb|BX285558.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 2e-004
gb|AV785587.1|AV785587 AV785587 RAFL6 Arabidopsis thaliana ... 50 8e-004
gb|BP561961.2|BP561961 BP561961 RAFL9 Arabidopsis thaliana ... 50 8e-004
gb|CW793747.1|CW793747 WiscDsLox302B07 Arabidopsis thaliana... 48 0.003
gb|CW835467.1|CW835467 ET5555.Ds5.08.04.99.b.282 Arabidopsi... 48 0.003
emb|CT026116.1| Arabidopsis thaliana T-DNA flanking sequenc... 48 0.003
gb|AI996582.1|AI996582 701667535 A. thaliana, Columbia Col-... 48 0.003
gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis tha... 48 0.003
emb|BX813494.1|CNS0ABZ9 Arabidopsis thaliana Full-length cD... 48 0.003
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 48 0.003
ref|NM_105450.2| Arabidopsis thaliana catalytic/ protein ph... 48 0.003
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 48 0.003
emb|BX832159.1|CNS0A16E Arabidopsis thaliana Full-length cD... 46 0.013
gb|BP849055.1|BP849055 BP849055 RAFL21 Arabidopsis thaliana... 42 0.20
>gb|AY080658.1| Arabidopsis thaliana unknown protein (At4g31750) mRNA, complete cds
Length = 1453
Score = 121 bits (61), Expect = 3e-025
Identities = 244/305 (80%)
Strand = Plus / Minus
Query: 405 gcttcctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagt 464
|||||||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 986 gcttcctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgaga 927
Query: 465 gtgtcatcaacaacctcctctcggatctccggatccacaaccacatattgctttaagagt 524
| | |||||| ||||| | ||||||||||| |||| ||||| ||||| || |
Sbjct: 926 gagctatcaactttttcctcctgtatctccggatcagcaacaacatactgcttcaacaac 867
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccac 584
| || ||||| ||||| ||||||||||| || || ||||| | ||||||||| ||||||
Sbjct: 866 ctatcgccaaatgcacgagaaacagcaagaactcctccaactctccatgttccagcccac 807
Query: 585 atcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggcttgtga 644
|| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||||||||
Sbjct: 806 atgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggcttgtga 747
Query: 645 tcctttgaaacagcaatagcatttccttccctgcatatgatagccctagagtcaccaaca 704
|| || |||||||||||||| || | |||||||| | ||| |||||||| || |||
Sbjct: 746 tctcgggatacagcaatagcattgccacctctgcatattacagctctagagtcccctaca 687
Query: 705 tttgc 709
|||||
Sbjct: 686 tttgc 682
Score = 60.0 bits (30), Expect = 8e-007
Identities = 126/158 (79%)
Strand = Plus / Minus
Query: 906 gcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatca 965
||||| ||||| |||||||| |||||||| ||||||||||| | || ||||| | ||
Sbjct: 482 gcacctccatgtccatcaaagactccaaatagaccaactatttccccttcaacgccgtcg 423
Query: 966 atttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcca 1025
|| | || ||||||||||| ||||| || | |||||||| || ||||||||||| |||
Sbjct: 422 atcctagtttcatagaagtcctccatagaagatcttttaccgggagagcttgcatatcca 363
Query: 1026 tagctaaatctaccattctggctgaggccgccgccgct 1063
||||| || | || ||||| |||||||| || |||||
Sbjct: 362 tagctgaacttcccgttctgactgaggccaccaccgct 325
>gb|AY133761.1| Arabidopsis thaliana clone U18734 unknown protein (At4g31750) mRNA,
complete cds
Length = 967
Score = 121 bits (61), Expect = 3e-025
Identities = 244/305 (80%)
Strand = Plus / Minus
Query: 405 gcttcctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagt 464
|||||||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 725 gcttcctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgaga 666
Query: 465 gtgtcatcaacaacctcctctcggatctccggatccacaaccacatattgctttaagagt 524
| | |||||| ||||| | ||||||||||| |||| ||||| ||||| || |
Sbjct: 665 gagctatcaactttttcctcctgtatctccggatcagcaacaacatactgcttcaacaac 606
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccac 584
| || ||||| ||||| ||||||||||| || || ||||| | ||||||||| ||||||
Sbjct: 605 ctatcgccaaatgcacgagaaacagcaagaactcctccaactctccatgttccagcccac 546
Query: 585 atcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggcttgtga 644
|| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||||||||
Sbjct: 545 atgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggcttgtga 486
Query: 645 tcctttgaaacagcaatagcatttccttccctgcatatgatagccctagagtcaccaaca 704
|| || |||||||||||||| || | |||||||| | ||| |||||||| || |||
Sbjct: 485 tctcgggatacagcaatagcattgccacctctgcatattacagctctagagtcccctaca 426
Query: 705 tttgc 709
|||||
Sbjct: 425 tttgc 421
Score = 60.0 bits (30), Expect = 8e-007
Identities = 126/158 (79%)
Strand = Plus / Minus
Query: 906 gcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatca 965
||||| ||||| |||||||| |||||||| ||||||||||| | || ||||| | ||
Sbjct: 221 gcacctccatgtccatcaaagactccaaatagaccaactatttccccttcaacgccgtcg 162
Query: 966 atttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcca 1025
|| | || ||||||||||| ||||| || | |||||||| || ||||||||||| |||
Sbjct: 161 atcctagtttcatagaagtcctccatagaagatcttttaccgggagagcttgcatatcca 102
Query: 1026 tagctaaatctaccattctggctgaggccgccgccgct 1063
||||| || | || ||||| |||||||| || |||||
Sbjct: 101 tagctgaacttcccgttctgactgaggccaccaccgct 64
>emb|BX828130.1|CNS0A3RU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH56ZB06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1344
Score = 121 bits (61), Expect = 3e-025
Identities = 244/305 (80%)
Strand = Plus / Minus
Query: 405 gcttcctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagt 464
|||||||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 948 gcttcctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgaga 889
