BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2193041.2.1
(877 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_130325.1| Arabidopsis thaliana structural constituen... 94 5e-017
gb|BP595871.1|BP595871 BP595871 RAFL15 Arabidopsis thaliana... 76 1e-011
gb|CW846933.1|CW846933 GT13815.Ds5.01.29.2004.jx50.577 Arab... 68 3e-009
gb|CW846934.1|CW846934 GT13816.Ds5.01.29.2004.jx50.782 Arab... 68 3e-009
gb|AW004212.1|AW004212 701549078 A. thaliana, Columbia Col-... 68 3e-009
gb|AV782778.1|AV782778 AV782778 RAFL5 Arabidopsis thaliana ... 68 3e-009
gb|AV785594.1|AV785594 AV785594 RAFL6 Arabidopsis thaliana ... 68 3e-009
gb|AV789045.1|AV789045 AV789045 RAFL6 Arabidopsis thaliana ... 68 3e-009
gb|AV792990.1|AV792990 AV792990 RAFL7 Arabidopsis thaliana ... 68 3e-009
gb|AV798876.1|AV798876 AV798876 RAFL9 Arabidopsis thaliana ... 68 3e-009
gb|AV811194.1|AV811194 AV811194 RAFL9 Arabidopsis thaliana ... 68 3e-009
gb|AV812697.1|AV812697 AV812697 RAFL9 Arabidopsis thaliana ... 68 3e-009
gb|AV822119.1|AV822119 AV822119 RAFL5 Arabidopsis thaliana ... 68 3e-009
gb|CA781829.1|CA781829 051E12AF Infected Arabidopsis Leaf A... 68 3e-009
gb|CB264110.1|CB264110 91-E014993-035-003-E23-T7R MPIZ-ADIS... 68 3e-009
gb|AV538046.1|AV538046 AV538046 Arabidopsis thaliana roots ... 68 3e-009
gb|AV543075.1|AV543075 AV543075 Arabidopsis thaliana roots ... 68 3e-009
gb|BP574755.1|BP574755 BP574755 RAFL14 Arabidopsis thaliana... 68 3e-009
gb|BP582516.1|BP582516 BP582516 RAFL14 Arabidopsis thaliana... 68 3e-009
gb|BP586227.1|BP586227 BP586227 RAFL15 Arabidopsis thaliana... 68 3e-009
gb|BP586950.1|BP586950 BP586950 RAFL15 Arabidopsis thaliana... 68 3e-009
gb|BP587066.1|BP587066 BP587066 RAFL15 Arabidopsis thaliana... 68 3e-009
gb|BP618021.1|BP618021 BP618021 RAFL16 Arabidopsis thaliana... 68 3e-009
gb|BP626619.1|BP626619 BP626619 RAFL17 Arabidopsis thaliana... 68 3e-009
gb|BP631221.1|BP631221 BP631221 RAFL17 Arabidopsis thaliana... 68 3e-009
gb|BP643928.1|BP643928 BP643928 RAFL19 Arabidopsis thaliana... 68 3e-009
gb|BP779131.1|BP779131 BP779131 RAFL7 Arabidopsis thaliana ... 68 3e-009
gb|BP783315.1|BP783315 BP783315 RAFL7 Arabidopsis thaliana ... 68 3e-009
gb|BP795490.1|BP795490 BP795490 RAFL7 Arabidopsis thaliana ... 68 3e-009
gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribos... 68 3e-009
gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA... 68 3e-009
gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA... 68 3e-009
emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cD... 68 3e-009
emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cD... 68 3e-009
ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROT... 68 3e-009
gb|BP630836.1|BP630836 BP630836 RAFL17 Arabidopsis thaliana... 62 2e-007
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 60 7e-007
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 60 7e-007
gb|T04593.1|T04593 640 Lambda-PRL2 Arabidopsis thaliana cDN... 56 1e-005
gb|T21082.1|T21082 3090 Lambda-PRL2 Arabidopsis thaliana cD... 56 1e-005
gb|N97136.1|N97136 22315 Lambda-PRL2 Arabidopsis thaliana c... 56 1e-005
gb|T13864.1|T13864 2029 Lambda-PRL2 Arabidopsis thaliana cD... 56 1e-005
gb|BE038821.1|BE038821 AB07C09 AB Arabidopsis thaliana cDNA... 56 1e-005
gb|AV825327.1|AV825327 AV825327 RAFL7 Arabidopsis thaliana ... 56 1e-005
gb|AV827922.1|AV827922 AV827922 RAFL9 Arabidopsis thaliana ... 56 1e-005
gb|CF652057.1|CF652057 31-L020362-066-002-N08-SP6P MPIZ-ADI... 56 1e-005
gb|CF652156.1|CF652156 37-L020525-066-003-J09-SP6P MPIZ-ADI... 56 1e-005
gb|CF653073.1|CF653073 94-L020167-066-001-L24-SP6P MPIZ-ADI... 56 1e-005
gb|AV552035.1|AV552035 AV552035 Arabidopsis thaliana roots ... 56 1e-005
gb|AV552450.1|AV552450 AV552450 Arabidopsis thaliana roots ... 56 1e-005
gb|BP798204.1|BP798204 BP798204 RAFL14 Arabidopsis thaliana... 56 1e-005
gb|BP799006.1|BP799006 BP799006 RAFL14 Arabidopsis thaliana... 56 1e-005
gb|BP800537.1|BP800537 BP800537 RAFL14 Arabidopsis thaliana... 56 1e-005
gb|BP801000.1|BP801000 BP801000 RAFL14 Arabidopsis thaliana... 56 1e-005
gb|BP801399.1|BP801399 BP801399 RAFL14 Arabidopsis thaliana... 56 1e-005
gb|BP803264.1|BP803264 BP803264 RAFL14 Arabidopsis thaliana... 56 1e-005
gb|BP813190.1|BP813190 BP813190 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP813743.1|BP813743 BP813743 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP814189.1|BP814189 BP814189 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP819869.1|BP819869 BP819869 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP820622.1|BP820622 BP820622 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP822627.1|BP822627 BP822627 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP823019.1|BP823019 BP823019 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP826828.1|BP826828 BP826828 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP830636.1|BP830636 BP830636 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP831474.1|BP831474 BP831474 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP835483.1|BP835483 BP835483 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP835680.1|BP835680 BP835680 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP842649.1|BP842649 BP842649 