BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306434.2.3
(3914 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synth... 182 3e-043
emb|AX505864.1| Sequence 559 from Patent WO0216655 182 3e-043
ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synt... 182 3e-043
gb|AI992761.1|AI992761 701493456 A. thaliana, Ohio State cl... 129 4e-027
gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synth... 129 4e-027
dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-g... 129 4e-027
gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA... 129 4e-027
emb|AX030944.1| Sequence 7 from Patent WO9800549 129 4e-027
gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene... 129 4e-027
ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM... 129 4e-027
ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNT... 121 1e-024
dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-g... 115 6e-023
emb|AX030942.1| Sequence 5 from Patent WO9800549 115 6e-023
gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R1... 115 6e-023
ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNT... 115 6e-023
gb|AV823575.1|AV823575 AV823575 RAFL5 Arabidopsis thaliana ... 113 2e-022
gb|BP840603.1|BP840603 BP840603 RAFL19 Arabidopsis thaliana... 113 2e-022
gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synth... 113 2e-022
emb|AX507835.1| Sequence 2530 from Patent WO0216655 113 2e-022
ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNT... 113 2e-022
gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synth... 109 4e-021
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 109 4e-021
emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome ... 109 4e-021
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 109 4e-021
dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-g... 107 1e-020
emb|AX030948.1| Sequence 11 from Patent WO9800549 107 1e-020
emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cD... 105 6e-020
dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-g... 103 2e-019
emb|AX030938.1| Sequence 1 from Patent WO9800549 103 2e-019
gb|CB253730.1|CB253730 90-E010932-019-003-C24-T7R MPIZ-ADIS... 98 1e-017
dbj|BD022675.1| Manipulation of cellulose and/or beta-1,4-g... 98 1e-017
emb|AX030941.1| Sequence 4 from Patent WO9800549 98 1e-017
gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8... 98 1e-017
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 98 1e-017
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 98 1e-017
emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosom... 98 1e-017
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 98 1e-017
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 98 1e-017
ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNT... 96 6e-017
gb|AY059858.1| Arabidopsis thaliana cellulose synthase cata... 94 2e-016
gb|AY093308.1| Arabidopsis thaliana cellulose synthase cata... 94 2e-016
gb|CF651830.1|CF651830 17-L020525-066-003-B05-SP6P MPIZ-ADI... 90 3e-015
gb|BP819896.1|BP819896 BP819896 RAFL19 Arabidopsis thaliana... 90 3e-015
gb|BP824749.1|BP824749 BP824749 RAFL19 Arabidopsis thaliana... 90 3e-015
gb|BP831231.1|BP831231 BP831231 RAFL19 Arabidopsis thaliana... 90 3e-015
gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like... 90 3e-015
emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome... 90 3e-015
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 90 3e-015
dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose syn... 90 3e-015
ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNT... 90 3e-015
gb|CB255846.1|CB255846 17-E011665-027-006-B05-T7R MPIZ-ADIS... 86 5e-014
gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX... 84 2e-013
gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R5... 84 2e-013
gb|BT006111.1| Arabidopsis thaliana clone U50150 putative c... 84 2e-013
ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNT... 84 2e-013
gb|BP832279.1|BP832279 BP832279 RAFL19 Arabidopsis thaliana... 82 8e-013
gb|BP837495.1|BP837495 BP837495 RAFL19 Arabidopsis thaliana... 82 8e-013
dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosom... 82 8e-013
gb|BH748699.1|BH748699 SALK_046453.54.75.x Arabidopsis thal... 80 3e-012
gb|BE521782.1|BE521782 M21E12STM Arabidopsis developing see... 78 1e-011
dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosom... 78 1e-011
emb|AL758408.1| Arabidopsis thaliana T-DNA flanking sequenc... 76 5e-011
gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State cl... 76 5e-011
gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synth... 76 5e-011
dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-g... 76 5e-011
emb|AX030946.1| Sequence 9 from Patent WO9800549 76 5e-011
gb|BT002335.1| Arabidopsis thaliana clone C104938 putative ... 76 5e-011
dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosom... 76 5e-011
ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNT... 76 5e-011
gb|N96707.1|N96707 21510 CD4-15 Arabidopsis thaliana cDNA c... 74 2e-010
gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synth... 74 2e-010
gb|AI994381.1|AI994381 701493467 A. thaliana, Ohio State cl... 72 8e-010
gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synth... 72 8e-010
dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-g... 72 8e-010
emb|AX030940.1| Sequence 3 from Patent WO9800549 72 8e-010
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 72 8e-010
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 72 8e-010
gb|AQ955592.1|AQ955592 LERAE88TF LERA Arabidopsis thaliana ... 70 3e-009
gb|H36425.1|H36425 14093 Lambda-PRL2 Arabidopsis thaliana c... 70 3e-009
gb|T20516.1|T20516 2524 Lambda-PRL2 Arabidopsis thaliana cD... 66 5e-008
gb|AV782576.1|AV782576 AV782576 RAFL4 Arabidopsis thaliana ... 66 5e-008
gb|AV528526.1|AV528526 AV528526 Arabidopsis thaliana aboveg... 66 5e-008
gb|AV530113.1|AV530113 AV530113 Arabidopsis thaliana aboveg... 66 5e-008
gb|AV538027.1|AV538027 AV538027 Arabidopsis thaliana roots ... 66 5e-008
gb|AV546309.1|AV546309 AV546309 Arabidopsis thaliana roots ... 66 5e-008
gb|AV546311.1|AV546311 AV546311 Arabidopsis thaliana roots ... 66 5e-008
gb|AV546312.1|AV546312 AV546312 Arabidopsis thaliana roots ... 66 5e-008
gb|AV547629.1|AV547629 AV547629 Arabidopsis thaliana roots ... 66 5e-008
gb|AV552905.1|AV552905 AV552905 Arabidopsis thaliana roots ... 66 5e-008
gb|AV562949.1|AV562949 AV562949 Arabidopsis thaliana green ... 66 5e-008
gb|CK120272.1|CK120272 207o02.p1 AtM1 Arabidopsis thaliana ... 66 5e-008
gb|CK121679.1|CK121679 202d06.p1 AtM1 Arabidopsis thaliana ... 66 5e-008
emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cD... 66 5e-008
gb|AV442267.1|AV442267 AV442267 Arabidopsis thaliana above-... 64 2e-007
gb|AV529187.1|AV529187 AV529187 Arabidopsis thaliana aboveg... 64 2e-007
gb|AV553463.1|AV553463 AV553463 Arabidopsis thaliana roots ... 64 2e-007
gb|BE530485.1|BE530485 M77N01STM Arabidopsis developing see... 62 8e-007
gb|AV536569.1|AV536569 AV536569 Arabidopsis thaliana liquid... 60 3e-006
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 60 3e-006
gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, ... 60 3e-006
gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, ... 60 3e-006
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 60 3e-006
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 60 3e-006
ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose sy... 60 3e-006
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 60 3e-006
gb|AV830043.1|AV830043 AV830043 RAFL9 Arabidopsis thaliana ... 58 1e-005
gb|CB261308.1|CB261308 08-E9409-012-002-P13-t7r MPIZ-ADIS-0... 58 1e-005
gb|CD534481.1|CD534481 39I11 Arabidopsis Leaf Senescence Li... 58 1e-005
gb|AV439681.1|AV439681 AV439681 Arabidopsis thaliana above-... 58 1e-005
gb|AV518616.1|AV518616 AV518616 Arabidopsis thaliana aboveg... 58 1e-005
gb|AV523139.1|AV523139 AV523139 Arabidopsis thaliana aboveg... 58 1e-005
gb|AV529432.1|AV529432 AV529432 Arabidopsis thaliana aboveg... 58 1e-005
gb|AV529461.1|AV529461 AV529461 Arabidopsis thaliana aboveg... 58 1e-005
gb|AV550172.1|AV550172 AV550172 Arabidopsis thaliana roots ... 58 1e-005
emb|AJ838254.1| Arabidopsis thaliana T-DNA flanking sequenc... 58 1e-005
ref|NM_128111.2| Arabidopsis thaliana CESA10 (CELLULASE SYN... 58 1e-005
gb|CL484678.1|CL484678 SAIL_400_D01.v1 SAIL Collection Arab... 56 5e-005
gb|N96792.1|N96792 21978 Lambda-PRL1 Arabidopsis thaliana c... 56 5e-005
gb|BE038216.1|BE038216 AA10E02 AA Arabidopsis thaliana cDNA... 56 5e-005
gb|AV812779.1|AV812779 AV812779 RAFL9 Arabidopsis thaliana ... 56 5e-005
gb|AV823492.1|AV823492 AV823492 RAFL5 Arabidopsis thaliana ... 56 5e-005
gb|AV523143.1|AV523143 AV523143 Arabidopsis thaliana aboveg... 56 5e-005
gb|AV523438.1|AV523438 AV523438 Arabidopsis thaliana aboveg... 56 5e-005
gb|AV523533.1|AV523533 AV523533 Arabidopsis thaliana aboveg... 56 5e-005
gb|AV523635.1|AV523635 AV523635 Arabidopsis thaliana aboveg... 56 5e-005
gb|AV529949.1|AV529949 AV529949 Arabidopsis thaliana aboveg... 56 5e-005
gb|AV530046.1|AV530046 AV530046 Arabidopsis thaliana aboveg... 56 5e-005
gb|AV537459.1|AV537459 AV537459 Arabidopsis thaliana roots ... 56 5e-005
gb|AV546043.1|AV546043 AV546043 Arabidopsis thaliana roots ... 56 5e-005
gb|AV546683.1|AV546683 AV546683 Arabidopsis thaliana roots ... 56 5e-005
gb|AV547198.1|AV547198 AV547198 Arabidopsis thaliana roots ... 56 5e-005
gb|AV560817.1|AV560817 AV560817 Arabidopsis thaliana green ... 56 5e-005
gb|BP582979.1|BP582979 BP582979 RAFL14 Arabidopsis thaliana... 56 5e-005
gb|BP587323.1|BP587323 BP587323 RAFL15 Arabidopsis thaliana... 56 5e-005
gb|BP599761.1|BP599761 BP599761 RAFL16 Arabidopsis thaliana... 56 5e-005
gb|BP617268.1|BP617268 BP617268 RAFL16 Arabidopsis thaliana... 56 5e-005
gb|BP660707.1|BP660707 BP660707 RAFL21 Arabidopsis thaliana... 56 5e-005
gb|BP791873.1|BP791873 BP791873 RAFL7 Arabidopsis thaliana ... 56 5e-005
gb|AY136423.1| Arabidopsis thaliana cellulose synthase cata... 56 5e-005
gb|AY045960.1| Arabidopsis thaliana putative cellulose synt... 56 5e-005
gb|BT005743.1| Arabidopsis thaliana clone RAFL15-50-B21 (R5... 56 5e-005
gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complet... 56 5e-005
gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B... 56 5e-005
emb|BX833092.1|CNS0A0FM Arabidopsis thaliana Full-length cD... 56 5e-005
emb|BX833785.1|CNS0A0C4 Arabidopsis thaliana Full-length cD... 56 5e-005
emb|BX821788.1|CNS0A924 Arabidopsis thaliana Full-length cD... 56 5e-005
emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome... 56 5e-005
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 56 5e-005
ref|NM_119980.2| Arabidopsis thaliana ATCSLD4; cellulose sy... 56 5e-005
gb|CW794531.1|CW794531 WiscDsLox364G07 Arabidopsis thaliana... 54 2e-004
gb|CK117572.1|CK117572 215o03.p1 AtM1 Arabidopsis thaliana ... 54 2e-004
gb|CK119314.1|CK119314 204i17.p1 AtM1 Arabidopsis thaliana ... 54 2e-004
emb|BX822015.1|CNS0AAAJ Arabidopsis thaliana Full-length cD... 54 2e-004
emb|BX572207.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 7e-004
gb|AU229295.1|AU229295 AU229295 RAFL16 Arabidopsis thaliana... 52 7e-004
gb|AV822205.1|AV822205 AV822205 RAFL5 Arabidopsis thaliana ... 52 7e-004
gb|AV525753.1|AV525753 AV525753 Arabidopsis thaliana aboveg... 52 7e-004
gb|AV527222.1|AV527222 AV527222 Arabidopsis thaliana aboveg... 52 7e-004
emb|BX829135.1|CNS0A3FB Arabidopsis thaliana Full-length cD... 52 7e-004
dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosom... 52 7e-004
gb|BH865757.1|BH865757 SALK_099805 Arabidopsis thaliana TDN... 50 0.003
emb|AL951915.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 0.003
gb|CW801166.1|CW801166 WiscDsLox293-296invG24 Arabidopsis t... 50 0.003
gb|CW840637.1|CW840637 ET10337.Ds3.06.12.2002.jw43.284 Arab... 50 0.003
gb|AV552509.1|AV552509 AV552509 Arabidopsis thaliana roots ... 50 0.003
gb|B24204.1|B24204 F19F17TF IGF Arabidopsis thaliana genomi... 48 0.012
gb|BH611908.1|BH611908 SALK_031874 Arabidopsis thaliana TDN... 48 0.012
gb|CL497288.1|CL497288 SAIL_639_H07.v1 SAIL Collection Arab... 48 0.012
emb|AL952375.1| Arabidopsis thaliana T-DNA flanking sequenc... 48 0.012
emb|BX546656.1| Arabidopsis thaliana T-DNA flanking sequenc... 48 0.012
gb|T45311.1|T45311 8574 Lambda-PRL2 Arabidopsis thaliana cD... 48 0.012
gb|N96884.1|N96884 21830 Lambda-PRL1 Arabidopsis thaliana c... 48 0.012
gb|W43509.1|W43509 22886 CD4-15 Arabidopsis thaliana cDNA c... 48 0.012
gb|AI994360.1|AI994360 701557762 A. thaliana, Ohio State cl... 48 0.012
gb|AV782896.1|AV782896 AV782896 RAFL5 Arabidopsis thaliana ... 48 0.012
gb|AV784570.1|AV784570 AV784570 RAFL5 Arabidopsis thaliana ... 48 0.012
gb|AB038726.1|AB038726 AB038726 Arabidopsis thaliana Above-... 48 0.012
gb|AV524115.1|AV524115 AV524115 Arabidopsis thaliana aboveg... 48 0.012
gb|AV539120.1|AV539120 AV539120 Arabidopsis thaliana roots ... 48 0.012
gb|AV540720.1|AV540720 AV540720 Arabidopsis thaliana roots ... 48 0.012
gb|AV546832.1|AV546832 AV546832 Arabidopsis thaliana roots ... 48 0.012
gb|AV564362.1|AV564362 AV564362 Arabidopsis thaliana green ... 48 0.012
gb|BP593312.1|BP593312 BP593312 RAFL15 Arabidopsis thaliana... 48 0.012
gb|BP602929.1|BP602929 BP602929 RAFL16 Arabidopsis thaliana... 48 0.012
gb|BP613149.1|BP613149 BP613149 RAFL16 Arabidopsis thaliana... 48 0.012
gb|BP614104.1|BP614104 BP614104 RAFL16 Arabidopsis thaliana... 48 0.012
gb|BP617385.1|BP617385 BP617385 RAFL16 Arabidopsis thaliana... 48 0.012
gb|BP619970.1|BP619970 BP619970 RAFL16 Arabidopsis thaliana... 48 0.012
gb|BP648320.1|BP648320 BP648320 RAFL19 Arabidopsis thaliana... 48 0.012
gb|BP649265.1|BP649265 BP649265 RAFL19 Arabidopsis thaliana... 48 0.012
gb|BP658847.1|BP658847 BP658847 RAFL19 Arabidopsis thaliana... 48 0.012
gb|BP780628.1|BP780628 BP780628 RAFL7 Arabidopsis thaliana ... 48 0.012
gb|BP784043.1|BP784043 BP784043 RAFL7 Arabidopsis thaliana ... 48 0.012
gb|BP790874.1|BP790874 BP790874 RAFL7 Arabidopsis thaliana ... 48 0.012
gb|BP804846.1|BP804846 BP804846 RAFL16 Arabidopsis thaliana... 48 0.012
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 48 0.012
dbj|AK175868.1| Arabidopsis thaliana mRNA for putative cell... 48 0.012
ref|NM_128870.3| Arabidopsis thaliana ATCSLD1; cellulose sy... 48 0.012
gb|AQ955593.1|AQ955593 LERAE88TR LERA Arabidopsis thaliana ... 46 0.046
gb|BH847307.1|BH847307 SALK_052351.56.00.x Arabidopsis thal... 46 0.046
gb|CC887589.1|CC887589 SALK_150405.56.00.x Arabidopsis thal... 46 0.046
gb|T45414.1|T45414 8677 Lambda-PRL2 Arabidopsis thaliana cD... 46 0.046
gb|AI993628.1|AI993628 701496831 A. thaliana, Ohio State cl... 46 0.046
gb|AV829450.1|AV829450 AV829450 RAFL9 Arabidopsis thaliana ... 46 0.046
gb|AV546144.1|AV546144 AV546144 Arabidopsis thaliana roots ... 46 0.046
gb|BP841009.1|BP841009 BP841009 RAFL19 Arabidopsis thaliana... 46 0.046
emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome ... 46 0.046
dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose syn... 46 0.046
ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G1... 46 0.046
ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G1... 46 0.046
ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose sy... 46 0.046
gb|B67810.1|B67810 T24H20TR TAMU Arabidopsis thaliana genom... 44 0.18
gb|CL514190.1|CL514190 SAIL_885_D10.v1 SAIL Collection Arab... 44 0.18
gb|CW843228.1|CW843228 ET13507.Ds3.07.23.2003.jx19.666 Arab... 44 0.18
emb|BX322694.1| Arabidopsis thaliana transposon insertion S... 44 0.18
gb|AC084165.1|AC084165 Arabidopsis thaliana chromosome 1 BA... 44 0.18
ref|NM_102951.1| Arabidopsis thaliana ATCSLD6; cellulose sy... 44 0.18
>gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
mRNA, complete cds
Length = 3771
Score = 182 bits (92), Expect = 3e-043
Identities = 650/836 (77%)
Strand = Plus / Minus
Query: 1747 gcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggc 1806
|||||| ||||||| || ||||| | ||| || ||||| || || || ||||| || ||
Sbjct: 2159 gcatcaaaaccataaagagcctgtcttctaaacacacaacctgtcccgacatatatcggt 2100
Query: 1807 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagca 1866
||||| || ||||| | |||||||||||| |||||||| || |||||||| | ||| |
Sbjct: 2099 ccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggtttgag 2040
Query: 1867 tatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttc 1926
|||| |||||| | ||||| ||| |||| ||||| || ||||| ||||| || ||||||
Sbjct: 2039 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 1980
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| ||| || ||||||||||||||||||| ||| | || || ||||| ||||||
Sbjct: 1979 tttcccgattgcgggtccatcatgaaacacatagattctctaattgctttgctgttgttg 1920
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagaca 2046
|||||||||||||| || | || | ||||| | ||| ||||||| |||||||||||
Sbjct: 1919 atgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcagagact 1860
Query: 2047 cggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttct 2106
|||| || | |||||| || ||||| |||||||| || | | | || |||| ||| ||
Sbjct: 1859 cggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgcttctca 1800
Query: 2107 ctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttgg 2166
| || ||||| || || || || |||||||| || ||| ||||||| | ||||| ||
Sbjct: 1799 cgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccactatga 1740
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|| | ||| |||||||||||||||||||| || || ||||||||||||||||| || ||
Sbjct: 1739 cccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagtt 1680
Query: 2227 ccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattg 2286
||||||||||| ||||| ||||||||||| || || || || | ||||||| |||||
Sbjct: 1679 ccatcttgcatagtccaaccttcctcaggcactttctgtgcagtagcaaccagtgcattt 1620
Query: 2287 atccttaccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaa 2346
||| | || || || ||||| || ||||||||||| || | | ||||| ||||| | |
Sbjct: 1619 atcttcactttaaactcctcataatctctcttcatagcacgacgttccctgacaaaagca 1560
Query: 2347 gcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacga 2406
| | ||| |||| |||||||| || |||||||| || |||||||||||||| ||
Sbjct: 1559 ggatgaactttgttcttcaggtaatccatcttctgagaaaaataccactcaggagctcgt 1500
Query: 2407 ggctcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttca 2466
||||||||||||||||| || | |||||||||||||| | ||||| |||| ||| |||
Sbjct: 1499 ggctcgatattaaacttcttacaaaaaggaacccattttctagcaaactcagctgtatca 1440
Query: 2467 gacaatgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttc 2526
|| | |||||||| |||||||| || |||||||| || || ||||| || | |||||
Sbjct: 1439 gagagagcttcaaatgtaagcatagctgcaccatcgtctgatacataacacgcaacctta 1380
Query: 2527 tcaaccggataatccacagaaaggatggaaaggacagtgttcgctgtgaccaaggg 2582
|| || |||||||| || | || |||||||| || ||||| ||||| | ||||||
Sbjct: 1379 tccacaggataatcaactgctagaatggaaagaactgtgtttgctgtaatcaaggg 1324
Score = 93.7 bits (47), Expect = 2e-016
Identities = 188/235 (80%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 2725 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 2666
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 2665 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 2606
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 2605 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 2546
Query: 1343 tccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||| || |||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 2545 tccacccgatctcttttccccattcggttttatcttcgtacccgcagctaataac 2491
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 3020 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 2977
>emb|AX505864.1| Sequence 559 from Patent WO0216655
Length = 3255
Score = 182 bits (92), Expect = 3e-043
Identities = 650/836 (77%)
Strand = Plus / Minus
Query: 1747 gcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggc 1806
|||||| ||||||| || ||||| | ||| || ||||| || || || ||||| || ||