Query: 465 gtgtcatcaacaacctcctctcggatctccggatccacaaccacatattgctttaagagt 524
| | |||||| ||||| | ||||||||||| |||| ||||| ||||| || |
Sbjct: 888 gagctatcaactttttcctcctgtatctccggatcagcaacaacatactgcttcaacaac 829
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccac 584
| || ||||| ||||| ||||||||||| || || ||||| | ||||||||| ||||||
Sbjct: 828 ctatcgccaaatgcacgagaaacagcaagaactcctccaactctccatgttccagcccac 769
Query: 585 atcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggcttgtga 644
|| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||||||||
Sbjct: 768 atgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggcttgtga 709
Query: 645 tcctttgaaacagcaatagcatttccttccctgcatatgatagccctagagtcaccaaca 704
|| || |||||||||||||| || | |||||||| | ||| |||||||| || |||
Sbjct: 708 tctcgggatacagcaatagcattgccacctctgcatattacagctctagagtcccctaca 649
Query: 705 tttgc 709
|||||
Sbjct: 648 tttgc 644
Score = 60.0 bits (30), Expect = 8e-007
Identities = 126/158 (79%)
Strand = Plus / Minus
Query: 906 gcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatca 965
||||| ||||| |||||||| |||||||| ||||||||||| | || ||||| | ||
Sbjct: 444 gcacctccatgtccatcaaagactccaaatagaccaactatttccccttcaacgccgtcg 385
Query: 966 atttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcca 1025
|| | || ||||||||||| ||||| || | |||||||| || ||||||||||| |||
Sbjct: 384 atcctagtttcatagaagtcctccatagaagatcttttaccgggagagcttgcatatcca 325
Query: 1026 tagctaaatctaccattctggctgaggccgccgccgct 1063
||||| || | || ||||| |||||||| || |||||
Sbjct: 324 tagctgaacttcccgttctgactgaggccaccaccgct 287
>emb|BX826748.1|CNS0A47H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB5ZG12 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1374
Score = 121 bits (61), Expect = 3e-025
Identities = 244/305 (80%)
Strand = Plus / Minus
Query: 405 gcttcctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagt 464
|||||||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 971 gcttcctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgaga 912
Query: 465 gtgtcatcaacaacctcctctcggatctccggatccacaaccacatattgctttaagagt 524
| | |||||| ||||| | ||||||||||| |||| ||||| ||||| || |
Sbjct: 911 gagctatcaactttttcctcctgtatctccggatcagcaacaacatactgcttcaacaac 852
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccac 584
| || ||||| ||||| ||||||||||| || || ||||| | ||||||||| ||||||
Sbjct: 851 ctatcgccaaatgcacgagaaacagcaagaactcctccaactctccatgttccagcccac 792
Query: 585 atcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggcttgtga 644
|| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||||||||
Sbjct: 791 atgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggcttgtga 732
Query: 645 tcctttgaaacagcaatagcatttccttccctgcatatgatagccctagagtcaccaaca 704
|| || |||||||||||||| || | |||||||| | ||| |||||||| || |||
Sbjct: 731 tctcgggatacagcaatagcattgccacctctgcatattacagctctagagtcccctaca 672
Query: 705 tttgc 709
|||||
Sbjct: 671 tttgc 667
Score = 60.0 bits (30), Expect = 8e-007
Identities = 126/158 (79%)
Strand = Plus / Minus
Query: 906 gcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatca 965
||||| ||||| |||||||| |||||||| ||||||||||| | || ||||| | ||
Sbjct: 467 gcacctccatgtccatcaaagactccaaatagaccaactatttccccttcaacgccgtcg 408
Query: 966 atttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcca 1025
|| | || ||||||||||| ||||| || | |||||||| || ||||||||||| |||
Sbjct: 407 atcctagtttcatagaagtcctccatagaagatcttttaccgggagagcttgcatatcca 348
Query: 1026 tagctaaatctaccattctggctgaggccgccgccgct 1063
||||| || | || ||||| |||||||| || |||||
Sbjct: 347 tagctgaacttcccgttctgactgaggccaccaccgct 310
>ref|NM_119324.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/
protein serine/threonine phosphatase AT4G31750 mRNA,
complete cds
Length = 1436
Score = 121 bits (61), Expect = 3e-025
Identities = 244/305 (80%)
Strand = Plus / Minus
Query: 405 gcttcctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagt 464
|||||||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 986 gcttcctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgaga 927
Query: 465 gtgtcatcaacaacctcctctcggatctccggatccacaaccacatattgctttaagagt 524
| | |||||| ||||| | ||||||||||| |||| ||||| ||||| || |
Sbjct: 926 gagctatcaactttttcctcctgtatctccggatcagcaacaacatactgcttcaacaac 867
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccac 584
| || ||||| ||||| ||||||||||| || || ||||| | ||||||||| ||||||
Sbjct: 866 ctatcgccaaatgcacgagaaacagcaagaactcctccaactctccatgttccagcccac 807
Query: 585 atcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggcttgtga 644
|| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||||||||
Sbjct: 806 atgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggcttgtga 747
Query: 645 tcctttgaaacagcaatagcatttccttccctgcatatgatagccctagagtcaccaaca 704
|| || |||||||||||||| || | |||||||| | ||| |||||||| || |||
Sbjct: 746 tctcgggatacagcaatagcattgccacctctgcatattacagctctagagtcccctaca 687
Query: 705 tttgc 709
|||||
Sbjct: 686 tttgc 682
Score = 60.0 bits (30), Expect = 8e-007
Identities = 126/158 (79%)
Strand = Plus / Minus
Query: 906 gcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatca 965
||||| ||||| |||||||| |||||||| ||||||||||| | || ||||| | ||
Sbjct: 482 gcacctccatgtccatcaaagactccaaatagaccaactatttccccttcaacgccgtcg 423
Query: 966 atttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcca 1025
|| | || ||||||||||| ||||| || | |||||||| || ||||||||||| |||
Sbjct: 422 atcctagtttcatagaagtcctccatagaagatcttttaccgggagagcttgcatatcca 363
