BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192958.2.3
(1681 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY035087.1| Arabidopsis thaliana putative dnaJ protein h... 206 9e-051
gb|AY113878.1| Arabidopsis thaliana putative DnaJ-like prot... 206 9e-051
emb|AX506322.1| Sequence 1017 from Patent WO0216655 206 9e-051
ref|NM_114279.2| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3)... 206 9e-051
gb|U22340.1|ATU22340 Arabidopsis thaliana DnaJ homolog (atj... 198 2e-048
gb|AY045655.1| Arabidopsis thaliana AT3g44110/F26G5_60 mRNA... 198 2e-048
gb|AY088078.1| Arabidopsis thaliana clone 40976 mRNA, compl... 198 2e-048
gb|AV524587.1|AV524587 AV524587 Arabidopsis thaliana aboveg... 194 3e-047
gb|CB259915.1|CB259915 13-E9624-013-004-J03-T7R MPIZ-ADIS-0... 190 5e-046
ref|NM_180322.1| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3)... 149 2e-033
gb|BU636099.1|BU636099 045E06 Infected Arabidopsis Leaf Ara... 143 1e-031
gb|AV785278.1|AV785278 AV785278 RAFL6 Arabidopsis thaliana ... 139 2e-030
gb|U64912.1|ATU64912 Arabidopsis thaliana farnesylated prot... 131 4e-028
gb|AV785374.1|AV785374 AV785374 RAFL6 Arabidopsis thaliana ... 129 2e-027
gb|AV542282.1|AV542282 AV542282 Arabidopsis thaliana roots ... 129 2e-027
gb|T76230.1|T76230 11008 Lambda-PRL2 Arabidopsis thaliana c... 119 2e-024
gb|BE526451.1|BE526451 M65D04STM Arabidopsis developing see... 119 2e-024
gb|AV538224.1|AV538224 AV538224 Arabidopsis thaliana roots ... 119 2e-024
gb|AV531399.1|AV531399 AV531399 Arabidopsis thaliana flower... 117 6e-024
emb|BX831588.1|CNS0A0V0 Arabidopsis thaliana Full-length cD... 113 1e-022
ref|NM_122127.2| Arabidopsis thaliana ATJ2 AT5G22060 (ATJ2)... 113 1e-022
gb|AV782390.1|AV782390 AV782390 RAFL4 Arabidopsis thaliana ... 111 4e-022
gb|AV540757.1|AV540757 AV540757 Arabidopsis thaliana roots ... 111 4e-022
gb|AV542350.1|AV542350 AV542350 Arabidopsis thaliana roots ... 111 4e-022
gb|AV562719.1|AV562719 AV562719 Arabidopsis thaliana green ... 111 4e-022
emb|BX830687.1|CNS0A0QX Arabidopsis thaliana Full-length cD... 111 4e-022
dbj|AK118386.1| Arabidopsis thaliana At5g22060 mRNA for put... 111 4e-022
gb|H76192.1|H76192 17897 Lambda-PRL2 Arabidopsis thaliana c... 103 1e-019
gb|AV518673.2|AV518673 AV518673 Arabidopsis thaliana aboveg... 103 1e-019
gb|L36113.1|ATHATJ Arabidopsis thaliana chaperone protein (... 103 1e-019
gb|AF032883.1|AF032883 Arabidopsis thaliana DnaJ homolog At... 101 4e-019
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 101 4e-019
emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome ... 101 4e-019
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 101 4e-019
gb|BZ769122.1|BZ769122 SALK_141625.50.70.x Arabidopsis thal... 100 2e-018
emb|AJ601167.1| Arabidopsis thaliana T-DNA flanking sequenc... 100 2e-018
gb|H76988.1|H76988 17419 Lambda-PRL2 Arabidopsis thaliana c... 100 2e-018
gb|CD533115.1|CD533115 30C8 Arabidopsis Leaf Senescence Lib... 94 9e-017
gb|BP785067.1|BP785067 BP785067 RAFL7 Arabidopsis thaliana ... 94 9e-017
gb|BP820929.1|BP820929 BP820929 RAFL19 Arabidopsis thaliana... 94 9e-017
dbj|AK220968.1| Arabidopsis thaliana mRNA for dnaJ protein ... 94 9e-017
gb|BZ358530.1|BZ358530 SALK_132923.43.10.x Arabidopsis thal... 88 6e-015
gb|AV544321.1|AV544321 AV544321 Arabidopsis thaliana roots ... 88 6e-015
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 86 2e-014
emb|AL589883.1|ATT6G21 Arabidopsis thaliana DNA chromosome ... 86 2e-014
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 86 2e-014
gb|BP787373.1|BP787373 BP787373 RAFL7 Arabidopsis thaliana ... 84 9e-014
gb|CB258912.1|CB258912 09-E011082-014-003-B03-T7R MPIZ-ADIS... 80 1e-012
gb|AV526975.1|AV526975 AV526975 Arabidopsis thaliana aboveg... 80 1e-012
gb|AV524937.2|AV524937 AV524937 Arabidopsis thaliana aboveg... 80 1e-012
gb|CK119390.1|CK119390 201l01.p1 AtM1 Arabidopsis thaliana ... 80 1e-012
gb|BP561192.1|BP561192 BP561192 RAFL6 Arabidopsis thaliana ... 80 1e-012
gb|BP595678.1|BP595678 BP595678 RAFL15 Arabidopsis thaliana... 80 1e-012
gb|BP561520.2|BP561520 BP561520 RAFL8 Arabidopsis thaliana ... 80 1e-012
gb|BP787235.1|BP787235 BP787235 RAFL7 Arabidopsis thaliana ... 80 1e-012
gb|BP812305.1|BP812305 BP812305 RAFL19 Arabidopsis thaliana... 80 1e-012
gb|BP819333.1|BP819333 BP819333 RAFL19 Arabidopsis thaliana... 80 1e-012
gb|BP820936.1|BP820936 BP820936 RAFL19 Arabidopsis thaliana... 80 1e-012
gb|BP821075.1|BP821075 BP821075 RAFL19 Arabidopsis thaliana... 80 1e-012
gb|BP825757.1|BP825757 BP825757 RAFL19 Arabidopsis thaliana... 80 1e-012
gb|BP831553.1|BP831553 BP831553 RAFL19 Arabidopsis thaliana... 80 1e-012
gb|BP851282.1|BP851282 BP851282 RAFL21 Arabidopsis thaliana... 80 1e-012
gb|BP865904.1|BP865904 BP865904 RAFL21 Arabidopsis thaliana... 80 1e-012
gb|BP867654.1|BP867654 BP867654 RAFL21 Arabidopsis thaliana... 80 1e-012
emb|CR381175.1| Arabidopsis thaliana transposon insertion S... 80 1e-012
gb|AV794173.1|AV794173 AV794173 RAFL8 Arabidopsis thaliana ... 78 6e-012
gb|BP783214.1|BP783214 BP783214 RAFL7 Arabidopsis thaliana ... 78 6e-012
gb|BP835283.1|BP835283 BP835283 RAFL19 Arabidopsis thaliana... 78 6e-012
gb|BP837230.1|BP837230 BP837230 RAFL19 Arabidopsis thaliana... 78 6e-012
gb|AV805037.1|AV805037 AV805037 RAFL9 Arabidopsis thaliana ... 76 2e-011
gb|AV546641.1|AV546641 AV546641 Arabidopsis thaliana roots ... 76 2e-011
gb|BP668598.1|BP668598 BP668598 RAFL21 Arabidopsis thaliana... 74 9e-011
gb|BP817250.1|BP817250 BP817250 RAFL19 Arabidopsis thaliana... 74 9e-011
gb|AV785973.1|AV785973 AV785973 RAFL6 Arabidopsis thaliana ... 72 3e-010
gb|BP664920.1|BP664920 BP664920 RAFL21 Arabidopsis thaliana... 72 3e-010
gb|BP671953.1|BP671953 BP671953 RAFL21 Arabidopsis thaliana... 70 1e-009
gb|BP851122.1|BP851122 BP851122 RAFL21 Arabidopsis thaliana... 70 1e-009
gb|BP781067.1|BP781067 BP781067 RAFL7 Arabidopsis thaliana ... 66 2e-008
gb|B22771.1|B22771 F22A1TR IGF Arabidopsis thaliana genomic... 64 8e-008
gb|BP665864.1|BP665864 BP665864 RAFL21 Arabidopsis thaliana... 64 8e-008
gb|BP846461.1|BP846461 BP846461 RAFL21 Arabidopsis thaliana... 64 8e-008
gb|CL477480.1|CL477480 SAIL_274_A01.v1 SAIL Collection Arab... 62 3e-007
gb|AV824391.1|AV824391 AV824391 RAFL6 Arabidopsis thaliana ... 62 3e-007
gb|AU239248.1|AU239248 AU239248 RAFL19 Arabidopsis thaliana... 62 3e-007
gb|AV550422.1|AV550422 AV550422 Arabidopsis thaliana roots ... 62 3e-007
gb|BP820203.1|BP820203 BP820203 RAFL19 Arabidopsis thaliana... 62 3e-007
gb|BP820336.1|BP820336 BP820336 RAFL19 Arabidopsis thaliana... 62 3e-007
gb|BP847929.1|BP847929 BP847929 RAFL21 Arabidopsis thaliana... 62 3e-007
gb|BP853093.1|BP853093 BP853093 RAFL21 Arabidopsis thaliana... 62 3e-007
gb|BP855038.1|BP855038 BP855038 RAFL21 Arabidopsis thaliana... 62 3e-007
gb|BP855559.1|BP855559 BP855559 RAFL21 Arabidopsis thaliana... 62 3e-007
gb|BP859641.1|BP859641 BP859641 RAFL21 Arabidopsis thaliana... 62 3e-007
gb|BP865537.1|BP865537 BP865537 RAFL21 Arabidopsis thaliana... 62 3e-007
gb|F20032.1|F20032 ATTS6071 AC16H Arabidopsis thaliana cDNA... 62 3e-007
gb|BP813111.1|BP813111 BP813111 RAFL19 Arabidopsis thaliana... 60 1e-006
gb|AI992876.1|AI992876 701493846 A. thaliana, Ohio State cl... 58 5e-006
gb|BE523152.1|BE523152 M33A2STM Arabidopsis developing seed... 58 5e-006
gb|BP851351.1|BP851351 BP851351 RAFL21 Arabidopsis thaliana... 58 5e-006
gb|F15464.1|F15464 ATTS5712 Ors-B Arabidopsis thaliana cDNA... 56 2e-005
gb|C99756.1|C99756 C99756 YAC clone CIC7E11 region-specific... 56 2e-005
gb|AV821835.1|AV821835 AV821835 RAFL4 Arabidopsis thaliana ... 56 2e-005
gb|BP566081.1|BP566081 BP566081 RAFL14 Arabidopsis thaliana... 56 2e-005
gb|T43662.1|T43662 6925 Lambda-PRL2 Arabidopsis thaliana cD... 54 8e-005
gb|AI999092.1|AI999092 701554435 A. thaliana, Columbia Col-... 54 8e-005
gb|BP832844.1|BP832844 BP832844 RAFL19 Arabidopsis thaliana... 54 8e-005
gb|BP612298.1|BP612298 BP612298 RAFL16 Arabidopsis thaliana... 50 0.001
gb|AV795946.1|AV795946 AV795946 RAFL8 Arabidopsis thaliana ... 48 0.005
gb|AV804585.1|AV804585 AV804585 RAFL9 Arabidopsis thaliana ... 48 0.005
gb|BP816535.1|BP816535 BP816535 RAFL19 Arabidopsis thaliana... 48 0.005
gb|BP861198.1|BP861198 BP861198 RAFL21 Arabidopsis thaliana... 48 0.005
emb|CR399170.1| Arabidopsis thaliana T-DNA flanking sequenc... 46 0.020
gb|CA781754.1|CA781754 048C12AF Infected Arabidopsis Leaf A... 46 0.020
gb|CA963966.1|CA963966 cATI008A10AF Infected Arabidopsis Le... 46 0.020
gb|BP806707.1|BP806707 BP806707 RAFL16 Arabidopsis thaliana... 46 0.020
gb|B22558.1|B22558 F20H6TF IGF Arabidopsis thaliana genomic... 44 0.078
