BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192958.2.2
(1723 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|BX831588.1|CNS0A0V0 Arabidopsis thaliana Full-length cD... 188 2e-045
dbj|AK118386.1| Arabidopsis thaliana At5g22060 mRNA for put... 188 2e-045
ref|NM_122127.2| Arabidopsis thaliana ATJ2 AT5G22060 (ATJ2)... 188 2e-045
gb|L36113.1|ATHATJ Arabidopsis thaliana chaperone protein (... 180 5e-043
emb|BX830687.1|CNS0A0QX Arabidopsis thaliana Full-length cD... 174 3e-041
gb|AY035087.1| Arabidopsis thaliana putative dnaJ protein h... 167 8e-039
gb|AY113878.1| Arabidopsis thaliana putative DnaJ-like prot... 167 8e-039
emb|AX506322.1| Sequence 1017 from Patent WO0216655 167 8e-039
ref|NM_114279.2| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3)... 167 8e-039
gb|U22340.1|ATU22340 Arabidopsis thaliana DnaJ homolog (atj... 159 2e-036
gb|AY045655.1| Arabidopsis thaliana AT3g44110/F26G5_60 mRNA... 159 2e-036
gb|AY088078.1| Arabidopsis thaliana clone 40976 mRNA, compl... 159 2e-036
gb|AV524587.1|AV524587 AV524587 Arabidopsis thaliana aboveg... 155 3e-035
gb|CB259915.1|CB259915 13-E9624-013-004-J03-T7R MPIZ-ADIS-0... 143 1e-031
ref|NM_180322.1| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3)... 133 1e-028
gb|BU636099.1|BU636099 045E06 Infected Arabidopsis Leaf Ara... 127 7e-027
gb|AV824391.1|AV824391 AV824391 RAFL6 Arabidopsis thaliana ... 121 4e-025
gb|AU239248.1|AU239248 AU239248 RAFL19 Arabidopsis thaliana... 121 4e-025
gb|AV550422.1|AV550422 AV550422 Arabidopsis thaliana roots ... 121 4e-025
gb|BP820203.1|BP820203 BP820203 RAFL19 Arabidopsis thaliana... 121 4e-025
gb|BP820336.1|BP820336 BP820336 RAFL19 Arabidopsis thaliana... 121 4e-025
gb|BP847929.1|BP847929 BP847929 RAFL21 Arabidopsis thaliana... 121 4e-025
gb|BP853093.1|BP853093 BP853093 RAFL21 Arabidopsis thaliana... 121 4e-025
gb|BP855038.1|BP855038 BP855038 RAFL21 Arabidopsis thaliana... 121 4e-025
gb|BP855559.1|BP855559 BP855559 RAFL21 Arabidopsis thaliana... 121 4e-025
gb|BP859641.1|BP859641 BP859641 RAFL21 Arabidopsis thaliana... 121 4e-025
gb|BP865537.1|BP865537 BP865537 RAFL21 Arabidopsis thaliana... 121 4e-025
gb|AV821835.1|AV821835 AV821835 RAFL4 Arabidopsis thaliana ... 115 3e-023
gb|BP832844.1|BP832844 BP832844 RAFL19 Arabidopsis thaliana... 115 3e-023
gb|CB258912.1|CB258912 09-E011082-014-003-B03-T7R MPIZ-ADIS... 113 1e-022
gb|AV526975.1|AV526975 AV526975 Arabidopsis thaliana aboveg... 113 1e-022
gb|AV524937.2|AV524937 AV524937 Arabidopsis thaliana aboveg... 113 1e-022
gb|AV540757.1|AV540757 AV540757 Arabidopsis thaliana roots ... 113 1e-022
gb|CK119390.1|CK119390 201l01.p1 AtM1 Arabidopsis thaliana ... 113 1e-022
gb|BP561192.1|BP561192 BP561192 RAFL6 Arabidopsis thaliana ... 113 1e-022
gb|BP561520.2|BP561520 BP561520 RAFL8 Arabidopsis thaliana ... 113 1e-022
gb|BP812305.1|BP812305 BP812305 RAFL19 Arabidopsis thaliana... 113 1e-022
gb|BP819333.1|BP819333 BP819333 RAFL19 Arabidopsis thaliana... 113 1e-022
gb|BP820936.1|BP820936 BP820936 RAFL19 Arabidopsis thaliana... 113 1e-022
gb|BP821075.1|BP821075 BP821075 RAFL19 Arabidopsis thaliana... 113 1e-022
gb|BP825757.1|BP825757 BP825757 RAFL19 Arabidopsis thaliana... 113 1e-022
gb|BP831553.1|BP831553 BP831553 RAFL19 Arabidopsis thaliana... 113 1e-022
gb|BP835283.1|BP835283 BP835283 RAFL19 Arabidopsis thaliana... 113 1e-022
gb|BP851282.1|BP851282 BP851282 RAFL21 Arabidopsis thaliana... 113 1e-022
gb|BP865904.1|BP865904 BP865904 RAFL21 Arabidopsis thaliana... 113 1e-022
gb|BP867654.1|BP867654 BP867654 RAFL21 Arabidopsis thaliana... 113 1e-022
gb|BE527925.1|BE527925 M70M03STM Arabidopsis developing see... 111 4e-022
gb|BP837230.1|BP837230 BP837230 RAFL19 Arabidopsis thaliana... 111 4e-022
gb|T76230.1|T76230 11008 Lambda-PRL2 Arabidopsis thaliana c... 107 6e-021
gb|BP817250.1|BP817250 BP817250 RAFL19 Arabidopsis thaliana... 107 6e-021
gb|BP851122.1|BP851122 BP851122 RAFL21 Arabidopsis thaliana... 105 3e-020
gb|R29960.1|R29960 12565 Lambda-PRL2 Arabidopsis thaliana c... 103 1e-019
gb|BE526451.1|BE526451 M65D04STM Arabidopsis developing see... 101 4e-019
gb|BZ769122.1|BZ769122 SALK_141625.50.70.x Arabidopsis thal... 100 2e-018
emb|AJ601167.1| Arabidopsis thaliana T-DNA flanking sequenc... 100 2e-018
gb|AV785278.1|AV785278 AV785278 RAFL6 Arabidopsis thaliana ... 100 2e-018
gb|AV785374.1|AV785374 AV785374 RAFL6 Arabidopsis thaliana ... 100 2e-018
gb|AV531399.1|AV531399 AV531399 Arabidopsis thaliana flower... 100 2e-018
gb|AV542282.1|AV542282 AV542282 Arabidopsis thaliana roots ... 100 2e-018
gb|AV562719.1|AV562719 AV562719 Arabidopsis thaliana green ... 100 2e-018
gb|U64912.1|ATU64912 Arabidopsis thaliana farnesylated prot... 100 2e-018
gb|AF032883.1|AF032883 Arabidopsis thaliana DnaJ homolog At... 100 2e-018
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 100 2e-018
emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome ... 100 2e-018
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 100 2e-018
gb|AV538224.1|AV538224 AV538224 Arabidopsis thaliana roots ... 96 2e-017
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 96 2e-017
emb|AL589883.1|ATT6G21 Arabidopsis thaliana DNA chromosome ... 96 2e-017
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 96 2e-017
gb|BP816535.1|BP816535 BP816535 RAFL19 Arabidopsis thaliana... 94 1e-016
gb|CA781754.1|CA781754 048C12AF Infected Arabidopsis Leaf A... 92 4e-016
gb|AV518673.2|AV518673 AV518673 Arabidopsis thaliana aboveg... 92 4e-016
gb|BP846461.1|BP846461 BP846461 RAFL21 Arabidopsis thaliana... 92 4e-016
gb|H76192.1|H76192 17897 Lambda-PRL2 Arabidopsis thaliana c... 88 6e-015
gb|BP806707.1|BP806707 BP806707 RAFL16 Arabidopsis thaliana... 86 2e-014
gb|BP813111.1|BP813111 BP813111 RAFL19 Arabidopsis thaliana... 86 2e-014
gb|B22771.1|B22771 F22A1TR IGF Arabidopsis thaliana genomic... 84 9e-014
gb|AV782390.1|AV782390 AV782390 RAFL4 Arabidopsis thaliana ... 84 9e-014
gb|AV542350.1|AV542350 AV542350 Arabidopsis thaliana roots ... 84 9e-014
gb|H76988.1|H76988 17419 Lambda-PRL2 Arabidopsis thaliana c... 82 4e-013
gb|BE523152.1|BE523152 M33A2STM Arabidopsis developing seed... 82 4e-013
gb|BP851351.1|BP851351 BP851351 RAFL21 Arabidopsis thaliana... 80 1e-012
gb|BP856956.1|BP856956 BP856956 RAFL21 Arabidopsis thaliana... 78 6e-012
gb|BP861198.1|BP861198 BP861198 RAFL21 Arabidopsis thaliana... 78 6e-012
gb|T43662.1|T43662 6925 Lambda-PRL2 Arabidopsis thaliana cD... 74 9e-011
gb|AV544321.1|AV544321 AV544321 Arabidopsis thaliana roots ... 74 9e-011
gb|BE523253.1|BE523253 M33C6STM Arabidopsis developing seed... 70 1e-009
gb|BP785067.1|BP785067 BP785067 RAFL7 Arabidopsis thaliana ... 70 1e-009
gb|BP820929.1|BP820929 BP820929 RAFL19 Arabidopsis thaliana... 70 1e-009
dbj|AK220968.1| Arabidopsis thaliana mRNA for dnaJ protein ... 70 1e-009
gb|AV785973.1|AV785973 AV785973 RAFL6 Arabidopsis thaliana ... 68 6e-009
gb|AV794173.1|AV794173 AV794173 RAFL8 Arabidopsis thaliana ... 68 6e-009
gb|CD533115.1|CD533115 30C8 Arabidopsis Leaf Senescence Lib... 68 6e-009
gb|B22558.1|B22558 F20H6TF IGF Arabidopsis thaliana genomic... 66 2e-008
gb|F15464.1|F15464 ATTS5712 Ors-B Arabidopsis thaliana cDNA... 66 2e-008
gb|R30458.1|R30458 13063 Lambda-PRL2 Arabidopsis thaliana c... 66 2e-008
gb|CL468879.1|CL468879 SAIL_1292_G03.v1 SAIL Collection Ara... 62 3e-007
gb|BP801575.1|BP801575 BP801575 RAFL14 Arabidopsis thaliana... 62 3e-007
gb|BP787373.1|BP787373 BP787373 RAFL7 Arabidopsis thaliana ... 60 1e-006
gb|T41588.1|T41588 10169 Lambda-PRL2 Arabidopsis thaliana c... 58 5e-006
gb|AI999092.1|AI999092 701554435 A. thaliana, Columbia Col-... 58 5e-006
gb|AV789064.1|AV789064 AV789064 RAFL6 Arabidopsis thaliana ... 58 5e-006
gb|AV794879.1|AV794879 AV794879 RAFL8 Arabidopsis thaliana ... 58 5e-006
gb|AV795091.1|AV795091 AV795091 RAFL8 Arabidopsis thaliana ... 58 5e-006
gb|AV798652.1|AV798652 AV798652 RAFL9 Arabidopsis thaliana ... 58 5e-006
gb|AV803620.1|AV803620 AV803620 RAFL9 Arabidopsis thaliana ... 58 5e-006
gb|AV804805.1|AV804805 AV804805 RAFL9 Arabidopsis thaliana ... 58 5e-006
gb|AV804914.1|AV804914 AV804914 RAFL9 Arabidopsis thaliana ... 58 5e-006
gb|AV807401.1|AV807401 AV807401 RAFL9 Arabidopsis thaliana ... 58 5e-006
gb|AV808755.1|AV808755 AV808755 RAFL9 Arabidopsis thaliana ... 58 5e-006
gb|AV816259.1|AV816259 AV816259 RAFL9 Arabidopsis thaliana ... 58 5e-006
gb|AV817667.1|AV817667 AV817667 RAFL9 Arabidopsis thaliana ... 58 5e-006
gb|AV819751.1|AV819751 AV819751 RAFL11 Arabidopsis thaliana... 58 5e-006
gb|AV819922.1|AV819922 AV819922 RAFL11 Arabidopsis thaliana... 58 5e-006
gb|AV546641.1|AV546641 AV546641 Arabidopsis thaliana roots ... 58 5e-006
gb|AV561687.1|AV561687 AV561687 Arabidopsis thaliana green ... 58 5e-006
gb|BP571980.1|BP571980 BP571980 RAFL14 Arabidopsis thaliana... 58 5e-006
gb|BP577517.1|BP577517 BP577517 RAFL14 Arabidopsis thaliana... 58 5e-006
gb|BP584223.1|BP584223 BP584223 RAFL14 Arabidopsis thaliana... 58 5e-006
gb|BP589773.1|BP589773 BP589773 RAFL15 Arabidopsis thaliana... 58 5e-006
gb|BP589938.1|BP589938 BP589938 RAFL15 Arabidopsis thaliana... 58 5e-006
gb|BP620954.1|BP620954 BP620954 RAFL16 Arabidopsis thaliana... 58 5e-006
gb|BP624922.1|BP624922 BP624922 RAFL17 Arabidopsis thaliana... 58 5e-006
gb|BP625703.1|BP625703 BP625703 RAFL17 Arabidopsis thaliana... 58 5e-006
gb|BP630364.1|BP630364 BP630364 RAFL17 Arabidopsis thaliana... 58 5e-006
gb|BP633767.1|BP633767 BP633767 RAFL17 Arabidopsis thaliana... 58 5e-006
gb|BP634636.1|BP634636 BP634636 RAFL17 Arabidopsis thaliana... 58 5e-006
gb|BP641882.1|BP641882 BP641882 RAFL19 Arabidopsis thaliana... 58 5e-006
gb|BP643486.1|BP643486 BP643486 RAFL19 Arabidopsis thaliana... 58 5e-006
gb|BP658449.1|BP658449 BP658449 RAFL19 Arabidopsis thaliana... 58 5e-006
gb|BP662467.1|BP662467 BP662467 RAFL21 Arabidopsis thaliana... 58 5e-006
gb|BP662688.1|BP662688 BP662688 RAFL21 Arabidopsis thaliana... 58 5e-006
gb|BP671953.1|BP671953 BP671953 RAFL21 Arabidopsis thaliana... 58 5e-006
gb|BP783083.1|BP783083 BP783083 RAFL7 Arabidopsis thaliana ... 58 5e-006
gb|BP783128.1|BP783128 BP783128 RAFL7 Arabidopsis thaliana ... 58 5e-006
gb|BP784896.1|BP784896 BP784896 RAFL7 Arabidopsis thaliana ... 58 5e-006
gb|BP786416.1|BP786416 BP786416 RAFL7 Arabidopsis thaliana ... 58 5e-006
gb|BP793258.1|BP793258 BP793258 RAFL7 Arabidopsis thaliana ... 58 5e-006
gb|AV805037.1|AV805037 AV805037 RAFL9 Arabidopsis thaliana ... 56 2e-005
gb|CA963966.1|CA963966 cATI008A10AF Infected Arabidopsis Le... 56 2e-005
gb|BP585247.1|BP585247 BP585247 RAFL15 Arabidopsis thaliana... 56 2e-005
gb|BP595678.1|BP595678 BP595678 RAFL15 Arabidopsis thaliana... 56 2e-005
gb|BP787235.1|BP787235 BP787235 RAFL7 Arabidopsis thaliana ... 56 2e-005
gb|BP805075.1|BP805075 BP805075 RAFL16 Arabidopsis thaliana... 56 2e-005
emb|CR381175.1| Arabidopsis thaliana transposon insertion S... 56 2e-005
gb|BE528498.1|BE528498 M79N03STM Arabidopsis developing see... 54 8e-005
gb|AV793801.1|AV793801 AV793801 RAFL8 Arabidopsis thaliana ... 54 8e-005
gb|CF773709.1|CF773709 AG_FSL_21E01 Arabidopsis ag-1 35S:AG... 54 8e-005
gb|BP594232.1|BP594232 BP594232 RAFL15 Arabidopsis thaliana... 54 8e-005
gb|BP783214.1|BP783214 BP783214 RAFL7 Arabidopsis thaliana ... 54 8e-005
gb|BP836611.1|BP836611 BP836611 RAFL19 Arabidopsis thaliana... 54 8e-005
gb|BH251731.1|BH251731 SALK_012035 Arabidopsis thaliana TDN... 52 3e-004
gb|Z18100.1|Z18100 ATTS0589 Versailles-VB Arabidopsis thali... 52 3e-004
gb|F20031.1|F20031 ATTS6070 AC16H Arabidopsis thaliana cDNA... 52 3e-004
gb|C99756.1|C99756 C99756 YAC clone CIC7E11 region-specific... 52 3e-004
gb|AV795946.1|AV795946 AV795946 RAFL8 Arabidopsis thaliana ... 52 3e-004
gb|AV804585.1|AV804585 AV804585 RAFL9 Arabidopsis thaliana ... 52 3e-004
gb|AV561974.1|AV561974 AV561974 Arabidopsis thaliana green ... 52 3e-004
gb|AV566588.1|AV566588 AV566588 Arabidopsis thaliana green ... 52 3e-004
gb|BP566081.1|BP566081 BP566081 RAFL14 Arabidopsis thaliana... 52 3e-004
gb|BP574880.1|BP574880 BP574880 RAFL14 Arabidopsis thaliana... 52 3e-004
gb|BP612298.1|BP612298 BP612298 RAFL16 Arabidopsis thaliana... 52 3e-004
gb|BP665864.1|BP665864 BP665864 RAFL21 Arabidopsis thaliana... 52 3e-004
gb|BP668598.1|BP668598 BP668598 RAFL21 Arabidopsis thaliana... 52 3e-004
gb|BP781067.1|BP781067 BP781067 RAFL7 Arabidopsis thaliana ... 52 3e-004
gb|BP791689.1|BP791689 BP791689 RAFL7 Arabidopsis thaliana ... 52 3e-004
gb|AV521330.1|AV521330 AV521330 Arabidopsis thaliana aboveg... 50 0.001
gb|BP591162.1|BP591162 BP591162 RAFL15 Arabidopsis thaliana... 50 0.001
gb|BP591799.1|BP591799 BP591799 RAFL15 Arabidopsis thaliana... 50 0.001
gb|BP660166.1|BP660166 BP660166 RAFL19 Arabidopsis thaliana... 50 0.001
gb|BP664920.1|BP664920 BP664920 RAFL21 Arabidopsis thaliana... 50 0.001
gb|BP847945.1|BP847945 BP847945 RAFL21 Arabidopsis thaliana... 50 0.001
gb|CL477480.1|CL477480 SAIL_274_A01.v1 SAIL Collection Arab... 48 0.005
gb|AA067437.1|AA067437 26282 Lambda-PRL2 Arabidopsis thalia... 48 0.005
gb|T43233.1|T43233 6496 Lambda-PRL2 Arabidopsis thaliana cD... 48 0.005
gb|AV793490.1|AV793490 AV793490 RAFL8 Arabidopsis thaliana ... 48 0.005
gb|AV796965.1|AV796965 AV796965 RAFL9 Arabidopsis thaliana ... 48 0.005
gb|BP646511.1|BP646511 BP646511 RAFL19 Arabidopsis thaliana... 48 0.005