Query: 1026 tagctaaatctaccattctggctgaggccgccgccgct 1063
||||| || | || ||||| |||||||| || |||||
Sbjct: 362 tagctgaacttcccgttctgactgaggccaccaccgct 325
>emb|BX827578.1|CNS0A3PI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS77ZH10 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1343
Score = 113 bits (57), Expect = 6e-023
Identities = 234/293 (79%)
Strand = Plus / Minus
Query: 405 gcttcctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagt 464
|||||||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 934 gcttcctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgaga 875
Query: 465 gtgtcatcaacaacctcctctcggatctccggatccacaaccacatattgctttaagagt 524
| | |||||| ||||| | ||||||||||| |||| ||||| ||||| || |
Sbjct: 874 gagctatcaactttttcctcctgtatctccggatcagcaacaacatactgcttcaacaac 815
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccac 584
| || ||||| ||||| ||||||||||| || || ||||| | ||||||||| ||||||
Sbjct: 814 ctatcgccaaatgcacgagaaacagcaagaactcctccaactctccatgttccagcccac 755
Query: 585 atcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggcttgtga 644
|| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||||||||
Sbjct: 754 atgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggcttgtga 695
Query: 645 tcctttgaaacagcaatagcatttccttccctgcatatgatagccctagagtc 697
|| || |||||||||||||| || | |||||||| | ||| ||||||||
Sbjct: 694 tctcgggatacagcaatagcattgccacctctgcatattacagctctagagtc 642
Score = 60.0 bits (30), Expect = 8e-007
Identities = 126/158 (79%)
Strand = Plus / Minus
Query: 906 gcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatca 965
||||| ||||| |||||||| |||||||| ||||||||||| | || ||||| | ||
Sbjct: 430 gcacctccatgtccatcaaagactccaaatagaccaactatttccccttcaacgccgtcg 371
Query: 966 atttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcca 1025
|| | || ||||||||||| ||||| || | |||||||| || ||||||||||| |||
Sbjct: 370 atcctagtttcatagaagtcctccatagaagatcttttaccgggagagcttgcatatcca 311
Query: 1026 tagctaaatctaccattctggctgaggccgccgccgct 1063
||||| || | || ||||| |||||||| || |||||
Sbjct: 310 tagctgaacttcccgttctgactgaggccaccaccgct 273
>gb|DQ056688.1| Arabidopsis thaliana putative protein phosphatase 2C (At5g24940)
mRNA, complete cds
Length = 1344
Score = 93.7 bits (47), Expect = 6e-017
Identities = 119/143 (83%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatt 968
||||||||||||||||| |||||||| |||||||| || | ||||| | || || ||
Sbjct: 218 ccaccatgaccatcaaagactccaaatagaccaacgatttctccatcgataccgtcgatc 159
Query: 969 tttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccatag 1028
|||||||| | ||||||||||| |||| |||||| |||| ||||||||||| ||||||
Sbjct: 158 cttgtctcaaaaaagtcttccatagatgacctttttccagctgagcttgcatatccatag 99
Query: 1029 ctaaatctaccattctggctgag 1051
|||||| | |||||||| |||||
Sbjct: 98 ctaaattttccattctgactgag 76
Score = 69.9 bits (35), Expect = 9e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 528 tcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccacatc 587
|||||||| || || ||||| ||||| || || ||||| | ||| || ||||||||||||
Sbjct: 602 tcaccaaacgcgcgggaaactgcaagaactcctccaactctccaagtccctgcccacatc 543
Query: 588 acaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggcttgtgatcc 647
|||||||| ||||||| ||||| || | ||||||||| |||| ||||| || || ||
Sbjct: 542 acaaaaccaccagcattctcaatccgttcacgctcatcactttggtcaggtttatggtct 483
Query: 648 tttgaaacagcaatagcatttcc 670
|||||||||||| ||||||||
Sbjct: 482 cttgaaacagcaaatgcatttcc 460
>ref|NM_122403.1| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/ protein
serine/threonine phosphatase AT5G24940 mRNA, complete cds
Length = 1344
Score = 93.7 bits (47), Expect = 6e-017
Identities = 119/143 (83%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatt 968
||||||||||||||||| |||||||| |||||||| || | ||||| | || || ||
Sbjct: 218 ccaccatgaccatcaaagactccaaatagaccaacgatttctccatcgataccgtcgatc 159
Query: 969 tttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccatag 1028
|||||||| | ||||||||||| |||| |||||| |||| ||||||||||| ||||||
Sbjct: 158 cttgtctcaaaaaagtcttccatagatgacctttttccagctgagcttgcatatccatag 99
Query: 1029 ctaaatctaccattctggctgag 1051
|||||| | |||||||| |||||
Sbjct: 98 ctaaattttccattctgactgag 76
Score = 69.9 bits (35), Expect = 9e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 528 tcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccacatc 587
|||||||| || || ||||| ||||| || || ||||| | ||| || ||||||||||||
Sbjct: 602 tcaccaaacgcgcgggaaactgcaagaactcctccaactctccaagtccctgcccacatc 543
Query: 588 acaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggcttgtgatcc 647
|||||||| ||||||| ||||| || | ||||||||| |||| ||||| || || ||
Sbjct: 542 acaaaaccaccagcattctcaatccgttcacgctcatcactttggtcaggtttatggtct 483
Query: 648 tttgaaacagcaatagcatttcc 670
|||||||||||| ||||||||
Sbjct: 482 cttgaaacagcaaatgcatttcc 460
>gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome IV, near 60.5 cM, complete
sequence
Length = 99123
Score = 73.8 bits (37), Expect = 6e-011
Identities = 106/129 (82%)
Strand = Plus / Minus
Query: 917 accatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatttttgtctc 976
||||||||| |||||||| |||||||| || | ||||| | || || || |||||||
Sbjct: 20642 accatcaaagactccaaatagaccaacgatttctccatcgataccgtcgatccttgtctc 20583
Query: 977 atagaagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatct 1036
| | ||||||||||| |||| |||||| |||| ||||||||||| |||||||||||| |
Sbjct: 20582 aaaaaagtcttccatagatgacctttttccagctgagcttgcatatccatagctaaattt 20523