gb|AV794879.1|AV794879 AV794879 RAFL8 Arabidopsis thaliana ... 44 0.078
gb|BP571980.1|BP571980 BP571980 RAFL14 Arabidopsis thaliana... 44 0.078
gb|BP589773.1|BP589773 BP589773 RAFL15 Arabidopsis thaliana... 44 0.078
gb|BP620954.1|BP620954 BP620954 RAFL16 Arabidopsis thaliana... 44 0.078
gb|BP625703.1|BP625703 BP625703 RAFL17 Arabidopsis thaliana... 44 0.078
gb|BP636802.1|BP636802 BP636802 RAFL19 Arabidopsis thaliana... 44 0.078
gb|BP585247.1|BP585247 BP585247 RAFL15 Arabidopsis thaliana... 42 0.31
gb|BP646511.1|BP646511 BP646511 RAFL19 Arabidopsis thaliana... 42 0.31
gb|BP856956.1|BP856956 BP856956 RAFL21 Arabidopsis thaliana... 42 0.31
>gb|AY035087.1| Arabidopsis thaliana putative dnaJ protein homolog atj3 (At3g44110)
mRNA, complete cds
Length = 1653
Score = 206 bits (104), Expect = 9e-051
Identities = 320/392 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 1159 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1100
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 1099 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1040
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 1039 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 980
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 979 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 920
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 919 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 860
Query: 886 gtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatgcct 945
||||||||||||||||| |||| || |||||||||||||| | | ||||| ||
Sbjct: 859 gtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattccc 800
Query: 946 ttctccacaaacacttcaagaaccttcttctc 977
||||||||| ||||||||| |||||||||||
Sbjct: 799 ttctccacattcacttcaagcaccttcttctc 768
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 367 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 308
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 307 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 248
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 247 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 188
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 187 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 136
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 683 atgctgcatctgctggatcattccagg 657
>gb|AY113878.1| Arabidopsis thaliana putative DnaJ-like protein atj3 (At3g44110)
mRNA, complete cds
Length = 1294
Score = 206 bits (104), Expect = 9e-051
Identities = 320/392 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 1043 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 984
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 983 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 924
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 923 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 864
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 863 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 804
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 803 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 744
Query: 886 gtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatgcct 945
||||||||||||||||| |||| || |||||||||||||| | | ||||| ||
Sbjct: 743 gtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattccc 684
Query: 946 ttctccacaaacacttcaagaaccttcttctc 977
||||||||| ||||||||| |||||||||||
Sbjct: 683 ttctccacattcacttcaagcaccttcttctc 652
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 251 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 192
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 191 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 132
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 131 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 72
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 71 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 20
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 567 atgctgcatctgctggatcattccagg 541
>emb|AX506322.1| Sequence 1017 from Patent WO0216655
Length = 1263
Score = 206 bits (104), Expect = 9e-051
Identities = 320/392 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 1043 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 984
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 983 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 924
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 923 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 864
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 863 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 804
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 803 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 744
Query: 886 gtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatgcct 945
||||||||||||||||| |||| || |||||||||||||| | | ||||| ||
Sbjct: 743 gtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattccc 684
Query: 946 ttctccacaaacacttcaagaaccttcttctc 977
||||||||| ||||||||| |||||||||||
Sbjct: 683 ttctccacattcacttcaagcaccttcttctc 652
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 251 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 192
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 191 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 132
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 131 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 72
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 71 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 20
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 567 atgctgcatctgctggatcattccagg 541
>ref|NM_114279.2| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3) transcript variant
AT3G44110.1 mRNA, complete cds
Length = 1746
Score = 206 bits (104), Expect = 9e-051
Identities = 320/392 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 1205 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1146
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 1145 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1086
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 1085 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 1026
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 1025 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 966
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 965 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 906
Query: 886 gtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatgcct 945
||||||||||||||||| |||| || |||||||||||||| | | ||||| ||
Sbjct: 905 gtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattccc 846
Query: 946 ttctccacaaacacttcaagaaccttcttctc 977
||||||||| ||||||||| |||||||||||
Sbjct: 845 ttctccacattcacttcaagcaccttcttctc 814
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 413 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 354
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 353 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 294
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 293 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 234
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 233 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 182
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 729 atgctgcatctgctggatcattccagg 703
>gb|U22340.1|ATU22340 Arabidopsis thaliana DnaJ homolog (atj) mRNA, complete cds
Length = 1642
Score = 198 bits (100), Expect = 2e-048
Identities = 319/392 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 1142 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1083
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 1082 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1023
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 1022 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 963
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 962 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 903
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
||||||||||||| || ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 902 tttctcttgaactgtgggtgctctttctgctgaaggacaaacactatatctccagtgaca 843
Query: 886 gtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatgcct 945
||||||||||||||||| |||| || |||||||||||||| | | ||||| ||
Sbjct: 842 gtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattccc 783
Query: 946 ttctccacaaacacttcaagaaccttcttctc 977
||||||||| ||||||||| |||||||||||
Sbjct: 782 ttctccacattcacttcaagcaccttcttctc 751
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 350 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 291