Sbjct: 1943 gcatcaaaaccataaagagcctgtcttctaaacacacaacctgtcccgacatatatcggt 1884
Query: 1807 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagca 1866
||||| || ||||| | |||||||||||| |||||||| || |||||||| | ||| |
Sbjct: 1883 ccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggtttgag 1824
Query: 1867 tatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttc 1926
|||| |||||| | ||||| ||| |||| ||||| || ||||| ||||| || ||||||
Sbjct: 1823 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 1764
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| ||| || ||||||||||||||||||| ||| | || || ||||| ||||||
Sbjct: 1763 tttcccgattgcgggtccatcatgaaacacatagattctctaattgctttgctgttgttg 1704
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagaca 2046
|||||||||||||| || | || | ||||| | ||| ||||||| |||||||||||
Sbjct: 1703 atgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcagagact 1644
Query: 2047 cggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttct 2106
|||| || | |||||| || ||||| |||||||| || | | | || |||| ||| ||
Sbjct: 1643 cggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgcttctca 1584
Query: 2107 ctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttgg 2166
| || ||||| || || || || |||||||| || ||| ||||||| | ||||| ||
Sbjct: 1583 cgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccactatga 1524
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|| | ||| |||||||||||||||||||| || || ||||||||||||||||| || ||
Sbjct: 1523 cccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagtt 1464
Query: 2227 ccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattg 2286
||||||||||| ||||| ||||||||||| || || || || | ||||||| |||||
Sbjct: 1463 ccatcttgcatagtccaaccttcctcaggcactttctgtgcagtagcaaccagtgcattt 1404
Query: 2287 atccttaccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaa 2346
||| | || || || ||||| || ||||||||||| || | | ||||| ||||| | |
Sbjct: 1403 atcttcactttaaactcctcataatctctcttcatagcacgacgttccctgacaaaagca 1344
Query: 2347 gcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacga 2406
| | ||| |||| |||||||| || |||||||| || |||||||||||||| ||
Sbjct: 1343 ggatgaactttgttcttcaggtaatccatcttctgagaaaaataccactcaggagctcgt 1284
Query: 2407 ggctcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttca 2466
||||||||||||||||| || | |||||||||||||| | ||||| |||| ||| |||
Sbjct: 1283 ggctcgatattaaacttcttacaaaaaggaacccattttctagcaaactcagctgtatca 1224
Query: 2467 gacaatgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttc 2526
|| | |||||||| |||||||| || |||||||| || || ||||| || | |||||
Sbjct: 1223 gagagagcttcaaatgtaagcatagctgcaccatcgtctgatacataacacgcaacctta 1164
Query: 2527 tcaaccggataatccacagaaaggatggaaaggacagtgttcgctgtgaccaaggg 2582
|| || |||||||| || | || |||||||| || ||||| ||||| | ||||||
Sbjct: 1163 tccacaggataatcaactgctagaatggaaagaactgtgtttgctgtaatcaaggg 1108
Score = 93.7 bits (47), Expect = 2e-016
Identities = 188/235 (80%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 2509 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 2450
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 2449 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 2390
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 2389 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 2330
Query: 1343 tccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||| || |||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 2329 tccacccgatctcttttccccattcggttttatcttcgtacccgcagctaataac 2275
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 2804 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 2761
>ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synthase/ transferase,
transferring glycosyl groups AT4G39350 (CESA2) mRNA,
complete cds
Length = 3726
Score = 182 bits (92), Expect = 3e-043
Identities = 650/836 (77%)
Strand = Plus / Minus
Query: 1747 gcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggc 1806
|||||| ||||||| || ||||| | ||| || ||||| || || || ||||| || ||
Sbjct: 2112 gcatcaaaaccataaagagcctgtcttctaaacacacaacctgtcccgacatatatcggt 2053
Query: 1807 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagca 1866
||||| || ||||| | |||||||||||| |||||||| || |||||||| | ||| |
Sbjct: 2052 ccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggtttgag 1993
Query: 1867 tatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttc 1926
|||| |||||| | ||||| ||| |||| ||||| || ||||| ||||| || ||||||
Sbjct: 1992 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 1933
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| ||| || ||||||||||||||||||| ||| | || || ||||| ||||||
Sbjct: 1932 tttcccgattgcgggtccatcatgaaacacatagattctctaattgctttgctgttgttg 1873
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagaca 2046
|||||||||||||| || | || | ||||| | ||| ||||||| |||||||||||
Sbjct: 1872 atgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcagagact 1813
Query: 2047 cggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttct 2106
|||| || | |||||| || ||||| |||||||| || | | | || |||| ||| ||
Sbjct: 1812 cggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgcttctca 1753
Query: 2107 ctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttgg 2166
| || ||||| || || || || |||||||| || ||| ||||||| | ||||| ||
Sbjct: 1752 cgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccactatga 1693
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|| | ||| |||||||||||||||||||| || || ||||||||||||||||| || ||
Sbjct: 1692 cccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagtt 1633
Query: 2227 ccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattg 2286
||||||||||| ||||| ||||||||||| || || || || | ||||||| |||||
Sbjct: 1632 ccatcttgcatagtccaaccttcctcaggcactttctgtgcagtagcaaccagtgcattt 1573
Query: 2287 atccttaccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaa 2346
||| | || || || ||||| || ||||||||||| || | | ||||| ||||| | |
Sbjct: 1572 atcttcactttaaactcctcataatctctcttcatagcacgacgttccctgacaaaagca 1513
Query: 2347 gcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacga 2406
| | ||| |||| |||||||| || |||||||| || |||||||||||||| ||
Sbjct: 1512 ggatgaactttgttcttcaggtaatccatcttctgagaaaaataccactcaggagctcgt 1453
Query: 2407 ggctcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttca 2466
||||||||||||||||| || | |||||||||||||| | ||||| |||| ||| |||
Sbjct: 1452 ggctcgatattaaacttcttacaaaaaggaacccattttctagcaaactcagctgtatca 1393
Query: 2467 gacaatgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttc 2526
|| | |||||||| |||||||| || |||||||| || || ||||| || | |||||
Sbjct: 1392 gagagagcttcaaatgtaagcatagctgcaccatcgtctgatacataacacgcaacctta 1333
Query: 2527 tcaaccggataatccacagaaaggatggaaaggacagtgttcgctgtgaccaaggg 2582
|| || |||||||| || | || |||||||| || ||||| ||||| | ||||||
Sbjct: 1332 tccacaggataatcaactgctagaatggaaagaactgtgtttgctgtaatcaaggg 1277
Score = 93.7 bits (47), Expect = 2e-016
Identities = 188/235 (80%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 2678 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 2619
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 2618 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 2559
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 2558 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 2499
Query: 1343 tccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||| || |||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 2498 tccacccgatctcttttccccattcggttttatcttcgtacccgcagctaataac 2444
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 2973 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 2930
>gb|AI992761.1|AI992761 701493456 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA
clone 701493456, mRNA sequence
Length = 511
Score = 129 bits (65), Expect = 4e-027
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 305 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 246
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctctttt 1359
||||| ||||| ||||| |||||||||||||| || ||||| ||||| || | ||| ||
Sbjct: 245 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacccagctcagtt 186
Query: 1360 ccccagtcggtcttgtcttcgtagccgcagctgataacatg 1400
||||| || ||||||||||| || |||||||| || |||||
Sbjct: 185 ccccactcagtcttgtcttcataaccgcagcttatgacatg 145
>gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
mRNA, complete cds
Length = 3081
Score = 129 bits (65), Expect = 4e-027
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 2258 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 2199
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctctttt 1359
||||| ||||| ||||| |||||||||||||| || ||||| ||||| || | ||| ||
Sbjct: 2198 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacccagctcagtt 2139
Query: 1360 ccccagtcggtcttgtcttcgtagccgcagctgataacatg 1400
||||| || ||||||||||| || |||||||| || |||||
Sbjct: 2138 ccccactcagtcttgtcttcataaccgcagcttatgacatg 2098
Score = 107 bits (54), Expect = 1e-020
Identities = 210/262 (80%)
Strand = Plus / Minus
Query: 1750 tcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggccct 1809
||||||||||| || || || ||| |||||||||| |||||||| || |||| || |||
Sbjct: 1823 tcataaccatacagagcttgtcgtttgaaaacacaaccagtaccaacgtaaactggacct 1764
Query: 1810 tgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatat 1869
|| || ||||| | ||||||||| ||||||||||| ||||| ||| ||||| || ||
Sbjct: 1763 tggattccatctagacctttcatattgatatcaaagaagactgtgtttctgttggcgtaa 1704
Query: 1870 cgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttc 1929
||||| | |||||| ||| ||||||| ||||||||||| |||||||| || |||||
Sbjct: 1703 cgatcgtttgtgtcaatgccatcaaacctttgagggaactgaacatagcagaccttcttt 1644
Query: 1930 cccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatg 1989
|| | | ||||||||||| |||||||| || || | | ||||||||| ||||| |
Sbjct: 1643 ccaatctgaggatccatcaaaaaacacattgcttccctcacggccttgctgttgtttaca 1584
Query: 1990 tagtgatcacagtccaagttca 2011
||||||||||||||||||||||
Sbjct: 1583 tagtgatcacagtccaagttca 1562
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 2706 ccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacaga 2765
|||||| |||||||||||||||||||| || | || ||||||||||||||||| |||||
Sbjct: 867 ccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacaga 808
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 2284 ttgatccttaccttgaattcctcgtattctctcttcat 2321
|||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1289 ttgatcctgaccttgaactcctcatattctctcttcat 1252
Score = 52.0 bits (26), Expect = 7e-004
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 2434 ggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgca 2493
||||||||||| ||||||| |||| ||||| || | | ||| || |||||||||| |
Sbjct: 1139 ggaacccattttcttgcaaactcagcagtttccgagagagattcgaatgtaagcattgaa 1080
Query: 2494 gcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||| || ||||| ||||||||||||| ||||||||
Sbjct: 1079 gcaccgtcgtcagagacatagcaggagattttctcaac 1042
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccacca 902
||||| ||||||||||| |||||||| ||||||||
Sbjct: 2633 cctccaatgacccagaattgctcgtttctccacca 2599
>dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3828
Score = 129 bits (65), Expect = 4e-027
Identities = 353/449 (78%)
Strand = Plus / Minus
Query: 1807 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagca 1866
||||| || ||||| | |||||||||||| |||||||| || |||||||| | ||| |
Sbjct: 2121 ccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggtttgag 2062
Query: 1867 tatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttc 1926
|||| |||||| | ||||| ||| |||| ||||| || ||||| ||||| || ||||||
Sbjct: 2061 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 2002
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| ||| || ||||||||||||||||||| ||| | || || ||||| ||||||
Sbjct: 2001 tttcccgattgcgggtccatcatgaaacacatagattctctaattgctttgctgttgttg 1942
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagaca 2046
|||||||||||||| || | || | ||||| | ||| ||||||| |||||||||||
Sbjct: 1941 atgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcagagact 1882
Query: 2047 cggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttct 2106
|||| || | |||||| || ||||| |||||||| || | | | || |||| ||| ||
Sbjct: 1881 cggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgcttctca 1822
Query: 2107 ctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttgg 2166
| || ||||| || || || || |||||||| || ||| ||||||| | ||||| ||
Sbjct: 1821 cgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccactatga 1762
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|| | ||| |||||||||||||||||||| || || ||||||||||||||||| || ||
Sbjct: 1761 cccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagtt 1702
Query: 2227 ccatcttgcattgtccatccttcctcagg 2255
||||||||||| ||||| | |||||||||
Sbjct: 1701 ccatcttgcatagtccaacgttcctcagg 1673
Score = 85.7 bits (43), Expect = 5e-014
Identities = 187/235 (79%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 2747 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 2688
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 2687 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 2628
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 2627 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 2568
Query: 1343 tccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||| || |||||||||||||| ||||| || |||| ||| |||||||| |||||
Sbjct: 2567 tccacccgatctcttttccccattcggttttatcttggtacccgcagctaataac 2513
Score = 79.8 bits (40), Expect = 3e-012
Identities = 94/112 (83%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
|||||||||||||| || ||||||||||||||||| || | |||||||||||||| |
Sbjct: 1539 taccactcaggagctcgtggctcgatattaaacttcttacaaaaaggaacccattttgta 1480
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccat 2500
||||| |||| ||| ||||| | |||||||| |||||||| || |||||||
Sbjct: 1479 gcaaaatcagctgtatcagagagagcttcaaatgtaagcatagctgcaccat 1428
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 3042 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 2999
>gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA, complete cds
Length = 3355
Score = 129 bits (65), Expect = 4e-027
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 2303 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 2244
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctctttt 1359
||||| ||||| ||||| |||||||||||||| || ||||| ||||| || | ||| ||
Sbjct: 2243 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacccagctcagtt 2184
Query: 1360 ccccagtcggtcttgtcttcgtagccgcagctgataacatg 1400
||||| || ||||||||||| || |||||||| || |||||
Sbjct: 2183 ccccactcagtcttgtcttcataaccgcagcttatgacatg 2143
Score = 107 bits (54), Expect = 1e-020
Identities = 210/262 (80%)
Strand = Plus / Minus
Query: 1750 tcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggccct 1809
||||||||||| || || || ||| |||||||||| |||||||| || |||| || |||
Sbjct: 1868 tcataaccatacagagcttgtcgtttgaaaacacaaccagtaccaacgtaaactggacct 1809
Query: 1810 tgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatat 1869
|| || ||||| | ||||||||| ||||||||||| ||||| ||| ||||| || ||
Sbjct: 1808 tggattccatctagacctttcatattgatatcaaagaagactgtgtttctgttggcgtaa 1749
Query: 1870 cgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttc 1929
||||| | |||||| ||| ||||||| ||||||||||| |||||||| || |||||
Sbjct: 1748 cgatcgtttgtgtcaatgccatcaaacctttgagggaactgaacatagcagaccttcttt 1689
Query: 1930 cccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatg 1989
|| | | ||||||||||| |||||||| || || | | ||||||||| ||||| |
Sbjct: 1688 ccaatctgaggatccatcaaaaaacacattgcttccctcacggccttgctgttgtttaca 1629
Query: 1990 tagtgatcacagtccaagttca 2011
||||||||||||||||||||||
Sbjct: 1628 tagtgatcacagtccaagttca 1607
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 2706 ccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacaga 2765
|||||| |||||||||||||||||||| || | || ||||||||||||||||| |||||
Sbjct: 912 ccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacaga 853
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 2284 ttgatccttaccttgaattcctcgtattctctcttcat 2321
|||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1334 ttgatcctgaccttgaactcctcatattctctcttcat 1297
Score = 52.0 bits (26), Expect = 7e-004
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 2434 ggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgca 2493
||||||||||| ||||||| |||| ||||| || | | ||| || |||||||||| |
Sbjct: 1184 ggaacccattttcttgcaaactcagcagtttccgagagagattcgaatgtaagcattgaa 1125
Query: 2494 gcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||| || ||||| ||||||||||||| ||||||||
Sbjct: 1124 gcaccgtcgtcagagacatagcaggagattttctcaac 1087
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccacca 902
||||| ||||||||||| |||||||| ||||||||
Sbjct: 2678 cctccaatgacccagaattgctcgtttctccacca 2644
>emb|AX030944.1| Sequence 7 from Patent WO9800549
Length = 3828
Score = 129 bits (65), Expect = 4e-027
Identities = 353/449 (78%)
Strand = Plus / Minus
Query: 1807 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagca 1866
||||| || ||||| | |||||||||||| |||||||| || |||||||| | ||| |
Sbjct: 2121 ccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggtttgag 2062
Query: 1867 tatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttc 1926
|||| |||||| | ||||| ||| |||| ||||| || ||||| ||||| || ||||||
Sbjct: 2061 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 2002
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| ||| || ||||||||||||||||||| ||| | || || ||||| ||||||
Sbjct: 2001 tttcccgattgcgggtccatcatgaaacacatagattctctaattgctttgctgttgttg 1942
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagaca 2046
|||||||||||||| || | || | ||||| | ||| ||||||| |||||||||||
Sbjct: 1941 atgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcagagact 1882
Query: 2047 cggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttct 2106
|||| || | |||||| || ||||| |||||||| || | | | || |||| ||| ||
Sbjct: 1881 cggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgcttctca 1822
Query: 2107 ctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttgg 2166
| || ||||| || || || || |||||||| || ||| ||||||| | ||||| ||
Sbjct: 1821 cgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccactatga 1762
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|| | ||| |||||||||||||||||||| || || ||||||||||||||||| || ||
Sbjct: 1761 cccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagtt 1702
Query: 2227 ccatcttgcattgtccatccttcctcagg 2255
||||||||||| ||||| | |||||||||
Sbjct: 1701 ccatcttgcatagtccaacgttcctcagg 1673
Score = 85.7 bits (43), Expect = 5e-014
Identities = 187/235 (79%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 2747 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 2688
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 2687 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 2628
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 2627 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 2568
Query: 1343 tccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||| || |||||||||||||| ||||| || |||| ||| |||||||| |||||
Sbjct: 2567 tccacccgatctcttttccccattcggttttatcttggtacccgcagctaataac 2513
Score = 79.8 bits (40), Expect = 3e-012
Identities = 94/112 (83%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
|||||||||||||| || ||||||||||||||||| || | |||||||||||||| |
Sbjct: 1539 taccactcaggagctcgtggctcgatattaaacttcttacaaaaaggaacccattttgta 1480
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccat 2500
||||| |||| ||| ||||| | |||||||| |||||||| || |||||||
Sbjct: 1479 gcaaaatcagctgtatcagagagagcttcaaatgtaagcatagctgcaccat 1428
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 3042 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 2999
>gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene, complete cds
Length = 3081
Score = 129 bits (65), Expect = 4e-027
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 2258 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 2199
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctctttt 1359