Query: 1037 accattctg 1045
||||||||
Sbjct: 20522 tccattctg 20514
Score = 58.0 bits (29), Expect = 3e-006
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 576 cctgcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatca 635
|||||||||||||||||||| ||||||| ||||| || | ||||||||| |||| |||
Sbjct: 21320 cctgcccacatcacaaaaccaccagcattctcaatccgttcacgctcatcactttggtca 21261
Query: 636 ggcttgtgatcctttgaaacagcaa 660
|| || || || ||||||||||||
Sbjct: 21260 ggtttatggtctcttgaaacagcaa 21236
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 73.8 bits (37), Expect = 6e-011
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatttttgtctc 976
||||||||| |||||||| |||||||| || | ||||| | || || || |||||||
Sbjct: 8593126 accatcaaagactccaaatagaccaacgatttctccatcgataccgtcgatccttgtctc 8593185
Query: 977 atagaagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatct 1036
| | ||||||||||| |||| |||||| |||| ||||||||||| |||||||||||| |
Sbjct: 8593186 aaaaaagtcttccatagatgacctttttccagctgagcttgcatatccatagctaaattt 8593245
Query: 1037 accattctg 1045
||||||||
Sbjct: 8593246 tccattctg 8593254
Score = 65.9 bits (33), Expect = 1e-008
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 3395470 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 3395529
Query: 1041 ttctggctg 1049
|||||||||
Sbjct: 3395530 ttctggctg 3395538
Score = 58.0 bits (29), Expect = 3e-006
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 576 cctgcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatca 635
|||||||||||||||||||| ||||||| ||||| || | ||||||||| |||| |||
Sbjct: 8592448 cctgcccacatcacaaaaccaccagcattctcaatccgttcacgctcatcactttggtca 8592507
Query: 636 ggcttgtgatcctttgaaacagcaa 660
|| || || || ||||||||||||
Sbjct: 8592508 ggtttatggtctcttgaaacagcaa 8592532
Score = 52.0 bits (26), Expect = 2e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactat 946
|||||||||||||||||| |||||||||||
Sbjct: 3395406 accatcaaaaactccaaatagaccaactat 3395435
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 3394227 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 3394286
Query: 469 catcaa 474
||||||
Sbjct: 3394287 catcaa 3394292
>gb|AU238387.1|AU238387 AU238387 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-20-B01 5',
mRNA sequence
Length = 630
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 344 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 285
Query: 1041 ttctggctgag 1051
|||||||||||
Sbjct: 284 ttctggctgag 274
Score = 60.0 bits (30), Expect = 8e-007
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactat 946
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 416 ccaccatggccatcaaaaactccaaatagaccaactat 379
>gb|BP845852.1|BP845852 BP845852 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-A06 5',
mRNA sequence
Length = 406
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 379 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 320
Query: 1041 ttctggctgag 1051
|||||||||||
Sbjct: 319 ttctggctgag 309
>gb|BT005431.1| Arabidopsis thaliana clone U50442 putative protein phosphatase 2C
(At5g10740) mRNA, complete cds
Length = 1096
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 146 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 87
Query: 1041 ttctggctgag 1051
|||||||||||
Sbjct: 86 ttctggctgag 76
Score = 60.0 bits (30), Expect = 8e-007
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactat 946
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 218 ccaccatggccatcaaaaactccaaatagaccaactat 181
Score = 56.0 bits (28), Expect = 1e-005
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 528 tcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccacatc 587
|||||||| ||||| ||||| ||||| || || || || | ||| |||||||||||||||
Sbjct: 602 tcaccaaacgcacgagaaactgcaagaactcctcctaccctccaagttcctgcccacatc 543
Query: 588 acaaaacctccagcat 603
||||| || |||||||
Sbjct: 542 acaaatccaccagcat 527
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 721 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 662
Query: 469 catcaa 474
||||||
Sbjct: 661 catcaa 656
>gb|AY087522.1| Arabidopsis thaliana clone 36315 mRNA, complete sequence
Length = 1479
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 339 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 280
Query: 1041 ttctggctgag 1051
|||||||||||
Sbjct: 279 ttctggctgag 269
Score = 60.0 bits (30), Expect = 8e-007
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactat 946
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 411 ccaccatggccatcaaaaactccaaatagaccaactat 374
Score = 56.0 bits (28), Expect = 1e-005
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 528 tcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccacatc 587
|||||||| ||||| ||||| ||||| || || || || | ||| |||||||||||||||
Sbjct: 795 tcaccaaacgcacgagaaactgcaagaactcctcctaccctccaagttcctgcccacatc 736
Query: 588 acaaaacctccagcat 603
||||| || |||||||
Sbjct: 735 acaaatccaccagcat 720
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 914 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 855
Query: 469 catcaa 474
||||||
Sbjct: 854 catcaa 849
>emb|BX833175.1|CNS0A0M6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL37ZG06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1367
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 231 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 172
Query: 1041 ttctggctgag 1051
|||||||||||
Sbjct: 171 ttctggctgag 161
Score = 60.0 bits (30), Expect = 8e-007