gb|BP661444.1|BP661444 BP661444 RAFL21 Arabidopsis thaliana... 48 0.005
gb|BP670769.1|BP670769 BP670769 RAFL21 Arabidopsis thaliana... 48 0.005
gb|B26210.1|B26210 T4L6TFB TAMU Arabidopsis thaliana genomi... 46 0.020
emb|AL089832.1|CNS00TL6 Arabidopsis thaliana genome survey ... 46 0.020
gb|T22486.1|T22486 4494 Lambda-PRL2 Arabidopsis thaliana cD... 46 0.020
gb|N37456.1|N37456 18683 Lambda-PRL2 Arabidopsis thaliana c... 46 0.020
gb|BP847336.1|BP847336 BP847336 RAFL21 Arabidopsis thaliana... 46 0.020
emb|AJ529236.1|ATH529236 Arabidopsis thaliana T-DNA flankin... 46 0.020
emb|AJ529837.1|ATH529837 Arabidopsis thaliana T-DNA flankin... 46 0.020
gb|BE845095.1|BE845095 AD06E12T7 AD A. thaliana (Col-0 gl1)... 44 0.080
gb|AU230536.1|AU230536 AU230536 RAFL19 Arabidopsis thaliana... 44 0.080
gb|AI100128.1|AI100128 34503 Lambda-PRL2 Arabidopsis thalia... 42 0.32
gb|AV518231.1|AV518231 AV518231 Arabidopsis thaliana aboveg... 42 0.32
gb|AV549224.1|AV549224 AV549224 Arabidopsis thaliana roots ... 42 0.32
gb|BP592045.1|BP592045 BP592045 RAFL15 Arabidopsis thaliana... 42 0.32
gb|BP639833.1|BP639833 BP639833 RAFL19 Arabidopsis thaliana... 42 0.32
gb|BP654182.1|BP654182 BP654182 RAFL19 Arabidopsis thaliana... 42 0.32
gb|B25069.1|B25069 F24J14TR IGF Arabidopsis thaliana genomi... 40 1.2
gb|BH757696.1|BH757696 SALK_004406.42.10.x Arabidopsis thal... 40 1.2
emb|AJ596042.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 1.2
gb|AI997521.1|AI997521 701554392 A. thaliana, Columbia Col-... 40 1.2
gb|AV542537.1|AV542537 AV542537 Arabidopsis thaliana roots ... 40 1.2
gb|BP586464.1|BP586464 BP586464 RAFL15 Arabidopsis thaliana... 40 1.2
gb|BP591132.1|BP591132 BP591132 RAFL15 Arabidopsis thaliana... 40 1.2
gb|AY081346.1| Arabidopsis thaliana unknown protein (At5g64... 40 1.2
gb|AY128843.1| Arabidopsis thaliana unknown protein (At5g64... 40 1.2
gb|AY085231.1| Arabidopsis thaliana clone 14033 mRNA, compl... 40 1.2
gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11... 40 1.2
emb|BX832516.1|CNS0A0XV Arabidopsis thaliana Full-length cD... 40 1.2
dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosom... 40 1.2
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 40 1.2
ref|NM_104665.1| Arabidopsis thaliana heat shock protein bi... 40 1.2
ref|NM_125863.2| Arabidopsis thaliana structural constituen... 40 1.2
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 40 1.2
emb|AL947017.1| Arabidopsis thaliana T-DNA flanking sequenc... 38 4.9
emb|AL947019.1| Arabidopsis thaliana T-DNA flanking sequenc... 38 4.9
gb|BP622335.1|BP622335 BP622335 RAFL17 Arabidopsis thaliana... 38 4.9
gb|BP659683.1|BP659683 BP659683 RAFL19 Arabidopsis thaliana... 38 4.9
gb|BP833672.1|BP833672 BP833672 RAFL19 Arabidopsis thaliana... 38 4.9
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 38 4.9
emb|AX510222.1| Sequence 4917 from Patent WO0216655 38 4.9
gb|BT004062.1| Arabidopsis thaliana clone RAFL15-06-A12 (R2... 38 4.9
gb|BT005141.1| Arabidopsis thaliana clone U20508 unknown pr... 38 4.9
gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV... 38 4.9
gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V ma... 38 4.9
gb|AC051630.4|AC051630 Arabidopsis thaliana chromosome 1 BA... 38 4.9
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 38 4.9
emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome... 38 4.9
emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosom... 38 4.9
emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosom... 38 4.9
emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ... 38 4.9
ref|NM_122469.2| Arabidopsis thaliana unknown protein AT5G2... 38 4.9
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 38 4.9
>emb|BX831588.1|CNS0A0V0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH17ZB05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1489
Score = 188 bits (95), Expect = 2e-045
Identities = 314/387 (81%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 1134 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 1075
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| |||||| || |||||||| || || ||
Sbjct: 1074 ttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttgacgacctc 1015
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| || | ||||||||||||||||| || ||||||| ||| || | ||||| |||||
Sbjct: 1014 tccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaa 955
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| | || ||||| ||||| | ||||||||| |||||||| |||||||||||
Sbjct: 954 gccacacaaggcctcggttagagagatggtgtgctccacaaagagatcctcaccctttct 895
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||||||| | ||| ||||||||||| | ||| || || || ||||| || || |||||
Sbjct: 894 tttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtgacagtatc 835
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| |||| ||| ||| ||||||||||| |||||||||||||||||||
Sbjct: 834 aggcgcttcatcggcttgtccactgaatgtgatcttctgattgtgttgcattcccttctc 775
Query: 992 aacatgaacctcaagaaccttcttctc 1018
|||| || ||||| |||||||||||
Sbjct: 774 cacatttacttcaagcaccttcttctc 748
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 350 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 291
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 290 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 231
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 230 cccttatcaggatggtttttgatagcggc 202
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 1246 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 1201
>dbj|AK118386.1| Arabidopsis thaliana At5g22060 mRNA for putative DNAJ PROTEIN HOMOLOG
ATJ, complete cds, clone: RAFL19-64-P10
Length = 1451
Score = 188 bits (95), Expect = 2e-045
Identities = 314/387 (81%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 1116 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 1057
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| |||||| || |||||||| || || ||
Sbjct: 1056 ttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttgacgacctc 997
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| || | ||||||||||||||||| || ||||||| ||| || | ||||| |||||
Sbjct: 996 tccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaa 937
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| | || ||||| ||||| | ||||||||| |||||||| |||||||||||
Sbjct: 936 gccacacaaggcctcggttagagagatggtgtgctccacaaagagatcctcaccctttct 877
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||||||| | ||| ||||||||||| | ||| || || || ||||| || || |||||
Sbjct: 876 tttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtgacagtatc 817
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| |||| ||| ||| ||||||||||| |||||||||||||||||||
Sbjct: 816 aggcgcttcatcggcttgtccactgaatgtgatcttctgattgtgttgcattcccttctc 757
Query: 992 aacatgaacctcaagaaccttcttctc 1018
|||| || ||||| |||||||||||
Sbjct: 756 cacatttacttcaagcaccttcttctc 730
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 332 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 273
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 272 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 213
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 212 cccttatcaggatggtttttgatagcggc 184
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 1228 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 1183
>ref|NM_122127.2| Arabidopsis thaliana ATJ2 AT5G22060 (ATJ2) mRNA, complete cds
Length = 1565
Score = 188 bits (95), Expect = 2e-045
Identities = 314/387 (81%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 1170 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 1111
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| |||||| || |||||||| || || ||
Sbjct: 1110 ttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttgacgacctc 1051
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| || | ||||||||||||||||| || ||||||| ||| || | ||||| |||||
Sbjct: 1050 tccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaa 991
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| | || ||||| ||||| | ||||||||| |||||||| |||||||||||
Sbjct: 990 gccacacaaggcctcggttagagagatggtgtgctccacaaagagatcctcaccctttct 931
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||||||| | ||| ||||||||||| | ||| || || || ||||| || || |||||
Sbjct: 930 tttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtgacagtatc 871
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| |||| ||| ||| ||||||||||| |||||||||||||||||||
Sbjct: 870 aggcgcttcatcggcttgtccactgaatgtgatcttctgattgtgttgcattcccttctc 811
Query: 992 aacatgaacctcaagaaccttcttctc 1018
|||| || ||||| |||||||||||
Sbjct: 810 cacatttacttcaagcaccttcttctc 784
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 386 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 327
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 326 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 267
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 266 cccttatcaggatggtttttgatagcggc 238
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 1282 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 1237
>gb|L36113.1|ATHATJ Arabidopsis thaliana chaperone protein (atj) mRNA, complete cds
Length = 1443
Score = 180 bits (91), Expect = 5e-043
Identities = 313/387 (80%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| || ||
Sbjct: 1104 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggact 1045
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| |||||| || |||||||| || || ||
Sbjct: 1044 ttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttgacgacctc 985
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| || | ||||||||||||||||| || ||||||| ||| || | ||||| |||||
Sbjct: 984 tccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaa 925
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| | || ||||| ||||| | ||||||||| |||||||| |||||||||||
Sbjct: 924 gccacacaaggcctcggttagagagatggtgtgctccacaaagagatcctcaccctttct 865
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||||||| | ||| ||||||||||| | ||| || || || ||||| || || |||||
Sbjct: 864 tttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtgacagtatc 805
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| |||| ||| ||| ||||||||||| |||||||||||||||||||
Sbjct: 804 aggcgcttcatcggcttgtccactgaatgtgatcttctgattgtgttgcattcccttctc 745
Query: 992 aacatgaacctcaagaaccttcttctc 1018
|||| || ||||| |||||||||||
Sbjct: 744 cacatttacttcaagcaccttcttctc 718
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 320 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 261
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 260 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 201
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 200 cccttatcaggatggtttttgatagcggc 172
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 1216 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 1171
>emb|BX830687.1|CNS0A0QX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS14ZE01 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1491
Score = 174 bits (88), Expect = 3e-041
Identities = 314/388 (80%), Gaps = 1/388 (0%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 1130 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 1071
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| |||||| || |||||||| || || ||
Sbjct: 1070 ttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttgacgacctc 1011
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| || | ||||||||||||||||| || ||||||| ||| || | ||||| |||||
Sbjct: 1010 tccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaa 951
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| | || ||||| ||||| | ||||||||| |||||||| |||||||||||
Sbjct: 950 gccacacaaggcctcggttagagagatggtgtgctccacaaagagatcctcaccctttct 891
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||||||| | ||| ||||||||||| | ||| || || || ||||| || || |||||
Sbjct: 890 tttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtgacagtatc 831
Query: 932 aggcgcttcatcagcttcacca-gggaaggtgatcttctggctgtgttgcattcccttct 990
|||||||||||| |||| ||| | || ||||||||||| ||||||||||||||||||
Sbjct: 830 aggcgcttcatcggcttgtccactgtaatgtgatcttctgattgtgttgcattcccttct 771
Query: 991 caacatgaacctcaagaaccttcttctc 1018
| |||| || ||||| |||||||||||
Sbjct: 770 ccacatttacttcaagcaccttcttctc 743
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 345 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 286
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 285 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 226
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || |||| |||||||||||
Sbjct: 225 cccttatcaggatggtctttgatagcggc 197
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 1242 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 1197
>gb|AY035087.1| Arabidopsis thaliana putative dnaJ protein homolog atj3 (At3g44110)
mRNA, complete cds
Length = 1653
Score = 167 bits (84), Expect = 8e-039
Identities = 309/384 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 1151 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 1092
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 1091 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 1032
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 1031 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 972
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 971 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 912
