BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276343.2.2
(1340 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|A75959.1| Sequence 1 from Patent WO9321326 78 4e-012
gb|AY054688.1| Arabidopsis thaliana NADPH-ferrihemoprotein ... 78 4e-012
gb|BT008426.1| Arabidopsis thaliana At4g24520 gene, complet... 78 4e-012
emb|BX827429.1|CNS0A2GR Arabidopsis thaliana Full-length cD... 78 4e-012
emb|X66016.1|ATATR1G A.thaliana ATR1 mRNA for NADPH-cytochr... 78 4e-012
ref|NM_118585.2| Arabidopsis thaliana ATR1 (ARABIDOPSIS CYT... 78 4e-012
dbj|AK222148.1| Arabidopsis thaliana mRNA for NADPH-ferrihe... 70 1e-009
gb|BE844735.1|BE844735 AD01F06T7 AD A. thaliana (Col-0 gl1)... 68 4e-009
gb|AV806552.1|AV806552 AV806552 RAFL9 Arabidopsis thaliana ... 68 4e-009
gb|CB259345.1|CB259345 61-E9535-013-002-I15-T7R MPIZ-ADIS-0... 68 4e-009
gb|AV538942.1|AV538942 AV538942 Arabidopsis thaliana roots ... 68 4e-009
gb|AV544567.1|AV544567 AV544567 Arabidopsis thaliana roots ... 68 4e-009
gb|BP603541.1|BP603541 BP603541 RAFL16 Arabidopsis thaliana... 68 4e-009
gb|CB252987.1|CB252987 12-E015330-019-005-G03-T7R MPIZ-ADIS... 68 4e-009
gb|BP792144.1|BP792144 BP792144 RAFL7 Arabidopsis thaliana ... 68 4e-009
emb|A75961.1| Sequence 3 from Patent WO9321326 68 4e-009
gb|AF367288.1|AF367288 Arabidopsis thaliana AT4g30210/F9N11... 68 4e-009
gb|AY059162.1| Arabidopsis thaliana AT4g30210/F9N11_60 mRNA... 68 4e-009
gb|AF325101.1|AF325101 Arabidopsis thaliana NADPH-ferrihemo... 68 4e-009
emb|AX506108.1| Sequence 803 from Patent WO0216655 68 4e-009
emb|AX651759.1| Sequence 605 from Patent WO03000898 68 4e-009
emb|X66017.1|ATATR2M A.thaliana mRNA ATR2 for NADPH-cytochr... 68 4e-009
ref|NM_179141.1| Arabidopsis thaliana ATR2 AT4G30210 (ATR2)... 68 4e-009
ref|NM_119167.2| Arabidopsis thaliana ATR2 AT4G30210 (ATR2)... 68 4e-009
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 66 2e-008
emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome... 66 2e-008
emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosom... 66 2e-008
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 66 2e-008
gb|BP593019.1|BP593019 BP593019 RAFL15 Arabidopsis thaliana... 62 3e-007
gb|AV523825.1|AV523825 AV523825 Arabidopsis thaliana aboveg... 60 1e-006
gb|BP617837.1|BP617837 BP617837 RAFL16 Arabidopsis thaliana... 60 1e-006
emb|BX827591.1|CNS0A2CR Arabidopsis thaliana Full-length cD... 60 1e-006
gb|BP797124.1|BP797124 BP797124 RAFL14 Arabidopsis thaliana... 56 2e-005
gb|BP652552.1|BP652552 BP652552 RAFL19 Arabidopsis thaliana... 54 6e-005
gb|AQ958450.1|AQ958450 LERAX59TR LERA Arabidopsis thaliana ... 52 3e-004
gb|AV782510.1|AV782510 AV782510 RAFL4 Arabidopsis thaliana ... 52 3e-004
gb|AV522409.1|AV522409 AV522409 Arabidopsis thaliana aboveg... 52 3e-004
gb|AV525093.1|AV525093 AV525093 Arabidopsis thaliana aboveg... 46 0.016
gb|AQ958449.1|AQ958449 LERAX59TF LERA Arabidopsis thaliana ... 44 0.062
gb|AI998551.1|AI998551 701546136 A. thaliana, Columbia Col-... 44 0.062
gb|AV793353.1|AV793353 AV793353 RAFL8 Arabidopsis thaliana ... 44 0.062
gb|AV798812.1|AV798812 AV798812 RAFL9 Arabidopsis thaliana ... 44 0.062
gb|AV802084.1|AV802084 AV802084 RAFL9 Arabidopsis thaliana ... 44 0.062
gb|AV803509.1|AV803509 AV803509 RAFL9 Arabidopsis thaliana ... 44 0.062
gb|AV807989.1|AV807989 AV807989 RAFL9 Arabidopsis thaliana ... 44 0.062
gb|AV808262.1|AV808262 AV808262 RAFL9 Arabidopsis thaliana ... 44 0.062
gb|AV817121.1|AV817121 AV817121 RAFL9 Arabidopsis thaliana ... 44 0.062
gb|AV562632.1|AV562632 AV562632 Arabidopsis thaliana green ... 44 0.062
gb|CF774144.1|CF774144 AG_FSL_28B03 Arabidopsis ag-1 35S:AG... 44 0.062
emb|AL109796.1|ATF9N11 Arabidopsis thaliana DNA chromosome ... 44 0.062
emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosom... 44 0.062
gb|CL514988.1|CL514988 SAIL_894_H08.v2 SAIL Collection Arab... 42 0.25
gb|CB258849.1|CB258849 12-E011080-014-003-G03-T7R MPIZ-ADIS... 42 0.25
gb|BX835298.1|BX835298 BX835298 Arabidopsis thaliana Flower... 42 0.25