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP843276.1|BP843276 BP843276 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP844305.1|BP844305 BP844305 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP853538.1|BP853538 BP853538 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP854674.1|BP854674 BP854674 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP854760.1|BP854760 BP854760 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP857535.1|BP857535 BP857535 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP858433.1|BP858433 BP858433 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP860180.1|BP860180 BP860180 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP864195.1|BP864195 BP864195 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP868224.1|BP868224 BP868224 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|AY056141.1| Arabidopsis thaliana putative 60S ribosomal ... 56 1e-005
gb|AY122996.1| Arabidopsis thaliana putative 60S ribosomal ... 56 1e-005
gb|BT000711.1| Arabidopsis thaliana clone RAFL09-17-C05 (R0... 56 1e-005
ref|NM_122667.2| Arabidopsis thaliana structural constituen... 56 1e-005
gb|BP594504.1|BP594504 BP594504 RAFL15 Arabidopsis thaliana... 54 4e-005
gb|BP656927.1|BP656927 BP656927 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP830020.1|BP830020 BP830020 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP852019.1|BP852019 BP852019 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|T88582.1|T88582 12278 Lambda-PRL2 Arabidopsis thaliana c... 50 7e-004
gb|CB254873.1|CB254873 57-E018361-019-007-A16-T7R MPIZ-ADIS... 50 7e-004
gb|BP804604.1|BP804604 BP804604 RAFL16 Arabidopsis thaliana... 50 7e-004
gb|BP817272.1|BP817272 BP817272 RAFL19 Arabidopsis thaliana... 50 7e-004
gb|BP819871.1|BP819871 BP819871 RAFL19 Arabidopsis thaliana... 50 7e-004
gb|BP851600.1|BP851600 BP851600 RAFL21 Arabidopsis thaliana... 50 7e-004
gb|BP859852.1|BP859852 BP859852 RAFL21 Arabidopsis thaliana... 50 7e-004
gb|B24608.1|B24608 F21A19TF IGF Arabidopsis thaliana genomi... 48 0.003
gb|BP602398.1|BP602398 BP602398 RAFL16 Arabidopsis thaliana... 48 0.003
gb|BP803757.1|BP803757 BP803757 RAFL14 Arabidopsis thaliana... 48 0.003
gb|BP848292.1|BP848292 BP848292 RAFL21 Arabidopsis thaliana... 48 0.003
gb|BP851981.1|BP851981 BP851981 RAFL21 Arabidopsis thaliana... 48 0.003
gb|BP868924.1|BP868924 BP868924 RAFL21 Arabidopsis thaliana... 48 0.003
gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from... 48 0.003
gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J2... 48 0.003
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 48 0.003
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 48 0.003
gb|BP809195.1|BP809195 BP809195 RAFL16 Arabidopsis thaliana... 46 0.010
gb|BP827616.1|BP827616 BP827616 RAFL19 Arabidopsis thaliana... 46 0.010
gb|BP868414.1|BP868414 BP868414 RAFL21 Arabidopsis thaliana... 46 0.010
gb|BZ594975.1|BZ594975 SALK_085460.48.75.x Arabidopsis thal... 44 0.040
gb|BZ766942.1|BZ766942 SALK_138088.39.90.n Arabidopsis thal... 44 0.040
gb|BP796897.1|BP796897 BP796897 RAFL14 Arabidopsis thaliana... 42 0.16
gb|BP802761.1|BP802761 BP802761 RAFL14 Arabidopsis thaliana... 42 0.16
gb|BP812235.1|BP812235 BP812235 RAFL19 Arabidopsis thaliana... 42 0.16
gb|BP824901.1|BP824901 BP824901 RAFL19 Arabidopsis thaliana... 42 0.16
gb|BP829227.1|BP829227 BP829227 RAFL19 Arabidopsis thaliana... 42 0.16
gb|BP861583.1|BP861583 BP861583 RAFL21 Arabidopsis thaliana... 42 0.16
>ref|NM_130325.1| Arabidopsis thaliana structural constituent of ribosome AT2G47570
mRNA, complete cds
Length = 408
Score = 93.7 bits (47), Expect = 5e-017
Identities = 159/194 (81%), Gaps = 3/194 (1%)
Strand = Plus / Plus
Query: 378 aggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttc 437
||||||||||||| || || || |||||| ||| ||||| |||||||||||||| ||
Sbjct: 148 aggttcactgagagcgctagagctaggatccacaaggctggtggagagtgcctcactttt 207
Query: 438 gaccagctcgcgc-tccgtgccccacttgggc--aaaacacggttctgctgaggggtcct 494
|| |||||||| | |||||||||||||||| | | |||||||||||||| || ||||||
Sbjct: 208 gatcagctcgctcttccgtgccccacttggtcagagaacacggttctgcttagaggtcct 267
Query: 495 aagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccac 554
|||||| | | ||||| || | |||||| || || || || || |||||||||||||||
Sbjct: 268 aagaacacacgtgaagcagtgaagcactttggaccagctcctggtgtgcctcacagccac 327
Query: 555 accaagccttatgt 568
||||| || |||||
Sbjct: 328 accaaaccgtatgt 341
>gb|BP595871.1|BP595871 BP595871 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-31-N02 3',
mRNA sequence
Length = 450
Score = 75.8 bits (38), Expect = 1e-011
Identities = 147/182 (80%), Gaps = 1/182 (0%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| |||||| |||||||||||| || || ||
Sbjct: 384 acctttgaccagctcgctctcagagctcca-ttgggccaaacacggttcttcttagagga 326
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 325 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 266
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 265 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 206
Query: 612 aa 613
||
Sbjct: 205 aa 204
>gb|CW846933.1|CW846933 GT13815.Ds5.01.29.2004.jx50.577 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT13815, DNA sequence