||||| ||||| ||||| |||||||||||||| || ||||| ||||| || | ||| ||
Sbjct: 2198 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacccagctcagtt 2139
Query: 1360 ccccagtcggtcttgtcttcgtagccgcagctgataacatg 1400
||||| || ||||||||||| || |||||||| || |||||
Sbjct: 2138 ccccactcagtcttgtcttcataaccgcagcttatgacatg 2098
Score = 107 bits (54), Expect = 1e-020
Identities = 210/262 (80%)
Strand = Plus / Minus
Query: 1750 tcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggccct 1809
||||||||||| || || || ||| |||||||||| |||||||| || |||| || |||
Sbjct: 1823 tcataaccatacagagcttgtcgtttgaaaacacaaccagtaccaacgtaaactggacct 1764
Query: 1810 tgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatat 1869
|| || ||||| | ||||||||| ||||||||||| ||||| ||| ||||| || ||
Sbjct: 1763 tggattccatctagacctttcatattgatatcaaagaagactgtgtttctgttggcgtaa 1704
Query: 1870 cgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttc 1929
||||| | |||||| ||| ||||||| ||||||||||| |||||||| || |||||
Sbjct: 1703 cgatcgtttgtgtcaatgccatcaaacctttgagggaactgaacatagcagaccttcttt 1644
Query: 1930 cccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatg 1989
|| | | ||||||||||| |||||||| || || | | ||||||||| ||||| |
Sbjct: 1643 ccaatctgaggatccatcaaaaaacacattgcttccctcacggccttgctgttgtttaca 1584
Query: 1990 tagtgatcacagtccaagttca 2011
||||||||||||||||||||||
Sbjct: 1583 tagtgatcacagtccaagttca 1562
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 2706 ccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacaga 2765
|||||| |||||||||||||||||||| || | || ||||||||||||||||| |||||
Sbjct: 867 ccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacaga 808
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 2284 ttgatccttaccttgaattcctcgtattctctcttcat 2321
|||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1289 ttgatcctgaccttgaactcctcatattctctcttcat 1252
Score = 52.0 bits (26), Expect = 7e-004
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 2434 ggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgca 2493
||||||||||| ||||||| |||| ||||| || | | ||| || |||||||||| |
Sbjct: 1139 ggaacccattttcttgcaaactcagcagtttccgagagagattcgaatgtaagcattgaa 1080
Query: 2494 gcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||| || ||||| ||||||||||||| ||||||||
Sbjct: 1079 gcaccgtcgtcagagacatagcaggagattttctcaac 1042
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccacca 902
||||| ||||||||||| |||||||| ||||||||
Sbjct: 2633 cctccaatgacccagaattgctcgtttctccacca 2599
>ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM 3); cellulose synthase
AT5G17420 (IRX3) mRNA, complete cds
Length = 3693
Score = 129 bits (65), Expect = 4e-027
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 2303 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 2244
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctctttt 1359
||||| ||||| ||||| |||||||||||||| || ||||| ||||| || | ||| ||
Sbjct: 2243 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacccagctcagtt 2184
Query: 1360 ccccagtcggtcttgtcttcgtagccgcagctgataacatg 1400
||||| || ||||||||||| || |||||||| || |||||
Sbjct: 2183 ccccactcagtcttgtcttcataaccgcagcttatgacatg 2143
Score = 107 bits (54), Expect = 1e-020
Identities = 210/262 (80%)
Strand = Plus / Minus
Query: 1750 tcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggccct 1809
||||||||||| || || || ||| |||||||||| |||||||| || |||| || |||
Sbjct: 1868 tcataaccatacagagcttgtcgtttgaaaacacaaccagtaccaacgtaaactggacct 1809
Query: 1810 tgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatat 1869
|| || ||||| | ||||||||| ||||||||||| ||||| ||| ||||| || ||
Sbjct: 1808 tggattccatctagacctttcatattgatatcaaagaagactgtgtttctgttggcgtaa 1749
Query: 1870 cgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttc 1929
||||| | |||||| ||| ||||||| ||||||||||| |||||||| || |||||
Sbjct: 1748 cgatcgtttgtgtcaatgccatcaaacctttgagggaactgaacatagcagaccttcttt 1689
Query: 1930 cccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatg 1989
|| | | ||||||||||| |||||||| || || | | ||||||||| ||||| |
Sbjct: 1688 ccaatctgaggatccatcaaaaaacacattgcttccctcacggccttgctgttgtttaca 1629
Query: 1990 tagtgatcacagtccaagttca 2011
||||||||||||||||||||||
Sbjct: 1628 tagtgatcacagtccaagttca 1607
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 2706 ccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacaga 2765
|||||| |||||||||||||||||||| || | || ||||||||||||||||| |||||
Sbjct: 912 ccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacaga 853
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 2284 ttgatccttaccttgaattcctcgtattctctcttcat 2321
|||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1334 ttgatcctgaccttgaactcctcatattctctcttcat 1297
Score = 52.0 bits (26), Expect = 7e-004
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 2434 ggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgca 2493
||||||||||| ||||||| |||| ||||| || | | ||| || |||||||||| |
Sbjct: 1184 ggaacccattttcttgcaaactcagcagtttccgagagagattcgaatgtaagcattgaa 1125
Query: 2494 gcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||| || ||||| ||||||||||||| ||||||||
Sbjct: 1124 gcaccgtcgtcagagacatagcaggagattttctcaac 1087
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccacca 902
||||| ||||||||||| |||||||| ||||||||
Sbjct: 2678 cctccaatgacccagaattgctcgtttctccacca 2644
>ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNTHASE 9); transferase,
transferring glycosyl groups AT2G21770 (CESA9) mRNA,
complete cds
Length = 3308
Score = 121 bits (61), Expect = 1e-024
Identities = 208/257 (80%)
Strand = Plus / Minus
Query: 1141 ccgtaccaaagtgggcagtgcttgctgaagaaaatttcgacagacccaagggcccagcga 1200
|||||||||| ||||| ||| | || |||||||| |||||||| ||||| ||||| ||
Sbjct: 2543 ccgtaccaaatagggcaatgcctactcaagaaaatctcgacagagccaagtgcccaacgt 2484
Query: 1201 aggacctggtgaagacggtcggaaaggttcagaggcgcagaacctttgaatgcaggccgc 1260
|| || || |||||||| || || | ||| | || |||||||||||||| || | |||
Sbjct: 2483 agaacttgatgaagacgatccgacaagttaatgggagcagaacctttgaaagccgctcgc 2424
Query: 1261 ttcgggatgcagtaaatagaccgccagccatggcagtgcatcttaaatccagtcaagata 1320
|| || || || || | ||| | ||| |||||||| |||||||| || || || ||||||
Sbjct: 2423 tttggcatacaatatacagatctccatccatggcaatgcatcttgaaacccgttaagata 2364
Query: 1321 tcctctgtgatcgatccataaatccagccaatctcttttccccagtcggtcttgtcttcg 1380
||||| |||| ||| ||||||||||| ||||||||||||||||| ||||| || ||||||
Sbjct: 2363 tcctcagtgaccgagccataaatccacccaatctcttttccccattcggttttctcttcg 2304
Query: 1381 tagccgcagctgataac 1397
||||| ||||| |||||
Sbjct: 2303 tagccacagctaataac 2287
Score = 111 bits (56), Expect = 9e-022
Identities = 263/332 (79%)
Strand = Plus / Minus
Query: 1747 gcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggc 1806
|||||| | ||||| ||||| |||| |||||| ||||| || || |||||||| || ||
Sbjct: 1958 gcatcaaatccataaagtgcttgccttctgaagacacacccggtccccacatatatcggt 1899
Query: 1807 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagca 1866
||||| || ||||| |||||||||||||||||||| || || || || || | || |
Sbjct: 1898 ccttgtatgccatctaaacctttcatgttgatatcgaagaaaaccacattgcgatttgag 1839
Query: 1867 tatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttc 1926
|||||||| || | ||||| ||| ||||||||||||| ||||| ||||| || | ||||
Sbjct: 1838 tatcgatcgtgtctatcaatcccatcaaacctctgaggaaactgaacataacatattttc 1779
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||| | || |||||||| ||||||
Sbjct: 1778 tttccggactgcgggtccatcatgaaacacatagcttctctaattgccttgctgttgttg 1719
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagaca 2046
||||| ||||||||||||| || | ||||| | ||||||||| | |||||||| ||
Sbjct: 1718 atgtaatgatcacagtccacattaagaaggtaaggagcatttgagagaacagcagatacc 1659
Query: 2047 cggaccagtgcattcatggcaccagccttctt 2078
|||| || | |||||| || |||||||||||
Sbjct: 1658 cggatcaaggaattcatagctccagccttctt 1627
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 2125 cgaggcaactcatttccttccacatcacgaccaccactttggccaaggaatacctgaatc 2184
||||| ||||||||||| |||| ||||| | | || || || || ||||| |||||||||
Sbjct: 1580 cgaggtaactcatttccatccatatcacaaactccgctgtgtcccaggaaaacctgaatc 1521
Query: 2185 attccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttgcattgtccat 2244
||||| ||||| || || || |||||||||||||| || ||||||||||||| |||||
Sbjct: 1520 attcctggatggtcccggacattgtttccaggccaaggagttccatcttgcatagtccaa 1461
Query: 2245 ccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttaccttgaattcc 2304
|| || |||||||| || || | | | |||||| ||||| ||| |||| |||||||||
Sbjct: 1460 ccatcttcaggaactttctgtgatacagaaaccaatgcatttatctttactttgaattcc 1401
Query: 2305 tcgtattctctcttcat 2321
|| || |||||||||||
Sbjct: 1400 tcatagtctctcttcat 1384
Score = 97.6 bits (49), Expect = 1e-017
Identities = 130/157 (82%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
||||| |||||||| || |||||||| | ||||| || | ||||||||||||||| ||
Sbjct: 1316 taccattcaggagcgcgtggctcgatgctgaacttcttacagaaaggaacccattttctt 1257
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaa 2508
||||| || | ||| | ||| | |||||||| ||||||||||||||||||||||| ||
Sbjct: 1256 gcaaactcggctgtgtaagagagagcttcaaatgtaagcattgcagcaccatcatctgat 1197
Query: 2509 acatagcaggagaccttctcaaccggataatccacag 2545
||||| || | |||||||||||||||||||| ||||
Sbjct: 1196 acataacatgcaaccttctcaaccggataatcaacag 1160
Score = 50.1 bits (25), Expect = 0.003
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 2689 tctctctcgattggaagccactttgggaactgatcaagaatccaggaca 2737
||||| ||||| ||| ||| ||||||||||||||||||||||| ||||
Sbjct: 1016 tctctttcgatgggataccattttgggaactgatcaagaatccaagaca 968
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
||||| |||||||| ||||||||||| |||||||| || |||||
Sbjct: 2816 cctccaatgacccaaaactgctcgtttctccaccaatcatcgat 2773
>dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3603
Score = 115 bits (58), Expect = 6e-023
Identities = 403/510 (79%), Gaps = 6/510 (1%)
Strand = Plus / Minus
Query: 1749 atcataaccatatagtgcctgccgtctgaaaaca-catccagtacccacataaatgggcc 1807
|||||| |||||||| ||||||| | | |||||| || |||||||||||||| | || |
Sbjct: 1935 atcatacccatatagagcctgcc-tattaaaacaacaaccagtacccacatatactggac 1877
Query: 1808 cttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcat 1867
| || ||||||||||| || |||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 1876 cctggataccatccaaccccttcatgttaatatcgaaaaagactatattcctgttggcat 1817
Query: 1868 atcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagca-cactttc 1926
||||||| || |||||||| |||| | ||||||||||| |||||||| ||||| |
Sbjct: 1816 atcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatagcagcactt-c 1758
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 1757 tttccaatagccgggtccatcatgaaacacatagcttctttaatagccttactgttatta 1698
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataag-acagcagagac 2045
| ||| |||||||| |||| |||||| || ||||| || ||| |||| |||||||| ||
Sbjct: 1697 aagtaatgatcacaatccacgttcaaaagatatgctcca-ttggtaagaacagcagatac 1639
Query: 2046 acggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttc 2105
||||| || ||||||||| || |||||||| ||||| || | | | || |||| ||||||
Sbjct: 1638 acggatcaatgcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttc 1579
Query: 2106 tctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttg 2165
| || ||||| | || | ||||| ||||||||| || ||| |||| ||||| ||
Sbjct: 1578 acgagaaacatagatgagtctaggcagctcatttccatcggtatccagacccccactatg 1519
Query: 2166 gccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggct 2225
||| | ||| ||||| ||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 1518 gcctaagaacacctgtatcattccaggatgatctctagtgttgttaccaggccagggagt 1459
Query: 2226 tccatcttgcattgtccatccttcctcagg 2255
||||| ||||||||||| ||||| |||||
Sbjct: 1458 accatcctgcattgtccagccttcttcagg 1429
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 2324 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 2265
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 2264 acatgaatagcctccttcagaagag 2240
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 3165 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 3106
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 3105 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 3046
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 3045 gagcttcccgaaaagcggaccccacgact 3017
Score = 65.9 bits (33), Expect = 5e-008
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 2437 acccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagca 2496
||||||||||||||||| |||| |||||||| | | |||||| |||||||| || | |
Sbjct: 1247 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1188
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaaag 2549
|||||||| |||||||| |||| || || || ||||| || |||||||||||
Sbjct: 1187 ccatcatctgaaacataacaggctactttatctaccgggtagtccacagaaag 1135
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 2786 atgacccagaactgctcgttcctccacca 2758
>emb|AX030942.1| Sequence 5 from Patent WO9800549
Length = 3603
Score = 115 bits (58), Expect = 6e-023
Identities = 403/510 (79%), Gaps = 6/510 (1%)
Strand = Plus / Minus
Query: 1749 atcataaccatatagtgcctgccgtctgaaaaca-catccagtacccacataaatgggcc 1807
|||||| |||||||| ||||||| | | |||||| || |||||||||||||| | || |
Sbjct: 1935 atcatacccatatagagcctgcc-tattaaaacaacaaccagtacccacatatactggac 1877
Query: 1808 cttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcat 1867
| || ||||||||||| || |||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 1876 cctggataccatccaaccccttcatgttaatatcgaaaaagactatattcctgttggcat 1817
Query: 1868 atcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagca-cactttc 1926
||||||| || |||||||| |||| | ||||||||||| |||||||| ||||| |
Sbjct: 1816 atcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatagcagcactt-c 1758
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 1757 tttccaatagccgggtccatcatgaaacacatagcttctttaatagccttactgttatta 1698
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataag-acagcagagac 2045
| ||| |||||||| |||| |||||| || ||||| || ||| |||| |||||||| ||
Sbjct: 1697 aagtaatgatcacaatccacgttcaaaagatatgctcca-ttggtaagaacagcagatac 1639
Query: 2046 acggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttc 2105
||||| || ||||||||| || |||||||| ||||| || | | | || |||| ||||||
Sbjct: 1638 acggatcaatgcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttc 1579
Query: 2106 tctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttg 2165
| || ||||| | || | ||||| ||||||||| || ||| |||| ||||| ||
Sbjct: 1578 acgagaaacatagatgagtctaggcagctcatttccatcggtatccagacccccactatg 1519
Query: 2166 gccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggct 2225
||| | ||| ||||| ||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 1518 gcctaagaacacctgtatcattccaggatgatctctagtgttgttaccaggccagggagt 1459
Query: 2226 tccatcttgcattgtccatccttcctcagg 2255
||||| ||||||||||| ||||| |||||
Sbjct: 1458 accatcctgcattgtccagccttcttcagg 1429
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 2324 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 2265
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 2264 acatgaatagcctccttcagaagag 2240
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 3165 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 3106
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 3105 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 3046
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 3045 gagcttcccgaaaagcggaccccacgact 3017
Score = 65.9 bits (33), Expect = 5e-008
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 2437 acccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagca 2496
||||||||||||||||| |||| |||||||| | | |||||| |||||||| || | |
Sbjct: 1247 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1188
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaaag 2549
|||||||| |||||||| |||| || || || ||||| || |||||||||||
Sbjct: 1187 ccatcatctgaaacataacaggctactttatctaccgggtagtccacagaaag 1135
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 2786 atgacccagaactgctcgttcctccacca 2758
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose
synthase catalytic subunit (RSW1) (At4g32410) mRNA,
complete cds
Length = 3763
Score = 115 bits (58), Expect = 6e-023
Identities = 403/510 (79%), Gaps = 6/510 (1%)
Strand = Plus / Minus
Query: 1749 atcataaccatatagtgcctgccgtctgaaaaca-catccagtacccacataaatgggcc 1807
|||||| |||||||| ||||||| | | |||||| || |||||||||||||| | || |
Sbjct: 2079 atcatacccatatagagcctgcc-tattaaaacaacaaccagtacccacatatactggac 2021
Query: 1808 cttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcat 1867
| || ||||||||||| || |||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 2020 cctggataccatccaaccccttcatgttaatatcgaaaaagactatattcctgttggcat 1961
Query: 1868 atcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagca-cactttc 1926
||||||| || |||||||| |||| | ||||||||||| |||||||| ||||| |
Sbjct: 1960 atcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatagcagcactt-c 1902
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 1901 tttccaatagccgggtccatcatgaaacacatagcttctttaatagccttactgttatta 1842
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataag-acagcagagac 2045
| ||| |||||||| |||| |||||| || ||||| || ||| |||| |||||||| ||
Sbjct: 1841 aagtaatgatcacaatccacgttcaaaagatatgctcca-ttggtaagaacagcagatac 1783
Query: 2046 acggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttc 2105
||||| || ||||||||| || |||||||| ||||| || | | | || |||| ||||||
Sbjct: 1782 acggatcaatgcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttc 1723
Query: 2106 tctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttg 2165
| || ||||| | || | ||||| ||||||||| || ||| |||| ||||| ||
Sbjct: 1722 acgagaaacatagatgagtctaggcagctcatttccatcggtatccagacccccactatg 1663
Query: 2166 gccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggct 2225
||| | ||| ||||| ||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 1662 gcctaagaacacctgtatcattccaggatgatctctagtgttgttaccaggccagggagt 1603
Query: 2226 tccatcttgcattgtccatccttcctcagg 2255
||||| ||||||||||| ||||| |||||
Sbjct: 1602 accatcctgcattgtccagccttcttcagg 1573
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 2468 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 2409
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 2408 acatgaatagcctccttcagaagag 2384
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 3309 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 3250
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 3249 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 3190
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 3189 gagcttcccgaaaagcggaccccacgact 3161
Score = 65.9 bits (33), Expect = 5e-008
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 2437 acccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagca 2496
||||||||||||||||| |||| |||||||| | | |||||| |||||||| || | |
Sbjct: 1391 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1332
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaaag 2549
|||||||| |||||||| |||| || || || ||||| || |||||||||||
Sbjct: 1331 ccatcatctgaaacataacaggctactttatctaccgggtagtccacagaaag 1279
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 2930 atgacccagaactgctcgttcctccacca 2902
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase,
transferring glycosyl groups AT4G32410 (CESA1) mRNA,
complete cds
Length = 3912
Score = 115 bits (58), Expect = 6e-023
Identities = 403/510 (79%), Gaps = 6/510 (1%)
Strand = Plus / Minus
Query: 1749 atcataaccatatagtgcctgccgtctgaaaaca-catccagtacccacataaatgggcc 1807
|||||| |||||||| ||||||| | | |||||| || |||||||||||||| | || |
Sbjct: 2212 atcatacccatatagagcctgcc-tattaaaacaacaaccagtacccacatatactggac 2154
Query: 1808 cttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcat 1867
| || ||||||||||| || |||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 2153 cctggataccatccaaccccttcatgttaatatcgaaaaagactatattcctgttggcat 2094
Query: 1868 atcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagca-cactttc 1926
||||||| || |||||||| |||| | ||||||||||| |||||||| ||||| |
Sbjct: 2093 atcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatagcagcactt-c 2035