>emb|A75959.1| Sequence 1 from Patent WO9321326
Length = 2114
Score = 77.8 bits (39), Expect = 4e-012
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 148 cctgctggaaaggatgagtattctcaatggataactgctagtcagaggagtcttcttgaa 207
|||| ||||||||||||||| || |||||||| ||| |||||||| |||||| | ||
Sbjct: 1308 cctgatggaaaggatgagtactcacaatggattgttgcaagtcagagaagtcttttagag 1367
Query: 208 gttatggctgcattcccttcagctaagccaccactgggagtgtttttcgcagcaatagct 267
|| |||||||| || || || || || || ||||| || || ||||| || |||||||||
Sbjct: 1368 gtgatggctgcttttccatctgcaaaacccccactaggtgtattttttgctgcaatagct 1427
Query: 268 cctcgtctgcaaccacgatactactcaatttcatc 302
|||||||| ||||| || |||||||| || |||||
Sbjct: 1428 cctcgtctacaacctcgttactactccatctcatc 1462
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 1680 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 1739
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 1740 gatggagaagaact 1753
>gb|AY054688.1| Arabidopsis thaliana NADPH-ferrihemoprotein reductase ATR1
(At4g24520; F22K18.280) mRNA, complete cds
Length = 2340
Score = 77.8 bits (39), Expect = 4e-012
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 148 cctgctggaaaggatgagtattctcaatggataactgctagtcagaggagtcttcttgaa 207
|||| ||||||||||||||| || |||||||| ||| |||||||| |||||| | ||
Sbjct: 1362 cctgatggaaaggatgagtactcacaatggattgttgcaagtcagagaagtcttttagag 1421
Query: 208 gttatggctgcattcccttcagctaagccaccactgggagtgtttttcgcagcaatagct 267
|| |||||||| || || || || || || ||||| || || ||||| || |||||||||
Sbjct: 1422 gtgatggctgcttttccatctgcaaaacccccactaggtgtattttttgctgcaatagct 1481
Query: 268 cctcgtctgcaaccacgatactactcaatttcatc 302
|||||||| ||||| || |||||||| || |||||
Sbjct: 1482 cctcgtctacaacctcgttactactccatctcatc 1516
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 1734 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 1793
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 1794 gatggagaagaact 1807
>gb|BT008426.1| Arabidopsis thaliana At4g24520 gene, complete cds
Length = 2079
Score = 77.8 bits (39), Expect = 4e-012
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 148 cctgctggaaaggatgagtattctcaatggataactgctagtcagaggagtcttcttgaa 207
|||| ||||||||||||||| || |||||||| ||| |||||||| |||||| | ||
Sbjct: 1273 cctgatggaaaggatgagtactcacaatggattgttgcaagtcagagaagtcttttagag 1332
Query: 208 gttatggctgcattcccttcagctaagccaccactgggagtgtttttcgcagcaatagct 267
|| |||||||| || || || || || || ||||| || || ||||| || |||||||||
Sbjct: 1333 gtgatggctgcttttccatctgcaaaacccccactaggtgtattttttgctgcaatagct 1392
Query: 268 cctcgtctgcaaccacgatactactcaatttcatc 302
|||||||| ||||| || |||||||| || |||||
Sbjct: 1393 cctcgtctacaacctcgttactactccatctcatc 1427
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 1645 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 1704
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 1705 gatggagaagaact 1718
>emb|BX827429.1|CNS0A2GR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS53ZF02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2343
Score = 77.8 bits (39), Expect = 4e-012
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 148 cctgctggaaaggatgagtattctcaatggataactgctagtcagaggagtcttcttgaa 207
|||| ||||||||||||||| || |||||||| ||| |||||||| |||||| | ||
Sbjct: 1341 cctgatggaaaggatgagtactcacaatggattgttgcaagtcagagaagtcttttagag 1400
Query: 208 gttatggctgcattcccttcagctaagccaccactgggagtgtttttcgcagcaatagct 267
|| |||||||| || || || || || || ||||| || || ||||| || |||||||||
Sbjct: 1401 gtgatggctgcttttccatctgcaaaacccccactaggtgtattttttgctgcaatagct 1460
Query: 268 cctcgtctgcaaccacgatactactcaatttcatc 302
|||||||| ||||| || |||||||| || |||||
Sbjct: 1461 cctcgtctacaacctcgttactactccatctcatc 1495
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 1713 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 1772
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 1773 gatggagaagaact 1786
>emb|X66016.1|ATATR1G A.thaliana ATR1 mRNA for NADPH-cytochrome P450 reductase
Length = 2199
Score = 77.8 bits (39), Expect = 4e-012