Length = 577
Score = 67.9 bits (34), Expect = 3e-009
Identities = 86/102 (84%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 378 aggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttc 437
||||||||||||| ||| || || |||||| | | ||||| |||||||||||||| ||
Sbjct: 441 aggttcactgagagagctagagctaggatccaccaggctggtggagagtgcctcactttt 382
Query: 438 gaccagctcgcgc-tccgtgccccacttgggcaaaacacggt 478
|| |||||||| | |||||||||||||||| || ||||||||
Sbjct: 381 gatcagctcgctcttccgtgccccacttggtcagaacacggt 340
>gb|CW846934.1|CW846934 GT13816.Ds5.01.29.2004.jx50.782 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT13816, DNA sequence
Length = 782
Score = 67.9 bits (34), Expect = 3e-009
Identities = 86/102 (84%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 378 aggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttc 437
||||||||||||| ||| || || |||||| | | ||||| |||||||||||||| ||
Sbjct: 445 aggttcactgagagagctagagctaggatccaccaggctggtggagagtgcctcactttt 386
Query: 438 gaccagctcgcgc-tccgtgccccacttgggcaaaacacggt 478
|| |||||||| | |||||||||||||||| || ||||||||
Sbjct: 385 gatcagctcgctcttccgtgccccacttggtcagaacacggt 344
>gb|AW004212.1|AW004212 701549078 A. thaliana, Columbia Col-0, inflorescence-2 Arabidopsis
thaliana cDNA clone 701549078, mRNA sequence
Length = 578
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 362 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 303
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 302 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 243
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 242 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 183
Query: 612 aa 613
||
Sbjct: 182 aa 181
>gb|AV782778.1|AV782778 AV782778 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-01-F21 3',
mRNA sequence
Length = 687
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 403 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 344
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 343 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 284
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 283 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 224
Query: 612 aa 613
||
Sbjct: 223 aa 222
>gb|AV785594.1|AV785594 AV785594 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-67-H22 3',
mRNA sequence
Length = 427
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 378 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 319
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 318 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 259
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 258 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 199
Query: 612 aa 613
||
Sbjct: 198 aa 197
>gb|AV789045.1|AV789045 AV789045 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-81-P20 3',
mRNA sequence
Length = 411
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 392 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 333
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 332 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 273
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 272 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 213
Query: 612 aa 613
||
Sbjct: 212 aa 211
>gb|AV792990.1|AV792990 AV792990 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-17-K01 3',
mRNA sequence
Length = 431
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 427 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 368
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 367 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 308
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 307 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 248
Query: 612 aa 613
||
Sbjct: 247 aa 246
>gb|AV798876.1|AV798876 AV798876 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-17-N16 3',
mRNA sequence
Length = 429
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 378 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 319
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 318 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 259
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 258 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 199
Query: 612 aa 613
||
Sbjct: 198 aa 197
>gb|AV811194.1|AV811194 AV811194 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-67-D04 3',
mRNA sequence
Length = 415
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 387 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 328
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 327 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 268
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 267 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 208
Query: 612 aa 613
||
Sbjct: 207 aa 206
>gb|AV812697.1|AV812697 AV812697 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-74-P20 3',
mRNA sequence
Length = 389
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 384 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 325
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 324 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 265
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 264 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 205