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 2034 tttccaatagccgggtccatcatgaaacacatagcttctttaatagccttactgttatta 1975
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataag-acagcagagac 2045
| ||| |||||||| |||| |||||| || ||||| || ||| |||| |||||||| ||
Sbjct: 1974 aagtaatgatcacaatccacgttcaaaagatatgctcca-ttggtaagaacagcagatac 1916
Query: 2046 acggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttc 2105
||||| || ||||||||| || |||||||| ||||| || | | | || |||| ||||||
Sbjct: 1915 acggatcaatgcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttc 1856
Query: 2106 tctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttg 2165
| || ||||| | || | ||||| ||||||||| || ||| |||| ||||| ||
Sbjct: 1855 acgagaaacatagatgagtctaggcagctcatttccatcggtatccagacccccactatg 1796
Query: 2166 gccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggct 2225
||| | ||| ||||| ||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 1795 gcctaagaacacctgtatcattccaggatgatctctagtgttgttaccaggccagggagt 1736
Query: 2226 tccatcttgcattgtccatccttcctcagg 2255
||||| ||||||||||| ||||| |||||
Sbjct: 1735 accatcctgcattgtccagccttcttcagg 1706
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 2601 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 2542
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 2541 acatgaatagcctccttcagaagag 2517
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 3442 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 3383
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 3382 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 3323
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 3322 gagcttcccgaaaagcggaccccacgact 3294
Score = 65.9 bits (33), Expect = 5e-008
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 2437 acccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagca 2496
||||||||||||||||| |||| |||||||| | | |||||| |||||||| || | |
Sbjct: 1524 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1465
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaaag 2549
|||||||| |||||||| |||| || || || ||||| || |||||||||||
Sbjct: 1464 ccatcatctgaaacataacaggctactttatctaccgggtagtccacagaaag 1412
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 3063 atgacccagaactgctcgttcctccacca 3035
>gb|AV823575.1|AV823575 AV823575 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-21-E11 5', mRNA
sequence
Length = 582
Score = 113 bits (57), Expect = 2e-022
Identities = 270/341 (79%)
Strand = Plus / Minus
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|||||||| ||||||||||| ||||||||||| || || | || || ||||| || |
Sbjct: 488 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 429
Query: 2227 ccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattg 2286
|| |||||||| ||||| || |||||||| || || || ||| |||| || || ||||||
Sbjct: 428 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 369
Query: 2287 atccttaccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaa 2346
||| |||| |||||||| || || ||||||||||| || | || ||||||||||||||
Sbjct: 368 atctttactttgaattcttcataatctctcttcatggctcgccgctccctaacaaatgcg 309
Query: 2347 gcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacga 2406
| | ||| || | |||| |||||| || || || ||| ||||| || |||||||||
Sbjct: 308 ggatgaactttattcttcaagtagtccattttatggcagaaataccattcgggagcacga 249
Query: 2407 ggctcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttca 2466
||||| ||| | | || |||| |||||||||||||||| |||| ||||||| || |||
Sbjct: 248 ggctcaatacaatatttcttgcagaaaggaacccatttccttgcgaattcagcggtctca 189
Query: 2467 gacaatgcttcaaacgtaagcattgcagcaccatcatcaga 2507
|| | ||||| || |||||||| |||||||||||||||||
Sbjct: 188 gaaagagcttcgaaagtaagcatagcagcaccatcatcaga 148
>gb|BP840603.1|BP840603 BP840603 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-30-K22 5',
mRNA sequence
Length = 408
Score = 113 bits (57), Expect = 2e-022
Identities = 136/161 (84%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| ||| |||
Sbjct: 405 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggccatgc 346
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctctttt 1359
||||| ||||| ||||| |||||||||||||| || ||||| ||||| || | ||| ||
Sbjct: 345 atcttgaatcccgtcaa-atatcctctgtgatagagccatagatccaacccagctcagtt 287
Query: 1360 ccccagtcggtcttgtcttcgtagccgcagctgataacatg 1400
||||| || ||||||||||| || |||||||| || |||||
Sbjct: 286 ccccactcagtcttgtcttcataaccgcagcttatgacatg 246
>gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synthase mRNA, partial cds
Length = 3444
Score = 113 bits (57), Expect = 2e-022
Identities = 270/341 (79%)
Strand = Plus / Minus
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|||||||| ||||||||||| ||||||||||| || || | || || ||||| || |
Sbjct: 1512 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 1453
Query: 2227 ccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattg 2286
|| |||||||| ||||| || |||||||| || || || ||| |||| || || ||||||
Sbjct: 1452 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 1393
Query: 2287 atccttaccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaa 2346
||| |||| |||||||| || || ||||||||||| || | || ||||||||||||||
Sbjct: 1392 atctttactttgaattcttcataatctctcttcatggctcgccgctccctaacaaatgcg 1333
Query: 2347 gcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacga 2406
| | ||| || | |||| |||||| || || || ||| ||||| || |||||||||
Sbjct: 1332 ggatgaactttattcttcaagtagtccattttatggcagaaataccattcgggagcacga 1273
Query: 2407 ggctcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttca 2466
||||| ||| | | || |||| |||||||||||||||| |||| ||||||| || |||
Sbjct: 1272 ggctcaatacaatatttcttgcagaaaggaacccatttccttgcgaattcagcggtctca 1213
Query: 2467 gacaatgcttcaaacgtaagcattgcagcaccatcatcaga 2507
|| | ||||| || |||||||| |||||||||||||||||
Sbjct: 1212 gaaagagcttcgaaagtaagcatagcagcaccatcatcaga 1172
Score = 105 bits (53), Expect = 6e-020
Identities = 242/305 (79%)
Strand = Plus / Minus
Query: 1774 ctgaaaacacatccagtacccacataaatgggcccttgaataccatccaaacctttcatg 1833
||||||||||| || ||||| || || || |||||||| | |||||||||||||||||
Sbjct: 1905 ctgaaaacacaacctgtaccgacgtatataggcccttgtagcccatccaaacctttcata 1846
Query: 1834 ttgatatcaaaaaagacaacgttcctgttagcatatcgatcatgacggtcaataccacca 1893
||||||||||| || ||||| || | || | |||||||| || | ||||| ||| |
Sbjct: 1845 ttgatatcaaagaacacaacattgcgatttgagtatcgatcgtgcctatcaatcccatcg 1786
Query: 1894 aacctctgagggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaa 1953
||||| ||||||||||| ||||| || | |||||| || | ||||||||||||||||
Sbjct: 1785 aacctttgagggaactgaacataacagattttctttcctgactgaggatccatcatgaaa 1726
Query: 1954 cacatagcctcttttatggccttgctattgttgatgtagtgatcacagtccaagttcaat 2013
||||| || ||| | | || |||||||||||||||||||||||||| || | ||||
Sbjct: 1725 cacattgcttctctaagagctttgctattgttgatgtagtgatcacaatcgacattcaga 1666
Query: 2014 aggtatgcagcatttgataagacagcagagacacggaccagtgcattcatggcaccagcc 2073
||||| | ||||||||||| || ||||||| || | ||| | |||||| || ||||||
Sbjct: 1665 aggtaaggagcatttgatagaaccccagagactcgtatcagggaattcatagctccagcc 1606
Query: 2074 ttctt 2078
|||||
Sbjct: 1605 ttctt 1601
Score = 60.0 bits (30), Expect = 3e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 850 aacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctccaccagtcgtcg 909
||||||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 2817 aacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatcatcg 2758
Query: 910 at 911
||
Sbjct: 2757 at 2756
Score = 56.0 bits (28), Expect = 5e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2713 gggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatgagc 2772
|||||||||||||||| ||| || | |||||||| || ||||| || ||||| || |||
Sbjct: 966 gggaactgatcaagaacccatgaaacagcaaaccatatctcacatataacagaaataagc 907
Query: 2773 cacaatgcaaatgcatcttt 2792
||||| ||| ||||||||||
Sbjct: 906 cacaaagcatatgcatcttt 887
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 505 atcgaggccagcaggatggaccagacga 532
||||||||||| ||||||||||||||||
Sbjct: 3162 atcgaggccaggaggatggaccagacga 3135
>emb|AX507835.1| Sequence 2530 from Patent WO0216655
Length = 3255
Score = 113 bits (57), Expect = 2e-022
Identities = 270/341 (79%)
Strand = Plus / Minus
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|||||||| ||||||||||| ||||||||||| || || | || || ||||| || |
Sbjct: 1520 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 1461
Query: 2227 ccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattg 2286
|| |||||||| ||||| || |||||||| || || || ||| |||| || || ||||||
Sbjct: 1460 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 1401
Query: 2287 atccttaccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaa 2346
||| |||| |||||||| || || ||||||||||| || | || ||||||||||||||
Sbjct: 1400 atctttactttgaattcttcataatctctcttcatggctcgccgctccctaacaaatgcg 1341
Query: 2347 gcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacga 2406
| | ||| || | |||| |||||| || || || ||| ||||| || |||||||||
Sbjct: 1340 ggatgaactttattcttcaagtagtccattttatggcagaaataccattcgggagcacga 1281
Query: 2407 ggctcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttca 2466
||||| ||| | | || |||| |||||||||||||||| |||| ||||||| || |||
Sbjct: 1280 ggctcaatacaatatttcttgcagaaaggaacccatttccttgcgaattcagcggtctca 1221
Query: 2467 gacaatgcttcaaacgtaagcattgcagcaccatcatcaga 2507
|| | ||||| || |||||||| |||||||||||||||||
Sbjct: 1220 gaaagagcttcgaaagtaagcatagcagcaccatcatcaga 1180
Score = 105 bits (53), Expect = 6e-020
Identities = 242/305 (79%)
Strand = Plus / Minus
Query: 1774 ctgaaaacacatccagtacccacataaatgggcccttgaataccatccaaacctttcatg 1833
||||||||||| || ||||| || || || |||||||| | |||||||||||||||||
Sbjct: 1913 ctgaaaacacaacctgtaccgacgtatataggcccttgtagcccatccaaacctttcata 1854
Query: 1834 ttgatatcaaaaaagacaacgttcctgttagcatatcgatcatgacggtcaataccacca 1893
||||||||||| || ||||| || | || | |||||||| || | ||||| ||| |
Sbjct: 1853 ttgatatcaaagaacacaacattgcgatttgagtatcgatcgtgcctatcaatcccatcg 1794
Query: 1894 aacctctgagggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaa 1953
||||| ||||||||||| ||||| || | |||||| || | ||||||||||||||||
Sbjct: 1793 aacctttgagggaactgaacataacagattttctttcctgactgaggatccatcatgaaa 1734
Query: 1954 cacatagcctcttttatggccttgctattgttgatgtagtgatcacagtccaagttcaat 2013
||||| || ||| | | || |||||||||||||||||||||||||| || | ||||
Sbjct: 1733 cacattgcttctctaagagctttgctattgttgatgtagtgatcacaatcgacattcaga 1674
Query: 2014 aggtatgcagcatttgataagacagcagagacacggaccagtgcattcatggcaccagcc 2073
||||| | ||||||||||| || ||||||| || | ||| | |||||| || ||||||
Sbjct: 1673 aggtaaggagcatttgatagaaccccagagactcgtatcagggaattcatagctccagcc 1614
Query: 2074 ttctt 2078
|||||
Sbjct: 1613 ttctt 1609
Score = 60.0 bits (30), Expect = 3e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 850 aacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctccaccagtcgtcg 909
||||||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 2825 aacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatcatcg 2766
Query: 910 at 911
||
Sbjct: 2765 at 2764
Score = 56.0 bits (28), Expect = 5e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2713 gggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatgagc 2772
|||||||||||||||| ||| || | |||||||| || ||||| || ||||| || |||
Sbjct: 974 gggaactgatcaagaacccatgaaacagcaaaccatatctcacatataacagaaataagc 915
Query: 2773 cacaatgcaaatgcatcttt 2792
||||| ||| ||||||||||
Sbjct: 914 cacaaagcatatgcatcttt 895
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1468 gatgcgacaaaaacagaagactgcccaaatttcttctc 1505
||||| ||||| |||| |||||||||||||||||||||
Sbjct: 2207 gatgcaacaaatacaggagactgcccaaatttcttctc 2170
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 505 atcgaggccagcaggatggaccagacga 532
||||||||||| ||||||||||||||||
Sbjct: 3170 atcgaggccaggaggatggaccagacga 3143
>ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNTHASE 6); transferase,
transferring glycosyl groups AT5G64740 (CESA6) mRNA,
complete cds
Length = 4105
Score = 113 bits (57), Expect = 2e-022
Identities = 270/341 (79%)
Strand = Plus / Minus
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|||||||| ||||||||||| ||||||||||| || || | || || ||||| || |
Sbjct: 2009 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 1950
Query: 2227 ccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattg 2286
|| |||||||| ||||| || |||||||| || || || ||| |||| || || ||||||
Sbjct: 1949 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 1890
Query: 2287 atccttaccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaa 2346
||| |||| |||||||| || || ||||||||||| || | || ||||||||||||||
Sbjct: 1889 atctttactttgaattcttcataatctctcttcatggctcgccgctccctaacaaatgcg 1830
Query: 2347 gcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacga 2406
| | ||| || | |||| |||||| || || || ||| ||||| || |||||||||
Sbjct: 1829 ggatgaactttattcttcaagtagtccattttatggcagaaataccattcgggagcacga 1770
Query: 2407 ggctcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttca 2466
||||| ||| | | || |||| |||||||||||||||| |||| ||||||| || |||
Sbjct: 1769 ggctcaatacaatatttcttgcagaaaggaacccatttccttgcgaattcagcggtctca 1710
Query: 2467 gacaatgcttcaaacgtaagcattgcagcaccatcatcaga 2507
|| | ||||| || |||||||| |||||||||||||||||
Sbjct: 1709 gaaagagcttcgaaagtaagcatagcagcaccatcatcaga 1669
Score = 105 bits (53), Expect = 6e-020
Identities = 242/305 (79%)
Strand = Plus / Minus
Query: 1774 ctgaaaacacatccagtacccacataaatgggcccttgaataccatccaaacctttcatg 1833
||||||||||| || ||||| || || || |||||||| | |||||||||||||||||
Sbjct: 2402 ctgaaaacacaacctgtaccgacgtatataggcccttgtagcccatccaaacctttcata 2343
Query: 1834 ttgatatcaaaaaagacaacgttcctgttagcatatcgatcatgacggtcaataccacca 1893
||||||||||| || ||||| || | || | |||||||| || | ||||| ||| |
Sbjct: 2342 ttgatatcaaagaacacaacattgcgatttgagtatcgatcgtgcctatcaatcccatcg 2283
Query: 1894 aacctctgagggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaa 1953
||||| ||||||||||| ||||| || | |||||| || | ||||||||||||||||
Sbjct: 2282 aacctttgagggaactgaacataacagattttctttcctgactgaggatccatcatgaaa 2223
Query: 1954 cacatagcctcttttatggccttgctattgttgatgtagtgatcacagtccaagttcaat 2013
||||| || ||| | | || |||||||||||||||||||||||||| || | ||||
Sbjct: 2222 cacattgcttctctaagagctttgctattgttgatgtagtgatcacaatcgacattcaga 2163
Query: 2014 aggtatgcagcatttgataagacagcagagacacggaccagtgcattcatggcaccagcc 2073
||||| | ||||||||||| || ||||||| || | ||| | |||||| || ||||||
Sbjct: 2162 aggtaaggagcatttgatagaaccccagagactcgtatcagggaattcatagctccagcc 2103
Query: 2074 ttctt 2078
|||||
Sbjct: 2102 ttctt 2098
Score = 60.0 bits (30), Expect = 3e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 850 aacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctccaccagtcgtcg 909
||||||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 3314 aacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatcatcg 3255
Query: 910 at 911
||
Sbjct: 3254 at 3253
Score = 56.0 bits (28), Expect = 5e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2713 gggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatgagc 2772
|||||||||||||||| ||| || | |||||||| || ||||| || ||||| || |||
Sbjct: 1463 gggaactgatcaagaacccatgaaacagcaaaccatatctcacatataacagaaataagc 1404
Query: 2773 cacaatgcaaatgcatcttt 2792
||||| ||| ||||||||||
Sbjct: 1403 cacaaagcatatgcatcttt 1384
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1468 gatgcgacaaaaacagaagactgcccaaatttcttctc 1505
||||| ||||| |||| |||||||||||||||||||||
Sbjct: 2696 gatgcaacaaatacaggagactgcccaaatttcttctc 2659
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 505 atcgaggccagcaggatggaccagacga 532
||||||||||| ||||||||||||||||
Sbjct: 3659 atcgaggccaggaggatggaccagacga 3632
>gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
gene, complete cds
Length = 7234
Score = 109 bits (55), Expect = 4e-021
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 3737 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 3678
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatcca 1346
||||| ||||| ||||| |||||||||||||| || ||||| |||||
Sbjct: 3677 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 3631
Score = 77.8 bits (39), Expect = 1e-011
Identities = 108/131 (82%)
Strand = Plus / Minus
Query: 1881 gtcaataccaccaaacctctgagggaactgtacatagcacactttcttccccaccaaagg 1940
|||||| ||| ||||||| ||||||||||| |||||||| || ||||| || | | |||
Sbjct: 2907 gtcaatgccatcaaacctttgagggaactgaacatagcagaccttctttccaatctgagg 2848
Query: 1941 atccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
|||||||| |||||||| || || | | ||||||||| ||||| | |||||||||||
Sbjct: 2847 atccatcaaaaaacacattgcttccctcacggccttgctgttgtttacatagtgatcaca 2788
Query: 2001 gtccaagttca 2011
|||||||||||
Sbjct: 2787 gtccaagttca 2777
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 2706 ccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacaga 2765
|||||| |||||||||||||||||||| || | || ||||||||||||||||| |||||
Sbjct: 1837 ccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacaga 1778
Score = 52.0 bits (26), Expect = 7e-004
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 2434 ggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgca 2493
||||||||||| ||||||| |||| ||||| || | | ||| || |||||||||| |
Sbjct: 2190 ggaacccattttcttgcaaactcagcagtttccgagagagattcgaatgtaagcattgaa 2131
Query: 2494 gcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||| || ||||| ||||||||||||| ||||||||
Sbjct: 2130 gcaccgtcgtcagagacatagcaggagattttctcaac 2093
Score = 50.1 bits (25), Expect = 0.003
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 1750 tcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggccct 1809
||||||||||| || || || ||| |||||||||| |||||||| || |||| || |||
Sbjct: 3117 tcataaccatacagagcttgtcgtttgaaaacacaaccagtaccaacgtaaactggacct 3058
Query: 1810 tgaataccatccaaacctttcatgttgat 1838
|| || ||||| | ||||||||| |||||
Sbjct: 3057 tggattccatctagacctttcatattgat 3029
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccacca 902
||||| ||||||||||| |||||||| ||||||||
Sbjct: 4192 cctccaatgacccagaattgctcgtttctccacca 4158
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 109 bits (55), Expect = 4e-021
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 5490737 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 5490796
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatcca 1346
||||| ||||| ||||| |||||||||||||| || ||||| |||||
Sbjct: 5490797 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 5490843
Score = 81.8 bits (41), Expect = 8e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 2430 gaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcat 2489
|||||||||||||||| | ||||| || | |||||| || | |||||||| ||||||||
Sbjct: 2894372 gaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaaagtaagcat 2894313
Query: 2490 tgcagcaccatcatcagaaacatagcagg 2518
||||||||||||||||||||||| ||||
Sbjct: 2894312 agcagcaccatcatcagaaacataacagg 2894284
Score = 77.8 bits (39), Expect = 1e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
||||| || |||||||||||||| ||| | | || |||| |||||||||||||||| ||
Sbjct: 22908895 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 22908836
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcaga 2507
|| ||||||| || ||||| | ||||| || |||||||| |||||||||||||||||
Sbjct: 22908835 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcaga 22908777
Score = 77.8 bits (39), Expect = 1e-011
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 1881 gtcaataccaccaaacctctgagggaactgtacatagcacactttcttccccaccaaagg 1940
|||||| ||| ||||||| ||||||||||| |||||||| || ||||| || | | |||
Sbjct: 5491567 gtcaatgccatcaaacctttgagggaactgaacatagcagaccttctttccaatctgagg 5491626
Query: 1941 atccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
|||||||| |||||||| || || | | ||||||||| ||||| | |||||||||||
Sbjct: 5491627 atccatcaaaaaacacattgcttccctcacggccttgctgttgtttacatagtgatcaca 5491686
Query: 2001 gtccaagttca 2011
|||||||||||
Sbjct: 5491687 gtccaagttca 5491697
Score = 75.8 bits (38), Expect = 5e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 874 atgacccagaactgctcgttcctccaccagtcgtcgatggccacgccactccacctcatt 933
|||||||| ||||||||||| |||||||| ||||| ||| | ||||||||||||||||||