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 148 cctgctggaaaggatgagtattctcaatggataactgctagtcagaggagtcttcttgaa 207
|||| ||||||||||||||| || |||||||| ||| |||||||| |||||| | ||
Sbjct: 1342 cctgatggaaaggatgagtactcacaatggattgttgcaagtcagagaagtcttttagag 1401
Query: 208 gttatggctgcattcccttcagctaagccaccactgggagtgtttttcgcagcaatagct 267
|| |||||||| || || || || || || ||||| || || ||||| || |||||||||
Sbjct: 1402 gtgatggctgcttttccatctgcaaaacccccactaggtgtattttttgctgcaatagct 1461
Query: 268 cctcgtctgcaaccacgatactactcaatttcatc 302
|||||||| ||||| || |||||||| || |||||
Sbjct: 1462 cctcgtctacaacctcgttactactccatctcatc 1496
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 1714 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 1773
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 1774 gatggagaagaact 1787
>ref|NM_118585.2| Arabidopsis thaliana ATR1 (ARABIDOPSIS CYTOCHROME REDUCTASE)
AT4G24520 (ATR1) mRNA, complete cds
Length = 2392
Score = 77.8 bits (39), Expect = 4e-012
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 148 cctgctggaaaggatgagtattctcaatggataactgctagtcagaggagtcttcttgaa 207
|||| ||||||||||||||| || |||||||| ||| |||||||| |||||| | ||
Sbjct: 1362 cctgatggaaaggatgagtactcacaatggattgttgcaagtcagagaagtcttttagag 1421
Query: 208 gttatggctgcattcccttcagctaagccaccactgggagtgtttttcgcagcaatagct 267
|| |||||||| || || || || || || ||||| || || ||||| || |||||||||
Sbjct: 1422 gtgatggctgcttttccatctgcaaaacccccactaggtgtattttttgctgcaatagct 1481
Query: 268 cctcgtctgcaaccacgatactactcaatttcatc 302
|||||||| ||||| || |||||||| || |||||
Sbjct: 1482 cctcgtctacaacctcgttactactccatctcatc 1516
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 1734 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 1793
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 1794 gatggagaagaact 1807
>dbj|AK222148.1| Arabidopsis thaliana mRNA for NADPH-ferrihemoprotein reductase,
complete cds, clone: RAFL23-02-D15
Length = 677
Score = 69.9 bits (35), Expect = 1e-009
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 132 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 191
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||||| || | ||| |||||||||||
Sbjct: 192 atggacaaggcttctgatatctggaatatgatctcaa--ggagcttatttatatgtttgt 249
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 250 ggtgacgccaaaggcatggcaagagatgttcaca 283
>gb|BE844735.1|BE844735 AD01F06T7 AD A. thaliana (Col-0 gl1) library enriched for
salt-induced transcripts; 10-14 day seedlings; 4h 160mM
NaCl stress Arabidopsis thaliana cDNA clone AD01F06
similar to S21531 NADPH--ferrihemoprotein reductase (EC
1.6.2.4) ATR2, mRNA sequence
Length = 684
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 524 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 465
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 464 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 405
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 404 ggtgacgccaaaggcatggcaagagatgttcaca 371
>gb|AV806552.1|AV806552 AV806552 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-47-A18 3',
mRNA sequence
Length = 405
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 330 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 271
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 270 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 211
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 210 ggtgacgccaaaggcatggcaagagatgttcaca 177
>gb|CB259345.1|CB259345 61-E9535-013-002-I15-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770I152Q 5-PRIME, mRNA sequence
Length = 618
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 168 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 227
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 228 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 287
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 288 ggtgacgccaaaggcatggcaagagatgttcaca 321
>gb|AV538942.1|AV538942 AV538942 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ124e10F 3', mRNA sequence