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 290 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 231
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 230 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 171
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 170 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 119
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 666 atgctgcatctgctggatcattccagg 640
>gb|AY045655.1| Arabidopsis thaliana AT3g44110/F26G5_60 mRNA, complete cds
Length = 1692
Score = 198 bits (100), Expect = 2e-048
Identities = 319/392 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 1176 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1117
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 1116 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1057
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 1056 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 997
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 996 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 937
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 936 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 877
Query: 886 gtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatgcct 945
||||||||||||||||| |||| || |||||||||||||| | | ||||| ||
Sbjct: 876 gtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattccc 817
Query: 946 ttctccacaaacacttcaagaaccttcttctc 977
|||| |||| ||||||||| |||||||||||
Sbjct: 816 ttcttcacattcacttcaagcaccttcttctc 785
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 384 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 325
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 324 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 265
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 264 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 205
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 204 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 153
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 700 atgctgcatctgctggatcattccagg 674
>gb|AY088078.1| Arabidopsis thaliana clone 40976 mRNA, complete sequence
Length = 1595
Score = 198 bits (100), Expect = 2e-048
Identities = 319/392 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| || ||||||||
Sbjct: 1185 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacctttcatgaat 1126
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 1125 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1066
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 1065 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 1006
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 1005 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 946
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 945 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 886
Query: 886 gtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatgcct 945
||||||||||||||||| |||| || |||||||||||||| | | ||||| ||
Sbjct: 885 gtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattccc 826
Query: 946 ttctccacaaacacttcaagaaccttcttctc 977
||||||||| ||||||||| |||||||||||
Sbjct: 825 ttctccacattcacttcaagcaccttcttctc 794
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 393 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 334
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 333 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 274
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 273 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 214
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 213 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 162
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 709 atgctgcatctgctggatcattccagg 683
>gb|AV524587.1|AV524587 AV524587 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD06d09R 5', mRNA
sequence
Length = 554
Score = 194 bits (98), Expect = 3e-047
Identities = 266/322 (82%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 374 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 315
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 314 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 255
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 254 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 195
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 194 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 135
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||||||
Sbjct: 134 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 75
Query: 886 gtgtcaggcgcttcatcagctt 907
||||||||||||||||| ||||
Sbjct: 74 gtgtcaggcgcttcatctgctt 53
>gb|CB259915.1|CB259915 13-E9624-013-004-J03-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770J034Q 5-PRIME, mRNA sequence
Length = 574
Score = 190 bits (96), Expect = 5e-046
Identities = 318/392 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 496 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 437
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 436 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 377
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 376 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 317
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 316 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 257
Query: 826 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtgaca 885
|||||||||||||| || ||||| |||||||| || ||||| | ||||||||||| |||
Sbjct: 256 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtaaca 197
Query: 886 gtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatgcct 945
||||||||||||||||| |||| || |||||||||||||| | ||||| ||
Sbjct: 196 gtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgaaaaagttgcattccc 137
Query: 946 ttctccacaaacacttcaagaaccttcttctc 977
||||||||| ||||||||| |||||||||||
Sbjct: 136 ttctccacattcacttcaagcaccttcttctc 105
>ref|NM_180322.1| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3) transcript variant
AT3G44110.2 mRNA, complete cds
Length = 1579
Score = 149 bits (75), Expect = 2e-033
Identities = 276/343 (80%)
Strand = Plus / Minus
Query: 635 ccttcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaat 694
|||||||||| ||||||||||| || ||||| ||||| ||| | || |||||| | ||||
Sbjct: 1156 ccttcatgaatggcctctggtatatcggcattccttcatcgcttattgccttgtatgaat 1097
Query: 695 caggcttcacaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgag 754
|||| ||||| || || || ||||| ||||| || || || ||| |||||||||||
Sbjct: 1096 caggtttcacgacctccccaggattagatttaatgagaagacttctgccatccaagtgag 1037
Query: 755 tcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaaga 814
||| |||||| ||||||||||||| || ||| || | | || |||||||| ||||
Sbjct: 1036 tcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaaga 977
Query: 815 ggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatat 874
|||| || ||||||||||||||||| || ||||| |||||||| || ||||| | ||||
Sbjct: 976 ggtcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatat 917
Query: 875 ctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccat 934
|||||||||||||||||||||||||||| |||| || |||||||||||||| | |
Sbjct: 916 ctccagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgt 857
Query: 935 tctgcatgcctttctccacaaacacttcaagaaccttcttctc 977
||||| || ||||||||| ||||||||| |||||||||||
Sbjct: 856 gttgcattcccttctccacattcacttcaagcaccttcttctc 814
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 413 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 354
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 353 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 294
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 293 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 234
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 233 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 182
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 729 atgctgcatctgctggatcattccagg 703
>gb|BU636099.1|BU636099 045E06 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 735
Score = 143 bits (72), Expect = 1e-031
Identities = 273/340 (80%)
Strand = Plus / Minus
Query: 638 tcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcag 697
||||||| ||||||||||| || ||||| ||||| ||| | || |||||| | |||||||
Sbjct: 656 tcatgaatggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcag 597
Query: 698 gcttcacaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtca 757
| ||||| || || || ||||| ||||| || || || ||| ||||||||||||||
Sbjct: 596 gtttcacgacctccccaggattagatttaatgagaagacttctgccatccaagtgagtca 537
Query: 758 caacaaactggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggt 817