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactat 946
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 303 ccaccatggccatcaaaaactccaaatagaccaactat 266
Score = 56.0 bits (28), Expect = 1e-005
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 528 tcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccacatc 587
|||||||| ||||| ||||| ||||| || || || || | ||| |||||||||||||||
Sbjct: 687 tcaccaaacgcacgagaaactgcaagaactcctcctaccctccaagttcctgcccacatc 628
Query: 588 acaaaacctccagcat 603
||||| || |||||||
Sbjct: 627 acaaatccaccagcat 612
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 806 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 747
Query: 469 catcaa 474
||||||
Sbjct: 746 catcaa 741
>emb|BX832330.1|CNS0A151 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH66ZB04 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1451
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 359 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 300
Query: 1041 ttctggctgag 1051
|||||||||||
Sbjct: 299 ttctggctgag 289
Score = 60.0 bits (30), Expect = 8e-007
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactat 946
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 431 ccaccatggccatcaaaaactccaaatagaccaactat 394
Score = 56.0 bits (28), Expect = 1e-005
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 528 tcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccacatc 587
|||||||| ||||| ||||| ||||| || || || || | ||| |||||||||||||||
Sbjct: 815 tcaccaaacgcacgagaaactgcaagaactcctcctaccctccaagttcctgcccacatc 756
Query: 588 acaaaacctccagcat 603
||||| || |||||||
Sbjct: 755 acaaatccaccagcat 740
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 934 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 875
Query: 469 catcaa 474
||||||
Sbjct: 874 catcaa 869
>dbj|AK117549.1| Arabidopsis thaliana At5g10740 mRNA for putative protein phosphatase
2C, complete cds, clone: RAFL17-20-B01
Length = 1491
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 344 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 285
Query: 1041 ttctggctgag 1051
|||||||||||
Sbjct: 284 ttctggctgag 274
Score = 60.0 bits (30), Expect = 8e-007
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactat 946
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 416 ccaccatggccatcaaaaactccaaatagaccaactat 379
Score = 56.0 bits (28), Expect = 1e-005
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 528 tcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccacatc 587
|||||||| ||||| ||||| ||||| || || || || | ||| |||||||||||||||
Sbjct: 800 tcaccaaacgcacgagaaactgcaagaactcctcctaccctccaagttcctgcccacatc 741
Query: 588 acaaaacctccagcat 603
||||| || |||||||
Sbjct: 740 acaaatccaccagcat 725
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 919 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 860
Query: 469 catcaa 474
||||||
Sbjct: 859 catcaa 854
>ref|NM_121112.3| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/ protein
serine/threonine phosphatase AT5G10740 mRNA, complete cds
Length = 1513
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 366 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 307
Query: 1041 ttctggctgag 1051
|||||||||||
Sbjct: 306 ttctggctgag 296
Score = 60.0 bits (30), Expect = 8e-007
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 909 ccaccatgaccatcaaaaactccaaaaagaccaactat 946
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 438 ccaccatggccatcaaaaactccaaatagaccaactat 401
Score = 56.0 bits (28), Expect = 1e-005
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 528 tcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgcccacatc 587
|||||||| ||||| ||||| ||||| || || || || | ||| |||||||||||||||
Sbjct: 822 tcaccaaacgcacgagaaactgcaagaactcctcctaccctccaagttcctgcccacatc 763
Query: 588 acaaaacctccagcat 603
||||| || |||||||
Sbjct: 762 acaaatccaccagcat 747
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 941 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 882
Query: 469 catcaa 474
||||||
Sbjct: 881 catcaa 876
>emb|CR396521.1| Arabidopsis thaliana T-DNA flanking sequence GK-365G02-026787,
genomic survey sequence
Length = 265
Score = 65.9 bits (33), Expect = 1e-008
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 177 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 236
Query: 1041 ttctggctg 1049
|||||||||
Sbjct: 237 ttctggctg 245
Score = 52.0 bits (26), Expect = 2e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactat 946
|||||||||||||||||| |||||||||||
Sbjct: 113 accatcaaaaactccaaatagaccaactat 142
>emb|CR396522.1| Arabidopsis thaliana T-DNA flanking sequence GK-365G02-026821,
genomic survey sequence
Length = 300
Score = 65.9 bits (33), Expect = 1e-008
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 212 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 271
Query: 1041 ttctggctg 1049
|||||||||
Sbjct: 272 ttctggctg 280
Score = 52.0 bits (26), Expect = 2e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactat 946
|||||||||||||||||| |||||||||||
Sbjct: 148 accatcaaaaactccaaatagaccaactat 177
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 65.9 bits (33), Expect = 1e-008
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 3208438 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 3208497
Query: 1041 ttctggctg 1049
|||||||||
Sbjct: 3208498 ttctggctg 3208506
Score = 52.0 bits (26), Expect = 2e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactat 946