Length = 600
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 538 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 479
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 478 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 419
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 418 ggtgacgccaaaggcatggcaagagatgttcaca 385
>gb|AV544567.1|AV544567 AV544567 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ48c03F 3', mRNA sequence
Length = 669
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 511 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 452
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 451 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 392
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 391 ggtgacgccaaaggcatggcaagagatgttcaca 358
>gb|BP603541.1|BP603541 BP603541 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-59-B19 3',
mRNA sequence
Length = 406
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 362 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 303
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 302 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 243
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 242 ggtgacgccaaaggcatggcaagagatgttcaca 209
>gb|CB252987.1|CB252987 12-E015330-019-005-G03-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768G035Q 5-PRIME, mRNA sequence
Length = 668
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 217 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 276
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 277 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 336
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 337 ggtgacgccaaaggcatggcaagagatgttcaca 370
>gb|BP792144.1|BP792144 BP792144 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-50-J16 3',
mRNA sequence
Length = 406
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 333 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 274
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 273 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 214
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 213 ggtgacgccaaaggcatggcaagagatgttcaca 180
>emb|A75961.1| Sequence 3 from Patent WO9321326
Length = 2423
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 2006 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 2065
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 2066 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 2125
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 2126 ggtgacgccaaaggcatggcaagagatgttcaca 2159
>gb|AF367288.1|AF367288 Arabidopsis thaliana AT4g30210/F9N11_60 mRNA, complete cds
Length = 2312
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 1774 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 1833
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 1834 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 1893
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 1894 ggtgacgccaaaggcatggcaagagatgttcaca 1927
>gb|AY059162.1| Arabidopsis thaliana AT4g30210/F9N11_60 mRNA, complete cds
Length = 1023
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 760 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 819
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 820 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 879
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 880 ggtgacgccaaaggcatggcaagagatgttcaca 913
>gb|AF325101.1|AF325101 Arabidopsis thaliana NADPH-ferrihemoprotein reductase (ATR2)
(F9N11.60) mRNA, complete cds
Length = 2136
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 1873 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 1932
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 1933 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 1992
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 1993 ggtgacgccaaaggcatggcaagagatgttcaca 2026
>emb|AX506108.1| Sequence 803 from Patent WO0216655