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
|||||| | ||| || |||||||| ||||| || || || |||||||| || || |||||
Sbjct: 911 gaactttgggtgctctttctgctgaaggacaaacactatatctccagtgacagtgtcagg 852
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct: 851 cgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattcccttctccac 792
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 791 attcacttcaagcaccttcttctc 768
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 373 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 314
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 313 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 254
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 253 cccttatcaggatgattcttgatagcggc 225
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 1246 gtctcctcgcattcatctatctccatgtc 1218
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 170 gatctcgtagaacttagtgttgtcgctcttcttcg 136
>gb|AY113878.1| Arabidopsis thaliana putative DnaJ-like protein atj3 (At3g44110)
mRNA, complete cds
Length = 1294
Score = 167 bits (84), Expect = 8e-039
Identities = 309/384 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 1035 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 976
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 975 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 916
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 915 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 856
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 855 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 796
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
|||||| | ||| || |||||||| ||||| || || || |||||||| || || |||||
Sbjct: 795 gaactttgggtgctctttctgctgaaggacaaacactatatctccagtgacagtgtcagg 736
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct: 735 cgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattcccttctccac 676
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 675 attcacttcaagcaccttcttctc 652
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 257 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 198
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 197 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 138
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 137 cccttatcaggatgattcttgatagcggc 109
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 1130 gtctcctcgcattcatctatctccatgtc 1102
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 54 gatctcgtagaacttagtgttgtcgctcttcttcg 20
>emb|AX506322.1| Sequence 1017 from Patent WO0216655
Length = 1263
Score = 167 bits (84), Expect = 8e-039
Identities = 309/384 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 1035 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 976
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 975 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 916
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 915 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 856
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 855 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 796
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
|||||| | ||| || |||||||| ||||| || || || |||||||| || || |||||
Sbjct: 795 gaactttgggtgctctttctgctgaaggacaaacactatatctccagtgacagtgtcagg 736
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct: 735 cgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattcccttctccac 676
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 675 attcacttcaagcaccttcttctc 652
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 257 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 198
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 197 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 138
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 137 cccttatcaggatgattcttgatagcggc 109
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 1130 gtctcctcgcattcatctatctccatgtc 1102
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 54 gatctcgtagaacttagtgttgtcgctcttcttcg 20
>ref|NM_114279.2| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3) transcript variant
AT3G44110.1 mRNA, complete cds
Length = 1746
Score = 167 bits (84), Expect = 8e-039
Identities = 309/384 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 1197 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 1138
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 1137 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 1078
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 1077 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 1018
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 1017 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 958
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
|||||| | ||| || |||||||| ||||| || || || |||||||| || || |||||
Sbjct: 957 gaactttgggtgctctttctgctgaaggacaaacactatatctccagtgacagtgtcagg 898
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct: 897 cgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattcccttctccac 838
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 837 attcacttcaagcaccttcttctc 814
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 419 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 360
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 359 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 300
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 299 cccttatcaggatgattcttgatagcggc 271
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 1292 gtctcctcgcattcatctatctccatgtc 1264
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 216 gatctcgtagaacttagtgttgtcgctcttcttcg 182
>gb|U22340.1|ATU22340 Arabidopsis thaliana DnaJ homolog (atj) mRNA, complete cds
Length = 1642
Score = 159 bits (80), Expect = 2e-036
Identities = 308/384 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 1134 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 1075
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 1074 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 1015
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 1014 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 955
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 954 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 895
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
||||| | ||| || |||||||| ||||| || || || |||||||| || || |||||
Sbjct: 894 gaactgtgggtgctctttctgctgaaggacaaacactatatctccagtgacagtgtcagg 835
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct: 834 cgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattcccttctccac 775
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 774 attcacttcaagcaccttcttctc 751
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 356 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 297
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 296 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 237
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 236 cccttatcaggatgattcttgatagcggc 208
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 1229 gtctcctcgcattcatctatctccatgtc 1201
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 153 gatctcgtagaacttagtgttgtcgctcttcttcg 119
>gb|AY045655.1| Arabidopsis thaliana AT3g44110/F26G5_60 mRNA, complete cds
Length = 1692
Score = 159 bits (80), Expect = 2e-036
Identities = 308/384 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 1168 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 1109
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 1108 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 1049
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 1048 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 989
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 988 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 929
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
|||||| | ||| || |||||||| ||||| || || || |||||||| || || |||||
Sbjct: 928 gaactttgggtgctctttctgctgaaggacaaacactatatctccagtgacagtgtcagg 869
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| ||||||||||||||||||| ||
Sbjct: 868 cgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattcccttcttcac 809
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 808 attcacttcaagcaccttcttctc 785
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 390 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 331
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 330 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 271
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 270 cccttatcaggatgattcttgatagcggc 242
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 1263 gtctcctcgcattcatctatctccatgtc 1235
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 187 gatctcgtagaacttagtgttgtcgctcttcttcg 153
>gb|AY088078.1| Arabidopsis thaliana clone 40976 mRNA, complete sequence
Length = 1595
Score = 159 bits (80), Expect = 2e-036
Identities = 308/384 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| || |||||||| ||||||||
Sbjct: 1177 cgagtccgggaactccactgtgaagtggatgtagagcttacctttcatgaatggcctctg 1118
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 1117 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 1058
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 1057 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 998
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 997 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 938
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
|||||| | ||| || |||||||| ||||| || || || |||||||| || || |||||
Sbjct: 937 gaactttgggtgctctttctgctgaaggacaaacactatatctccagtgacagtgtcagg 878
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct: 877 cgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattcccttctccac 818
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 817 attcacttcaagcaccttcttctc 794
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 399 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 340
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 339 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 280
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 279 cccttatcaggatgattcttgatagcggc 251
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 1272 gtctcctcgcattcatctatctccatgtc 1244
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 196 gatctcgtagaacttagtgttgtcgctcttcttcg 162
>gb|AV524587.1|AV524587 AV524587 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD06d09R 5', mRNA
sequence
Length = 554
Score = 155 bits (78), Expect = 3e-035
Identities = 291/362 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 366 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 307
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 306 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 247
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 246 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 187
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 186 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 127
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
|||||| | ||| || |||||||| ||||| || || || |||||||| || || |||||
Sbjct: 126 gaactttgggtgctctttctgctgaaggacaaacactatatctccagtgacagtgtcagg 67
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct: 66 cgcttcatctgcttgtccttcaaatgtgatcttctgactgtgttgcattcccttctccac 7
Query: 995 at 996
||
Sbjct: 6 at 5
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 461 gtctcctcgcattcatctatctccatgtc 433
>gb|CB259915.1|CB259915 13-E9624-013-004-J03-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770J034Q 5-PRIME, mRNA sequence
Length = 574
Score = 143 bits (72), Expect = 1e-031
Identities = 306/384 (79%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 488 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 429
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 428 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 369
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 368 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 309
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 308 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 249
Query: 875 gaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcagg 934
|||||| | ||| || |||||||| ||||| || || || ||||||||||| || |||||
Sbjct: 248 gaactttgggtgctctttctgctgaaggacaaacactatatctccagtaacagtgtcagg 189
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| || || ||||||||||| |||||||||||||||| ||
Sbjct: 188 cgcttcatctgcttgtccttcaaatgtgatcttctgaaaaagttgcattcccttctccac 129
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 128 attcacttcaagcaccttcttctc 105
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 549 cattcatctatctccatgtc 568
||||||||||||||||||||
Sbjct: 574 cattcatctatctccatgtc 555
>ref|NM_180322.1| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3) transcript variant
AT3G44110.2 mRNA, complete cds
Length = 1579
Score = 133 bits (67), Expect = 1e-028
Identities = 274/343 (79%)
Strand = Plus / Minus
Query: 676 ccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggt 735
|||||||||| ||||||||||| |||||||| || |||||| ||||||||||| || |
Sbjct: 1156 ccttcatgaatggcctctggtatatcggcattccttcatcgcttattgccttgtatgaat 1097