|||||||||||||||||| |||||||||||
Sbjct: 3208374 accatcaaaaactccaaatagaccaactat 3208403
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 3207195 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 3207254
Query: 469 catcaa 474
||||||
Sbjct: 3207255 catcaa 3207260
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA
project)
Length = 98473
Score = 65.9 bits (33), Expect = 1e-008
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 3097 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 3156
Query: 1041 ttctggctg 1049
|||||||||
Sbjct: 3157 ttctggctg 3165
Score = 52.0 bits (26), Expect = 2e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactat 946
|||||||||||||||||| |||||||||||
Sbjct: 3033 accatcaaaaactccaaatagaccaactat 3062
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 1853 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 1912
Query: 469 catcaa 474
||||||
Sbjct: 1913 catcaa 1918
>emb|AL392144.1|ATMAJ23 Arabidopsis thaliana DNA chromosome 5, P1 clone MAJ23 (ESSA project)
Length = 42694
Score = 65.9 bits (33), Expect = 1e-008
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 981 aagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaatctacca 1040
||||||||||| |||| || || |||| |||||||||||| |||||||||||| | |||
Sbjct: 35471 aagtcttccatagatgatctcttgccagcggagcttgcatatccatagctaaattttcca 35530
Query: 1041 ttctggctg 1049
|||||||||
Sbjct: 35531 ttctggctg 35539
Score = 52.0 bits (26), Expect = 2e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactat 946
|||||||||||||||||| |||||||||||
Sbjct: 35407 accatcaaaaactccaaatagaccaactat 35436
Score = 44.1 bits (22), Expect = 0.050
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgagtgtgt 468
|||| ||||||| ||||||||||| ||||||||||| || || | |||||| || || |
Sbjct: 34228 cctcattagagaaaacatcccacagtccatcacttgctagaatcaaaaactcaagagtat 34287
Query: 469 catcaa 474
||||||
Sbjct: 34288 catcaa 34293
>gb|BH861389.1|BH861389 SALK_081559 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_081559, DNA sequence
Length = 240
Score = 58.0 bits (29), Expect = 3e-006
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 576 cctgcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatca 635
|||||||||||||||||||| ||||||| ||||| || | ||||||||| |||| |||
Sbjct: 134 cctgcccacatcacaaaaccaccagcattctcaatccgttcacgctcatcactttggtca 193
Query: 636 ggcttgtgatcctttgaaacagcaa 660
|| || || || ||||||||||||
Sbjct: 194 ggtttatggtctcttgaaacagcaa 218
>gb|AU238901.1|AU238901 AU238901 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-29-B08 5',
mRNA sequence
Length = 657
Score = 58.0 bits (29), Expect = 3e-006
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 576 cctgcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatca 635
|||||||||||||||||||| ||||||| ||||| || | ||||||||| |||| |||
Sbjct: 530 cctgcccacatcacaaaaccaccagcattctcaatccgttcacgctcatcactttggtca 471
Query: 636 ggcttgtgatcctttgaaacagcaa 660
|| || || || ||||||||||||
Sbjct: 470 ggtttatggtctcttgaaacagcaa 446
>dbj|AK118047.1| Arabidopsis thaliana At5g24940 mRNA for putative Protein
phosphatase 2C, complete cds, clone: RAFL19-29-B08
Length = 1792
Score = 58.0 bits (29), Expect = 3e-006
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 576 cctgcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatca 635
|||||||||||||||||||| ||||||| ||||| || | ||||||||| |||| |||
Sbjct: 530 cctgcccacatcacaaaaccaccagcattctcaatccgttcacgctcatcactttggtca 471
Query: 636 ggcttgtgatcctttgaaacagcaa 660
|| || || || ||||||||||||
Sbjct: 470 ggtttatggtctcttgaaacagcaa 446
>emb|BX286805.1| Arabidopsis thaliana T-DNA flanking sequence GK-394B09-018293,
genomic survey sequence
Length = 495
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 579 gcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggc 638
|||||||| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||
Sbjct: 320 gcccacatgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggc 379
Query: 639 ttgtgatc 646
||||||||
Sbjct: 380 ttgtgatc 387
>emb|BX286806.1| Arabidopsis thaliana T-DNA flanking sequence GK-394B09-018297,
genomic survey sequence
Length = 489
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 579 gcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggc 638
|||||||| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||
Sbjct: 242 gcccacatgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggc 301
Query: 639 ttgtgatc 646
||||||||
Sbjct: 302 ttgtgatc 309
>gb|AY063973.1| Arabidopsis thaliana putative protein phosphatase type 2C
(At1g43900) mRNA, complete cds
Length = 1253
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 558 ccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatcttcaatacgctgc 617
|||||||| ||||||||||| ||||| || | ||| || |||||||||||||| || ||
Sbjct: 856 ccaccaactcgccatgttccagcccaaataataaagccaccagcatcttcaatccgttgt 797
Query: 618 cgctcatc 625
||||||||
Sbjct: 796 cgctcatc 789
>gb|AY117193.1| Arabidopsis thaliana putative protein phosphatase type 2C
(At1g43900) mRNA, complete cds
Length = 1147
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 558 ccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatcttcaatacgctgc 617
|||||||| ||||||||||| ||||| || | ||| || |||||||||||||| || ||
Sbjct: 842 ccaccaactcgccatgttccagcccaaataataaagccaccagcatcttcaatccgttgt 783
Query: 618 cgctcatc 625
||||||||
Sbjct: 782 cgctcatc 775