|||||| ||||||||||||| || ||| || | | || |||||||| |||||||
Sbjct: 536 gaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggt 477
Query: 818 catcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctc 877
| || ||||||||||||||||| || ||||| |||||||| || ||||| | |||||||
Sbjct: 476 cttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctc 417
Query: 878 cagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattct 937
||||||||||||||||||||||||| |||| || |||||||||||||| | | |
Sbjct: 416 cagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgtt 357
Query: 938 gcatgcctttctccacaaacacttcaagaaccttcttctc 977
|||| || ||||||||| ||||||||| |||||||||||
Sbjct: 356 gcattcccttctccacattcacttcaagcaccttcttctc 317
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 232 atgctgcatctgctggatcattccagg 206
>gb|AV785278.1|AV785278 AV785278 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-13-M23 3',
mRNA sequence
Length = 697
Score = 139 bits (70), Expect = 2e-030
Identities = 220/270 (81%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 428 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 487
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 488 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 547
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 548 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 607
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 608 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 667
Query: 826 tttctcttgaacttgggatgctccttctgc 855
|||||||||||||| || ||||| ||||||
Sbjct: 668 tttctcttgaactttgggtgctctttctgc 697
>gb|U64912.1|ATU64912 Arabidopsis thaliana farnesylated protein ATFP9 mRNA, partial cds
Length = 270
Score = 131 bits (66), Expect = 4e-028
Identities = 207/254 (81%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 260 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 201
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 200 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 141
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 140 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 81
Query: 766 tggaagccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccc 825
||||||||||||| || ||| || | | || |||||||| |||||||| || |||
Sbjct: 80 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 21
Query: 826 tttctcttgaactt 839
||||||||||||||
Sbjct: 20 tttctcttgaactt 7
>gb|AV785374.1|AV785374 AV785374 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-15-L15 3',
mRNA sequence
Length = 695
Score = 129 bits (65), Expect = 2e-027
Identities = 161/193 (83%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 484 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 543
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 544 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 603
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 604 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 663
Query: 766 tggaagccacaca 778
|||||||||||||
Sbjct: 664 tggaagccacaca 676
>gb|AV542282.1|AV542282 AV542282 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ181e08F 3', mRNA sequence
Length = 628
Score = 129 bits (65), Expect = 2e-027
Identities = 161/193 (83%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 410 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 469
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 470 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 529
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 530 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 589
Query: 766 tggaagccacaca 778
|||||||||||||
Sbjct: 590 tggaagccacaca 602
>gb|T76230.1|T76230 11008 Lambda-PRL2 Arabidopsis thaliana cDNA clone 147N11T7, mRNA
sequence
Length = 418
Score = 119 bits (60), Expect = 2e-024
Identities = 140/167 (83%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
|||||||| || ||||||||||||||||| || ||||| |||||||| || ||||| |
Sbjct: 267 aagaggtcttcnccctttctcttgaactttgggtgctctttctgctgaaggacaaacact 208
Query: 871 atatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgc 930
|||||||||||||||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 207 atatctccagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctga 148
Query: 931 ccattctgcatgcctttctccacaaacacttcaagaaccttcttctc 977
| | ||||| || ||||||||| ||||||||| |||||||||||
Sbjct: 147 ctgtgttgcattcccttctccacattcacttcaagcaccttcttctc 101
>gb|BE526451.1|BE526451 M65D04STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600035110R1 5', mRNA sequence
Length = 261
Score = 119 bits (60), Expect = 2e-024
Identities = 138/164 (84%)
Strand = Plus / Minus
Query: 744 atccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtg 803
|||||||||||||| |||||| ||||||||||||| || ||| || | | || |||||
Sbjct: 226 atccaagtgagtcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtg 167
Query: 804 ctcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaac 863
||| |||||||| || ||||||||||||||||| || ||||| |||||||| || ||
Sbjct: 166 ctccacaaagaggtcttctccctttctcttgaactttgggtgctctttctgctgaaggac 107
Query: 864 aaagatgatatctccagtgacagtgtcaggcgcttcatcagctt 907
||| | |||||||||||||||||||||||||||||||| ||||
Sbjct: 106 aaacactatatctccagtgacagtgtcaggcgcttcatctgctt 63
>gb|AV538224.1|AV538224 AV538224 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ112c07F 3', mRNA sequence
Length = 612
Score = 119 bits (60), Expect = 2e-024
Identities = 162/196 (82%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 386 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 445
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
|||||||| ||||| || ||||| || || || | ||||||||||| |||||||| ||
Sbjct: 446 aacggcctttggtatattggcattccctcatcacttatcgccttgaatgaatcaggtttg 505
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 506 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 565
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 566 aactggaagccacaca 581
>gb|AV531399.1|AV531399 AV531399 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB021b03F 3', mRNA sequence
Length = 573
Score = 117 bits (59), Expect = 6e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 387 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 446
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 447 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 506
Query: 706 acttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaac 765
|| || || ||||| ||||| || || || ||| |||||||||||||| ||||||
Sbjct: 507 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 566
Query: 766 tggaagc 772
|||||||
Sbjct: 567 tggaagc 573
>emb|BX831588.1|CNS0A0V0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH17ZB05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1489
Score = 113 bits (57), Expect = 1e-022
Identities = 297/377 (78%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
||||| || ||||||||||| |||||||| || |||||||||||||| | ||||| |
Sbjct: 914 aagagatcctcaccctttcttttgaactttgggtgctccttctgctgaatgacaaacact 855
Query: 871 atatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgc 930
|||||||| |||||||| |||||||||||||| |||| ||| |||||||||||||||
Sbjct: 854 atatctccggtgacagtatcaggcgcttcatcggcttgtccactgaatgtgatcttctga 795
Query: 931 ccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcacaacttta 990
| ||||| || ||||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 794 ttgtgttgcattcccttctccacatttacttcaagcaccttcttctcagagacaaccttc 735
Query: 991 tcacccttgcactgtgggcatctatccttgtcgctgattgtctctccagaacccttgcac 1050
|| || ||||| ||||| || || ||| || |||| |||||||| | || |||||
Sbjct: 734 tctcctttgcattgtggacacctgtcccgatcattgatggtctctcctgtgcctttgcaa 675
Query: 1051 tcgttgcaaggatgctgcatttgctggatcattccaggccccaactgcctgatttggacc 1110
|| || |||| |||||||| ||||| ||||||||||| || ||||||||||| || |
Sbjct: 674 tcattacaagcatgctgcacctgctgcatcattccaggtccaaactgcctgatcgagatc 615
Query: 1111 ttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaaccctta 1170
|| | || |||||||| || ||| |||| || ||||||||||||||||||||||||
Sbjct: 614 ttcattcccgaaccttgacagccaccacatttcattgaagctccagactttgaacccttg 555
Query: 1171 ccattgcacttggagca 1187
|| || ||||| |||||
Sbjct: 554 ccgttacactttgagca 538
Score = 111 bits (56), Expect = 4e-022
Identities = 161/196 (82%)
Strand = Plus / Minus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 1142 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1083
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
|||||||| ||||| || ||||| || || || | ||||||||| | |||||||| ||
Sbjct: 1082 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 1023
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 1022 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 963