Query: 612 aa 613
||
Sbjct: 204 aa 203
>gb|AV822119.1|AV822119 AV822119 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-01-F21 5',
mRNA sequence
Length = 660
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 393 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 452
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 453 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 512
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 513 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 572
Query: 612 aa 613
||
Sbjct: 573 aa 574
>gb|CA781829.1|CA781829 051E12AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 725
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 355 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 414
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 415 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 474
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 475 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 534
Query: 612 aa 613
||
Sbjct: 535 aa 536
>gb|CB264110.1|CB264110 91-E014993-035-003-E23-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000E233Q 5-PRIME, mRNA sequence
Length = 705
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 373 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 432
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 433 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 492
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 493 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 552
Query: 612 aa 613
||
Sbjct: 553 aa 554
>gb|AV538046.1|AV538046 AV538046 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109e04F 3', mRNA sequence
Length = 560
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 443 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 384
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 383 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 324
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 323 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 264
Query: 612 aa 613
||
Sbjct: 263 aa 262
>gb|AV543075.1|AV543075 AV543075 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ196h10F 3', mRNA sequence
Length = 449
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 338 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 279
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 278 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 219
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 218 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 159
Query: 612 aa 613
||
Sbjct: 158 aa 157
>gb|BP574755.1|BP574755 BP574755 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-89-G15 3',
mRNA sequence
Length = 401
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 352 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 293
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 292 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 233
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 232 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 173
Query: 612 aa 613
||
Sbjct: 172 aa 171
>gb|BP582516.1|BP582516 BP582516 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-J04 3',
mRNA sequence
Length = 450
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 388 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 329
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 328 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 269
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 268 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 209
Query: 612 aa 613
||
Sbjct: 208 aa 207
>gb|BP586227.1|BP586227 BP586227 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-05-H23 3',
mRNA sequence
Length = 460
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 333 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 274
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 273 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 214
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 213 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 154
Query: 612 aa 613
||
Sbjct: 153 aa 152
>gb|BP586950.1|BP586950 BP586950 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-08-D20 3',
mRNA sequence
Length = 414
Score = 67.9 bits (34), Expect = 3e-009
Identities = 146/182 (80%), Gaps = 1/182 (0%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| |||||| | |||||||||| || || ||
Sbjct: 402 acctttgaccagctcgctctcagagctcca-ttgggccagacacggttcttcttagagga 344
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 343 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 284
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 283 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 224
Query: 612 aa 613
||
Sbjct: 223 aa 222
>gb|BP587066.1|BP587066 BP587066 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-41-A17 3',
mRNA sequence
Length = 435
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 385 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 326
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 325 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 266