>emb|BX818413.1|CNS0AB30 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL78ZA02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1072
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 558 ccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatcttcaatacgctgc 617
|||||||| ||||||||||| ||||| || | ||| || |||||||||||||| || ||
Sbjct: 713 ccaccaactcgccatgttccagcccaaataataaagccaccagcatcttcaatccgttgt 654
Query: 618 cgctcatc 625
||||||||
Sbjct: 653 cgctcatc 646
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 579 gcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggc 638
|||||||| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||
Sbjct: 11278224 gcccacatgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggc 11278283
Query: 639 ttgtgatc 646
||||||||
Sbjct: 11278284 ttgtgatc 11278291
Score = 54.0 bits (27), Expect = 5e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgag 463
|||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 11277754 cctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgag 11277808
Score = 52.0 bits (26), Expect = 2e-004
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatttttgtctc 976
||||||||| |||||||| ||||||||||| | || ||||| | || || | || ||
Sbjct: 11279345 accatcaaagactccaaatagaccaactatttccccttcaacgccgtcgatcctagtttc 11279404
Query: 977 atagaagtcttccatggatgcccttttaccaggggagcttgcatagccatagct 1030
||||||||| ||||| || | |||||||| || ||||||||||| ||||||||
Sbjct: 11279405 atagaagtcctccatagaagatcttttaccgggagagcttgcatatccatagct 11279458
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII
project)
Length = 90902
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 579 gcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggc 638
|||||||| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||
Sbjct: 21879 gcccacatgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggc 21820
Query: 639 ttgtgatc 646
||||||||
Sbjct: 21819 ttgtgatc 21812
Score = 54.0 bits (27), Expect = 5e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgag 463
|||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 22349 cctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgag 22295
Score = 52.0 bits (26), Expect = 2e-004
Identities = 92/114 (80%)
Strand = Plus / Minus
Query: 917 accatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatttttgtctc 976
||||||||| |||||||| ||||||||||| | || ||||| | || || | || ||
Sbjct: 20758 accatcaaagactccaaatagaccaactatttccccttcaacgccgtcgatcctagtttc 20699
Query: 977 atagaagtcttccatggatgcccttttaccaggggagcttgcatagccatagct 1030
||||||||| ||||| || | |||||||| || ||||||||||| ||||||||
Sbjct: 20698 atagaagtcctccatagaagatcttttaccgggagagcttgcatatccatagct 20645
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
Length = 196242
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 579 gcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggc 638
|||||||| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||
Sbjct: 131392 gcccacatgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggc 131451
Query: 639 ttgtgatc 646
||||||||
Sbjct: 131452 ttgtgatc 131459
Score = 54.0 bits (27), Expect = 5e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgag 463
|||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 130922 cctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgag 130976
Score = 52.0 bits (26), Expect = 2e-004
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatttttgtctc 976
||||||||| |||||||| ||||||||||| | || ||||| | || || | || ||
Sbjct: 132513 accatcaaagactccaaatagaccaactatttccccttcaacgccgtcgatcctagtttc 132572
Query: 977 atagaagtcttccatggatgcccttttaccaggggagcttgcatagccatagct 1030
||||||||| ||||| || | |||||||| || ||||||||||| ||||||||
Sbjct: 132573 atagaagtcctccatagaagatcttttaccgggagagcttgcatatccatagct 132626
>ref|NM_103517.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/
protein serine/threonine phosphatase AT1G43900 mRNA,
complete cds
Length = 1751
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 558 ccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatcttcaatacgctgc 617
|||||||| ||||||||||| ||||| || | ||| || |||||||||||||| || ||
Sbjct: 842 ccaccaactcgccatgttccagcccaaataataaagccaccagcatcttcaatccgttgt 783
Query: 618 cgctcatc 625
||||||||
Sbjct: 782 cgctcatc 775
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 579 gcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggc 638
|||||||| ||||| ||||| ||||| ||||| | || ||||| ||| |||||||||||
Sbjct: 15365454 gcccacatgacaaatcctcctgcatcctcaattctttggcgctcgtcactttgatcaggc 15365513
Query: 639 ttgtgatc 646
||||||||
Sbjct: 15365514 ttgtgatc 15365521
Score = 54.0 bits (27), Expect = 5e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgag 463
|||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 15364984 cctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgag 15365038
Score = 52.0 bits (26), Expect = 2e-004
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatttttgtctc 976
||||||||| |||||||| ||||||||||| | || ||||| | || || | || ||
Sbjct: 15366575 accatcaaagactccaaatagaccaactatttccccttcaacgccgtcgatcctagtttc 15366634
Query: 977 atagaagtcttccatggatgcccttttaccaggggagcttgcatagccatagct 1030
||||||||| ||||| || | |||||||| || ||||||||||| ||||||||
Sbjct: 15366635 atagaagtcctccatagaagatcttttaccgggagagcttgcatatccatagct 15366688
>gb|CW799546.1|CW799546 WiscDsLox339E05 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 892
Score = 54.0 bits (27), Expect = 5e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 409 cctcgttagagaccacatcccacagcccatcacttgcaaggataagaaactcgag 463