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 962 aactggaagccacaca 947
Score = 61.9 bits (31), Expect = 3e-007
Identities = 115/143 (80%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| ||||| || |||||||| ||||||||||| | ||| |||||
Sbjct: 344 cccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttctcagga 285
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || | || |||||| |||| |||| ||| || ||||| ||||| || || |||||
Sbjct: 284 tcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcaccaccctta 225
Query: 1501 tcggggtggttcttgatggcggc 1523
|| || ||||| ||||| |||||
Sbjct: 224 tcaggatggtttttgatagcggc 202
>ref|NM_122127.2| Arabidopsis thaliana ATJ2 AT5G22060 (ATJ2) mRNA, complete cds
Length = 1565
Score = 113 bits (57), Expect = 1e-022
Identities = 297/377 (78%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
||||| || ||||||||||| |||||||| || |||||||||||||| | ||||| |
Sbjct: 950 aagagatcctcaccctttcttttgaactttgggtgctccttctgctgaatgacaaacact 891
Query: 871 atatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgc 930
|||||||| |||||||| |||||||||||||| |||| ||| |||||||||||||||
Sbjct: 890 atatctccggtgacagtatcaggcgcttcatcggcttgtccactgaatgtgatcttctga 831
Query: 931 ccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcacaacttta 990
| ||||| || ||||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 830 ttgtgttgcattcccttctccacatttacttcaagcaccttcttctcagagacaaccttc 771
Query: 991 tcacccttgcactgtgggcatctatccttgtcgctgattgtctctccagaacccttgcac 1050
|| || ||||| ||||| || || ||| || |||| |||||||| | || |||||
Sbjct: 770 tctcctttgcattgtggacacctgtcccgatcattgatggtctctcctgtgcctttgcaa 711
Query: 1051 tcgttgcaaggatgctgcatttgctggatcattccaggccccaactgcctgatttggacc 1110
|| || |||| |||||||| ||||| ||||||||||| || ||||||||||| || |
Sbjct: 710 tcattacaagcatgctgcacctgctgcatcattccaggtccaaactgcctgatcgagatc 651
Query: 1111 ttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaaccctta 1170
|| | || |||||||| || ||| |||| || ||||||||||||||||||||||||
Sbjct: 650 ttcattcccgaaccttgacagccaccacatttcattgaagctccagactttgaacccttg 591
Query: 1171 ccattgcacttggagca 1187
|| || ||||| |||||
Sbjct: 590 ccgttacactttgagca 574
Score = 111 bits (56), Expect = 4e-022
Identities = 161/196 (82%)
Strand = Plus / Minus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 1178 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1119
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
|||||||| ||||| || ||||| || || || | ||||||||| | |||||||| ||
Sbjct: 1118 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 1059
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 1058 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 999
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 998 aactggaagccacaca 983
Score = 61.9 bits (31), Expect = 3e-007
Identities = 115/143 (80%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| ||||| || |||||||| ||||||||||| | ||| |||||
Sbjct: 380 cccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttctcagga 321
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || | || |||||| |||| |||| ||| || ||||| ||||| || || |||||
Sbjct: 320 tcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcaccaccctta 261
Query: 1501 tcggggtggttcttgatggcggc 1523
|| || ||||| ||||| |||||
Sbjct: 260 tcaggatggtttttgatagcggc 238
>gb|AV782390.1|AV782390 AV782390 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-B06 3',
mRNA sequence
Length = 589
Score = 111 bits (56), Expect = 4e-022
Identities = 161/196 (82%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 385 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 444
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
|||||||| ||||| || ||||| || || || | ||||||||| | |||||||| ||
Sbjct: 445 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 504
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 505 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 564
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 565 aactggaagccacaca 580
>gb|AV540757.1|AV540757 AV540757 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ154f02F 3', mRNA sequence
Length = 607
Score = 111 bits (56), Expect = 4e-022
Identities = 161/196 (82%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 349 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 408
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
|||||||| ||||| || ||||| || || || | ||||||||| | |||||||| ||
Sbjct: 409 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 468
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 469 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 528
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 529 aactggaagccacaca 544
>gb|AV542350.1|AV542350 AV542350 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ182f12F 3', mRNA sequence
Length = 596
Score = 111 bits (56), Expect = 4e-022
Identities = 161/196 (82%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 386 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 445
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
|||||||| ||||| || ||||| || || || | ||||||||| | |||||||| ||
Sbjct: 446 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 505
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 506 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 565
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 566 aactggaagccacaca 581
>gb|AV562719.1|AV562719 AV562719 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ174h06F 3', mRNA sequence
Length = 581
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 410 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 469
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| ||||| ||| | || |||||| | |||||||| |||||
Sbjct: 470 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 529
Query: 706 acttcgcccggatttgattt 725
|| || || ||||| |||||
Sbjct: 530 acctccccaggattagattt 549
>emb|BX830687.1|CNS0A0QX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS14ZE01 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1491
Score = 111 bits (56), Expect = 4e-022
Identities = 161/196 (82%)
Strand = Plus / Minus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 1138 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1079
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
|||||||| ||||| || ||||| || || || | ||||||||| | |||||||| ||
Sbjct: 1078 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 1019
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 1018 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 959
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 958 aactggaagccacaca 943
Score = 99.6 bits (50), Expect = 2e-018
Identities = 297/378 (78%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
||||| || ||||||||||| |||||||| || |||||||||||||| | ||||| |
Sbjct: 910 aagagatcctcaccctttcttttgaactttgggtgctccttctgctgaatgacaaacact 851
Query: 871 atatctccagtgacagtgtcaggcgcttcatcagcttcacca-gggaatgtgatcttctg 929
|||||||| |||||||| |||||||||||||| |||| ||| | ||||||||||||||
Sbjct: 850 atatctccggtgacagtatcaggcgcttcatcggcttgtccactgtaatgtgatcttctg 791
Query: 930 cccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcacaacttt 989
| ||||| || ||||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 790 attgtgttgcattcccttctccacatttacttcaagcaccttcttctcagagacaacctt 731
Query: 990 atcacccttgcactgtgggcatctatccttgtcgctgattgtctctccagaacccttgca 1049
|| || ||||| ||||| || || ||| || |||| |||||||| | || |||||
Sbjct: 730 ctctcctttgcattgtggacacctgtcccgatcattgatggtctctcctgtgcctttgca 671
Query: 1050 ctcgttgcaaggatgctgcatttgctggatcattccaggccccaactgcctgatttggac 1109
|| || |||| |||||||| ||||| ||||||||||| || ||||||||||| ||
Sbjct: 670 atcattacaagcatgctgcacctgctgcatcattccaggtccaaactgcctgatcgagat 611
Query: 1110 cttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaaccctt 1169
||| | || |||||||| || ||| |||| || ||||||||||||||||||||||||
Sbjct: 610 cttcattcccgaaccttgacagccaccacatttcattgaagctccagactttgaaccctt 551
Query: 1170 accattgcacttggagca 1187
|| || ||||| |||||
Sbjct: 550 gccgttacactttgagca 533
Score = 54.0 bits (27), Expect = 8e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctc 1427
|||||||| |||||||| ||||| || |||||||| |||||||||||
Sbjct: 339 cccattccttccttgagtgcatcttccccatattgatcatagatctc 293
>dbj|AK118386.1| Arabidopsis thaliana At5g22060 mRNA for putative DNAJ PROTEIN HOMOLOG
ATJ, complete cds, clone: RAFL19-64-P10
Length = 1451
Score = 111 bits (56), Expect = 4e-022
Identities = 161/196 (82%)
Strand = Plus / Minus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 1124 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1065
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