Sbjct: 1459896 atgacccaaaactgctcgtttctccaccattcgtctatgcctacgccactccacctcatt 1459955
Query: 934 tc 935
||
Sbjct: 1459956 tc 1459957
Score = 69.9 bits (35), Expect = 3e-009
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 1894 aacctctgagggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaa 1953
||||| ||||||||||| ||||| || | |||||| || | ||||||||||||||||
Sbjct: 22909774 aacctttgagggaactgaacataacagattttctttcctgactgaggatccatcatgaaa 22909715
Query: 1954 cacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||| || ||| | | || ||||||||||||||||||||||||||
Sbjct: 22909714 cacattgcttctctaagagctttgctattgttgatgtagtgatcaca 22909668
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 1938 aggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatc 1997
||||||||||||||||||||| || ||| | | || |||||||||||||||||||||||
Sbjct: 22909730 aggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatc 22909671
Query: 1998 acagtccaagttcaataggtatgcagcatttgata 2032
||| || | |||| ||||| | |||||||||||
Sbjct: 22909670 acaatcgacattcagaaggtaaggagcatttgata 22909636
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 2706 ccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacaga 2765
|||||| |||||||||||||||||||| || | || ||||||||||||||||| |||||
Sbjct: 5492637 ccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacaga 5492696
Score = 61.9 bits (31), Expect = 8e-007
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1938 aggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatc 1997
||||||||||||||||||||| || ||| | | || |||||||| ||||||||||||||
Sbjct: 2895158 aggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatc 2895099
Query: 1998 aca 2000
|||
Sbjct: 2895098 aca 2895096
Score = 60.0 bits (30), Expect = 3e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 850 aacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctccaccagtcgtcg 909
||||||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 22911216 aacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatcatcg 22911157
Query: 910 at 911
||
Sbjct: 22911156 at 22911155
Score = 60.0 bits (30), Expect = 3e-006
Identities = 84/102 (82%)
Strand = Plus / Minus
Query: 2676 gtccaggtaagtctctctctcgattggaagccactttgggaactgatcaagaatccagga 2735
||||| ||| |||||||| || || ||| ||| || |||||||||||||||| ||| ||
Sbjct: 2894126 gtccaagtatgtctctctttctataggataccatttagggaactgatcaagaacccatga 2894067
Query: 2736 catcgcaaaccagatttcacagattacagatatgagccacaa 2777
| ||||||||| ||||| || || |||||||| ||||||||
Sbjct: 2894066 aaccgcaaaccatatttcgcatatcacagatattagccacaa 2894025
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 2491 gcagcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1462281 gcagcaccatcatcagaaacataacaggacaccttgtcaac 1462321
Score = 56.0 bits (28), Expect = 5e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2713 gggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatgagc 2772
|||||||||||||||| ||| || | |||||||| || ||||| || ||||| || |||
Sbjct: 22908488 gggaactgatcaagaacccatgaaacagcaaaccatatctcacatataacagaaataagc 22908429
Query: 2773 cacaatgcaaatgcatcttt 2792
||||| ||| ||||||||||
Sbjct: 22908428 cacaaagcatatgcatcttt 22908409
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 570 acccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|||||||||||| ||||||| ||| || |||||||||||||| |||||
Sbjct: 1459589 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaa 1459636
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1468 gatgcgacaaaaacagaagactgcccaaatttcttctc 1505
||||| ||||| |||| |||||||||||||||||||||
Sbjct: 22910356 gatgcaacaaatacaggagactgcccaaatttcttctc 22910319
Score = 52.0 bits (26), Expect = 7e-004
Identities = 113/142 (79%)
Strand = Plus / Minus
Query: 2176 acctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttgc 2235
||||||||||| || |||||||| || ||| || |||||||| || | |||||||||
Sbjct: 16109285 acctgaatcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatcttgc 16109226
Query: 2236 attgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttacc 2295
|| ||| ||||| ||||| |||||| ||||| || || || ||||||||||| ||
Sbjct: 16109225 ataacccaaccttcttcaggcttcttttgagctttagctactaaagcattgatcctcact 16109166
Query: 2296 ttgaattcctcgtattctctct 2317
|||||||| || ||||||||||
Sbjct: 16109165 ttgaattcttcatattctctct 16109144
Score = 52.0 bits (26), Expect = 7e-004
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 2434 ggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgca 2493
||||||||||| ||||||| |||| ||||| || | | ||| || |||||||||| |
Sbjct: 5492284 ggaacccattttcttgcaaactcagcagtttccgagagagattcgaatgtaagcattgaa 5492343
Query: 2494 gcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||| || ||||| ||||||||||||| ||||||||
Sbjct: 5492344 gcaccgtcgtcagagacatagcaggagattttctcaac 5492381
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 1774 ctgaaaacacatccagtacccacataaatgggcccttgaataccatccaaacctttcatg 1833
||||||||||| || ||||| || || || |||||||| | |||||||||||||||||
Sbjct: 22909977 ctgaaaacacaacctgtaccgacgtatataggcccttgtagcccatccaaacctttcata 22909918
Query: 1834 ttgat 1838
|||||
Sbjct: 22909917 ttgat 22909913
Score = 50.1 bits (25), Expect = 0.003
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 1750 tcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggccct 1809
||||||||||| || || || ||| |||||||||| |||||||| || |||| || |||
Sbjct: 5491357 tcataaccatacagagcttgtcgtttgaaaacacaaccagtaccaacgtaaactggacct 5491416
Query: 1810 tgaataccatccaaacctttcatgttgat 1838
|| || ||||| | ||||||||| |||||
Sbjct: 5491417 tggattccatctagacctttcatattgat 5491445
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 2059 ttcatggcaccagccttcttgtgatggttataacctggcctcttttctctcgagacataa 2118
|||||||| ||||||||||||||||||| | | || || ||||| || | || ||||||
Sbjct: 2894931 ttcatggctccagccttcttgtgatggtcaaatccgggtctcttctcacgagaaacataa 2894872
Query: 2119 acaaggcgaggcaactc 2135
|| || |||||||||||
Sbjct: 2894871 accagccgaggcaactc 2894855
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 505 atcgaggccagcaggatggaccagacga 532
||||||||||| ||||||||||||||||
Sbjct: 22911561 atcgaggccaggaggatggaccagacga 22911534
Score = 48.1 bits (24), Expect = 0.012
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || |||||||| || ||||| ||||| || || ||||||||||| |
Sbjct: 2896180 tgctcaagaaaatctcaacagacccgagcgcccaccgaagaacttgatgaagacggtcag 2896121
Query: 1223 aaag 1226
||||
Sbjct: 2896120 aaag 2896117
Score = 48.1 bits (24), Expect = 0.012
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2050 accagtgcattcatggcaccagccttcttgtg 2081
|||||||||||||| ||||||||||| |||||
Sbjct: 1461672 accagtgcattcatagcaccagcctttttgtg 1461703
Score = 46.1 bits (23), Expect = 0.046
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 1304 taaatccagtcaagatatcctctgtgatcgatccataaatccagccaatct 1354
|||||||||| | |||||| ||||| | |||||||||||||| |||||||
Sbjct: 16111022 taaatccagtgaggatatcttctgttactgatccataaatccatccaatct 16110972
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 868 cctccgatgacccagaactgctcgttcctccacca 902
||||| ||||||||||| |||||||| ||||||||
Sbjct: 5490282 cctccaatgacccagaattgctcgtttctccacca 5490316
Score = 46.1 bits (23), Expect = 0.046
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 2463 ttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagac 2522
||||| || ||||||||||||||| | || | ||||||||||| |||||||| || |
Sbjct: 5326048 ttcagccattgcttcaaacgtaagaagcgcccctccatcatcagatacatagcaagaaag 5325989
Query: 2523 cttctcaaccggata 2537
||||||||| |||||
Sbjct: 5325988 cttctcaacaggata 5325974
Score = 44.1 bits (22), Expect = 0.18
Identities = 112/142 (78%)
Strand = Plus / Minus
Query: 2176 acctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttgc 2235
||||| ||||| ||||| ||||| || ||||| || || ||||| || | || ||||||
Sbjct: 2894714 acctggatcatgccagggtgatctcgcacgttattaccgggccaaggagtaccgtcttgc 2894655
Query: 2236 attgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttacc 2295
|| ||||| ||||| ||||| || || || || | ||||| || ||||||||| | |||
Sbjct: 2894654 atagtccaaccttcttcaggcactttctgtgcagtcgcaactaaagcattgatcttaacc 2894595
Query: 2296 ttgaattcctcgtattctctct 2317
|||||||| || || |||||||
Sbjct: 2894594 ttgaattcttcataatctctct 2894573
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project)
Length = 33563
Score = 109 bits (55), Expect = 4e-021
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 21566 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 21625
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatcca 1346
||||| ||||| ||||| |||||||||||||| || ||||| |||||
Sbjct: 21626 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 21672
Score = 77.8 bits (39), Expect = 1e-011
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 1881 gtcaataccaccaaacctctgagggaactgtacatagcacactttcttccccaccaaagg 1940
|||||| ||| ||||||| ||||||||||| |||||||| || ||||| || | | |||
Sbjct: 22396 gtcaatgccatcaaacctttgagggaactgaacatagcagaccttctttccaatctgagg 22455
Query: 1941 atccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
|||||||| |||||||| || || | | ||||||||| ||||| | |||||||||||
Sbjct: 22456 atccatcaaaaaacacattgcttccctcacggccttgctgttgtttacatagtgatcaca 22515
Query: 2001 gtccaagttca 2011
|||||||||||
Sbjct: 22516 gtccaagttca 22526
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 2706 ccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacaga 2765
|||||| |||||||||||||||||||| || | || ||||||||||||||||| |||||
Sbjct: 23466 ccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacaga 23525
Score = 52.0 bits (26), Expect = 7e-004
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 2434 ggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgca 2493
||||||||||| ||||||| |||| ||||| || | | ||| || |||||||||| |
Sbjct: 23113 ggaacccattttcttgcaaactcagcagtttccgagagagattcgaatgtaagcattgaa 23172
Query: 2494 gcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||| || ||||| ||||||||||||| ||||||||
Sbjct: 23173 gcaccgtcgtcagagacatagcaggagattttctcaac 23210
Score = 50.1 bits (25), Expect = 0.003
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 1750 tcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggccct 1809
||||||||||| || || || ||| |||||||||| |||||||| || |||| || |||
Sbjct: 22186 tcataaccatacagagcttgtcgtttgaaaacacaaccagtaccaacgtaaactggacct 22245
Query: 1810 tgaataccatccaaacctttcatgttgat 1838
|| || ||||| | ||||||||| |||||
Sbjct: 22246 tggattccatctagacctttcatattgat 22274
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 868 cctccgatgacccagaactgctcgttcctccacca 902
||||| ||||||||||| |||||||| ||||||||
Sbjct: 21111 cctccaatgacccagaattgctcgtttctccacca 21145
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 109 bits (55), Expect = 4e-021
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 1240 gaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgc 1299
||||||||||||||||||| ||| || |||||||||||||||| ||| ||| |||| |||
Sbjct: 5737764 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 5737823
Query: 1300 atcttaaatccagtcaagatatcctctgtgatcgatccataaatcca 1346
||||| ||||| ||||| |||||||||||||| || ||||| |||||
Sbjct: 5737824 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 5737870
Score = 81.8 bits (41), Expect = 8e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 2430 gaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcat 2489
|||||||||||||||| | ||||| || | |||||| || | |||||||| ||||||||
Sbjct: 3075287 gaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaaagtaagcat 3075228
Query: 2490 tgcagcaccatcatcagaaacatagcagg 2518
||||||||||||||||||||||| ||||
Sbjct: 3075227 agcagcaccatcatcagaaacataacagg 3075199
Score = 77.8 bits (39), Expect = 1e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
||||| || |||||||||||||| ||| | | || |||| |||||||||||||||| ||
Sbjct: 25900808 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 25900749
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcaga 2507
|| ||||||| || ||||| | ||||| || |||||||| |||||||||||||||||
Sbjct: 25900748 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcaga 25900690
Score = 77.8 bits (39), Expect = 1e-011
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 1881 gtcaataccaccaaacctctgagggaactgtacatagcacactttcttccccaccaaagg 1940
|||||| ||| ||||||| ||||||||||| |||||||| || ||||| || | | |||
Sbjct: 5738594 gtcaatgccatcaaacctttgagggaactgaacatagcagaccttctttccaatctgagg 5738653
Query: 1941 atccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
|||||||| |||||||| || || | | ||||||||| ||||| | |||||||||||
Sbjct: 5738654 atccatcaaaaaacacattgcttccctcacggccttgctgttgtttacatagtgatcaca 5738713
Query: 2001 gtccaagttca 2011
|||||||||||
Sbjct: 5738714 gtccaagttca 5738724
Score = 75.8 bits (38), Expect = 5e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 874 atgacccagaactgctcgttcctccaccagtcgtcgatggccacgccactccacctcatt 933
|||||||| ||||||||||| |||||||| ||||| ||| | ||||||||||||||||||
Sbjct: 1530859 atgacccaaaactgctcgtttctccaccattcgtctatgcctacgccactccacctcatt 1530918
Query: 934 tc 935
||
Sbjct: 1530919 tc 1530920
Score = 69.9 bits (35), Expect = 3e-009
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 1894 aacctctgagggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaa 1953
||||| ||||||||||| ||||| || | |||||| || | ||||||||||||||||
Sbjct: 25901687 aacctttgagggaactgaacataacagattttctttcctgactgaggatccatcatgaaa 25901628
Query: 1954 cacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||| || ||| | | || ||||||||||||||||||||||||||
Sbjct: 25901627 cacattgcttctctaagagctttgctattgttgatgtagtgatcaca 25901581
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 1938 aggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatc 1997
||||||||||||||||||||| || ||| | | || |||||||||||||||||||||||
Sbjct: 25901643 aggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatc 25901584
Query: 1998 acagtccaagttcaataggtatgcagcatttgata 2032
||| || | |||| ||||| | |||||||||||
Sbjct: 25901583 acaatcgacattcagaaggtaaggagcatttgata 25901549
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 2706 ccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacaga 2765
|||||| |||||||||||||||||||| || | || ||||||||||||||||| |||||
Sbjct: 5739664 ccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacaga 5739723
Score = 61.9 bits (31), Expect = 8e-007
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 1938 aggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatc 1997
||||||||||||||||||||| || ||| | | || |||||||| ||||||||||||||
Sbjct: 3076073 aggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatc 3076014
Query: 1998 aca 2000
|||
Sbjct: 3076013 aca 3076011
Score = 60.0 bits (30), Expect = 3e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 850 aacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctccaccagtcgtcg 909
||||||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 25903129 aacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatcatcg 25903070
Query: 910 at 911
||
Sbjct: 25903069 at 25903068
Score = 60.0 bits (30), Expect = 3e-006
Identities = 84/102 (82%)
Strand = Plus / Minus
Query: 2676 gtccaggtaagtctctctctcgattggaagccactttgggaactgatcaagaatccagga 2735
||||| ||| |||||||| || || ||| ||| || |||||||||||||||| ||| ||
Sbjct: 3075041 gtccaagtatgtctctctttctataggataccatttagggaactgatcaagaacccatga 3074982
Query: 2736 catcgcaaaccagatttcacagattacagatatgagccacaa 2777
| ||||||||| ||||| || || |||||||| ||||||||
Sbjct: 3074981 aaccgcaaaccatatttcgcatatcacagatattagccacaa 3074940
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 2491 gcagcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1533244 gcagcaccatcatcagaaacataacaggacaccttgtcaac 1533284
Score = 56.0 bits (28), Expect = 5e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2713 gggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatgagc 2772
|||||||||||||||| ||| || | |||||||| || ||||| || ||||| || |||
Sbjct: 25900401 gggaactgatcaagaacccatgaaacagcaaaccatatctcacatataacagaaataagc 25900342
Query: 2773 cacaatgcaaatgcatcttt 2792
||||| ||| ||||||||||
Sbjct: 25900341 cacaaagcatatgcatcttt 25900322
Score = 56.0 bits (28), Expect = 5e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 570 acccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|||||||||||| ||||||| ||| || |||||||||||||| |||||
Sbjct: 1530552 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaa 1530599
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1468 gatgcgacaaaaacagaagactgcccaaatttcttctc 1505
||||| ||||| |||| |||||||||||||||||||||
Sbjct: 25902269 gatgcaacaaatacaggagactgcccaaatttcttctc 25902232
Score = 52.0 bits (26), Expect = 7e-004
Identities = 113/142 (79%)
Strand = Plus / Minus
Query: 2176 acctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttgc 2235
||||||||||| || |||||||| || ||| || |||||||| || | |||||||||
Sbjct: 17733791 acctgaatcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatcttgc 17733732
Query: 2236 attgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttacc 2295
|| ||| ||||| ||||| |||||| ||||| || || || ||||||||||| ||
Sbjct: 17733731 ataacccaaccttcttcaggcttcttttgagctttagctactaaagcattgatcctcact 17733672
Query: 2296 ttgaattcctcgtattctctct 2317
|||||||| || ||||||||||
Sbjct: 17733671 ttgaattcttcatattctctct 17733650
Score = 52.0 bits (26), Expect = 7e-004
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 2434 ggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgca 2493
||||||||||| ||||||| |||| ||||| || | | ||| || |||||||||| |
Sbjct: 5739311 ggaacccattttcttgcaaactcagcagtttccgagagagattcgaatgtaagcattgaa 5739370
Query: 2494 gcaccatcatcagaaacatagcaggagaccttctcaac 2531
||||| || ||||| ||||||||||||| ||||||||
Sbjct: 5739371 gcaccgtcgtcagagacatagcaggagattttctcaac 5739408
Score = 50.1 bits (25), Expect = 0.003
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 1774 ctgaaaacacatccagtacccacataaatgggcccttgaataccatccaaacctttcatg 1833
||||||||||| || ||||| || || || |||||||| | |||||||||||||||||
Sbjct: 25901890 ctgaaaacacaacctgtaccgacgtatataggcccttgtagcccatccaaacctttcata 25901831
Query: 1834 ttgat 1838
|||||
Sbjct: 25901830 ttgat 25901826
Score = 50.1 bits (25), Expect = 0.003
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 1750 tcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggccct 1809
||||||||||| || || || ||| |||||||||| |||||||| || |||| || |||
Sbjct: 5738384 tcataaccatacagagcttgtcgtttgaaaacacaaccagtaccaacgtaaactggacct 5738443
Query: 1810 tgaataccatccaaacctttcatgttgat 1838
|| || ||||| | ||||||||| |||||
Sbjct: 5738444 tggattccatctagacctttcatattgat 5738472
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 2059 ttcatggcaccagccttcttgtgatggttataacctggcctcttttctctcgagacataa 2118
|||||||| ||||||||||||||||||| | | || || ||||| || | || ||||||
Sbjct: 3075846 ttcatggctccagccttcttgtgatggtcaaatccgggtctcttctcacgagaaacataa 3075787
Query: 2119 acaaggcgaggcaactc 2135
|| || |||||||||||
Sbjct: 3075786 accagccgaggcaactc 3075770
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 505 atcgaggccagcaggatggaccagacga 532
||||||||||| ||||||||||||||||
Sbjct: 25903474 atcgaggccaggaggatggaccagacga 25903447
Score = 48.1 bits (24), Expect = 0.012
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || |||||||| || ||||| ||||| || || ||||||||||| |
Sbjct: 3077095 tgctcaagaaaatctcaacagacccgagcgcccaccgaagaacttgatgaagacggtcag 3077036
Query: 1223 aaag 1226
||||
Sbjct: 3077035 aaag 3077032
Score = 48.1 bits (24), Expect = 0.012
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2050 accagtgcattcatggcaccagccttcttgtg 2081
|||||||||||||| ||||||||||| |||||
Sbjct: 1532635 accagtgcattcatagcaccagcctttttgtg 1532666
Score = 46.1 bits (23), Expect = 0.046
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 1304 taaatccagtcaagatatcctctgtgatcgatccataaatccagccaatct 1354
|||||||||| | |||||| ||||| | |||||||||||||| |||||||
Sbjct: 17735528 taaatccagtgaggatatcttctgttactgatccataaatccatccaatct 17735478
Score = 46.1 bits (23), Expect = 0.046
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 868 cctccgatgacccagaactgctcgttcctccacca 902
||||| ||||||||||| |||||||| ||||||||
Sbjct: 5737309 cctccaatgacccagaattgctcgtttctccacca 5737343
Score = 46.1 bits (23), Expect = 0.046