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 265 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 206
Query: 612 aa 613
||
Sbjct: 205 aa 204
>gb|BP618021.1|BP618021 BP618021 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-26-I19 3',
mRNA sequence
Length = 428
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 404 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 345
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 344 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 285
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 284 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 225
Query: 612 aa 613
||
Sbjct: 224 aa 223
>gb|BP626619.1|BP626619 BP626619 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-48-E16 3',
mRNA sequence
Length = 421
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 401 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 342
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 341 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 282
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 281 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 222
Query: 612 aa 613
||
Sbjct: 221 aa 220
>gb|BP631221.1|BP631221 BP631221 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-22-M18 3',
mRNA sequence
Length = 374
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 356 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 297
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 296 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 237
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 236 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 177
Query: 612 aa 613
||
Sbjct: 176 aa 175
>gb|BP643928.1|BP643928 BP643928 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-63-K11 3',
mRNA sequence
Length = 418
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 352 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 293
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 292 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 233
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 232 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 173
Query: 612 aa 613
||
Sbjct: 172 aa 171
>gb|BP779131.1|BP779131 BP779131 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-66-M18 3',
mRNA sequence
Length = 413
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 339 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 280
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 279 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 220
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 219 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 160
Query: 612 aa 613
||
Sbjct: 159 aa 158
>gb|BP783315.1|BP783315 BP783315 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-85-L04 3',
mRNA sequence
Length = 405
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 403 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 344
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 343 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 284
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 283 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 224
Query: 612 aa 613
||
Sbjct: 223 aa 222
>gb|BP795490.1|BP795490 BP795490 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-65-C05 3',
mRNA sequence
Length = 404
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 403 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 344
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 343 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 284
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 283 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 224
Query: 612 aa 613
||
Sbjct: 223 aa 222
>gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribosomal protein L18 mRNA,
complete cds
Length = 778
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 387 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 446
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 447 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 506
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 507 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 566
Query: 612 aa 613
||
Sbjct: 567 aa 568
>gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds
Length = 794
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 392 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 451
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 452 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 511
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 512 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 571
Query: 612 aa 613
||
Sbjct: 572 aa 573
>gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds
Length = 564
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 361 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 420
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 421 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 480
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 481 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 540
Query: 612 aa 613
||
Sbjct: 541 aa 542
>emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB67ZC09 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 714
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 383 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 442
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 443 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 502
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 503 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 562
Query: 612 aa 613
||
Sbjct: 563 aa 564
>emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB9ZC10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 575
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 141 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 200
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 201 cctaagaattcacgtgaagcagttaagcatttcggacctgctcctggtgtgccacacagt 260
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 261 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 320
Query: 612 aa 613
||
Sbjct: 321 aa 322
>ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROTEIN L18); structural
constituent of ribosome AT3G05590 (RPL18) mRNA, complete
cds
Length = 834
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| ||||||||||| ||| | || ||| | || || ||||||||||| || || ||
Sbjct: 392 acctttgaccagctcgctctcagagctccattgggccagaacacggttcttcttagagga 451
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| | | ||||| || | ||| ||||| ||||| || || ||||| |||||
Sbjct: 452 cctaagaattcacgtgaagcagtgaagcatttcggacctgctcctggtgtgccacacagt 511
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||| ||||||| |||||||| | ||||| |||||||| |||||||| ||||||| ||||
Sbjct: 512 cactccaagccatatgttcgggccaagggaaggaagttcgagaaggccagaggaaagagg 571
Query: 612 aa 613
||
Sbjct: 572 aa 573
>gb|BP630836.1|BP630836 BP630836 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-21-I07 3',
mRNA sequence
Length = 366
Score = 61.9 bits (31), Expect = 2e-007
Identities = 115/143 (80%)
Strand = Plus / Minus
Query: 471 aacacggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcct 530
||||||||||| || || || |||||||| | | ||||| || | ||| ||||| |||
Sbjct: 357 aacacggttcttcttagaggacctaagaattcacgtgaagcagtgaagcatttcggacct 298
Query: 531 gcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaagggtaggaagttt 590
|| || || ||||| ||||| ||| ||||||| |||||||| | ||||| ||||||||
Sbjct: 297 gctcctggtgtgccacacagtcactccaagccatatgttcgggccaagggaaggaagttc 238
Query: 591 gagaaggcgagaggaaggaggaa 613
|||||||| ||||||| ||||||
Sbjct: 237 gagaaggccagaggaaagaggaa 215
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
sequence
Length = 98937
Score = 60.0 bits (30), Expect = 7e-007
Identities = 76/90 (84%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 378 aggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttc 437
||||||||||||| || || || |||||| ||| ||||| |||||||||||||| ||
Sbjct: 32173 aggttcactgagagcgctagagctaggatccacaaggctggtggagagtgcctcactttt 32232
Query: 438 gaccagctcgcgc-tccgtgccccacttgg 466
|| |||||||| | ||||||||||||||||
Sbjct: 32233 gatcagctcgctcttccgtgccccacttgg 32262
Score = 50.1 bits (25), Expect = 7e-004
Identities = 76/93 (81%)
Strand = Plus / Plus
Query: 476 ggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcacc 535
||||||||| || |||||||||||| | | ||||| || | |||||| || || || ||
Sbjct: 32583 ggttctgcttagaggtcctaagaacacacgtgaagcagtgaagcactttggaccagctcc 32642
Query: 536 aggagtgcctcacagccacaccaagccttatgt 568
|| |||||||||||||||||||| || |||||
Sbjct: 32643 tggtgtgcctcacagccacaccaaaccgtatgt 32675
Score = 50.1 bits (25), Expect = 7e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 132 tccgacgatgtctacctcaagctcctcgtcaag 164
|||||||||||||| ||||||||||| ||||||
Sbjct: 31772 tccgacgatgtctatctcaagctccttgtcaag 31804
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 60.0 bits (30), Expect = 7e-007
Identities = 76/90 (84%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 378 aggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttc 437
||||||||||||| || || || |||||| ||| ||||| |||||||||||||| ||
Sbjct: 19523537 aggttcactgagagcgctagagctaggatccacaaggctggtggagagtgcctcactttt 19523478
Query: 438 gaccagctcgcgc-tccgtgccccacttgg 466
|| |||||||| | ||||||||||||||||
Sbjct: 19523477 gatcagctcgctcttccgtgccccacttgg 19523448
Score = 50.1 bits (25), Expect = 7e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 132 tccgacgatgtctacctcaagctcctcgtcaag 164
|||||||||||||| ||||||||||| ||||||
Sbjct: 19523938 tccgacgatgtctatctcaagctccttgtcaag 19523906
Score = 50.1 bits (25), Expect = 7e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 476 ggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcacc 535
||||||||| || |||||||||||| | | ||||| || | |||||| || || || ||
Sbjct: 19523127 ggttctgcttagaggtcctaagaacacacgtgaagcagtgaagcactttggaccagctcc 19523068
Query: 536 aggagtgcctcacagccacaccaagccttatgt 568
|| |||||||||||||||||||| || |||||
Sbjct: 19523067 tggtgtgcctcacagccacaccaaaccgtatgt 19523035
Score = 48.1 bits (24), Expect = 0.003
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaag 164
|||||||| ||||||||||||||||| |||| ||||
Sbjct: 11285692 aagtccgatgatgtctacctcaagcttctcgccaag 11285727
>gb|T04593.1|T04593 640 Lambda-PRL2 Arabidopsis thaliana cDNA clone 42H8T7, mRNA
sequence
Length = 360
Score = 56.0 bits (28), Expect = 1e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccg 172