|||||||| ||||| || ||||| || || || | ||||||||| | |||||||| ||
Sbjct: 1064 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 1005
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 1004 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 945
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 944 aactggaagccacaca 929
Score = 105 bits (53), Expect = 2e-020
Identities = 296/377 (78%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
||||| || ||||||||||| |||||||| || |||||||||||||| | ||||| |
Sbjct: 896 aagagatcctcaccctttcttttgaactttgggtgctccttctgctgaatgacaaacact 837
Query: 871 atatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgc 930
|||||||| |||||||| |||||||||||||| |||| ||| |||||||||||||||
Sbjct: 836 atatctccggtgacagtatcaggcgcttcatcggcttgtccactgaatgtgatcttctga 777
Query: 931 ccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcacaacttta 990
| ||||| || ||||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 776 ttgtgttgcattcccttctccacatttacttcaagcaccttcttctcagagacaaccttc 717
Query: 991 tcacccttgcactgtgggcatctatccttgtcgctgattgtctctccagaacccttgcac 1050
|| || ||||| ||||| || || ||| || |||| |||||||| | || |||||
Sbjct: 716 tctcctttgcattgtggacacctgtcccgatcattgatggtctctcctgtgcctttgcaa 657
Query: 1051 tcgttgcaaggatgctgcatttgctggatcattccaggccccaactgcctgatttggacc 1110
|| || |||| |||||||| ||||| ||||| ||||| || ||||||||||| || |
Sbjct: 656 tcattacaagcatgctgcacctgctgcatcatcccaggtccaaactgcctgatcgagatc 597
Query: 1111 ttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaaccctta 1170
|| | || |||||||| || ||| |||| || ||||||||||||||||||||||||
Sbjct: 596 ttcattcccgaaccttgacagccaccacatttcattgaagctccagactttgaacccttg 537
Query: 1171 ccattgcacttggagca 1187
|| || ||||| |||||
Sbjct: 536 ccgttacactttgagca 520
Score = 61.9 bits (31), Expect = 3e-007
Identities = 115/143 (80%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| ||||| || |||||||| ||||||||||| | ||| |||||
Sbjct: 326 cccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttctcagga 267
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || | || |||||| |||| |||| ||| || ||||| ||||| || || |||||
Sbjct: 266 tcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcaccaccctta 207
Query: 1501 tcggggtggttcttgatggcggc 1523
|| || ||||| ||||| |||||
Sbjct: 206 tcaggatggtttttgatagcggc 184
>gb|H76192.1|H76192 17897 Lambda-PRL2 Arabidopsis thaliana cDNA clone 196N24T7, mRNA
sequence
Length = 509
Score = 103 bits (52), Expect = 1e-019
Identities = 138/167 (82%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
|||||| | || ||||| ||||||||||| || ||||| |||||||| || ||||| |
Sbjct: 278 aagaggncttctcccttcctcttgaactttgggtgctctttctgctgaaggacaaacact 219
Query: 871 atatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgc 930
|||||||||||||||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 218 atatctccagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctga 159
Query: 931 ccattctgcatgcctttctccacaaacacttcaagaaccttcttctc 977
| | ||||| || ||||||||| ||||||||| |||||||||||
Sbjct: 158 ctgtgttgcattcccttctccacattcacttcaagcaccttcttctc 112
>gb|AV518673.2|AV518673 AV518673 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD35e10F 3', mRNA
sequence
Length = 570
Score = 103 bits (52), Expect = 1e-019
Identities = 118/140 (84%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 410 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 469
Query: 646 ggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttcaca 705
||||||||||| || ||||| |||| ||| | || |||||| | |||||||| |||||
Sbjct: 470 ggcctctggtatatcggcattcctttatcgcttattgccttgtatgaatcaggtttcacg 529
Query: 706 acttcgcccggatttgattt 725
|| || || ||||| |||||
Sbjct: 530 acctccccaggattagattt 549
>gb|L36113.1|ATHATJ Arabidopsis thaliana chaperone protein (atj) mRNA, complete cds
Length = 1443
Score = 103 bits (52), Expect = 1e-019
Identities = 160/196 (81%)
Strand = Plus / Minus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 1112 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1053
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcaggcttc 702
||||| || ||||| || ||||| || || || | ||||||||| | |||||||| ||
Sbjct: 1052 aacggactttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 993
Query: 703 acaacttcgcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaaca 762
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 992 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 933
Query: 763 aactggaagccacaca 778
||||||||||||||||
Sbjct: 932 aactggaagccacaca 917
Score = 97.6 bits (49), Expect = 6e-018
Identities = 295/377 (78%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
||||| || ||||||||||| |||||||| || |||||||||||||| | ||||| |
Sbjct: 884 aagagatcctcaccctttcttttgaactttgggtgctccttctgctgaatgacaaacact 825
Query: 871 atatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgc 930
|||||||| |||||||| |||||||||||||| |||| ||| |||||||||||||||
Sbjct: 824 atatctccggtgacagtatcaggcgcttcatcggcttgtccactgaatgtgatcttctga 765
Query: 931 ccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcacaacttta 990
| ||||| || ||||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 764 ttgtgttgcattcccttctccacatttacttcaagcaccttcttctcagagacaaccttc 705
Query: 991 tcacccttgcactgtgggcatctatccttgtcgctgattgtctctccagaacccttgcac 1050
|| || ||||| ||||| || || ||| || |||| |||||||| | || ||| |
Sbjct: 704 tctcctttgcattgtggacacctgtcccgatcattgatggtctctcctgtgcctttggaa 645
Query: 1051 tcgttgcaaggatgctgcatttgctggatcattccaggccccaactgcctgatttggacc 1110
|| || |||| |||||||| ||||| ||||||||||| || ||||||||||| || |
Sbjct: 644 tcattacaagcatgctgcacctgctgcatcattccaggtccaaactgcctgatcgagatc 585
Query: 1111 ttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaaccctta 1170
|| | || || ||||| || ||| |||| || ||||||||||||||||||||||||
Sbjct: 584 ttcattcccgagccttgacagccaccacatttcagtgaagctccagactttgaacccttg 525
Query: 1171 ccattgcacttggagca 1187
|| || ||||| |||||
Sbjct: 524 ccgttacactttgagca 508
Score = 61.9 bits (31), Expect = 3e-007
Identities = 115/143 (80%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| ||||| || |||||||| ||||||||||| | ||| |||||
Sbjct: 314 cccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttctcagga 255
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || | || |||||| |||| |||| ||| || ||||| ||||| || || |||||
Sbjct: 254 tcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcaccaccctta 195
Query: 1501 tcggggtggttcttgatggcggc 1523
|| || ||||| ||||| |||||
Sbjct: 194 tcaggatggtttttgatagcggc 172
>gb|AF032883.1|AF032883 Arabidopsis thaliana DnaJ homolog AtJ3 (ATJ3) gene, complete cds
Length = 2403
Score = 101 bits (51), Expect = 4e-019
Identities = 126/151 (83%)
Strand = Plus / Minus
Query: 744 atccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtg 803
|||||||||||||| |||||| ||||||||||||| || ||| || | | || |||||
Sbjct: 1667 atccaagtgagtcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtg 1608
Query: 804 ctcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaac 863
||| |||||||| || ||||||||||||||||| || ||||| |||||||| || ||
Sbjct: 1607 ctccacaaagaggtcttctccctttctcttgaactttgggtgctctttctgctgaaggac 1548
Query: 864 aaagatgatatctccagtgacagtgtcaggc 894
||| | ||||||||||||||||||||||||
Sbjct: 1547 aaacactatatctccagtgacagtgtcaggc 1517
Score = 99.6 bits (50), Expect = 2e-018
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 1918 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1859
Query: 646 ggcctctggtacatgggcatgccttc 671
||||||||||| || ||||| |||||
Sbjct: 1858 ggcctctggtatatcggcattccttc 1833
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 1251 atgctgcatctgctggatcattccagg 1225
Score = 44.1 bits (22), Expect = 0.078
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 916 aatgtgatcttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttc 975
|||||||||||||| | | ||||| || ||||||||| ||||||||| |||||||||
Sbjct: 1397 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 1338
Query: 976 tc 977
||
Sbjct: 1337 tc 1336
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 101 bits (51), Expect = 4e-019
Identities = 126/151 (83%)
Strand = Plus / Plus
Query: 744 atccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtg 803
|||||||||||||| |||||| ||||||||||||| || ||| || | | || |||||
Sbjct: 15833626 atccaagtgagtcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtg 15833685
Query: 804 ctcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaac 863
||| |||||||| || ||||||||||||||||| || ||||| |||||||| || ||
Sbjct: 15833686 ctccacaaagaggtcttctccctttctcttgaactttgggtgctctttctgctgaaggac 15833745
Query: 864 aaagatgatatctccagtgacagtgtcaggc 894
||| | ||||||||||||||||||||||||