Length = 2136
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 1873 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 1932
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 1933 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 1992
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 1993 ggtgacgccaaaggcatggcaagagatgttcaca 2026
>emb|AX651759.1| Sequence 605 from Patent WO03000898
Length = 2136
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 1873 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 1932
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 1933 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 1992
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 1993 ggtgacgccaaaggcatggcaagagatgttcaca 2026
>emb|X66017.1|ATATR2M A.thaliana mRNA ATR2 for NADPH-cytochrome P450 reductase
Length = 2290
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 1926 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 1985
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 1986 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 2045
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 2046 ggtgacgccaaaggcatggcaagagatgttcaca 2079
>ref|NM_179141.1| Arabidopsis thaliana ATR2 AT4G30210 (ATR2) transcript variant
AT4G30210.1 mRNA, complete cds
Length = 2704
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 2009 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 2068
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 2069 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 2128
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 2129 ggtgacgccaaaggcatggcaagagatgttcaca 2162
>ref|NM_119167.2| Arabidopsis thaliana ATR2 AT4G30210 (ATR2) transcript variant
AT4G30210.2 mRNA, complete cds
Length = 2615
Score = 67.9 bits (34), Expect = 4e-009
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 2009 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 2068
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 2069 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 2128
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 2129 ggtgacgccaaaggcatggcaagagatgttcaca 2162
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 65.9 bits (33), Expect = 2e-008
Identities = 117/145 (80%)
Strand = Plus / Minus
Query: 158 aggatgagtattctcaatggataactgctagtcagaggagtcttcttgaagttatggctg 217
|||||||||| || |||||||| ||| |||||||| |||||| | || || |||||||
Sbjct: 8577061 aggatgagtactcacaatggattgttgcaagtcagagaagtcttttagaggtgatggctg 8577002
Query: 218 cattcccttcagctaagccaccactgggagtgtttttcgcagcaatagctcctcgtctgc 277
| || || || || || || ||||| || || ||||| || ||||||||||||||||| |
Sbjct: 8577001 cttttccatctgcaaaacccccactaggtgtattttttgctgcaatagctcctcgtctac 8576942
Query: 278 aaccacgatactactcaatttcatc 302
|||| || |||||||| || |||||
Sbjct: 8576941 aacctcgttactactccatctcatc 8576917
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 8576530 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 8576471
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 8576470 gatggagaagaact 8576457
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 10713111 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 10713156
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project)
Length = 125803
Score = 65.9 bits (33), Expect = 2e-008
Identities = 117/145 (80%)
Strand = Plus / Plus
Query: 158 aggatgagtattctcaatggataactgctagtcagaggagtcttcttgaagttatggctg 217
|||||||||| || |||||||| ||| |||||||| |||||| | || || |||||||
Sbjct: 116913 aggatgagtactcacaatggattgttgcaagtcagagaagtcttttagaggtgatggctg 116972
Query: 218 cattcccttcagctaagccaccactgggagtgtttttcgcagcaatagctcctcgtctgc 277
| || || || || || || ||||| || || ||||| || ||||||||||||||||| |
Sbjct: 116973 cttttccatctgcaaaacccccactaggtgtattttttgctgcaatagctcctcgtctac 117032
Query: 278 aaccacgatactactcaatttcatc 302
|||| || |||||||| || |||||
Sbjct: 117033 aacctcgttactactccatctcatc 117057
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 117444 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 117503