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 2463 ttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagac 2522
||||| || ||||||||||||||| | || | ||||||||||| |||||||| || |
Sbjct: 5563075 ttcagccattgcttcaaacgtaagaagcgcccctccatcatcagatacatagcaagaaag 5563016
Query: 2523 cttctcaaccggata 2537
||||||||| |||||
Sbjct: 5563015 cttctcaacaggata 5563001
Score = 44.1 bits (22), Expect = 0.18
Identities = 112/142 (78%)
Strand = Plus / Minus
Query: 2176 acctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttgc 2235
||||| ||||| ||||| ||||| || ||||| || || ||||| || | || ||||||
Sbjct: 3075629 acctggatcatgccagggtgatctcgcacgttattaccgggccaaggagtaccgtcttgc 3075570
Query: 2236 attgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttacc 2295
|| ||||| ||||| ||||| || || || || | ||||| || ||||||||| | |||
Sbjct: 3075569 atagtccaaccttcttcaggcactttctgtgcagtcgcaactaaagcattgatcttaacc 3075510
Query: 2296 ttgaattcctcgtattctctct 2317
|||||||| || || |||||||
Sbjct: 3075509 ttgaattcttcataatctctct 3075488
>dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3673
Score = 107 bits (54), Expect = 1e-020
Identities = 402/510 (78%), Gaps = 6/510 (1%)
Strand = Plus / Minus
Query: 1749 atcataaccatatagtgcctgccgtctgaaaaca-catccagtacccacataaatgggcc 1807
|||||| |||||||| ||||||| | | |||||| || |||||||||||||| | || |
Sbjct: 2005 atcatacccatatagagcctgcc-tattaaaacaacaaccagtacccacatatactggac 1947
Query: 1808 cttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcat 1867
| || ||||||||||| || |||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 1946 cctggataccatccaaccccttcatgttaatatcgaaaaagactatattcctgttggcat 1887
Query: 1868 atcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagca-cactttc 1926
||||||| || |||||||| |||| | ||||||||||| |||||||| ||| |||
Sbjct: 1886 atcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatagcagcac-ttc 1828
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 1827 tttccaatagccgggtccatcatgaaacacatagcttctttaatagccttactgttatta 1768
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataag-acagcagagac 2045
| ||| |||||||| |||| |||||| || ||||| || ||| |||| ||| |||| ||
Sbjct: 1767 aagtaatgatcacaatccacgttcaaaagatatgctcca-ttggtaagaacaacagatac 1709
Query: 2046 acggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttc 2105
||||| || ||||||||| || |||||||| ||||| || | | | || |||| ||||||
Sbjct: 1708 acggatcaatgcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttc 1649
Query: 2106 tctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttg 2165
| || ||||| | || | ||||| ||||||||| || ||| |||| ||||| ||
Sbjct: 1648 acgagaaacatagatgagtctaggcagctcatttccatcggtatccagacccccactatg 1589
Query: 2166 gccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggct 2225
||| | ||| ||||| ||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 1588 gcctaagaacacctgtatcattccaggatgatctctagtgttgttaccaggccagggagt 1529
Query: 2226 tccatcttgcattgtccatccttcctcagg 2255
||||| ||||||||||| ||||| |||||
Sbjct: 1528 accatcctgcattgtccagccttcttcagg 1499
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 2394 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 2335
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 2334 acatgaatagcctccttcagaagag 2310
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 3235 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 3176
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 3175 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 3116
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 3115 gagcttcccgaaaagcggaccccacgact 3087
Score = 65.9 bits (33), Expect = 5e-008
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 2437 acccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagca 2496
||||||||||||||||| |||| |||||||| | | |||||| |||||||| || | |
Sbjct: 1317 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1258
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaaag 2549
|||||||| |||||||| |||| || || || ||||| || |||||||||||
Sbjct: 1257 ccatcatctgaaacataacaggctactttatctaccgggtagtccacagaaag 1205
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 2856 atgacccagaactgctcgttcctccacca 2828
>emb|AX030948.1| Sequence 11 from Patent WO9800549
Length = 3673
Score = 107 bits (54), Expect = 1e-020
Identities = 402/510 (78%), Gaps = 6/510 (1%)
Strand = Plus / Minus
Query: 1749 atcataaccatatagtgcctgccgtctgaaaaca-catccagtacccacataaatgggcc 1807
|||||| |||||||| ||||||| | | |||||| || |||||||||||||| | || |
Sbjct: 2005 atcatacccatatagagcctgcc-tattaaaacaacaaccagtacccacatatactggac 1947
Query: 1808 cttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcat 1867
| || ||||||||||| || |||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 1946 cctggataccatccaaccccttcatgttaatatcgaaaaagactatattcctgttggcat 1887
Query: 1868 atcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagca-cactttc 1926
||||||| || |||||||| |||| | ||||||||||| |||||||| ||| |||
Sbjct: 1886 atcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatagcagcac-ttc 1828
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 1827 tttccaatagccgggtccatcatgaaacacatagcttctttaatagccttactgttatta 1768
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataag-acagcagagac 2045
| ||| |||||||| |||| |||||| || ||||| || ||| |||| ||| |||| ||
Sbjct: 1767 aagtaatgatcacaatccacgttcaaaagatatgctcca-ttggtaagaacaacagatac 1709
Query: 2046 acggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttc 2105
||||| || ||||||||| || |||||||| ||||| || | | | || |||| ||||||
Sbjct: 1708 acggatcaatgcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttc 1649
Query: 2106 tctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttg 2165
| || ||||| | || | ||||| ||||||||| || ||| |||| ||||| ||
Sbjct: 1648 acgagaaacatagatgagtctaggcagctcatttccatcggtatccagacccccactatg 1589
Query: 2166 gccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggct 2225
||| | ||| ||||| ||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 1588 gcctaagaacacctgtatcattccaggatgatctctagtgttgttaccaggccagggagt 1529
Query: 2226 tccatcttgcattgtccatccttcctcagg 2255
||||| ||||||||||| ||||| |||||
Sbjct: 1528 accatcctgcattgtccagccttcttcagg 1499
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 2394 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 2335
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 2334 acatgaatagcctccttcagaagag 2310
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 3235 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 3176
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 3175 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 3116
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 3115 gagcttcccgaaaagcggaccccacgact 3087
Score = 65.9 bits (33), Expect = 5e-008
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 2437 acccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagca 2496
||||||||||||||||| |||| |||||||| | | |||||| |||||||| || | |
Sbjct: 1317 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1258
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaaag 2549
|||||||| |||||||| |||| || || || ||||| || |||||||||||
Sbjct: 1257 ccatcatctgaaacataacaggctactttatctaccgggtagtccacagaaag 1205
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 2856 atgacccagaactgctcgttcctccacca 2828
>emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH56ZA06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3911
Score = 105 bits (53), Expect = 6e-020
Identities = 242/305 (79%)
Strand = Plus / Minus
Query: 1774 ctgaaaacacatccagtacccacataaatgggcccttgaataccatccaaacctttcatg 1833
||||||||||| || ||||| || || || |||||||| | |||||||||||||||||
Sbjct: 2341 ctgaaaacacaacctgtaccgacgtatataggcccttgtagcccatccaaacctttcata 2282
Query: 1834 ttgatatcaaaaaagacaacgttcctgttagcatatcgatcatgacggtcaataccacca 1893
||||||||||| || ||||| || | || | |||||||| || | ||||| ||| |
Sbjct: 2281 ttgatatcaaagaacacaacattgcgatttgagtatcgatcgtgcctatcaatcccatcg 2222
Query: 1894 aacctctgagggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaa 1953
||||| ||||||||||| ||||| || | |||||| || | ||||||||||||||||
Sbjct: 2221 aacctttgagggaactgaacataacagattttctttcctgactgaggatccatcatgaaa 2162
Query: 1954 cacatagcctcttttatggccttgctattgttgatgtagtgatcacagtccaagttcaat 2013
||||| || ||| | | || |||||||||||||||||||||||||| || | ||||
Sbjct: 2161 cacattgcttctctaagagctttgctattgttgatgtagtgatcacaatcgacattcaga 2102
Query: 2014 aggtatgcagcatttgataagacagcagagacacggaccagtgcattcatggcaccagcc 2073
||||| | ||||||||||| || ||||||| || | ||| | |||||| || ||||||
Sbjct: 2101 aggtaaggagcatttgatagaaccccagagactcgtatcagggaattcatagctccagcc 2042
Query: 2074 ttctt 2078
|||||
Sbjct: 2041 ttctt 2037
Score = 77.8 bits (39), Expect = 1e-011
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
||||| || |||||||||||||| ||| | | || |||| |||||||||||||||| ||
Sbjct: 1725 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 1666
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcaga 2507
|| ||||||| || ||||| | ||||| || |||||||| |||||||||||||||||
Sbjct: 1665 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcaga 1607
Score = 56.0 bits (28), Expect = 5e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2713 gggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatgagc 2772
|||||||||||||||| ||| || | |||||||| || ||||| || ||||| || |||
Sbjct: 1401 gggaactgatcaagaacccatgaaacagcaaaccatatctcacatataacagaaataagc 1342
Query: 2773 cacaatgcaaatgcatcttt 2792
||||| ||| ||||||||||
Sbjct: 1341 cacaaagcatatgcatcttt 1322
Score = 52.0 bits (26), Expect = 7e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1468 gatgcgacaaaaacagaagactgcccaaatttcttctc 1505
||||| ||||| |||| |||||||||||||||||||||
Sbjct: 2635 gatgcaacaaatacaggagactgcccaaatttcttctc 2598
Score = 46.1 bits (23), Expect = 0.046
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 850 aacagatgcgccgaaacgcctccgatga-cccagaactgctcgttcctccaccagtcgtc 908
||||||||||| ||||| ||||| |||| |||| ||||| ||||| |||||||| || ||
Sbjct: 3254 aacagatgcgcagaaacacctccaatgaccccaaaactgttcgtttctccaccaatcatc 3195
Query: 909 gat 911
|||
Sbjct: 3194 gat 3192
>dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 2248
Score = 103 bits (52), Expect = 2e-019
Identities = 397/504 (78%), Gaps = 6/504 (1%)
Strand = Plus / Minus
Query: 1749 atcataaccatatagtgcctgccgtctgaaaaca-catccagtacccacataaatgggcc 1807
|||||| |||||||| ||||||| | | |||||| || |||||||||||||| | || |
Sbjct: 579 atcatacccatatagagcctgcc-tattaaaacaacaaccagtacccacatatactggac 521
Query: 1808 cttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcat 1867
| || ||||||||||| || |||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 520 cgtggataccatccaaccccttcatgttaatatcgaaaaagactatattcctgttggcat 461
Query: 1868 atcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagca-cactttc 1926
||||||| || |||||||| |||| | ||||||||||| |||||||| ||| |||
Sbjct: 460 atcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatagcagcac-ttc 402
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 401 tttccaatagccgggtccatcatgaaacacatagcttctttaatagccttactgttatta 342
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataag-acagcagagac 2045
| ||| |||||||| |||| |||||| || ||||| || ||| |||| |||||||| ||
Sbjct: 341 aagtaatgatcacaatccacgttcaaaagatatgctcca-ttggtaagaacagcagatac 283
Query: 2046 acggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttc 2105
||||| | ||||||||| || |||||||| ||||| || | | | || |||| ||||||
Sbjct: 282 acggatcgatgcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttc 223
Query: 2106 tctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttg 2165
| || ||||| | || | ||||| ||||||||| || ||| |||| ||||| ||
Sbjct: 222 acgagaaacatagatgagtctaggcagctcatttccatcggtatccagacccccactatg 163
Query: 2166 gccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggct 2225
||| | ||| ||||| ||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 162 gcctaagaacacctgtatcattccaggatgatctctagtgttgttaccaggccagggagt 103
Query: 2226 tccatcttgcattgtccatccttc 2249
||||| ||||||||||| |||||
Sbjct: 102 accatcctgcattgtccagccttc 79
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 968 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 909
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 908 acatgaatagcctccttcagaagag 884
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 1809 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 1750
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 1749 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 1690
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 1689 gagcttcccgaaaagcggaccccacgact 1661
>emb|AX030938.1| Sequence 1 from Patent WO9800549
Length = 2248
Score = 103 bits (52), Expect = 2e-019
Identities = 397/504 (78%), Gaps = 6/504 (1%)
Strand = Plus / Minus
Query: 1749 atcataaccatatagtgcctgccgtctgaaaaca-catccagtacccacataaatgggcc 1807
|||||| |||||||| ||||||| | | |||||| || |||||||||||||| | || |
Sbjct: 579 atcatacccatatagagcctgcc-tattaaaacaacaaccagtacccacatatactggac 521
Query: 1808 cttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcat 1867
| || ||||||||||| || |||||||| ||||| |||||||| | |||||||| ||||
Sbjct: 520 cgtggataccatccaaccccttcatgttaatatcgaaaaagactatattcctgttggcat 461
Query: 1868 atcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagca-cactttc 1926
||||||| || |||||||| |||| | ||||||||||| |||||||| ||| |||
Sbjct: 460 atcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatagcagcac-ttc 402
Query: 1927 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 1986
|| || | || |||||||||||||||||||| ||||| || ||||| || || ||
Sbjct: 401 tttccaatagccgggtccatcatgaaacacatagcttctttaatagccttactgttatta 342
Query: 1987 atgtagtgatcacagtccaagttcaataggtatgcagcatttgataag-acagcagagac 2045
| ||| |||||||| |||| |||||| || ||||| || ||| |||| |||||||| ||
Sbjct: 341 aagtaatgatcacaatccacgttcaaaagatatgctcca-ttggtaagaacagcagatac 283
Query: 2046 acggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttc 2105
||||| | ||||||||| || |||||||| ||||| || | | | || |||| ||||||
Sbjct: 282 acggatcgatgcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttc 223
Query: 2106 tctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttg 2165
| || ||||| | || | ||||| ||||||||| || ||| |||| ||||| ||
Sbjct: 222 acgagaaacatagatgagtctaggcagctcatttccatcggtatccagacccccactatg 163
Query: 2166 gccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggct 2225
||| | ||| ||||| ||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 162 gcctaagaacacctgtatcattccaggatgatctctagtgttgttaccaggccagggagt 103
Query: 2226 tccatcttgcattgtccatccttc 2249
||||| ||||||||||| |||||
Sbjct: 102 accatcctgcattgtccagccttc 79
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 968 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 909
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 908 acatgaatagcctccttcagaagag 884
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 1809 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 1750
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 1749 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 1690
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 1689 gagcttcccgaaaagcggaccccacgact 1661
>gb|CB253730.1|CB253730 90-E010932-019-003-C24-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768C243Q 5-PRIME, mRNA sequence
Length = 565
Score = 97.6 bits (49), Expect = 1e-017
Identities = 241/305 (79%)
Strand = Plus / Minus
Query: 1774 ctgaaaacacatccagtacccacataaatgggcccttgaataccatccaaacctttcatg 1833
||||||||||| || ||||| || || || |||| ||| | |||||||||||||||||
Sbjct: 533 ctgaaaacacaacctgtaccgacgtatataggcctttgtagcccatccaaacctttcata 474
Query: 1834 ttgatatcaaaaaagacaacgttcctgttagcatatcgatcatgacggtcaataccacca 1893
||||||||||| || ||||| || | || | |||||||| || | ||||| ||| |
Sbjct: 473 ttgatatcaaagaacacaacattgcgatttgagtatcgatcgtgcctatcaatcccatcg 414
Query: 1894 aacctctgagggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaa 1953
||||| ||||||||||| ||||| || | |||||| || | ||||||||||||||||
Sbjct: 413 aacctttgagggaactgaacataacagattttctttcctgactgaggatccatcatgaaa 354
Query: 1954 cacatagcctcttttatggccttgctattgttgatgtagtgatcacagtccaagttcaat 2013
||||| || ||| | | || |||||||||||||||||||||||||| || | ||||
Sbjct: 353 cacattgcttctctaagagctttgctattgttgatgtagtgatcacaatcgacattcaga 294
Query: 2014 aggtatgcagcatttgataagacagcagagacacggaccagtgcattcatggcaccagcc 2073
||||| | ||||||||||| || ||||||| || | ||| | |||||| || ||||||
Sbjct: 293 aggtaaggagcatttgatagaaccccagagactcgtatcagggaattcatagctccagcc 234
Query: 2074 ttctt 2078
|||||
Sbjct: 233 ttctt 229
Score = 58.0 bits (29), Expect = 1e-005
Identities = 110/137 (80%)
Strand = Plus / Minus
Query: 2167 ccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggctt 2226
|||||||| ||||||||||| ||||||||||| || || | || || ||||| || |
Sbjct: 140 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 81
Query: 2227 ccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattg 2286
|| |||||||| ||||| || |||||||| || || || ||| |||| || || ||||||
Sbjct: 80 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 21
Query: 2287 atccttaccttgaattc 2303
||| |||| ||||||||
Sbjct: 20 atctttactttgaattc 4
>dbj|BD022675.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 5009
Score = 97.6 bits (49), Expect = 1e-017
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
||||||||||||||||||||| || || ||||||||||||||||| || ||||||||||
Sbjct: 3360 tacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttg 3301
Query: 2235 cattgtccatccttcctcagg 2255
||| ||||| |||||||||||
Sbjct: 3300 catagtccaaccttcctcagg 3280
Score = 79.8 bits (40), Expect = 3e-012
Identities = 94/112 (83%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
|||||||||||||| || ||||||||||||||||| || | |||||||||||||| |
Sbjct: 3048 taccactcaggagctcgtggctcgatattaaacttcttacaaaaaggaacccattttcta 2989
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccat 2500
||||| |||| ||| ||||| | |||||||| |||||||| || |||||||
Sbjct: 2988 gcaaactcagctgtatcagagagagcttcaaatgtaagcatagctgcaccat 2937
Score = 61.9 bits (31), Expect = 8e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||||||||||||||||| ||| | || || ||||| ||||||||||||||||||||
Sbjct: 3832 tccatcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcaca 3774
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 4576 ctcttttccccattcggttttatcttcgtacccgcagctaataac 4532
Score = 48.1 bits (24), Expect = 0.012
Identities = 144/184 (78%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 4848 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 4789
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 4788 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 4729
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 4728 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 4669
Query: 1343 tcca 1346
||||
Sbjct: 4668 tcca 4665
>emb|AX030941.1| Sequence 4 from Patent WO9800549
Length = 5009
Score = 97.6 bits (49), Expect = 1e-017
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
||||||||||||||||||||| || || ||||||||||||||||| || ||||||||||
Sbjct: 3360 tacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttg 3301
Query: 2235 cattgtccatccttcctcagg 2255
||| ||||| |||||||||||
Sbjct: 3300 catagtccaaccttcctcagg 3280
Score = 79.8 bits (40), Expect = 3e-012
Identities = 94/112 (83%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
|||||||||||||| || ||||||||||||||||| || | |||||||||||||| |
Sbjct: 3048 taccactcaggagctcgtggctcgatattaaacttcttacaaaaaggaacccattttcta 2989
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccat 2500
||||| |||| ||| ||||| | |||||||| |||||||| || |||||||
Sbjct: 2988 gcaaactcagctgtatcagagagagcttcaaatgtaagcatagctgcaccat 2937
Score = 61.9 bits (31), Expect = 8e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||||||||||||||||| ||| | || || ||||| ||||||||||||||||||||
Sbjct: 3832 tccatcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcaca 3774
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 4576 ctcttttccccattcggttttatcttcgtacccgcagctaataac 4532
Score = 48.1 bits (24), Expect = 0.012