Sbjct: 15833746 aaacactatatctccagtgacagtgtcaggc 15833776
Score = 99.6 bits (50), Expect = 2e-018
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 15833375 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 15833434
Query: 646 ggcctctggtacatgggcatgccttc 671
||||||||||| || ||||| |||||
Sbjct: 15833435 ggcctctggtatatcggcattccttc 15833460
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 15834042 atgctgcatctgctggatcattccagg 15834068
Score = 44.1 bits (22), Expect = 0.078
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 916 aatgtgatcttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttc 975
|||||||||||||| | | ||||| || ||||||||| ||||||||| |||||||||
Sbjct: 15833896 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 15833955
Query: 976 tc 977
||
Sbjct: 15833956 tc 15833957
>emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome 3, BAC clone F26G5
Length = 102873
Score = 101 bits (51), Expect = 4e-019
Identities = 126/151 (83%)
Strand = Plus / Plus
Query: 744 atccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtg 803
|||||||||||||| |||||| ||||||||||||| || ||| || | | || |||||
Sbjct: 50887 atccaagtgagtcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtg 50946
Query: 804 ctcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaac 863
||| |||||||| || ||||||||||||||||| || ||||| |||||||| || ||
Sbjct: 50947 ctccacaaagaggtcttctccctttctcttgaactttgggtgctctttctgctgaaggac 51006
Query: 864 aaagatgatatctccagtgacagtgtcaggc 894
||| | ||||||||||||||||||||||||
Sbjct: 51007 aaacactatatctccagtgacagtgtcaggc 51037
Score = 99.6 bits (50), Expect = 2e-018
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 50636 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 50695
Query: 646 ggcctctggtacatgggcatgccttc 671
||||||||||| || ||||| |||||
Sbjct: 50696 ggcctctggtatatcggcattccttc 50721
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 51303 atgctgcatctgctggatcattccagg 51329
Score = 44.1 bits (22), Expect = 0.078
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 916 aatgtgatcttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttc 975
|||||||||||||| | | ||||| || ||||||||| ||||||||| |||||||||
Sbjct: 51157 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 51216
Query: 976 tc 977
||
Sbjct: 51217 tc 51218
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 101 bits (51), Expect = 4e-019
Identities = 126/151 (83%)
Strand = Plus / Plus
Query: 744 atccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtg 803
|||||||||||||| |||||| ||||||||||||| || ||| || | | || |||||
Sbjct: 15880573 atccaagtgagtcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtg 15880632
Query: 804 ctcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaac 863
||| |||||||| || ||||||||||||||||| || ||||| |||||||| || ||
Sbjct: 15880633 ctccacaaagaggtcttctccctttctcttgaactttgggtgctctttctgctgaaggac 15880692
Query: 864 aaagatgatatctccagtgacagtgtcaggc 894
||| | ||||||||||||||||||||||||
Sbjct: 15880693 aaacactatatctccagtgacagtgtcaggc 15880723
Score = 99.6 bits (50), Expect = 2e-018
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 15880322 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 15880381
Query: 646 ggcctctggtacatgggcatgccttc 671
||||||||||| || ||||| |||||
Sbjct: 15880382 ggcctctggtatatcggcattccttc 15880407
Score = 46.1 bits (23), Expect = 0.020
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1062 atgctgcatttgctggatcattccagg 1088
||||||||| |||||||||||||||||
Sbjct: 15880989 atgctgcatctgctggatcattccagg 15881015
Score = 44.1 bits (22), Expect = 0.078
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 916 aatgtgatcttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttc 975
|||||||||||||| | | ||||| || ||||||||| ||||||||| |||||||||
Sbjct: 15880843 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 15880902
Query: 976 tc 977
||
Sbjct: 15880903 tc 15880904
>gb|BZ769122.1|BZ769122 SALK_141625.50.70.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_141625.50.70.x,
DNA sequence
Length = 304
Score = 99.6 bits (50), Expect = 2e-018
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 14 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 73
Query: 646 ggcctctggtacatgggcatgccttc 671
||||||||||| || ||||| |||||
Sbjct: 74 ggcctctggtatatcggcattccttc 99
Score = 54.0 bits (27), Expect = 8e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 744 atccaagtgagtcacaacaaactggaagccacaca 778
|||||||||||||| |||||| |||||||||||||
Sbjct: 265 atccaagtgagtcagaacaaattggaagccacaca 299
>emb|AJ601167.1| Arabidopsis thaliana T-DNA flanking sequence, right border, clone
521H10, genomic survey sequence
Length = 740
Score = 99.6 bits (50), Expect = 2e-018
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 333 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 274
Query: 646 ggcctctggtacatgggcatgccttc 671
||||||||||| || ||||| |||||
Sbjct: 273 ggcctctggtatatcggcattccttc 248
>gb|H76988.1|H76988 17419 Lambda-PRL2 Arabidopsis thaliana cDNA clone 201A17T7, mRNA
sequence
Length = 332
Score = 99.6 bits (50), Expect = 2e-018
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
|||||||| || ||||||||||||||||| || ||||| |||||||| || ||||| |
Sbjct: 140 aagaggtcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacact 81
Query: 871 atatctccagtgacagtgtcaggcgcttcatcagctt 907
||||||||||||| |||||||||||||||||| ||||
Sbjct: 80 atatctccagtganagtgtcaggcgcttcatctgctt 44
>gb|CD533115.1|CD533115 30C8 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 315
Score = 93.7 bits (47), Expect = 9e-017
Identities = 208/258 (80%), Gaps = 3/258 (1%)
Strand = Plus / Minus
Query: 594 cgagtccgggaactccacc-gagaagtgga-tgtacagcttgcccttcatgaacggcctc 651
|||||||||||||||||| | |||||||| |||| ||||| ||||||||||| ||||||
Sbjct: 262 cgagtccgggaactccacntgtgaagtggaatgtagagcttacccttcatgaatggcctc 203
Query: 652 tggtacatgggcatgccttcgtcg-ttgatcgccttgaaagaatcaggcttcacaacttc 710
||||| || ||||| ||||| ||| || || |||||| | |||||||| ||||| || ||
Sbjct: 202 tggtatatcggcattccttcatcgcttaattgccttgtatgaatcaggtttcacgacctc 143
Query: 711 gcccggatttgatttgatcagcagctgcctgttatccaagtgagtcacaacaaactggaa 770
|| ||||| ||||| || || || ||| |||||||||||||| |||||| |||||
Sbjct: 142 cccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaa 83
Query: 771 gccacacagagattcagtcaaggtcagggtgtgctcgtagaagaggtcatcaccctttct 830
|||||||| || ||| || | | || |||||||| |||||||| || ||||||||
Sbjct: 82 gccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttct 23
Query: 831 cttgaacttgggatgctc 848
||||||||| || |||||
Sbjct: 22 cttgaactttgggtgctc 5
>gb|BP785067.1|BP785067 BP785067 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-93-E15 3',
mRNA sequence
Length = 431
Score = 93.7 bits (47), Expect = 9e-017
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 361 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 420
Query: 646 ggcctctggta 656
|||||||||||
Sbjct: 421 ggcctctggta 431
>gb|BP820929.1|BP820929 BP820929 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-56-D08 5',
mRNA sequence
Length = 391
Score = 93.7 bits (47), Expect = 9e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 73 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 14
Query: 646 ggcctctggta 656
|||||||||||
Sbjct: 13 ggcctctggta 3
>dbj|AK220968.1| Arabidopsis thaliana mRNA for dnaJ protein homolog atj3, complete
cds, clone: RAFL22-56-D08
Length = 493
Score = 93.7 bits (47), Expect = 9e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 586 gggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatgaac 645
||||||| |||||||||||||||||| | |||||||||||| ||||| |||||||||||
Sbjct: 74 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 15
Query: 646 ggcctctggta 656
|||||||||||
Sbjct: 14 ggcctctggta 4
>gb|BZ358530.1|BZ358530 SALK_132923.43.10.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_132923.43.10.x,
DNA sequence
Length = 467
Score = 87.7 bits (44), Expect = 6e-015
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
|||||||| || ||||||||||||||||| || ||||| |||||||| || ||||| |
Sbjct: 191 aagaggtcttctccctttctcttgaacttagggtgctctttctgctgaaggacaaacact 132
Query: 871 atatctccagtgacagtgtcaggc 894
||||||||||||||||||||||||
Sbjct: 131 atatctccagtgacagtgtcaggc 108
>gb|AV544321.1|AV544321 AV544321 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ39f12F 3', mRNA sequence
Length = 471
Score = 87.7 bits (44), Expect = 6e-015
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 329 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 388
Query: 643 aacggcctctggtacatgggcatgccttcgtcgttgatcgccttgaaagaatcagg 698
|||||||| ||||| || ||||| || || || | ||||||||| | ||||||||
Sbjct: 389 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcagg 444