Query: 736 caggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtccagatgtg 795
||||||| || || || ||||| | ||||| |||||||| ||| |||| || |
Sbjct: 1096 caggtttcacgacctccccaggattagatttaatgagaagacttctgccatccaagtgag 1037
Query: 796 taagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaaga 855
| |||||||||||||| ||||| | |||||||| ||||| | |||||||| ||||
Sbjct: 1036 tcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaaga 977
Query: 856 gatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgt 915
| ||||| |||||||| |||||||| | ||| || |||||||| ||||| || || || |
Sbjct: 976 ggtcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatat 917
Query: 916 ctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgt 975
||||||| || || |||||||||||||| |||| || || ||||||||||| ||||
Sbjct: 916 ctccagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgt 857
Query: 976 gttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
|||||||||||||||| |||| || ||||| |||||||||||
Sbjct: 856 gttgcattcccttctccacattcacttcaagcaccttcttctc 814
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 419 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 360
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 359 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 300
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 299 cccttatcaggatgattcttgatagcggc 271
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 216 gatctcgtagaacttagtgttgtcgctcttcttcg 182
>gb|BU636099.1|BU636099 045E06 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 735
Score = 127 bits (64), Expect = 7e-027
Identities = 271/340 (79%)
Strand = Plus / Minus
Query: 679 tcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcag 738
||||||| ||||||||||| |||||||| || |||||| ||||||||||| || ||||
Sbjct: 656 tcatgaatggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcag 597
Query: 739 gtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaa 798
|||| || || || ||||| | ||||| |||||||| ||| |||| || || |
Sbjct: 596 gtttcacgacctccccaggattagatttaatgagaagacttctgccatccaagtgagtca 537
Query: 799 gaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagat 858
||||||||||||| ||||| | |||||||| ||||| | |||||||| ||||| |
Sbjct: 536 gaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggt 477
Query: 859 cttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctc 918
|||| |||||||| |||||||| | ||| || |||||||| ||||| || || || ||||
Sbjct: 476 cttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctc 417
Query: 919 cagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgtt 978
|||| || || |||||||||||||| |||| || || ||||||||||| |||||||
Sbjct: 416 cagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgtt 357
Query: 979 gcattcccttctcaacatgaacctcaagaaccttcttctc 1018
||||||||||||| |||| || ||||| |||||||||||
Sbjct: 356 gcattcccttctccacattcacttcaagcaccttcttctc 317
>gb|AV824391.1|AV824391 AV824391 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-C20 5', mRNA
sequence
Length = 476
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 386 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 327
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 326 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 267
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 266 cccttatcaggatggtttttgatagcggc 238
>gb|AU239248.1|AU239248 AU239248 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-64-P10 5',
mRNA sequence
Length = 650
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 332 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 273
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 272 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 213
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 212 cccttatcaggatggtttttgatagcggc 184
>gb|AV550422.1|AV550422 AV550422 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ112c07R 5', mRNA sequence
Length = 464
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 305 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 246
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 245 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 186
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 185 cccttatcaggatggtttttgatagcggc 157
>gb|BP820203.1|BP820203 BP820203 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-53-M10 5',
mRNA sequence
Length = 395
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 331 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 272
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 271 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 212
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 211 cccttatcaggatggtttttgatagcggc 183
>gb|BP820336.1|BP820336 BP820336 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-54-D12 5',
mRNA sequence
Length = 387
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 331 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 272
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 271 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 212
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 211 cccttatcaggatggtttttgatagcggc 183
>gb|BP847929.1|BP847929 BP847929 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-K01 5',
mRNA sequence
Length = 383
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 312 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 253
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 252 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 193
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 192 cccttatcaggatggtttttgatagcggc 164
>gb|BP853093.1|BP853093 BP853093 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-22-B19 5',
mRNA sequence
Length = 381
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 337 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 278
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 277 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 218
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 217 cccttatcaggatggtttttgatagcggc 189
>gb|BP855038.1|BP855038 BP855038 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-25-E20 5',
mRNA sequence
Length = 369
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 337 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 278
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 277 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 218
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 217 cccttatcaggatggtttttgatagcggc 189
>gb|BP855559.1|BP855559 BP855559 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-27-A16 5',
mRNA sequence
Length = 410
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 386 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 327
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 326 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 267
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 266 cccttatcaggatggtttttgatagcggc 238
>gb|BP859641.1|BP859641 BP859641 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-41-F20 5',
mRNA sequence
Length = 391
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 385 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 326
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 325 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 266
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 265 cccttatcaggatggtttttgatagcggc 237
>gb|BP865537.1|BP865537 BP865537 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-74-I20 5',
mRNA sequence
Length = 376
Score = 121 bits (61), Expect = 4e-025
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 337 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 278
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 277 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 218
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 217 cccttatcaggatggtttttgatagcggc 189
>gb|AV821835.1|AV821835 AV821835 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-B06 5', mRNA
sequence
Length = 388
Score = 115 bits (58), Expect = 3e-023
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 337 ccaccacccattccttcctngagtgcatcttccccatattgatcatagatctcacgcttc 278
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 277 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 218
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 217 cccttatcaggatggtttttgatagcggc 189
>gb|BP832844.1|BP832844 BP832844 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-93-P11 5',
mRNA sequence
Length = 396
Score = 115 bits (58), Expect = 3e-023
Identities = 128/150 (85%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 331 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 272
Query: 1476 tctggatcactcaaaacctcat-aggcttgtgcgagctccttgaacttctcggggtcacc 1534
|| |||||||| ||||| |||| |||| ||||| | ||| || ||||| ||||| |||||
Sbjct: 271 tcaggatcacttaaaacttcataaggcctgtgctaactctttaaacttttcgggatcacc 212
Query: 1535 gcccttgtcggggtggttcttgatagcggc 1564
||||| || || ||||| |||||||||||
Sbjct: 211 acccttatcaggatggtttttgatagcggc 182
>gb|CB258912.1|CB258912 09-E011082-014-003-B03-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771B033Q 5-PRIME, mRNA sequence
Length = 513
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 330 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 271
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 270 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 211
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 210 cccttatcaggatgattcttgatagcggc 182
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 127 gatctcgtagaacttagtgttgtcgctcttcttcg 93
>gb|AV526975.1|AV526975 AV526975 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZ25e12R 5', mRNA
sequence
Length = 447
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 368 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 309
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 308 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 249
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 248 cccttatcaggatgattcttgatagcggc 220
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 165 gatctcgtagaacttagtgttgtcgctcttcttcg 131
>gb|AV524937.2|AV524937 AV524937 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APD13c02R 5', mRNA
sequence
Length = 569
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 349 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 290
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 289 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 230
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 229 cccttatcaggatgattcttgatagcggc 201
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 146 gatctcgtagaacttagtgttgtcgctcttcttcg 112
>gb|AV540757.1|AV540757 AV540757 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ154f02F 3', mRNA sequence
Length = 607
Score = 113 bits (57), Expect = 1e-022
Identities = 201/249 (80%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 357 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 416
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| |||||| || |||||||| || || ||
Sbjct: 417 ttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttgacgacctc 476
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| || | ||||||||||||||||| || ||||||| ||| || | ||||| |||||
Sbjct: 477 tccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaa 536
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| | || ||||| ||||| | ||||||||| |||||||| |||||||||||
Sbjct: 537 gccacacaaggcctcggttagagagatggtgtgctccacaaagagatcctcaccctttct 596
Query: 872 tttgaactt 880
|||||||||
Sbjct: 597 tttgaactt 605
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 245 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 290
>gb|CK119390.1|CK119390 201l01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L01201
5-PRIME, mRNA sequence
Length = 761
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 345 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 286
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 285 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 226
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 225 cccttatcaggatgattcttgatagcggc 197
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 142 gatctcgtagaacttagtgttgtcgctcttcttcg 108
>gb|BP561192.1|BP561192 BP561192 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-15-L15 5', mRNA
sequence
Length = 662
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 455 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 396
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 395 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 336
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 335 cccttatcaggatgattcttgatagcggc 307
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 252 gatctcgtagaacttagtgttgtcgctcttcttcg 218
>gb|BP561520.2|BP561520 BP561520 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-08-D21 5', mRNA
sequence
Length = 539
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 392 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 333
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 332 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 273
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 272 cccttatcaggatgattcttgatagcggc 244
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 189 gatctcgtagaacttagtgttgtcgctcttcttcg 155