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 117504 gatggagaagaact 117517
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
Length = 198402
Score = 65.9 bits (33), Expect = 2e-008
Identities = 117/145 (80%)
Strand = Plus / Minus
Query: 158 aggatgagtattctcaatggataactgctagtcagaggagtcttcttgaagttatggctg 217
|||||||||| || |||||||| ||| |||||||| |||||| | || || |||||||
Sbjct: 131997 aggatgagtactcacaatggattgttgcaagtcagagaagtcttttagaggtgatggctg 131938
Query: 218 cattcccttcagctaagccaccactgggagtgtttttcgcagcaatagctcctcgtctgc 277
| || || || || || || ||||| || || ||||| || ||||||||||||||||| |
Sbjct: 131937 cttttccatctgcaaaacccccactaggtgtattttttgctgcaatagctcctcgtctac 131878
Query: 278 aaccacgatactactcaatttcatc 302
|||| || |||||||| || |||||
Sbjct: 131877 aacctcgttactactccatctcatc 131853
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 131466 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 131407
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 131406 gatggagaagaact 131393
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 65.9 bits (33), Expect = 2e-008
Identities = 117/145 (80%)
Strand = Plus / Minus
Query: 158 aggatgagtattctcaatggataactgctagtcagaggagtcttcttgaagttatggctg 217
|||||||||| || |||||||| ||| |||||||| |||||| | || || |||||||
Sbjct: 12664299 aggatgagtactcacaatggattgttgcaagtcagagaagtcttttagaggtgatggctg 12664240
Query: 218 cattcccttcagctaagccaccactgggagtgtttttcgcagcaatagctcctcgtctgc 277
| || || || || || || ||||| || || ||||| || ||||||||||||||||| |
Sbjct: 12664239 cttttccatctgcaaaacccccactaggtgtattttttgctgcaatagctcctcgtctac 12664180
Query: 278 aaccacgatactactcaatttcatc 302
|||| || |||||||| || |||||
Sbjct: 12664179 aacctcgttactactccatctcatc 12664155
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 12663768 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 12663709
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 12663708 gatggagaagaact 12663695
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 14800340 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 14800385
>gb|BP593019.1|BP593019 BP593019 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-20-H08 3',
mRNA sequence
Length = 395
Score = 61.9 bits (31), Expect = 3e-007
Identities = 112/139 (80%)
Strand = Plus / Minus
Query: 706 ttctctcgggaagggccaacgaaagaatatgtgcagcataagatggtggaaaaggccaca 765
|||||||| ||||| || || |||||||| || ||||| |||||| |||| ||||| |
Sbjct: 374 ttctctcgtgaaggacccaccaaagaatacgtacagcacaagatgatggacaaggcttct 315
Query: 766 gatatttggaacatcatctcaaatggtggttacttatatgtttgcggtgatgccaaggga 825
||||| ||||| || ||||| | || | ||| ||||||||||| ||||| ||||| ||
Sbjct: 314 gatatctggaatatgatctctcaaggagcttatttatatgtttgtggtgacgccaaaggc 255
Query: 826 atggctagagatgtacaca 844
||||| |||||||| ||||
Sbjct: 254 atggcaagagatgttcaca 236
>gb|AV523825.1|AV523825 AV523825 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL41b06F 3', mRNA
sequence
Length = 624
Score = 60.0 bits (30), Expect = 1e-006
Identities = 123/154 (79%)
Strand = Plus / Minus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || | |||||||| || ||||| ||||||
Sbjct: 353 gagctaagtgtcgccttctctcgtgaaggaccccccaaagaatacgtacagcacaagatg 294
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 293 atggacaaggcttctgatatctggaatatgatctctcaaggagcttatttatatgtttgt 234
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 233 ggtgacgccaaaggcatggcaagagatgttcaca 200
>gb|BP617837.1|BP617837 BP617837 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-25-L18 3',
mRNA sequence
Length = 438
Score = 60.0 bits (30), Expect = 1e-006
Identities = 124/154 (80%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 345 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 286
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | ||| |||||||||||
Sbjct: 285 atggacaaggcttctgatatctggaatatgatctctca-ggagcttatttatatgtttgt 227
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 226 ggtgacgccaaaggcatggcaagagatgttcaca 193