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 85.7 bits (43), Expect = 2e-014
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 6994380 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 6994439
Query: 643 aacggcctctggtacatgggcat 665
|||||||| ||||| || |||||
Sbjct: 6994440 aacggcctttggtatattggcat 6994462
Score = 63.9 bits (32), Expect = 8e-008
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
||||| || ||||||||||| |||||||| || |||||||||||||| | ||||| |
Sbjct: 6994704 aagagatcctcaccctttcttttgaactttgggtgctccttctgctgaatgacaaacact 6994763
Query: 871 atatctccagtgacagtgtcaggc 894
|||||||| |||||||| ||||||
Sbjct: 6994764 atatctccggtgacagtatcaggc 6994787
Score = 58.0 bits (29), Expect = 5e-006
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 1057 caaggatgctgcatttgctggatcattccaggccccaactgcctgatttggaccttaaag 1116
|||| |||||||| ||||| ||||||||||| || ||||||||||| || ||| |
Sbjct: 6995034 caagcatgctgcacctgctgcatcattccaggtccaaactgcctgatcgagatcttcatt 6995093
Query: 1117 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaaccctt 1169
|| |||||||| || ||| |||| || ||||||||||||||||||||||||
Sbjct: 6995094 cccgaaccttgacagccaccacatttcattgaagctccagactttgaaccctt 6995146
Score = 54.0 bits (27), Expect = 8e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctc 1427
|||||||| |||||||| ||||| || |||||||| |||||||||||
Sbjct: 6995458 cccattccttccttgagtgcatcttccccatattgatcatagatctc 6995504
Score = 44.1 bits (22), Expect = 0.078
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 721 gatttgatcagcagctgcctgttatccaagtgagtcacaacaaactggaagccacaca 778
|||||||| || ||||| || || ||||| || |||| |||||||||||||||||||
Sbjct: 6994614 gatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaagccacaca 6994671
>emb|AL589883.1|ATT6G21 Arabidopsis thaliana DNA chromosome 5, BAC clone T6G21 (ESSA project)
Length = 149788
Score = 85.7 bits (43), Expect = 2e-014
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 71727 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 71786
Query: 643 aacggcctctggtacatgggcat 665
|||||||| ||||| || |||||
Sbjct: 71787 aacggcctttggtatattggcat 71809
Score = 63.9 bits (32), Expect = 8e-008
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
||||| || ||||||||||| |||||||| || |||||||||||||| | ||||| |
Sbjct: 72051 aagagatcctcaccctttcttttgaactttgggtgctccttctgctgaatgacaaacact 72110
Query: 871 atatctccagtgacagtgtcaggc 894
|||||||| |||||||| ||||||
Sbjct: 72111 atatctccggtgacagtatcaggc 72134
Score = 58.0 bits (29), Expect = 5e-006
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 1057 caaggatgctgcatttgctggatcattccaggccccaactgcctgatttggaccttaaag 1116
|||| |||||||| ||||| ||||||||||| || ||||||||||| || ||| |
Sbjct: 72381 caagcatgctgcacctgctgcatcattccaggtccaaactgcctgatcgagatcttcatt 72440
Query: 1117 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaaccctt 1169
|| |||||||| || ||| |||| || ||||||||||||||||||||||||
Sbjct: 72441 cccgaaccttgacagccaccacatttcattgaagctccagactttgaaccctt 72493
Score = 54.0 bits (27), Expect = 8e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctc 1427
|||||||| |||||||| ||||| || |||||||| |||||||||||
Sbjct: 72805 cccattccttccttgagtgcatcttccccatattgatcatagatctc 72851
Score = 44.1 bits (22), Expect = 0.078
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 721 gatttgatcagcagctgcctgttatccaagtgagtcacaacaaactggaagccacaca 778
|||||||| || ||||| || || ||||| || |||| |||||||||||||||||||
Sbjct: 71961 gatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaagccacaca 72018
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 85.7 bits (43), Expect = 2e-014
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 7304012 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 7304071
Query: 643 aacggcctctggtacatgggcat 665
|||||||| ||||| || |||||
Sbjct: 7304072 aacggcctttggtatattggcat 7304094
Score = 63.9 bits (32), Expect = 8e-008
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 811 aagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaagatg 870
||||| || ||||||||||| |||||||| || |||||||||||||| | ||||| |
Sbjct: 7304336 aagagatcctcaccctttcttttgaactttgggtgctccttctgctgaatgacaaacact 7304395
Query: 871 atatctccagtgacagtgtcaggc 894
|||||||| |||||||| ||||||
Sbjct: 7304396 atatctccggtgacagtatcaggc 7304419
Score = 58.0 bits (29), Expect = 5e-006
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 1057 caaggatgctgcatttgctggatcattccaggccccaactgcctgatttggaccttaaag 1116
|||| |||||||| ||||| ||||||||||| || ||||||||||| || ||| |
Sbjct: 7304666 caagcatgctgcacctgctgcatcattccaggtccaaactgcctgatcgagatcttcatt 7304725
Query: 1117 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaaccctt 1169
|| |||||||| || ||| |||| || ||||||||||||||||||||||||
Sbjct: 7304726 cccgaaccttgacagccaccacatttcattgaagctccagactttgaaccctt 7304778
Score = 54.0 bits (27), Expect = 8e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctc 1427
|||||||| |||||||| ||||| || |||||||| |||||||||||
Sbjct: 7305090 cccattccttccttgagtgcatcttccccatattgatcatagatctc 7305136
Score = 44.1 bits (22), Expect = 0.078
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 721 gatttgatcagcagctgcctgttatccaagtgagtcacaacaaactggaagccacaca 778
|||||||| || ||||| || || ||||| || |||| |||||||||||||||||||
Sbjct: 7304246 gatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaagccacaca 7304303
>gb|BP787373.1|BP787373 BP787373 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-04-A18 3',
mRNA sequence
Length = 429
Score = 83.8 bits (42), Expect = 9e-014
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 583 tccgggctcagcgagtccgggaactccaccgagaagtggatgtacagcttgcccttcatg 642
|||||||||||||| |||||||| || |||| |||||| ||||| ||||| |||||||||
Sbjct: 350 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 409
Query: 643 aacggcctctggta 656
|||||||| |||||
Sbjct: 410 aacggcctttggta 423
>gb|CB258912.1|CB258912 09-E011082-014-003-B03-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771B033Q 5-PRIME, mRNA sequence
Length = 513
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 324 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 265
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 264 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 205
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 204 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 145
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 144 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 93
>gb|AV526975.1|AV526975 AV526975 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZ25e12R 5', mRNA
sequence
Length = 447
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 362 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 303
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 302 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 243
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 242 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 183
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 182 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 131
>gb|AV524937.2|AV524937 AV524937 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APD13c02R 5', mRNA
sequence
Length = 569
Score = 79.8 bits (40), Expect = 1e-012
Identities = 184/232 (79%)
Strand = Plus / Minus
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| || |||
Sbjct: 343 cccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttctccggg 284
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || || || |||||| | || |||| |||||| ||||||||||| || || |||||
Sbjct: 283 tcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccaccctta 224
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
|| || || |||||||| ||||| || ||| || |||||||| || || |||| |||
Sbjct: 223 tcaggatgattcttgatagcggcttttttgtaagctttcttgagatcttctggtgaagcg 164
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcg 1612
||| | ||| || | |||||||||| || |||||||||||||||||||
Sbjct: 163 ctcttaggaacacctaagatctcgtagaacttagtgttgtcgctcttcttcg 112
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 831,405
Number of Sequences: 1013581
Number of extensions: 831405
Number of successful extensions: 73008
Number of sequences better than 0.5: 124
Number of HSP's better than 0.5 without gapping: 117
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 70931
Number of HSP's gapped (non-prelim): 2068
length of query: 1681
length of database: 908,940,872
effective HSP length: 21
effective length of query: 1660
effective length of database: 887,655,671
effective search space: 1473508413860
effective search space used: 1473508413860
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)