>gb|BP812305.1|BP812305 BP812305 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-03-A01 5',
mRNA sequence
Length = 394
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 353 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 294
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 293 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 234
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 233 cccttatcaggatgattcttgatagcggc 205
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 150 gatctcgtagaacttagtgttgtcgctcttcttcg 116
>gb|BP819333.1|BP819333 BP819333 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-50-P03 5',
mRNA sequence
Length = 406
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 355 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 296
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 295 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 236
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 235 cccttatcaggatgattcttgatagcggc 207
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 152 gatctcgtagaacttagtgttgtcgctcttcttcg 118
>gb|BP820936.1|BP820936 BP820936 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-56-D17 5',
mRNA sequence
Length = 392
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 387 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 328
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 327 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 268
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 267 cccttatcaggatgattcttgatagcggc 239
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 184 gatctcgtagaacttagtgttgtcgctcttcttcg 150
>gb|BP821075.1|BP821075 BP821075 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-56-L10 5',
mRNA sequence
Length = 394
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 388 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 329
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 328 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 269
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 268 cccttatcaggatgattcttgatagcggc 240
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 185 gatctcgtagaacttagtgttgtcgctcttcttcg 151
>gb|BP825757.1|BP825757 BP825757 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-69-K06 5',
mRNA sequence
Length = 377
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 353 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 294
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 293 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 234
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 233 cccttatcaggatgattcttgatagcggc 205
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 150 gatctcgtagaacttagtgttgtcgctcttcttcg 116
>gb|BP831553.1|BP831553 BP831553 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-89-G03 5',
mRNA sequence
Length = 404
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 388 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 329
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 328 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 269
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 268 cccttatcaggatgattcttgatagcggc 240
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 185 gatctcgtagaacttagtgttgtcgctcttcttcg 151
>gb|BP835283.1|BP835283 BP835283 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-12-O12 5',
mRNA sequence
Length = 401
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 354 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 295
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 294 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 235
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 234 cccttatcaggatgattcttgatagcggc 206
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 152 gatctcgtagaacttagtgttgtcgctcttcttcg 118
>gb|BP851282.1|BP851282 BP851282 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-15-N24 5',
mRNA sequence
Length = 401
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 359 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 300
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 299 tccgggtcactaagcacttcataagcttgtgctaactcctttaacttctcgggatctcca 240
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 239 cccttatcaggatgattcttgatagcggc 211
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 156 gatctcgtagaacttagtgttgtcgctcttcttcg 122
>gb|BP865904.1|BP865904 BP865904 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-75-N20 5',
mRNA sequence
Length = 378
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 359 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 300
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 299 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 240
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 239 cccttatcaggatgattcttgatagcggc 211
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 156 gatctcgtagaacttagtgttgtcgctcttcttcg 122
>gb|BP867654.1|BP867654 BP867654 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-81-M07 5',
mRNA sequence
Length = 413
Score = 113 bits (57), Expect = 1e-022
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 383 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 324
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 323 tccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcca 264
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 263 cccttatcaggatgattcttgatagcggc 235
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 180 gatctcgtagaacttagtgttgtcgctcttcttcg 146
>gb|BE527925.1|BE527925 M70M03STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600036915R1 5', mRNA sequence
Length = 282
Score = 111 bits (56), Expect = 4e-022
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| ||||||| |||
Sbjct: 209 ccaccacccattccttccttgagtgcatcttccccatattgatcatagntctcacgcttc 150
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 149 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 90
Query: 1536 cccttgtcggggtggttcttgatagc 1561
||||| || || ||||| ||||||||
Sbjct: 89 cccttatcaggatggttnttgatagc 64
>gb|BP837230.1|BP837230 BP837230 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-19-L13 5',
mRNA sequence
Length = 386
Score = 111 bits (56), Expect = 4e-022
Identities = 125/148 (84%)
Strand = Plus / Minus
Query: 1417 caccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttct 1476
||||||||||||||||||| || ||||| || |||||||| |||||||||||||| ||||
Sbjct: 386 caccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttct 327
Query: 1477 ctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgc 1536
| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || || |
Sbjct: 326 ccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctccac 267
Query: 1537 ccttgtcggggtggttcttgatagcggc 1564
|||| || || || ||||||||||||||
Sbjct: 266 ccttatcaggatgattcttgatagcggc 239
>gb|T76230.1|T76230 11008 Lambda-PRL2 Arabidopsis thaliana cDNA clone 147N11T7, mRNA
sequence
Length = 418
Score = 107 bits (54), Expect = 6e-021
Identities = 183/225 (81%), Gaps = 1/225 (0%)
Strand = Plus / Minus
Query: 795 gtaagaacaaa-ttggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaa 853
||||||||||| |||||| ||||| | |||||||| ||||| | |||||||| ||
Sbjct: 325 gtaagaacaaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaa 266
Query: 854 gagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaat 913
||| ||||| |||||||| |||||||| | ||| || |||||||| ||||| || || ||
Sbjct: 265 gaggtcttcnccctttctcttgaactttgggtgctctttctgctgaaggacaaacactat 206
Query: 914 gtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggct 973
|||||||| || || |||||||||||||| |||| || || ||||||||||| ||
Sbjct: 205 atctccagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgact 146
Query: 974 gtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
|||||||||||||||||| |||| || ||||| |||||||||||
Sbjct: 145 gtgttgcattcccttctccacattcacttcaagcaccttcttctc 101
>gb|BP817250.1|BP817250 BP817250 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-44-G10 5',
mRNA sequence
Length = 406
Score = 107 bits (54), Expect = 6e-021
Identities = 127/150 (84%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagg-gcatcttcaccatactgatcataaatctcacgttt 1474
|||||||||||||||||||| ||| ||||| || |||||||| |||||||||||||| ||
Sbjct: 388 ccaccacccattccttccttgaggtgcatcctctccatactggtcataaatctcacgctt 329
Query: 1475 ctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcacc 1534
||| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 328 ctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcc 269
Query: 1535 gcccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 268 acccttatcaggatgattcttgatagcggc 239
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 184 gatctcgtagaacttagtgttgtcgctcttcttcg 150
>gb|BP851122.1|BP851122 BP851122 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-15-F14 5',
mRNA sequence
Length = 409
Score = 105 bits (53), Expect = 3e-020
Identities = 126/149 (84%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 394 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 335
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 334 tccgggtcactaagcacttcataagcttgtgctaactcctt-aacttctcgggatctcca 276
Query: 1536 cccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 275 cccttatcaggatgattcttgatagcggc 247
Score = 40.1 bits (20), Expect = 1.2
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1630 acttggtgttgtcgctcttcttcg 1653
|||| |||||||||||||||||||
Sbjct: 183 acttagtgttgtcgctcttcttcg 160
>gb|R29960.1|R29960 12565 Lambda-PRL2 Arabidopsis thaliana cDNA clone 163B17T7, mRNA
sequence
Length = 513
Score = 103 bits (52), Expect = 1e-019
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||| ||||| || |||||||| ||||| ||| |||| |||||||| |||
Sbjct: 372 ccaccacccattccntccttgagtgcatcttccccatattgancatagatctcacgcttc 313
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| |||||||| ||||| ||||| || ||||| | ||| || ||||| ||||| |||||
Sbjct: 312 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 253
Query: 1536 cccttgtcggggtggttcttgatagc 1561
||||| || || ||||| ||||||||
Sbjct: 252 cccttatcaggatggtttttgatagc 227
>gb|BE526451.1|BE526451 M65D04STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600035110R1 5', mRNA sequence
Length = 261
Score = 101 bits (51), Expect = 4e-019
Identities = 162/199 (81%)
Strand = Plus / Minus
Query: 798 agaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagaga 857
|||||||||||||| ||||| | |||||||| ||||| | |||||||| |||||
Sbjct: 213 agaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagagg 154
Query: 858 tcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtct 917
||||| |||||||| |||||||| | ||| || |||||||| ||||| || || || |||
Sbjct: 153 tcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatct 94
Query: 918 ccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgt 977
||||| || || |||||||||||||| |||| || || ||||||||||| ||||||
Sbjct: 93 ccagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgt 34
Query: 978 tgcattcccttctcaacat 996
|||||||||||||| ||||
Sbjct: 33 tgcattcccttctccacat 15
>gb|BZ769122.1|BZ769122 SALK_141625.50.70.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_141625.50.70.x,
DNA sequence
Length = 304
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 22 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 81
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 82 gtatatcggcattccttcatcgcttattgccttg 115
>emb|AJ601167.1| Arabidopsis thaliana T-DNA flanking sequence, right border, clone
521H10, genomic survey sequence
Length = 740
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 325 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 266
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 265 gtatatcggcattccttcatcgcttattgccttg 232
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 420 gtctcctcgcattcatctatctccatgtc 392
>gb|AV785278.1|AV785278 AV785278 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-13-M23 3',
mRNA sequence
Length = 697
Score = 99.6 bits (50), Expect = 2e-018
Identities = 197/246 (80%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 436 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 495
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 496 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 555
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 556 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 615
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 616 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 675
Query: 875 gaactt 880
||||||
Sbjct: 676 gaactt 681
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 341 gtctcctcgcattcatctatctccatgtc 369
>gb|AV785374.1|AV785374 AV785374 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-15-L15 3',
mRNA sequence
Length = 695
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 492 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 551
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 552 gtatatcggcattccttcatcgcttattgccttg 585
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 397 gtctcctcgcattcatctatctccatgtc 425
>gb|AV531399.1|AV531399 AV531399 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB021b03F 3', mRNA sequence
Length = 573