>emb|BX827591.1|CNS0A2CR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS7ZC12 of Adult vegetative tissue of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 2362
Score = 60.0 bits (30), Expect = 1e-006
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| || || |||||||| || ||||| ||||||
Sbjct: 1999 gagctaagtgtcgccttctctcgtgaaggacccaccaaagaatacgtacagcacaagatg 2058
Query: 751 gtggaaaaggccacagatatttggaacatcatctcaaatggtggttacttatatgtttgc 810
|||| ||||| | ||||| ||||| || ||||| | || | | | |||||||||||
Sbjct: 2059 atggacaaggcttctgatatctggaatatgatctctcaaggagctcatttatatgtttgt 2118
Query: 811 ggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 2119 ggtgacgccaaaggcatggcaagagatgttcaca 2152
>gb|BP797124.1|BP797124 BP797124 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-02-D15 5',
mRNA sequence
Length = 413
Score = 56.0 bits (28), Expect = 2e-005
Identities = 126/155 (81%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 691 gagctaattgttgcattctctcgggaagggccaacgaaagaatatgtgcagcataagatg 750
||||||| ||| || |||||||| ||||| ||| | |||||||| || ||||| ||||||
Sbjct: 131 gagctaagtgtcgccttctctcgtgaaggaccacc-aaagaatacgtacagcacaagatg 189
Query: 751 gtggaaaaggcca-cagatatttggaacatcatctcaaatggtggttacttatatgtttg 809
|||| |||||| | ||||| ||||| || ||||||| || | ||| |||||||||||
Sbjct: 190 atggacaaggccttctgatatctggaatatgatctcaa--ggagcttatttatatgtttg 247
Query: 810 cggtgatgccaagggaatggctagagatgtacaca 844
||||| ||||| || ||||| |||||||| ||||
Sbjct: 248 tggtgacgccaaaggcatggcaagagatgtccaca 282
>gb|BP652552.1|BP652552 BP652552 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-93-I04 3',
mRNA sequence
Length = 394
Score = 54.0 bits (27), Expect = 6e-005
Identities = 111/139 (79%)
Strand = Plus / Minus
Query: 706 ttctctcgggaagggccaacgaaagaatatgtgcagcataagatggtggaaaaggccaca 765
|||||||| ||||| || || |||||||| || ||||| |||||| |||| ||||| |
Sbjct: 329 ttctctcgtgaaggacccaccaaagaatacgtacagcacaagatgatggacaaggcttct 270
Query: 766 gatatttggaacatcatctcaaatggtggttacttatatgtttgcggtgatgccaaggga 825
||||| ||||| || ||||| | || | ||| ||||||||||| ||||| |||| ||
Sbjct: 269 gatatctggaatatgatctctcaaggagcttatttatatgtttgtggtgaccccaaaggc 210
Query: 826 atggctagagatgtacaca 844
||||| |||||||| ||||
Sbjct: 209 atggcaagagatgttcaca 191
>gb|AQ958450.1|AQ958450 LERAX59TR LERA Arabidopsis thaliana genomic clone LERAX59, DNA
sequence
Length = 624
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 185 cctgggactgggctggcaccttttagaggttttctgcaggaaaggatggcactaaaagaa 244
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 245 gatggagaagaact 258
>gb|AV782510.1|AV782510 AV782510 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-18-D10 3',
mRNA sequence
Length = 626
Score = 52.0 bits (26), Expect = 3e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| ||||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 601 cctgggactgggctggccccttttagaggttttctgcaggaaaggatggcactaaaagaa 542
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 541 gatggagaagaact 528
>gb|AV522409.1|AV522409 AV522409 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ79b08F 3', mRNA
sequence
Length = 498
Score = 52.0 bits (26), Expect = 3e-004
Identities = 95/118 (80%)
Strand = Plus / Minus
Query: 727 aaagaatatgtgcagcataagatggtggaaaaggccacagatatttggaacatcatctca 786
|||||||| || ||||| |||||| |||| ||||| | ||||| ||||| || |||||
Sbjct: 483 aaagaatacgtacagcacaagatgatggacaaggcttctgatatctggaatatgatctct 424
Query: 787 aatggtggttacttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
| || | ||| ||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 423 caaggagcttatttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 366
>gb|AV525093.1|AV525093 AV525093 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD17c09R 5', mRNA
sequence
Length = 382
Score = 46.1 bits (23), Expect = 0.016
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 148 cctgctggaaaggatgagtattctcaatggataactgctagtcagaggagtcttcttgaa 207
|||| ||||||||||||||| || |||||||| ||| |||||||| |||||| | ||