|||||||||| || || ||||| || |||||||||||||| || |||||||||||
Sbjct: 694 cctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaactcgag 640
>gb|CC798231.1|CC798231 SALK_146020.49.60.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_146020.49.60.x,
DNA sequence
Length = 433
Score = 52.0 bits (26), Expect = 2e-004
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaatttttgtctc 976
||||||||| |||||||| ||||||||||| | || ||||| | || || | || ||
Sbjct: 315 accatcaaagactccaaatagaccaactatttccccttcaacgccgtcgatcctagtttc 374
Query: 977 atagaagtcttccatggatgcccttttaccaggggagcttgcatagccatagct 1030
||||||||| ||||| || | |||||||| || ||||||||||| ||||||||
Sbjct: 375 atagaagtcctccatagaagatcttttaccgggagagcttgcatatccatagct 428
>emb|BX002619.1| Arabidopsis thaliana T-DNA flanking sequence GK-365H02-017044,
genomic survey sequence
Length = 188
Score = 52.0 bits (26), Expect = 2e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactat 946
|||||||||||||||||| |||||||||||
Sbjct: 47 accatcaaaaactccaaatagaccaactat 76
>emb|BX285558.1| Arabidopsis thaliana T-DNA flanking sequence GK-383G02-017266,
genomic survey sequence
Length = 264
Score = 52.0 bits (26), Expect = 2e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 917 accatcaaaaactccaaaaagaccaactat 946
|||||||||||||||||| |||||||||||
Sbjct: 124 accatcaaaaactccaaatagaccaactat 153
>gb|AV785587.1|AV785587 AV785587 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-67-H11 3',
mRNA sequence
Length = 446
Score = 50.1 bits (25), Expect = 8e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 558 ccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatcttcaat 610
|||||||| ||||||||||| ||||| || | ||| || ||||||||||||||
Sbjct: 382 ccaccaactcgccatgttccagcccaaataataaagccaccagcatcttcaat 434
>gb|BP561961.2|BP561961 BP561961 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-37-O04 5', mRNA
sequence
Length = 493
Score = 50.1 bits (25), Expect = 8e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 975 tcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccatagctaaat 1034
||||||||||| ||||| || | |||||||| || ||||||||||| |||||||| ||
Sbjct: 415 tcatagaagtcctccatagaagatcttttaccgggagagcttgcatatccatagctgaac 356
Query: 1035 ctaccattctggctgaggccgccgccgct 1063
| || ||||| |||||||| || |||||
Sbjct: 355 ttcccgttctgactgaggccaccaccgct 327
>gb|CW793747.1|CW793747 WiscDsLox302B07 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 1211
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 903 ttagcaccaccatgaccatcaaaaactccaaa 934
|||||||| |||||||||||| ||||||||||
Sbjct: 186 ttagcacctccatgaccatcataaactccaaa 155
>gb|CW835467.1|CW835467 ET5555.Ds5.08.04.99.b.282 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET5555, DNA sequence
Length = 282
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 903 ttagcaccaccatgaccatcaaaaactccaaa 934
|||||||| |||||||||||| ||||||||||
Sbjct: 33 ttagcacctccatgaccatcataaactccaaa 2
>emb|CT026116.1| Arabidopsis thaliana T-DNA flanking sequence GK-123C01-012812,
genomic survey sequence
Length = 233
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 903 ttagcaccaccatgaccatcaaaaactccaaa 934
|||||||| |||||||||||| ||||||||||
Sbjct: 106 ttagcacctccatgaccatcataaactccaaa 75
>gb|AI996582.1|AI996582 701667535 A. thaliana, Columbia Col-0, root-1 Arabidopsis thaliana
cDNA clone 701667535, mRNA sequence
Length = 600
Score = 48.1 bits (24), Expect = 0.003
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 407 ttcctcgttagagaccacatcccacagcccatcacttgcaaggataagaaac 458
|||||||||||| || || ||||| || |||||||||||||| || ||||||
Sbjct: 425 ttcctcgttagatacaacgtcccagagaccatcacttgcaagaatgagaaac 476
>gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis thaliana BAC F12A21 from chromosome I,
complete sequence
Length = 114190
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 903 ttagcaccaccatgaccatcaaaaactccaaa 934
|||||||| |||||||||||| ||||||||||
Sbjct: 12908 ttagcacctccatgaccatcataaactccaaa 12939
>emb|BX813494.1|CNS0ABZ9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB20ZD03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1375
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 903 ttagcaccaccatgaccatcaaaaactccaaa 934
|||||||| |||||||||||| ||||||||||
Sbjct: 442 ttagcacctccatgaccatcataaactccaaa 411
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 903 ttagcaccaccatgaccatcaaaaactccaaa 934
|||||||| |||||||||||| ||||||||||
Sbjct: 9671772 ttagcacctccatgaccatcataaactccaaa 9671741
>ref|NM_105450.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/
protein serine/threonine phosphatase AT1G67820 mRNA,
complete cds
Length = 1945
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 903 ttagcaccaccatgaccatcaaaaactccaaa 934
|||||||| |||||||||||| ||||||||||
Sbjct: 514 ttagcacctccatgaccatcataaactccaaa 483
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 516,738
Number of Sequences: 1013581
Number of extensions: 516738
Number of successful extensions: 38242
Number of sequences better than 0.5: 53
Number of HSP's better than 0.5 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36495
Number of HSP's gapped (non-prelim): 1737
length of query: 1074
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1054
effective length of database: 888,669,252
effective search space: 936657391608
effective search space used: 936657391608
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)