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 395 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 454
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 455 gtatatcggcattccttcatcgcttattgccttg 488
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 300 gtctcctcgcattcatctatctccatgtc 328
>gb|AV542282.1|AV542282 AV542282 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ181e08F 3', mRNA sequence
Length = 628
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 418 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 477
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 478 gtatatcggcattccttcatcgcttattgccttg 511
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|AV562719.1|AV562719 AV562719 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ174h06F 3', mRNA sequence
Length = 581
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 418 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 477
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 478 gtatatcggcattccttcatcgcttattgccttg 511
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|U64912.1|ATU64912 Arabidopsis thaliana farnesylated protein ATFP9 mRNA, partial cds
Length = 270
Score = 99.6 bits (50), Expect = 2e-018
Identities = 197/246 (80%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 252 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 193
Query: 695 gtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||| |||||||| || |||||| ||||||||||| || |||||||| || || || ||
Sbjct: 192 gtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacgacctcccc 133
Query: 755 agggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaaccc 814
||| | ||||| |||||||| ||| |||| || || |||||||||||||| ||
Sbjct: 132 aggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaagcc 73
Query: 815 acatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttctttt 874
||| | |||||||| ||||| | |||||||| ||||| ||||| |||||||| ||
Sbjct: 72 acacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttctctt 13
Query: 875 gaactt 880
||||||
Sbjct: 12 gaactt 7
>gb|AF032883.1|AF032883 Arabidopsis thaliana DnaJ homolog AtJ3 (ATJ3) gene, complete cds
Length = 2403
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 1910 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 1851
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 1850 gtatatcggcattccttcatcgcttattgccttg 1817
Score = 83.8 bits (42), Expect = 9e-014
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 711 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 652
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaact 1521
|| || ||||| | || ||||| |||||||| | |||||| ||||
Sbjct: 651 tccgggtcactaagcacttcataagcttgtgctaactccttaaact 606
Score = 69.9 bits (35), Expect = 1e-009
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
||||||||||| |||||||||||||||||||| |||| || ||||| |||||||||||
Sbjct: 1394 gtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttctc 1336
Score = 60.0 bits (30), Expect = 1e-006
Identities = 111/138 (80%)
Strand = Plus / Minus
Query: 798 agaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagaga 857
|||||||||||||| ||||| | |||||||| ||||| | |||||||| |||||
Sbjct: 1654 agaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagagg 1595
Query: 858 tcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtct 917
||||| |||||||| |||||||| | ||| || |||||||| ||||| || || || |||
Sbjct: 1594 tcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatct 1535
Query: 918 ccagtaacggtatcaggc 935
||||| || || ||||||
Sbjct: 1534 ccagtgacagtgtcaggc 1517
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 2005 gtctcctcgcattcatctatctccatgtc 1977
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 247 gatctcgtagaacttagtgttgtcgctcttcttcg 213
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 15833383 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 15833442
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 15833443 gtatatcggcattccttcatcgcttattgccttg 15833476
Score = 83.8 bits (42), Expect = 9e-014
Identities = 90/106 (84%)
Strand = Plus / Plus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 15834582 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 15834641
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaact 1521
|| || ||||| | || ||||| |||||||| | |||||| ||||
Sbjct: 15834642 tccgggtcactaagcacttcataagcttgtgctaactccttaaact 15834687
Score = 69.9 bits (35), Expect = 1e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
||||||||||| |||||||||||||||||||| |||| || ||||| |||||||||||
Sbjct: 15833899 gtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttctc 15833957
Score = 60.0 bits (30), Expect = 1e-006
Identities = 111/138 (80%)
Strand = Plus / Plus
Query: 798 agaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagaga 857
|||||||||||||| ||||| | |||||||| ||||| | |||||||| |||||
Sbjct: 15833639 agaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagagg 15833698
Query: 858 tcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtct 917
||||| |||||||| |||||||| | ||| || |||||||| ||||| || || || |||
Sbjct: 15833699 tcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatct 15833758
Query: 918 ccagtaacggtatcaggc 935
||||| || || ||||||
Sbjct: 15833759 ccagtgacagtgtcaggc 15833776
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 15833288 gtctcctcgcattcatctatctccatgtc 15833316
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 15835046 gatctcgtagaacttagtgttgtcgctcttcttcg 15835080
>emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome 3, BAC clone F26G5
Length = 102873
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 50644 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 50703
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 50704 gtatatcggcattccttcatcgcttattgccttg 50737
Score = 83.8 bits (42), Expect = 9e-014
Identities = 90/106 (84%)
Strand = Plus / Plus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 51843 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 51902
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaact 1521
|| || ||||| | || ||||| |||||||| | |||||| ||||
Sbjct: 51903 tccgggtcactaagcacttcataagcttgtgctaactccttaaact 51948
Score = 69.9 bits (35), Expect = 1e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
||||||||||| |||||||||||||||||||| |||| || ||||| |||||||||||
Sbjct: 51160 gtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttctc 51218
Score = 60.0 bits (30), Expect = 1e-006
Identities = 111/138 (80%)
Strand = Plus / Plus
Query: 798 agaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagaga 857
|||||||||||||| ||||| | |||||||| ||||| | |||||||| |||||
Sbjct: 50900 agaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagagg 50959
Query: 858 tcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtct 917
||||| |||||||| |||||||| | ||| || |||||||| ||||| || || || |||
Sbjct: 50960 tcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatct 51019
Query: 918 ccagtaacggtatcaggc 935
||||| || || ||||||
Sbjct: 51020 ccagtgacagtgtcaggc 51037
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 50549 gtctcctcgcattcatctatctccatgtc 50577
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 52307 gatctcgtagaacttagtgttgtcgctcttcttcg 52341
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 99.6 bits (50), Expect = 2e-018
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 15880330 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 15880389
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || |||||| |||||||||||
Sbjct: 15880390 gtatatcggcattccttcatcgcttattgccttg 15880423
Score = 83.8 bits (42), Expect = 9e-014
Identities = 90/106 (84%)
Strand = Plus / Plus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 15881529 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 15881588
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaact 1521
|| || ||||| | || ||||| |||||||| | |||||| ||||
Sbjct: 15881589 tccgggtcactaagcacttcataagcttgtgctaactccttaaact 15881634
Score = 69.9 bits (35), Expect = 1e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
||||||||||| |||||||||||||||||||| |||| || ||||| |||||||||||
Sbjct: 15880846 gtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttctc 15880904
Score = 60.0 bits (30), Expect = 1e-006
Identities = 111/138 (80%)
Strand = Plus / Plus
Query: 798 agaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagaga 857
|||||||||||||| ||||| | |||||||| ||||| | |||||||| |||||
Sbjct: 15880586 agaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagagg 15880645
Query: 858 tcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtct 917
||||| |||||||| |||||||| | ||| || |||||||| ||||| || || || |||
Sbjct: 15880646 tcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatct 15880705
Query: 918 ccagtaacggtatcaggc 935
||||| || || ||||||
Sbjct: 15880706 ccagtgacagtgtcaggc 15880723
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 15880235 gtctcctcgcattcatctatctccatgtc 15880263
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 15881993 gatctcgtagaacttagtgttgtcgctcttcttcg 15882027
>gb|AV538224.1|AV538224 AV538224 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ112c07F 3', mRNA sequence
Length = 612
Score = 95.6 bits (48), Expect = 2e-017
Identities = 174/216 (80%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 394 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 453
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| ||||||||| |||||||| || || ||
Sbjct: 454 ttggtatattggcattccctcatcacttatcgccttgaatgaatcaggtttgacgacctc 513
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| || | ||||||||||||||||| || ||||||| ||| || | ||||| |||||
Sbjct: 514 tccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaa 573
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctc 847
||||| | || ||||| ||||| | |||||||||
Sbjct: 574 gccacacaaggcctcggttagagagatggtgtgctc 609
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 282 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 327
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 95.6 bits (48), Expect = 2e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 6995452 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 6995511
Query: 1476 tctggatcactcaaaacctcataggcttgtgc 1507
|| |||||||| ||||| ||||| || |||||
Sbjct: 6995512 tcaggatcacttaaaacttcataagcctgtgc 6995543
Score = 83.8 bits (42), Expect = 9e-014
Identities = 141/174 (81%)
Strand = Plus / Plus
Query: 762 gatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacatagt 821
||||||||||||||||| || ||||||| ||| || | ||||| ||||| ||||| |
Sbjct: 6994614 gatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaagccacacaag 6994673
Query: 822 gcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaacttg 881
|| ||||| ||||| | ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 6994674 gcctcggttagagagatggtgtgctccacaaagagatcctcaccctttcttttgaacttt 6994733
Query: 882 gagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcaggc 935
| ||| ||||||||||| | ||| || || || ||||| || || |||||||||
Sbjct: 6994734 gggtgctccttctgctgaatgacaaacactatatctccggtgacagtatcaggc 6994787
Score = 73.8 bits (37), Expect = 9e-011
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 6994388 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 6994447
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| || ||||| |||||||| |||| ||||||
Sbjct: 6994448 ttggtatattggcattccctcatcacttatcgccttg 6994484
Score = 63.9 bits (32), Expect = 9e-008
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| ||| ||| ||||||||||| ||||||||||||||||||| ||
Sbjct: 6994871 cgcttcatcggcttgtccactgaatgtgatcttctgattgtgttgcattcccttctccac 6994930
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 6994931 atttacttcaagcaccttcttctc 6994954
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 6994276 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 6994321
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 22888068 cctgctgcttccaccacctc 22888087
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1253 cttctttgagattccattg 1271
|||||||||||||||||||
Sbjct: 8395341 cttctttgagattccattg 8395323
>emb|AL589883.1|ATT6G21 Arabidopsis thaliana DNA chromosome 5, BAC clone T6G21 (ESSA project)
Length = 149788
Score = 95.6 bits (48), Expect = 2e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 72799 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 72858
Query: 1476 tctggatcactcaaaacctcataggcttgtgc 1507
|| |||||||| ||||| ||||| || |||||
Sbjct: 72859 tcaggatcacttaaaacttcataagcctgtgc 72890
Score = 83.8 bits (42), Expect = 9e-014
Identities = 141/174 (81%)
Strand = Plus / Plus
Query: 762 gatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacatagt 821
||||||||||||||||| || ||||||| ||| || | ||||| ||||| ||||| |
Sbjct: 71961 gatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaagccacacaag 72020
Query: 822 gcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaacttg 881
|| ||||| ||||| | ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 72021 gcctcggttagagagatggtgtgctccacaaagagatcctcaccctttcttttgaacttt 72080
Query: 882 gagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcaggc 935
| ||| ||||||||||| | ||| || || || ||||| || || |||||||||
Sbjct: 72081 gggtgctccttctgctgaatgacaaacactatatctccggtgacagtatcaggc 72134
Score = 73.8 bits (37), Expect = 9e-011
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 71735 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 71794