|||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 48 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccg 91
>gb|T21082.1|T21082 3090 Lambda-PRL2 Arabidopsis thaliana cDNA clone 103A7T7, mRNA
sequence
Length = 345
Score = 56.0 bits (28), Expect = 1e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccg 172
|||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 50 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccg 93
>gb|N97136.1|N97136 22315 Lambda-PRL2 Arabidopsis thaliana cDNA clone 245F9T7, mRNA
sequence
Length = 314
Score = 56.0 bits (28), Expect = 1e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccg 172
|||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 17 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccg 60
>gb|T13864.1|T13864 2029 Lambda-PRL2 Arabidopsis thaliana cDNA clone 42E12T7, mRNA
sequence
Length = 304
Score = 56.0 bits (28), Expect = 1e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccg 172
|||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 15 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccg 58
>gb|BE038821.1|BE038821 AB07C09 AB Arabidopsis thaliana cDNA 5' similar to 60s ribosomal
protein l18, mRNA sequence
Length = 702
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 105 aagaagaccaagcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaag 164
||||||||||| | || || || |||||||| ||||||||||| ||||| |||||||||
Sbjct: 19 aagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaag 78
Query: 165 ctctaccg 172
|| |||||
Sbjct: 79 ctttaccg 86
>gb|AV825327.1|AV825327 AV825327 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-08-E24 5',
mRNA sequence
Length = 612
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 105 aagaagaccaagcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaag 164
||||||||||| | || || || |||||||| ||||||||||| ||||| |||||||||
Sbjct: 47 aagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaag 106
Query: 165 ctctaccg 172
|| |||||
Sbjct: 107 ctttaccg 114
>gb|AV827922.1|AV827922 AV827922 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-22-B03 5',
mRNA sequence
Length = 583
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 105 aagaagaccaagcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaag 164
||||||||||| | || || || |||||||| ||||||||||| ||||| |||||||||
Sbjct: 47 aagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaag 106
Query: 165 ctctaccg 172
|| |||||
Sbjct: 107 ctttaccg 114
>gb|CF652057.1|CF652057 31-L020362-066-002-N08-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001N082Q 5-PRIME, mRNA sequence
Length = 777
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 105 aagaagaccaagcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaag 164
||||||||||| | || || || |||||||| ||||||||||| ||||| |||||||||
Sbjct: 26 aagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaag 85
Query: 165 ctctaccg 172
|| |||||
Sbjct: 86 ctttaccg 93
>gb|CF652156.1|CF652156 37-L020525-066-003-J09-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001J093Q 5-PRIME, mRNA sequence
Length = 799
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 105 aagaagaccaagcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaag 164
||||||||||| | || || || |||||||| ||||||||||| ||||| |||||||||
Sbjct: 28 aagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaag 87
Query: 165 ctctaccg 172
|| |||||
Sbjct: 88 ctttaccg 95
>gb|CF653073.1|CF653073 94-L020167-066-001-L24-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001L241Q 5-PRIME, mRNA sequence
Length = 174
Score = 56.0 bits (28), Expect = 1e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccg 172
|||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 29 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccg 72
>gb|AV552035.1|AV552035 AV552035 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ19d02R 5', mRNA sequence
Length = 374
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 105 aagaagaccaagcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaag 164
||||||||||| | || || || |||||||| ||||||||||| ||||| |||||||||
Sbjct: 8 aagaagaccaaaaggactgctcctaagtccgatgatgtctacctaaagcttctcgtcaag 67
Query: 165 ctctaccg 172
|| |||||
Sbjct: 68 ctttaccg 75
>gb|AV552450.1|AV552450 AV552450 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ30a02R 5', mRNA sequence
Length = 408
Score = 56.0 bits (28), Expect = 1e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccg 172
|||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 23 aagtccgatgatgtctacctaaagcttctcgtcaagctttaccg 66
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 272,032
Number of Sequences: 1013581
Number of extensions: 272032
Number of successful extensions: 19575
Number of sequences better than 0.5: 115
Number of HSP's better than 0.5 without gapping: 75
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 19027
Number of HSP's gapped (non-prelim): 585
length of query: 877
length of database: 908,940,872
effective HSP length: 20
effective length of query: 857
effective length of database: 888,669,252
effective search space: 761589548964
effective search space used: 761589548964
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)