Identities = 144/184 (78%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 4848 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 4789
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 4788 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 4729
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 4728 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 4669
Query: 1343 tcca 1346
||||
Sbjct: 4668 tcca 4665
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
sequence
Length = 107848
Score = 97.6 bits (49), Expect = 1e-017
Identities = 130/157 (82%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
||||| |||||||| || |||||||| | ||||| || | ||||||||||||||| ||
Sbjct: 17832 taccattcaggagcgcgtggctcgatgctgaacttcttacagaaaggaacccattttctt 17773
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaa 2508
||||| || | ||| | ||| | |||||||| ||||||||||||||||||||||| ||
Sbjct: 17772 gcaaactcggctgtgtaagagagagcttcaaatgtaagcattgcagcaccatcatctgat 17713
Query: 2509 acatagcaggagaccttctcaaccggataatccacag 2545
||||| || | |||||||||||||||||||| ||||
Sbjct: 17712 acataacatgcaaccttctcaaccggataatcaacag 17676
Score = 79.8 bits (40), Expect = 3e-012
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacag 2001
|||||||||||||||||||| ||| | || |||||||| ||||||||||| |||||||||
Sbjct: 18536 tccatcatgaaacacatagcttctctaattgccttgctgttgttgatgtaatgatcacag 18477
Query: 2002 tcca 2005
||||
Sbjct: 18476 tcca 18473
Score = 77.8 bits (39), Expect = 1e-011
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
||||||||||||||| ||||| || || || |||||||||||||| || ||||||||||
Sbjct: 18145 tacctgaatcattcctggatggtcccggacattgtttccaggccaaggagttccatcttg 18086
Query: 2235 cattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttac 2294
||| ||||| || || |||||||| || || | | | |||||| ||||| ||| ||||
Sbjct: 18085 catagtccaaccatcttcaggaactttctgtgatacagaaaccaatgcatttatctttac 18026
Query: 2295 cttgaattcctcgtattctctct 2317
||||||||||| || |||||||
Sbjct: 18025 tttgaattcctcatagtctctct 18003
Score = 75.8 bits (38), Expect = 5e-011
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 1141 ccgtaccaaagtgggcagtgcttgctgaagaaaatttcgacagacccaagggcccagcga 1200
|||||||||| ||||| ||| | || |||||||| |||||||| ||||| ||||| ||
Sbjct: 19578 ccgtaccaaatagggcaatgcctactcaagaaaatctcgacagagccaagtgcccaacgt 19519
Query: 1201 aggacctggtgaagacggtcggaaaggttcagaggcgcagaacctttgaatgcaggccgc 1260
|| || || |||||||| || || | ||| | || |||||||||||||| || | |||
Sbjct: 19518 agaacttgatgaagacgatccgacaagttaatgggagcagaacctttgaaagccgctcgc 19459
Query: 1261 ttcgggatgcagtaaatagaccgccagccatggcagtgcatcttaaatccagtcaagata 1320
|| || || || || | ||| | ||| |||||||| |||||||| || || || ||||||
Sbjct: 19458 tttggcatacaatatacagatctccatccatggcaatgcatcttgaaacccgttaagata 19399
Query: 1321 tcctctgtgatcgatccataaatccagccaatct 1354
||||| |||| ||| ||||||||||| |||||||
Sbjct: 19398 tcctcagtgaccgagccataaatccacccaatct 19365
Score = 63.9 bits (32), Expect = 2e-007
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 1747 gcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggc 1806
|||||| | ||||| ||||| |||| |||||| ||||| || || |||||||| || ||
Sbjct: 18816 gcatcaaatccataaagtgcttgccttctgaagacacacccggtccccacatatatcggt 18757
Query: 1807 ccttgaataccatccaaacctttcatgttgat 1838
||||| || ||||| |||||||||||||||||
Sbjct: 18756 ccttgtatgccatctaaacctttcatgttgat 18725
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||||||||||| ||||| || ||||||||||| ||||| |||||
Sbjct: 19282 ctcttttccccattcggttttctcttcgtagccacagctaataac 19238
Score = 50.1 bits (25), Expect = 0.003
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 2689 tctctctcgattggaagccactttgggaactgatcaagaatccaggaca 2737
||||| ||||| ||| ||| ||||||||||||||||||||||| ||||
Sbjct: 17532 tctctttcgatgggataccattttgggaactgatcaagaatccaagaca 17484
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
||||| |||||||| ||||||||||| |||||||| || |||||
Sbjct: 19967 cctccaatgacccaaaactgctcgtttctccaccaatcatcgat 19924
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 97.6 bits (49), Expect = 1e-017
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
||||||||||||||||||||| || || ||||||||||||||||| || ||||||||||
Sbjct: 14212366 tacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttg 14212307
Query: 2235 cattgtccatccttcctcagg 2255
||| ||||| |||||||||||
Sbjct: 14212306 catagtccaaccttcctcagg 14212286
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 2420 actttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaa 2479
||||||||| |||||| ||||||||| | ||||| || | ||| ||| ||| | ||||
Sbjct: 6228042 actttttgcagaaaggtacccatttcctagcaaaatctgctgtctcaaccaaagactcaa 6228101
Query: 2480 acgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataat 2539
||| |||||||||||||||||||||||| |||||||| ||||| || || ||||||||||
Sbjct: 6228102 acgaaagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 6228161
Query: 2540 c 2540
|
Sbjct: 6228162 c 6228162
Score = 83.8 bits (42), Expect = 2e-013
Identities = 156/194 (80%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
|||||||||||||| || ||||||||||||||||| || | |||||||||||||| |
Sbjct: 14212054 taccactcaggagctcgtggctcgatattaaacttcttacaaaaaggaacccattttcta 14211995
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaa 2508
||||| |||| ||| ||||| | |||||||| |||||||| || |||||||| || ||
Sbjct: 14211994 gcaaactcagctgtatcagagagagcttcaaatgtaagcatagctgcaccatcgtctgat 14211935
Query: 2509 acatagcaggagaccttctcaaccggataatccacagaaaggatggaaaggacagtgttc 2568
||||| || | ||||| || || |||||||| || | || |||||||| || |||||
Sbjct: 14211934 acataacacgcaaccttatccacaggataatcaactgctagaatggaaagaactgtgttt 14211875
Query: 2569 gctgtgaccaaggg 2582
||||| | ||||||
Sbjct: 14211874 gctgtaatcaaggg 14211861
Score = 71.9 bits (36), Expect = 8e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataacatgtatagcttcctt 1412
|||||| ||||| || |||||||||||||| || ||||| |||||||| ||||| |||||
Sbjct: 11554895 ctctttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctcctt 11554954
Query: 1413 cagaagag 1420
||||||||
Sbjct: 11554955 cagaagag 11554962
Score = 65.9 bits (33), Expect = 5e-008
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 2437 acccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagca 2496
||||||||||||||||| |||| |||||||| | | |||||| |||||||| || | |
Sbjct: 11556458 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 11556517
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaaag 2549
|||||||| |||||||| |||| || || || ||||| || |||||||||||
Sbjct: 11556518 ccatcatctgaaacataacaggctactttatctaccgggtagtccacagaaag 11556570
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 11553871 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 11553930
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 11553931 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 11553990
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 11553991 gagcttcccgaaaagcggaccccacgact 11554019
Score = 61.9 bits (31), Expect = 8e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||||||||||||||||| ||| | || || ||||| ||||||||||||||||||||
Sbjct: 14212838 tccatcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcaca 14212780
Score = 58.0 bits (29), Expect = 1e-005
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
|||||| ||||||||||||||||| | |||||| ||||||||||| | ||||| ||
Sbjct: 11556118 tacctgtatcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctg 11556177
Query: 2235 cattgtccatccttcctcagg 2255
||||||||| ||||| |||||
Sbjct: 11556178 cattgtccagccttcttcagg 11556198
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 11554250 atgacccagaactgctcgttcctccacca 11554278
Score = 56.0 bits (28), Expect = 5e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatc 2540
||||||||||||| |||||| || |||||||| |||||||||||
Sbjct: 13825136 ccatcatcagaaagatagcatgacaccttctccaccggataatc 13825179
Score = 56.0 bits (28), Expect = 5e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacag 2001
|||||||||||||||||||| ||||| || ||||| || || || | ||| ||||||||
Sbjct: 11555653 tccatcatgaaacacatagcttctttaatagccttactgttattaaagtaatgatcacaa 11555712
Query: 2002 tccaagttcaataggtatgc 2021
|||| |||||| || |||||
Sbjct: 11555713 tccacgttcaaaagatatgc 11555732
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 14213582 ctcttttccccattcggttttatcttcgtacccgcagctaataac 14213538
Score = 50.1 bits (25), Expect = 0.003
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 2024 catttgataagacagcagagacacggaccagtgcattcatggcaccagccttcttgt 2080
||||||| | || ||||||| |||| || |||||||||||||| ||||| |||||||
Sbjct: 13824516 catttgagaggatagcagaggcacgaacaagtgcattcatggctccagctttcttgt 13824572
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2225 ttccatcttgcattgtccatccttc 2249
|||||||||||||||||||||||||
Sbjct: 6227751 ttccatcttgcattgtccatccttc 6227775
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 14214233 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 14214190
Score = 48.1 bits (24), Expect = 0.012
Identities = 144/184 (78%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 14213854 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 14213795
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 14213794 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 14213735
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 14213734 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 14213675
Query: 1343 tcca 1346
||||
Sbjct: 14213674 tcca 14213671
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1975 ttgctattgttgatgtagtgatcaca 2000
||||||||||||| ||||||||||||
Sbjct: 6227362 ttgctattgttgacgtagtgatcaca 6227387
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
Length = 89035
Score = 97.6 bits (49), Expect = 1e-017
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
||||||||||||||||||||| || || ||||||||||||||||| || ||||||||||
Sbjct: 82264 tacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttg 82205
Query: 2235 cattgtccatccttcctcagg 2255
||| ||||| |||||||||||
Sbjct: 82204 catagtccaaccttcctcagg 82184
Score = 83.8 bits (42), Expect = 2e-013
Identities = 156/194 (80%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
|||||||||||||| || ||||||||||||||||| || | |||||||||||||| |
Sbjct: 81952 taccactcaggagctcgtggctcgatattaaacttcttacaaaaaggaacccattttcta 81893
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaa 2508
||||| |||| ||| ||||| | |||||||| |||||||| || |||||||| || ||
Sbjct: 81892 gcaaactcagctgtatcagagagagcttcaaatgtaagcatagctgcaccatcgtctgat 81833
Query: 2509 acatagcaggagaccttctcaaccggataatccacagaaaggatggaaaggacagtgttc 2568
||||| || | ||||| || || |||||||| || | || |||||||| || |||||
Sbjct: 81832 acataacacgcaaccttatccacaggataatcaactgctagaatggaaagaactgtgttt 81773
Query: 2569 gctgtgaccaaggg 2582
||||| | ||||||
Sbjct: 81772 gctgtaatcaaggg 81759
Score = 61.9 bits (31), Expect = 8e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||||||||||||||||| ||| | || || ||||| ||||||||||||||||||||
Sbjct: 82736 tccatcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcaca 82678
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 83480 ctcttttccccattcggttttatcttcgtacccgcagctaataac 83436
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 84131 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 84088
Score = 48.1 bits (24), Expect = 0.012
Identities = 144/184 (78%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 83752 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 83693
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 83692 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 83633
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 83632 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 83573
Query: 1343 tcca 1346
||||
Sbjct: 83572 tcca 83569
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
Length = 198151
Score = 97.6 bits (49), Expect = 1e-017
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
||||||||||||||||||||| || || ||||||||||||||||| || ||||||||||
Sbjct: 19741 tacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttg 19682
Query: 2235 cattgtccatccttcctcagg 2255
||| ||||| |||||||||||
Sbjct: 19681 catagtccaaccttcctcagg 19661
Score = 83.8 bits (42), Expect = 2e-013
Identities = 156/194 (80%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
|||||||||||||| || ||||||||||||||||| || | |||||||||||||| |
Sbjct: 19429 taccactcaggagctcgtggctcgatattaaacttcttacaaaaaggaacccattttcta 19370
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaa 2508
||||| |||| ||| ||||| | |||||||| |||||||| || |||||||| || ||
Sbjct: 19369 gcaaactcagctgtatcagagagagcttcaaatgtaagcatagctgcaccatcgtctgat 19310
Query: 2509 acatagcaggagaccttctcaaccggataatccacagaaaggatggaaaggacagtgttc 2568
||||| || | ||||| || || |||||||| || | || |||||||| || |||||
Sbjct: 19309 acataacacgcaaccttatccacaggataatcaactgctagaatggaaagaactgtgttt 19250
Query: 2569 gctgtgaccaaggg 2582
||||| | ||||||
Sbjct: 19249 gctgtaatcaaggg 19236
Score = 61.9 bits (31), Expect = 8e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||||||||||||||||| ||| | || || ||||| ||||||||||||||||||||
Sbjct: 20213 tccatcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcaca 20155
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 20957 ctcttttccccattcggttttatcttcgtacccgcagctaataac 20913
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 21608 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 21565
Score = 48.1 bits (24), Expect = 0.012
Identities = 144/184 (78%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 21229 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 21170
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 21169 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 21110
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 21109 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 21050
Query: 1343 tcca 1346
||||
Sbjct: 21049 tcca 21046
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 97.6 bits (49), Expect = 1e-017
Identities = 130/157 (82%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
||||| |||||||| || |||||||| | ||||| || | ||||||||||||||| ||
Sbjct: 9293989 taccattcaggagcgcgtggctcgatgctgaacttcttacagaaaggaacccattttctt 9293930
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaa 2508
||||| || | ||| | ||| | |||||||| ||||||||||||||||||||||| ||
Sbjct: 9293929 gcaaactcggctgtgtaagagagagcttcaaatgtaagcattgcagcaccatcatctgat 9293870
Query: 2509 acatagcaggagaccttctcaaccggataatccacag 2545
||||| || | |||||||||||||||||||| ||||
Sbjct: 9293869 acataacatgcaaccttctcaaccggataatcaacag 9293833
Score = 79.8 bits (40), Expect = 3e-012
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacag 2001
|||||||||||||||||||| ||| | || |||||||| ||||||||||| |||||||||
Sbjct: 9294693 tccatcatgaaacacatagcttctctaattgccttgctgttgttgatgtaatgatcacag 9294634
Query: 2002 tcca 2005
||||
Sbjct: 9294633 tcca 9294630
Score = 77.8 bits (39), Expect = 1e-011
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
||||||||||||||| ||||| || || || |||||||||||||| || ||||||||||
Sbjct: 9294302 tacctgaatcattcctggatggtcccggacattgtttccaggccaaggagttccatcttg 9294243
Query: 2235 cattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttac 2294
||| ||||| || || |||||||| || || | | | |||||| ||||| ||| ||||
Sbjct: 9294242 catagtccaaccatcttcaggaactttctgtgatacagaaaccaatgcatttatctttac 9294183
Query: 2295 cttgaattcctcgtattctctct 2317
||||||||||| || |||||||
Sbjct: 9294182 tttgaattcctcatagtctctct 9294160
Score = 75.8 bits (38), Expect = 5e-011
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 1141 ccgtaccaaagtgggcagtgcttgctgaagaaaatttcgacagacccaagggcccagcga 1200
|||||||||| ||||| ||| | || |||||||| |||||||| ||||| ||||| ||
Sbjct: 9295735 ccgtaccaaatagggcaatgcctactcaagaaaatctcgacagagccaagtgcccaacgt 9295676
Query: 1201 aggacctggtgaagacggtcggaaaggttcagaggcgcagaacctttgaatgcaggccgc 1260
|| || || |||||||| || || | ||| | || |||||||||||||| || | |||
Sbjct: 9295675 agaacttgatgaagacgatccgacaagttaatgggagcagaacctttgaaagccgctcgc 9295616
Query: 1261 ttcgggatgcagtaaatagaccgccagccatggcagtgcatcttaaatccagtcaagata 1320
|| || || || || | ||| | ||| |||||||| |||||||| || || || ||||||
Sbjct: 9295615 tttggcatacaatatacagatctccatccatggcaatgcatcttgaaacccgttaagata 9295556
Query: 1321 tcctctgtgatcgatccataaatccagccaatct 1354
||||| |||| ||| ||||||||||| |||||||
Sbjct: 9295555 tcctcagtgaccgagccataaatccacccaatct 9295522
Score = 63.9 bits (32), Expect = 2e-007
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 1747 gcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggc 1806
|||||| | ||||| ||||| |||| |||||| ||||| || || |||||||| || ||
Sbjct: 9294973 gcatcaaatccataaagtgcttgccttctgaagacacacccggtccccacatatatcggt 9294914
Query: 1807 ccttgaataccatccaaacctttcatgttgat 1838
||||| || ||||| |||||||||||||||||
Sbjct: 9294913 ccttgtatgccatctaaacctttcatgttgat 9294882
Score = 56.0 bits (28), Expect = 5e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 871 ccgatgacccagaactgctcgttcctccaccagtcgtcgatggccacgccactcca 926
||||| ||||| ||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 10874596 ccgattacccaaaactgctcgttcctccaccagtcttcaagggccacatcactcca 10874651
Score = 54.0 bits (27), Expect = 2e-004
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||||||||||||||| || || || || |||||||| ||||||| ||| ||||||||
Sbjct: 10875991 tccatcatgaaacacatggcttccttaatcgccttgctgttgttgaagtaatgatcaca 10876049
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||||||||||| ||||| || ||||||||||| ||||| |||||
Sbjct: 9295439 ctcttttccccattcggttttctcttcgtagccacagctaataac 9295395
Score = 50.1 bits (25), Expect = 0.003
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 2689 tctctctcgattggaagccactttgggaactgatcaagaatccaggaca 2737
||||| ||||| ||| ||| ||||||||||||||||||||||| ||||
Sbjct: 9293689 tctctttcgatgggataccattttgggaactgatcaagaatccaagaca 9293641
Score = 48.1 bits (24), Expect = 0.012
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacag 2001
||||||||||||||||| | ||||| || || ||| |||| ||||||||||||||||
Sbjct: 14045222 tccatcatgaaacacattccttctttgatagctttggagttgtagatgtagtgatcacag 14045281
Query: 2002 tcca 2005
||||
Sbjct: 14045282 tcca 14045285
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
||||| |||||||| ||||||||||| |||||||| || |||||
Sbjct: 9296124 cctccaatgacccaaaactgctcgtttctccaccaatcatcgat 9296081
Score = 46.1 bits (23), Expect = 0.046
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 2710 tttgggaactgatcaagaatccaggacatcgcaaaccagatttcaca 2756
||||||||||||||||||| ||| || | ||||||||||| |||||
Sbjct: 10877228 tttgggaactgatcaagaagccaagaaaaggcaaaccagatctcaca 10877274
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 97.6 bits (49), Expect = 1e-017
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
||||||||||||||||||||| || || ||||||||||||||||| || ||||||||||
Sbjct: 18299566 tacctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttg 18299507
Query: 2235 cattgtccatccttcctcagg 2255
||| ||||| |||||||||||
Sbjct: 18299506 catagtccaaccttcctcagg 18299486
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 2420 actttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaa 2479
||||||||| |||||| ||||||||| | ||||| || | ||| ||| ||| | ||||
Sbjct: 10315297 actttttgcagaaaggtacccatttcctagcaaaatctgctgtctcaaccaaagactcaa 10315356
Query: 2480 acgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataat 2539
||| |||||||||||||||||||||||| |||||||| ||||| || || ||||||||||
Sbjct: 10315357 acgaaagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 10315416
Query: 2540 c 2540
|
Sbjct: 10315417 c 10315417
Score = 83.8 bits (42), Expect = 2e-013
Identities = 156/194 (80%)
Strand = Plus / Minus
Query: 2389 taccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttcttt 2448
|||||||||||||| || ||||||||||||||||| || | |||||||||||||| |
Sbjct: 18299254 taccactcaggagctcgtggctcgatattaaacttcttacaaaaaggaacccattttcta 18299195
Query: 2449 gcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaa 2508
||||| |||| ||| ||||| | |||||||| |||||||| || |||||||| || ||
Sbjct: 18299194 gcaaactcagctgtatcagagagagcttcaaatgtaagcatagctgcaccatcgtctgat 18299135