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| || ||||| |||||||| |||| ||||||
Sbjct: 71795 ttggtatattggcattccctcatcacttatcgccttg 71831
Score = 63.9 bits (32), Expect = 9e-008
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| ||| ||| ||||||||||| ||||||||||||||||||| ||
Sbjct: 72218 cgcttcatcggcttgtccactgaatgtgatcttctgattgtgttgcattcccttctccac 72277
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 72278 atttacttcaagcaccttcttctc 72301
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 71623 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 71668
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 95.6 bits (48), Expect = 2e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||||||| ||||| |||||||| |||||||| |||
Sbjct: 7305084 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 7305143
Query: 1476 tctggatcactcaaaacctcataggcttgtgc 1507
|| |||||||| ||||| ||||| || |||||
Sbjct: 7305144 tcaggatcacttaaaacttcataagcctgtgc 7305175
Score = 83.8 bits (42), Expect = 9e-014
Identities = 141/174 (81%)
Strand = Plus / Plus
Query: 762 gatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacatagt 821
||||||||||||||||| || ||||||| ||| || | ||||| ||||| ||||| |
Sbjct: 7304246 gatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaagccacacaag 7304305
Query: 822 gcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaacttg 881
|| ||||| ||||| | ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 7304306 gcctcggttagagagatggtgtgctccacaaagagatcctcaccctttcttttgaacttt 7304365
Query: 882 gagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcaggc 935
| ||| ||||||||||| | ||| || || || ||||| || || |||||||||
Sbjct: 7304366 gggtgctccttctgctgaatgacaaacactatatctccggtgacagtatcaggc 7304419
Score = 73.8 bits (37), Expect = 9e-011
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 7304020 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 7304079
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| || ||||| |||||||| |||| ||||||
Sbjct: 7304080 ttggtatattggcattccctcatcacttatcgccttg 7304116
Score = 63.9 bits (32), Expect = 9e-008
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 935 cgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaac 994
||||||||| |||| ||| ||| ||||||||||| ||||||||||||||||||| ||
Sbjct: 7304503 cgcttcatcggcttgtccactgaatgtgatcttctgattgtgttgcattcccttctccac 7304562
Query: 995 atgaacctcaagaaccttcttctc 1018
|| || ||||| |||||||||||
Sbjct: 7304563 atttacttcaagcaccttcttctc 7304586
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 7303908 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 7303953
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 25869981 cctgctgcttccaccacctc 25870000
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1253 cttctttgagattccattg 1271
|||||||||||||||||||
Sbjct: 8904971 cttctttgagattccattg 8904953
>gb|BP816535.1|BP816535 BP816535 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-42-D19 5',
mRNA sequence
Length = 403
Score = 93.7 bits (47), Expect = 1e-016
Identities = 127/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagg-gcatcttcaccatactgatcataaatctcacgttt 1474
|||||||||||||||||||| ||| |||||||| ||||| |||||||| |||||||| ||
Sbjct: 333 ccaccacccattccttccttgaggtgcatcttccccatattgatcatagatctcacgctt 274
Query: 1475 ctctggatcactcaaaacctcat-aggcttgtgcgagctccttgaacttctcggggtcac 1533
||| |||||||| ||||| |||| || | ||||| | ||| || ||||| ||||| ||||
Sbjct: 273 ctcaggatcacttaaaacttcataagccctgtgctaactctttaaacttttcgggatcac 214
Query: 1534 cgcccttgtcggggtggttcttgatagcggc 1564
| ||| | || || ||||| |||||||||||
Sbjct: 213 cacccctatcaggatggtttttgatagcggc 183
>gb|CA781754.1|CA781754 048C12AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 695
Score = 91.7 bits (46), Expect = 4e-016
Identities = 125/150 (83%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || ||||| || |||||||| |||||||||||||| |||
Sbjct: 316 ccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcacgcttc 257
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagct-ccttgaacttctcggggtcacc 1534
|| || ||||| | || ||||| |||||||| | || |||| ||||| ||||| || ||
Sbjct: 256 tccgggtcactaagcacttcataagcttgtgctaactcccttaaacttttcgggatctcc 197
Query: 1535 gcccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 196 acccttatcaggatgattcttgatagcggc 167
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 112 gatctcgtagaacttagtgttgtcgctcttcttcg 78
>gb|AV518673.2|AV518673 AV518673 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD35e10F 3', mRNA
sequence
Length = 570
Score = 91.7 bits (46), Expect = 4e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 418 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 477
Query: 695 gtaaatcggcatcccctcatcgtttattgccttg 728
||| |||||||| || | |||| |||||||||||
Sbjct: 478 gtatatcggcattcctttatcgcttattgccttg 511
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|BP846461.1|BP846461 BP846461 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-97-A12 5',
mRNA sequence
Length = 414
Score = 91.7 bits (46), Expect = 4e-016
Identities = 125/150 (83%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccata-ctgatcataaatctcacgttt 1474
||||| |||||||||||||| || ||||| || ||||| ||| |||||||||||||| ||
Sbjct: 390 ccaccgcccattccttccttgagtgcatcctctccatagctggtcataaatctcacgctt 331
Query: 1475 ctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcacc 1534
||| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || ||
Sbjct: 330 ctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctcc 271
Query: 1535 gcccttgtcggggtggttcttgatagcggc 1564
||||| || || || ||||||||||||||
Sbjct: 270 acccttatcaggatgattcttgatagcggc 241
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 185 gatctcgtagaacttagtgttgtcgctcttcttcg 151
>gb|H76192.1|H76192 17897 Lambda-PRL2 Arabidopsis thaliana cDNA clone 196N24T7, mRNA
sequence
Length = 509
Score = 87.7 bits (44), Expect = 6e-015
Identities = 131/160 (81%)
Strand = Plus / Minus
Query: 859 cttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctc 918
|||| ||||| || |||||||| | ||| || |||||||| ||||| || || || ||||
Sbjct: 271 cttctcccttcctcttgaactttgggtgctctttctgctgaaggacaaacactatatctc 212
Query: 919 cagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgtt 978
|||| || || |||||||||||||| |||| || || ||||||||||| |||||||
Sbjct: 211 cagtgacagtgtcaggcgcttcatctgcttgtccttcaaatgtgatcttctgactgtgtt 152
Query: 979 gcattcccttctcaacatgaacctcaagaaccttcttctc 1018
||||||||||||| |||| || ||||| |||||||||||
Sbjct: 151 gcattcccttctccacattcacttcaagcaccttcttctc 112
>gb|BP806707.1|BP806707 BP806707 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-10-N22 5',
mRNA sequence
Length = 398
Score = 85.7 bits (43), Expect = 2e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||||| || |||| ||| ||||| |||||||| |||||||| |||
Sbjct: 330 ccaccacccattccttccttgagtgcatgttccccatattgatcatagatctcacgcttc 271
Query: 1476 tctggatcactcaaaacctcata 1498
|| |||||||| ||||| |||||
Sbjct: 270 tcaggatcacttaaaacttcata 248
>gb|BP813111.1|BP813111 BP813111 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-05-G20 5',
mRNA sequence
Length = 409
Score = 85.7 bits (43), Expect = 2e-014
Identities = 126/151 (83%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccata-ctga-tcataaatctcacgtt 1473
|||||||||||||||||||| || ||||| || ||||| ||| |||||||||||||| |
Sbjct: 388 ccaccacccattccttccttgagtgcatcctctccatagctgggtcataaatctcacgct 329
Query: 1474 tctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcac 1533
|||| || ||||| | || ||||| |||||||| | |||||| ||||||||||| || |
Sbjct: 328 tctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggatctc 269
Query: 1534 cgcccttgtcggggtggttcttgatagcggc 1564
| ||||| || || || ||||||||||||||
Sbjct: 268 cacccttatcaggatgattcttgatagcggc 238
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 183 gatctcgtagaacttagtgttgtcgctcttcttcg 149
>gb|B22771.1|B22771 F22A1TR IGF Arabidopsis thaliana genomic clone F22A1, DNA sequence
Length = 423
Score = 83.8 bits (42), Expect = 9e-014
Identities = 141/174 (81%)
Strand = Plus / Plus
Query: 762 gatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacatagt 821
||||||||||||||||| || ||||||| ||| || | ||||| ||||| ||||| |
Sbjct: 210 gatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaagccacacaag 269
Query: 822 gcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaacttg 881
|| ||||| ||||| | ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 270 gcctcggttagagagatggtgtgctccacaaagagatcctcaccctttcttttgaacttt 329
Query: 882 gagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcaggc 935
| ||| ||||||||||| | ||| || || || ||||| || || |||||||||
Sbjct: 330 gggtgctccttctgctgaatgacaaacactatatctccggtgacagtatcaggc 383
Score = 67.9 bits (34), Expect = 6e-009
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 651 accgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccc 710
|||||||| |||||||| ||||| ||||||||||| ||||| ||||| || ||||| |||
Sbjct: 3 accgtgaagtgaatgtatagcttacccttcatgaacggcctttggtatattggcattccc 62
Query: 711 tcatcgtttattgccttg 728
||||| |||| ||||||
Sbjct: 63 tcatcacttatcgccttg 80
>gb|AV782390.1|AV782390 AV782390 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-17-B06 3',
mRNA sequence
Length = 589
Score = 83.8 bits (42), Expect = 9e-014
Identities = 129/158 (81%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 393 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 452
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| |||||| || |||||||| || || ||
Sbjct: 453 ttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttgacgacctc 512
Query: 752 accagggtctgatttgatgagaagctgcctgttgtcca 789
|| || | ||||||||||||||||| || |||||||
Sbjct: 513 tccgggcttggatttgatgagaagctgtcttttgtcca 550
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 281 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 326
>gb|AV542350.1|AV542350 AV542350 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ182f12F 3', mRNA sequence
Length = 596
Score = 83.8 bits (42), Expect = 9e-014
Identities = 129/158 (81%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 394 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 453
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
||||| || ||||| |||||||| |||| |||||| || |||||||| || || ||
Sbjct: 454 ttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttgacgacctc 513
Query: 752 accagggtctgatttgatgagaagctgcctgttgtcca 789
|| || | ||||||||||||||||| || |||||||
Sbjct: 514 tccgggcttggatttgatgagaagctgtcttttgtcca 551
Score = 44.1 bits (22), Expect = 0.080
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||| ||| ||||| || ||||| |||||
Sbjct: 282 tgttcacatcatgcagagtcgcctcttcgcagtcgtctatttccat 327
>gb|H76988.1|H76988 17419 Lambda-PRL2 Arabidopsis thaliana cDNA clone 201A17T7, mRNA
sequence
Length = 332
Score = 81.8 bits (41), Expect = 4e-013
Identities = 150/188 (79%)
Strand = Plus / Minus
Query: 804 aattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttca 863
|||||||| ||||| | |||||||| ||||| | |||||||| ||||| |||||
Sbjct: 188 aattggaanccacanaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttct 129
Query: 864 ccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagta 923
|||||||| |||||||| | ||| || |||||||| ||||| || || || ||||||||
Sbjct: 128 ccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtg 69
Query: 924 acggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcatt 983
| || |||||||||||||| |||| || || ||||||||||| || |||||||||
Sbjct: 68 anagtgtcaggcgcttcatctgcttgtccttnaaatgtgatcttctgactntgttgcatt 9
Query: 984 cccttctc 991
||||||||
Sbjct: 8 cccttctc 1
>gb|BE523152.1|BE523152 M33A2STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M33A2 5', mRNA sequence
Length = 405
Score = 81.8 bits (41), Expect = 4e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 1440 gcatcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcatag 1499
||||| || |||||||| |||||||||||||| ||||| || ||||| | || |||||
Sbjct: 353 gcatcctctccatactggtcataaatctcacgcttctccgggtcactaagcacttcataa 294
Query: 1500 gcttgtgcgagctccttgaacttctcggggtcaccgcccttgtcggggtggttcttgata 1559
|||||||| | |||||| ||||||||||| || || ||||| || || || |||||||||
Sbjct: 293 gcttgtgctaactccttaaacttctcgggatctccacccttatcaggatgattcttgata 234
Query: 1560 gcggc 1564
|||||
Sbjct: 233 gcggc 229
Score = 38.2 bits (19), Expect = 4.9
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| ||||||| |||||||||||
Sbjct: 174 gatctcgtagaacttagtgttgtagctcttcttcg 140
>gb|BP851351.1|BP851351 BP851351 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-16-C03 5',
mRNA sequence
Length = 398
Score = 79.8 bits (40), Expect = 1e-012
Identities = 123/148 (83%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccata-ctgatcataaatctcacgtttctc 1477
||||||||||||||||| || ||||| || ||||| ||| |||||||||||||| |||||
Sbjct: 397 ccacccattccttccttgagtgcatcctctccatagctggtcataaatctcacgcttctc 338
Query: 1478 tggatca-ctcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgc 1536
|| ||| || | || ||||| |||||||| | |||||| ||||||||||| || || |
Sbjct: 337 cgggtcagctaagcacttcataagcttgtgctaactccttaaacttctcgggatctccac 278
Query: 1537 ccttgtcggggtggttcttgatagcggc 1564
|||| || || || ||||||||||||||
Sbjct: 277 ccttatcaggatgattcttgatagcggc 250
>gb|BP856956.1|BP856956 BP856956 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-31-N20 5',
mRNA sequence
Length = 418
Score = 77.8 bits (39), Expect = 6e-012