Sbjct: 266 cctgatggaaaggatgagtactcacaatggattgttgcaagtcagagaagtcttttagag 325
Query: 208 gttatggctgc 218
|| ||||||||
Sbjct: 326 gtgatggctgc 336
>gb|AQ958449.1|AQ958449 LERAX59TF LERA Arabidopsis thaliana genomic clone LERAX59, DNA
sequence
Length = 746
Score = 44.1 bits (22), Expect = 0.062
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 520 cctgggacagggctggctccttttagaggcttcttgcaggaaaggttagcactgaaacaa 579
|||||||| |||||||| | ||||||||| || ||||||||||| | ||||| ||| ||
Sbjct: 724 cctgggactgggctggcactttttagaggttttctgcaggaaaggatggcactaaaagaa 665
Query: 580 tctggagcagaact 593
||||| ||||||
Sbjct: 664 gatggagaagaact 651
>gb|AI998551.1|AI998551 701546136 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701546136, mRNA sequence
Length = 577
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 557 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 512
>gb|AV793353.1|AV793353 AV793353 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-08-C15 3',
mRNA sequence
Length = 449
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 427 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 382
>gb|AV798812.1|AV798812 AV798812 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-17-K05 3',
mRNA sequence
Length = 430
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 430 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 385
>gb|AV802084.1|AV802084 AV802084 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-30-K03 3',
mRNA sequence
Length = 378
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 282 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 237
>gb|AV803509.1|AV803509 AV803509 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-35-M13 3',
mRNA sequence
Length = 415
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 391 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 346
>gb|AV807989.1|AV807989 AV807989 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-52-N05 3',
mRNA sequence
Length = 420
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 399 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 354
>gb|AV808262.1|AV808262 AV808262 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-53-O13 3',
mRNA sequence
Length = 427
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 427 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 382
>gb|AV817121.1|AV817121 AV817121 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-93-D23 3',
mRNA sequence
Length = 397
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 347 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 302
>gb|AV562632.1|AV562632 AV562632 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ173b11F 3', mRNA sequence
Length = 430
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 418 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 373
>gb|CF774144.1|CF774144 AG_FSL_28B03 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 28B03, mRNA sequence
Length = 248
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 187 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 142
>emb|AL109796.1|ATF9N11 Arabidopsis thaliana DNA chromosome 4, BAC clone F9N11
Length = 87635
Score = 44.1 bits (22), Expect = 0.062
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 799 ttatatgtttgcggtgatgccaagggaatggctagagatgtacaca 844
||||||||||| ||||| ||||| || ||||| |||||||| ||||
Sbjct: 66964 ttatatgtttgtggtgacgccaaaggcatggcaagagatgttcaca 67009
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 687,951
Number of Sequences: 1013581
Number of extensions: 687951
Number of successful extensions: 48253
Number of sequences better than 0.5: 55
Number of HSP's better than 0.5 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47227
Number of HSP's gapped (non-prelim): 1026
length of query: 1340
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1320
effective length of database: 888,669,252
effective search space: 1173043412640
effective search space used: 1173043412640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)