Query: 2509 acatagcaggagaccttctcaaccggataatccacagaaaggatggaaaggacagtgttc 2568
||||| || | ||||| || || |||||||| || | || |||||||| || |||||
Sbjct: 18299134 acataacacgcaaccttatccacaggataatcaactgctagaatggaaagaactgtgttt 18299075
Query: 2569 gctgtgaccaaggg 2582
||||| | ||||||
Sbjct: 18299074 gctgtaatcaaggg 18299061
Score = 71.9 bits (36), Expect = 8e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataacatgtatagcttcctt 1412
|||||| ||||| || |||||||||||||| || ||||| |||||||| ||||| |||||
Sbjct: 15642120 ctctttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctcctt 15642179
Query: 1413 cagaagag 1420
||||||||
Sbjct: 15642180 cagaagag 15642187
Score = 65.9 bits (33), Expect = 5e-008
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 2437 acccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagca 2496
||||||||||||||||| |||| |||||||| | | |||||| |||||||| || | |
Sbjct: 15643683 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 15643742
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaaag 2549
|||||||| |||||||| |||| || || || ||||| || |||||||||||
Sbjct: 15643743 ccatcatctgaaacataacaggctactttatctaccgggtagtccacagaaag 15643795
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 15641096 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 15641155
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 15641156 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 15641215
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 15641216 gagcttcccgaaaagcggaccccacgact 15641244
Score = 61.9 bits (31), Expect = 8e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
||||||||||||||||||| ||| | || || ||||| ||||||||||||||||||||
Sbjct: 18300038 tccatcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcaca 18299980
Score = 58.0 bits (29), Expect = 1e-005
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 2175 tacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttg 2234
|||||| ||||||||||||||||| | |||||| ||||||||||| | ||||| ||
Sbjct: 15643343 tacctgtatcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctg 15643402
Query: 2235 cattgtccatccttcctcagg 2255
||||||||| ||||| |||||
Sbjct: 15643403 cattgtccagccttcttcagg 15643423
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 15641475 atgacccagaactgctcgttcctccacca 15641503
Score = 56.0 bits (28), Expect = 5e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 2497 ccatcatcagaaacatagcaggagaccttctcaaccggataatc 2540
||||||||||||| |||||| || |||||||| |||||||||||
Sbjct: 17912341 ccatcatcagaaagatagcatgacaccttctccaccggataatc 17912384
Score = 56.0 bits (28), Expect = 5e-005
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacag 2001
|||||||||||||||||||| ||||| || ||||| || || || | ||| ||||||||
Sbjct: 15642878 tccatcatgaaacacatagcttctttaatagccttactgttattaaagtaatgatcacaa 15642937
Query: 2002 tccaagttcaataggtatgc 2021
|||| |||||| || |||||
Sbjct: 15642938 tccacgttcaaaagatatgc 15642957
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 18300782 ctcttttccccattcggttttatcttcgtacccgcagctaataac 18300738
Score = 50.1 bits (25), Expect = 0.003
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 2024 catttgataagacagcagagacacggaccagtgcattcatggcaccagccttcttgt 2080
||||||| | || ||||||| |||| || |||||||||||||| ||||| |||||||
Sbjct: 17911721 catttgagaggatagcagaggcacgaacaagtgcattcatggctccagctttcttgt 17911777
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2225 ttccatcttgcattgtccatccttc 2249
|||||||||||||||||||||||||
Sbjct: 10315006 ttccatcttgcattgtccatccttc 10315030
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 18301433 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 18301390
Score = 48.1 bits (24), Expect = 0.012
Identities = 144/184 (78%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 18301054 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 18300995
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 18300994 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 18300935
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 18300934 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 18300875
Query: 1343 tcca 1346
||||
Sbjct: 18300874 tcca 18300871
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1975 ttgctattgttgatgtagtgatcaca 2000
||||||||||||| ||||||||||||
Sbjct: 10314617 ttgctattgttgacgtagtgatcaca 10314642
>ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNTHASE 5); transferase,
transferring glycosyl groups AT5G09870 (CESA5) mRNA,
complete cds
Length = 3210
Score = 95.6 bits (48), Expect = 6e-017
Identities = 300/384 (78%)
Strand = Plus / Minus
Query: 1938 aggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatc 1997
||||||||||||||||||||| || ||| | | || |||||||| ||||||||||||||
Sbjct: 1713 aggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatc 1654
Query: 1998 acagtccaagttcaataggtatgcagcatttgataagacagcagagacacggaccagtgc 2057
||| || | || | || || | ||||||||||| || ||||||| || | ||| |
Sbjct: 1653 acaatcgacatttagaagataaggagcatttgatagaactccagagactcgtatcaggga 1594
Query: 2058 attcatggcaccagccttcttgtgatggttataacctggcctcttttctctcgagacata 2117
|||||||| ||||||||||||||||||| | | || || ||||| || | || |||||
Sbjct: 1593 gttcatggctccagccttcttgtgatggtcaaatccgggtctcttctcacgagaaacata 1534
Query: 2118 aacaaggcgaggcaactcatttccttccacatcacgaccaccactttggccaaggaatac 2177
||| || ||||||||||| || ||| ||||| || |||| | | |||||||||||
Sbjct: 1533 aaccagccgaggcaactcgttgttttctacatcgcggacaccgttatttccaaggaatac 1474
Query: 2178 ctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttgcat 2237
||| ||||| ||||| ||||| || ||||| || || ||||| || | || ||||||||
Sbjct: 1473 ctggatcatgccagggtgatctcgcacgttattaccgggccaaggagtaccgtcttgcat 1414
Query: 2238 tgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttacctt 2297
||||| ||||| ||||| || || || || | ||||| || ||||||||| | |||||
Sbjct: 1413 agtccaaccttcttcaggcactttctgtgcagtcgcaactaaagcattgatcttaacctt 1354
Query: 2298 gaattcctcgtattctctcttcat 2321
|||||| || || |||||||||||
Sbjct: 1353 gaattcttcataatctctcttcat 1330
Score = 81.8 bits (41), Expect = 8e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 2430 gaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcat 2489
|||||||||||||||| | ||||| || | |||||| || | |||||||| ||||||||
Sbjct: 1221 gaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaaagtaagcat 1162
Query: 2490 tgcagcaccatcatcagaaacatagcagg 2518
||||||||||||||||||||||| ||||
Sbjct: 1161 agcagcaccatcatcagaaacataacagg 1133
Score = 60.0 bits (30), Expect = 3e-006
Identities = 84/102 (82%)
Strand = Plus / Minus
Query: 2676 gtccaggtaagtctctctctcgattggaagccactttgggaactgatcaagaatccagga 2735
||||| ||| |||||||| || || ||| ||| || |||||||||||||||| ||| ||
Sbjct: 975 gtccaagtatgtctctctttctataggataccatttagggaactgatcaagaacccatga 916
Query: 2736 catcgcaaaccagatttcacagattacagatatgagccacaa 2777
| ||||||||| ||||| || || |||||||| ||||||||
Sbjct: 915 aaccgcaaaccatatttcgcatatcacagatattagccacaa 874
Score = 56.0 bits (28), Expect = 5e-005
Identities = 208/268 (77%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || |||||||| || ||||| ||||| || || ||||||||||| |
Sbjct: 2467 tgctcaagaaaatctcaacagacccgagcgcccaccgaagaacttgatgaagacggtcag 2408
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
|||| || | ||| || || ||||| || || || ||| || | ||||||| || |
Sbjct: 2407 aaagattgataggtgctgatcctttaaaggccggtatcttaggtgtacagtaaaccgatc 2348
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||||||||| | |||||||| || || || | ||||||||| |||| || || || |
Sbjct: 2347 tccagccatgagaatgcatcttgaaacccgtaaggatatcctcggtgacagaaccgtaga 2288
Query: 1343 tccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataacatgta 1402
|||| ||||||||||||||||| ||||| || |||||||| || || || || || || |
Sbjct: 2287 tccacccaatctcttttccccattcggttttatcttcgtatccacaactaatgacttgga 2228
Query: 1403 tagcttccttcagaagagaagctggact 1430
| ||||| | || ||||||||||||||
Sbjct: 2227 tggcttctctaagcagagaagctggact 2200
>gb|AY059858.1| Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
(At4g39350; T22F8.250) mRNA, complete cds
Length = 1699
Score = 93.7 bits (47), Expect = 2e-016
Identities = 188/235 (80%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 782 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 723
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 722 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 663
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 662 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 603
Query: 1343 tccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||| || |||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 602 tccacccgatctcttttccccattcggttttatcttcgtacccgcagctaataac 548
Score = 60.0 bits (30), Expect = 3e-006
Identities = 144/182 (79%)
Strand = Plus / Minus
Query: 1747 gcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggc 1806
|||||| ||||||| || ||||| | ||| || ||||| || || || ||||| || ||
Sbjct: 216 gcatcaaaaccataaagagcctgtcttctaaacacacaacctgtcccgacatatatcggt 157
Query: 1807 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagca 1866
||||| || ||||| | |||||||||||| |||||||| || |||||||| | ||| |
Sbjct: 156 ccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggtttgag 97
Query: 1867 tatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttc 1926
|||| |||||| | ||||| ||| |||| ||||| || ||||| ||||| || ||||||
Sbjct: 96 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 37
Query: 1927 tt 1928
||
Sbjct: 36 tt 35
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 1077 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 1034
>gb|AY093308.1| Arabidopsis thaliana cellulose synthase catalytic subunit (At4g39350)
mRNA, complete cds
Length = 1587
Score = 93.7 bits (47), Expect = 2e-016
Identities = 188/235 (80%)
Strand = Plus / Minus
Query: 1163 tgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcgg 1222
|||| |||||||| || ||||| ||||| ||||| || || || || |||||||| || |
Sbjct: 778 tgctcaagaaaatctctacagagccaagagcccaacgtagaacttgatgaagacgatctg 719
Query: 1223 aaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagacc 1282
| | ||| | ||| ||||| ||||| || || | ||||| || || ||||| | ||| |
Sbjct: 718 acaagttaataggagcagatcctttaaaagctgcacgcttaggcatacagtacacagatc 659
Query: 1283 gccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaa 1342
||| |||||||| |||||||| || || |||| |||||| || || | |||||||||||
Sbjct: 658 tccatccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaa 599
Query: 1343 tccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataac 1397
|||| || |||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 598 tccacccgatctcttttccccattcggttttatcttcgtacccgcagctaataac 544
Score = 60.0 bits (30), Expect = 3e-006
Identities = 144/182 (79%)
Strand = Plus / Minus
Query: 1747 gcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggc 1806
|||||| ||||||| || ||||| | ||| || ||||| || || || ||||| || ||
Sbjct: 212 gcatcaaaaccataaagagcctgtcttctaaacacacaacctgtcccgacatatatcggt 153
Query: 1807 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagca 1866
||||| || ||||| | |||||||||||| |||||||| || |||||||| | ||| |
Sbjct: 152 ccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggtttgag 93
Query: 1867 tatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttc 1926
|||| |||||| | ||||| ||| |||| ||||| || ||||| ||||| || ||||||
Sbjct: 92 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 33
Query: 1927 tt 1928
||
Sbjct: 32 tt 31
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgat 911
|||||||| ||||| ||||||||||| |||||||| || |||||
Sbjct: 1073 cctccgattacccaaaactgctcgtttctccaccaatcatcgat 1030
>gb|CF651830.1|CF651830 17-L020525-066-003-B05-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001B053Q 5-PRIME, mRNA sequence
Length = 821
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 622 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 563
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 562 acatgaatagcctccttcagaagag 538
>gb|BP819896.1|BP819896 BP819896 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-52-M12 5',
mRNA sequence
Length = 386
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 197 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 138
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 137 acatgaatagcctccttcagaagag 113
>gb|BP824749.1|BP824749 BP824749 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-66-D23 5',
mRNA sequence
Length = 387
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 198 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 139
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 138 acatgaatagcctccttcagaagag 114
>gb|BP831231.1|BP831231 BP831231 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-88-F17 5',
mRNA sequence
Length = 410
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 196 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 137
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 136 acatgaatagcctccttcagaagag 112
>gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like protein (At4g18780)
mRNA, complete cds
Length = 3109
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 2420 actttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaa 2479
||||||||| |||||| ||||||||| | ||||| || | ||| ||| ||| | ||||
Sbjct: 1058 actttttgcagaaaggtacccatttcctagcaaaatctgctgtctcaaccaaagactcaa 999
Query: 2480 acgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataat 2539
||| |||||||||||||||||||||||| |||||||| ||||| || || ||||||||||
Sbjct: 998 acgaaagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 939
Query: 2540 c 2540
|
Sbjct: 938 c 938
Score = 63.9 bits (32), Expect = 2e-007
Identities = 113/140 (80%)
Strand = Plus / Minus
Query: 1270 cagtaaatagaccgccagccatggcagtgcatcttaaatccagtcaagatatcctctgtg 1329
|||||||| |||| ||| ||| | || |||||||| || || ||||| || || || |||
Sbjct: 2166 cagtaaatcgacctccatccacgacaatgcatcttgaaacccgtcaaaatgtcttcggtg 2107
Query: 1330 atcgatccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcag 1389
||||| || |||||||| || || ||||||||||| || || || |||||||| || |||
Sbjct: 2106 atcgacccgtaaatccatcctatttcttttccccattcagttttctcttcgtatccacag 2047
Query: 1390 ctgataacatgtatagcttc 1409
|| || ||||| ||||||||
Sbjct: 2046 ctaatgacatgaatagcttc 2027
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 2225 ttccatcttgcattgtccatccttc 2249
|||||||||||||||||||||||||
Sbjct: 1253 ttccatcttgcattgtccatccttc 1229
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1975 ttgctattgttgatgtagtgatcaca 2000
||||||||||||| ||||||||||||
Sbjct: 1503 ttgctattgttgacgtagtgatcaca 1478
>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
Length = 94301
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 2420 actttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaa 2479
||||||||| |||||| ||||||||| | ||||| || | ||| ||| ||| | ||||
Sbjct: 74144 actttttgcagaaaggtacccatttcctagcaaaatctgctgtctcaaccaaagactcaa 74203
Query: 2480 acgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataat 2539
||| |||||||||||||||||||||||| |||||||| ||||| || || ||||||||||
Sbjct: 74204 acgaaagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 74263
Query: 2540 c 2540
|
Sbjct: 74264 c 74264
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2225 ttccatcttgcattgtccatccttc 2249
|||||||||||||||||||||||||
Sbjct: 73853 ttccatcttgcattgtccatccttc 73877
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1975 ttgctattgttgatgtagtgatcaca 2000
||||||||||||| ||||||||||||
Sbjct: 73464 ttgctattgttgacgtagtgatcaca 73489
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
Length = 199075
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 2420 actttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaa 2479
||||||||| |||||| ||||||||| | ||||| || | ||| ||| ||| | ||||
Sbjct: 93425 actttttgcagaaaggtacccatttcctagcaaaatctgctgtctcaaccaaagactcaa 93484
Query: 2480 acgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataat 2539
||| |||||||||||||||||||||||| |||||||| ||||| || || ||||||||||
Sbjct: 93485 acgaaagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 93544
Query: 2540 c 2540
|
Sbjct: 93545 c 93545
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2225 ttccatcttgcattgtccatccttc 2249
|||||||||||||||||||||||||
Sbjct: 93134 ttccatcttgcattgtccatccttc 93158
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1975 ttgctattgttgatgtagtgatcaca 2000
||||||||||||| ||||||||||||
Sbjct: 92745 ttgctattgttgacgtagtgatcaca 92770
>dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit,
complete cds, clone: RAFL22-92-A12
Length = 1456
Score = 89.7 bits (45), Expect = 3e-015
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| |||
Sbjct: 197 ccatagatccaaccaatctctttgccccattcagtcttgtcttcgtaaccacagcttata 138
Query: 1396 acatgtatagcttccttcagaagag 1420
||||| ||||| |||||||||||||
Sbjct: 137 acatgaatagcctccttcagaagag 113
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 498 cgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggcgtcctgttctg 557
||||||||| ||||| || || | |||||||| |||||||| || || || | ||| ||
Sbjct: 1038 cgagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggttttg 979
Query: 558 cctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaa 617
|| |||| |||||| || | ||| ||||| || ||| | || ||||| |||||||||||
Sbjct: 978 tcttcccaacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaa 919
Query: 618 gagcttcccgaacagggggccccacgact 646
|||||||||||| || || ||||||||||
Sbjct: 918 gagcttcccgaaaagcggaccccacgact 890
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 874 atgacccagaactgctcgttcctccacca 902
|||||||||||||||||||||||||||||
Sbjct: 659 atgacccagaactgctcgttcctccacca 631
>ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNTHASE 8); cellulose
synthase/ transferase, transferring glycosyl groups
AT4G18780 (CESA8) mRNA, complete cds
Length = 3217
Score = 89.7 bits (45), Expect = 3e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 2420 actttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaa 2479
||||||||| |||||| ||||||||| | ||||| || | ||| ||| ||| | ||||
Sbjct: 1058 actttttgcagaaaggtacccatttcctagcaaaatctgctgtctcaaccaaagactcaa 999
Query: 2480 acgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataat 2539
||| |||||||||||||||||||||||| |||||||| ||||| || || ||||||||||
Sbjct: 998 acgaaagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataat 939
Query: 2540 c 2540
|
Sbjct: 938 c 938
Score = 63.9 bits (32), Expect = 2e-007
Identities = 113/140 (80%)
Strand = Plus / Minus
Query: 1270 cagtaaatagaccgccagccatggcagtgcatcttaaatccagtcaagatatcctctgtg 1329
|||||||| |||| ||| ||| | || |||||||| || || ||||| || || || |||
Sbjct: 2166 cagtaaatcgacctccatccacgacaatgcatcttgaaacccgtcaaaatgtcttcggtg 2107
Query: 1330 atcgatccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcag 1389
||||| || |||||||| || || ||||||||||| || || || |||||||| || |||
Sbjct: 2106 atcgacccgtaaatccatcctatttcttttccccattcagttttctcttcgtatccacag 2047
Query: 1390 ctgataacatgtatagcttc 1409
|| || ||||| ||||||||
Sbjct: 2046 ctaatgacatgaatagcttc 2027
Score = 50.1 bits (25), Expect = 0.003
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 2225 ttccatcttgcattgtccatccttc 2249
|||||||||||||||||||||||||
Sbjct: 1253 ttccatcttgcattgtccatccttc 1229
Score = 44.1 bits (22), Expect = 0.18
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1975 ttgctattgttgatgtagtgatcaca 2000
||||||||||||| ||||||||||||
Sbjct: 1503 ttgctattgttgacgtagtgatcaca 1478
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,659,144
Number of Sequences: 1013581
Number of extensions: 1659144
Number of successful extensions: 128470
Number of sequences better than 0.5: 217
Number of HSP's better than 0.5 without gapping: 220
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 116779
Number of HSP's gapped (non-prelim): 11584
length of query: 3914
length of database: 908,940,872
effective HSP length: 21
effective length of query: 3893
effective length of database: 887,655,671
effective search space: 3455643527203
effective search space used: 3455643527203
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)