Identities = 126/151 (83%), Gaps = 3/151 (1%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccata-ctgatcataaatctcacgttt 1474
|||||||||||||||||||| || ||||| || ||||| ||| |||||||||||||| ||
Sbjct: 398 ccaccacccattccttccttgagtgcatcctctccatagctggtcataaatctcacgctt 339
Query: 1475 ct-ctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcac 1533
|| | || ||||| | || ||||| |||||||| | |||||| ||||||||||| || |
Sbjct: 338 ctccggggtcactaagcacttcataagcttgtgctaactcctt-aacttctcgggatctc 280
Query: 1534 cgcccttgtcggggtggttcttgatagcggc 1564
| ||||| || || || ||||||||||||||
Sbjct: 279 cacccttatcaggatgattcttgatagcggc 249
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 195 gatctcgtagaacttagtgttgtcgctcttcttcg 161
>gb|BP861198.1|BP861198 BP861198 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-46-N01 5',
mRNA sequence
Length = 364
Score = 77.8 bits (39), Expect = 6e-012
Identities = 96/115 (83%)
Strand = Plus / Minus
Query: 1450 catactgatcataaatctcacgtttctctggatcactcaaaacctcataggcttgtgcga 1509
||||||| |||||||||||||| ||||| || ||||| | || ||||| |||||||| |
Sbjct: 364 catactggtcataaatctcacgcttctccgggtcactaagcacttcataagcttgtgcta 305
Query: 1510 gctccttgaacttctcggggtcaccgcccttgtcggggtggttcttgatagcggc 1564
|||||| ||||||||||| || || ||||| || || || ||||||||||||||
Sbjct: 304 actccttaaacttctcgggatctccacccttatcaggatgattcttgatagcggc 250
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 195 gatctcgtagaacttagtgttgtcgctcttcttcg 161
>gb|T43662.1|T43662 6925 Lambda-PRL2 Arabidopsis thaliana cDNA clone 121P19T7, mRNA
sequence
Length = 539
Score = 73.8 bits (37), Expect = 9e-011
Identities = 115/140 (82%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 1426 ttccttccttaagggcatcttcaccatact-gatcataaatctcacgtttctctggatca 1484
|||||||||| || | ||| || ||||||| | |||||||||||||| ||||| || |||
Sbjct: 365 ttccttccttgagtgnatcctctccatactnggtcataaatctcacgcttctccgggtca 306
Query: 1485 ctcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgcccttgtcg 1544
|| | || ||||| |||||||| | |||||| ||||||||||| || || ||||| ||
Sbjct: 305 ctaagcacttcataagcttgtgctaactccttaaacttctcgggatctccacccttatca 246
Query: 1545 gggtggttcttgatagcggc 1564
|| || ||||||||||||||
Sbjct: 245 ggatgattcttgatagcggc 226
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 171 gatctcgtagaacttagtgttgtcgctcttcttcg 137
>gb|AV544321.1|AV544321 AV544321 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ39f12F 3', mRNA sequence
Length = 471
Score = 73.8 bits (37), Expect = 9e-011
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 337 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 396
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| || ||||| |||||||| |||| ||||||
Sbjct: 397 ttggtatattggcattccctcatcacttatcgccttg 433
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 225 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 270
>gb|BE523253.1|BE523253 M33C6STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M33C6 5', mRNA sequence
Length = 337
Score = 69.9 bits (35), Expect = 1e-009
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 1458 tcataaatctcacgtttctctggatcactcaaaacctcataggcttgtgcgagctccttg 1517
|||||||||||||| ||||| || ||||| | || ||||| |||||||| | ||||||
Sbjct: 337 tcataaatctcacgcttctccgggtcactaagcacttcataagcttgtgctaactcctta 278
Query: 1518 aacttctcggggtcaccgcccttgtcggggtggttcttgatagcggc 1564
||||||||||| || || ||||| || || || ||||||||||||||
Sbjct: 277 aacttctcgggatctccacccttatcaggatgattcttgatagcggc 231
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 176 gatctcgtagaacttagtgttgtcgctcttcttcg 142
>gb|BP785067.1|BP785067 BP785067 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-93-E15 3',
mRNA sequence
Length = 431
Score = 69.9 bits (35), Expect = 1e-009
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 369 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 428
Query: 695 gta 697
|||
Sbjct: 429 gta 431
Score = 56.0 bits (28), Expect = 2e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgt 567
||||||||||||||||||||||||||||
Sbjct: 274 gtctcctcgcattcatctatctccatgt 301
>gb|BP820929.1|BP820929 BP820929 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-56-D08 5',
mRNA sequence
Length = 391
Score = 69.9 bits (35), Expect = 1e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 65 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 6
Query: 695 gta 697
|||
Sbjct: 5 gta 3
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 160 gtctcctcgcattcatctatctccatgtc 132
>dbj|AK220968.1| Arabidopsis thaliana mRNA for dnaJ protein homolog atj3, complete
cds, clone: RAFL22-56-D08
Length = 493
Score = 69.9 bits (35), Expect = 1e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctg 694
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 66 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaatggcctctg 7
Query: 695 gta 697
|||
Sbjct: 6 gta 4
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 161 gtctcctcgcattcatctatctccatgtc 133
>gb|AV785973.1|AV785973 AV785973 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-C20 3',
mRNA sequence
Length = 410
Score = 67.9 bits (34), Expect = 6e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| |||||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 339 cagcgattcggggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 398
Query: 692 ctggta 697
|||||
Sbjct: 399 ttggta 404
>gb|AV794173.1|AV794173 AV794173 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-11-M07 3',
mRNA sequence
Length = 439
Score = 67.9 bits (34), Expect = 6e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
||||| || |||||||| |||||||| ||||| ||||||||||| ||||| ||||| ||
Sbjct: 366 gggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcctttggtatatt 425
Query: 702 ggcatcccctcatc 715
||||| ||||||||
Sbjct: 426 ggcattccctcatc 439
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 245 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 290
>gb|CD533115.1|CD533115 30C8 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 315
Score = 67.9 bits (34), Expect = 6e-009
Identities = 198/249 (79%), Gaps = 3/249 (1%)
Strand = Plus / Minus
Query: 635 cgagtcggggaactccacc-gtgaaatg-aatgtacagcttccccttcatgaaaggcctc 692
|||||| ||||||||||| ||||| || |||||| ||||| ||||||||||| ||||||
Sbjct: 262 cgagtccgggaactccacntgtgaagtggaatgtagagcttacccttcatgaatggcctc 203
Query: 693 tggtaaatcggcatcccctcatcgttta-ttgccttgaattggtcaggtttaacaacttc 751
||||| |||||||| || |||||| ||| |||||||| || |||||||| || || ||
Sbjct: 202 tggtatatcggcattccttcatcgcttaattgccttgtatgaatcaggtttcacgacctc 143
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
||||| | ||||| |||||||| ||| |||| || || ||||||||||||||
Sbjct: 142 cccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattggaa 83
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| | |||||||| ||||| | |||||||| ||||| ||||| ||||||||
Sbjct: 82 gccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccctttct 23
Query: 872 tttgaactt 880
||||||||
Sbjct: 22 cttgaactt 14
>gb|B22558.1|B22558 F20H6TF IGF Arabidopsis thaliana genomic clone F20H6, DNA sequence
Length = 357
Score = 65.9 bits (33), Expect = 2e-008
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 762 gatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacatagt 821
||||||||||||||||| || ||||||| ||| || | ||||| ||||| ||||| |
Sbjct: 186 gatttgatgagaagctgtcttttgtccaaatgggtcaagacaaactggaagccacacaag 245
Query: 822 gcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaacttg 881
|| ||||| ||||| | ||||||||| |||||||| |||| ||||| |||||||||
Sbjct: 246 gcctcggttagagagatggtgtgctccacaaagagatcctcacgctttcgtttgaacttt 305
Query: 882 gagtggtccttctgctg 898
| ||| |||||||||||
Sbjct: 306 gggtgctccttctgctg 322
>gb|F15464.1|F15464 ATTS5712 Ors-B Arabidopsis thaliana cDNA clone OBO236, mRNA sequence
Length = 331
Score = 65.9 bits (33), Expect = 2e-008
Identities = 103/125 (82%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 1440 gcatcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcatag 1499
||||| || |||||||| |||||| ||||||| ||||| || ||||| | || |||||
Sbjct: 319 gcatcctctccatactggtcataa-tctcacgcttctccgggtcactaagcacttcataa 261
Query: 1500 gcttgtgcgagctccttgaacttctcggggtcaccgcccttgtcggggtggttcttgata 1559
|||||||| | |||||| ||||||||||| || || ||||| || || || |||||||||
Sbjct: 260 gcttgtgctaactccttaaacttctcgggatctccacccttatcaggatgattcttgata 201
Query: 1560 gcggc 1564
|||||
Sbjct: 200 gcggc 196
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 141 gatctcgtagaacttagtgttgtcgctcttcttcg 107
>gb|R30458.1|R30458 13063 Lambda-PRL2 Arabidopsis thaliana cDNA clone 163A17T7, mRNA
sequence
Length = 467
Score = 65.9 bits (33), Expect = 2e-008
Identities = 116/142 (81%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 1425 attccttcctt-aagggcatcttcaccatactga-tcataaatctcacgtttctctggat 1482
||||||||| | ||| |||||||| ||||| ||| |||| |||||||| |||| ||||
Sbjct: 365 attccttccntgaagtgcatcttccccatattgaancatagatctcacgcntctcaggat 306
Query: 1483 cactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgcccttgt 1542
|||| ||||| ||||| || ||||| | ||| || ||||| ||||| ||||| ||||| |
Sbjct: 305 cacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcaccacccttat 246
Query: 1543 cggggtggttcttgatagcggc 1564
| || ||||| |||||||||||
Sbjct: 245 caggatggtttttgatagcggc 224
>gb|CL468879.1|CL468879 SAIL_1292_G03.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_1292_G03.v1, DNA sequence
Length = 1028
Score = 61.9 bits (31), Expect = 3e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
||||||||||| |||||||||||||||||||| |||| || ||||| |||||| ||||
Sbjct: 91 gtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcatctc 149
>gb|BP801575.1|BP801575 BP801575 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-20-H19 5',
mRNA sequence
Length = 356
Score = 61.9 bits (31), Expect = 3e-007
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 1449 ccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggcttgtgcg 1508
|||||||| |||||||||||||| ||||| || ||||| | || ||||| ||||||||
Sbjct: 350 ccatactggtcataaatctcacgcttctccgggtcactaagcacttcataagcttgtgct 291
Query: 1509 agctccttgaacttctcgg 1527
| |||||| ||||||||||
Sbjct: 290 aactccttaaacttctcgg 272
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 181 gatctcgtagaacttagtgttgtcgctcttcttcg 147
>gb|BP787373.1|BP787373 BP787373 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-04-A18 3',
mRNA sequence
Length = 429
Score = 60.0 bits (30), Expect = 1e-006
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 358 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 417
Query: 692 ctggta 697
|||||
Sbjct: 418 ttggta 423
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 246 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 291
>gb|T41588.1|T41588 10169 Lambda-PRL2 Arabidopsis thaliana cDNA clone 60H7T7, mRNA
sequence
Length = 592
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 83 gtctcctcgcattcatctatctccatgtc 55
>gb|AI999092.1|AI999092 701554435 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701554435, mRNA sequence
Length = 538
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 392 gtctcctcgcattcatctatctccatgtc 420
Score = 42.1 bits (21), Expect = 0.32
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 640 cggggaactccacc-gtgaaatgaatgtacagcttccccttcatg 683
|||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 494 cggggaactccacctgtgaagtggatgtagagcttacccttcatg 538
>gb|AV789064.1|AV789064 AV789064 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-82-B08 3',
mRNA sequence
Length = 408
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 318 gtctcctcgcattcatctatctccatgtc 346
>gb|AV794879.1|AV794879 AV794879 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-A15 3',
mRNA sequence
Length = 437
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|AV795091.1|AV795091 AV795091 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-P06 3',
mRNA sequence
Length = 428
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 322 gtctcctcgcattcatctatctccatgtc 350
>gb|AV798652.1|AV798652 AV798652 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-17-A16 3',
mRNA sequence
Length = 429
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|AV803620.1|AV803620 AV803620 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-36-C23 3',
mRNA sequence
Length = 411
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|AV804805.1|AV804805 AV804805 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-40-J10 3',
mRNA sequence
Length = 426
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 342 gtctcctcgcattcatctatctccatgtc 370
>gb|AV804914.1|AV804914 AV804914 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-40-P21 3',
mRNA sequence
Length = 411
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|AV807401.1|AV807401 AV807401 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-50-E03 3',
mRNA sequence
Length = 430
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|AV808755.1|AV808755 AV808755 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-56-F04 3',
mRNA sequence
Length = 414
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|AV816259.1|AV816259 AV816259 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-89-P14 3',
mRNA sequence
Length = 408
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 371 gtctcctcgcattcatctatctccatgtc 399
>gb|AV817667.1|AV817667 AV817667 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-95-E06 3',
mRNA sequence
Length = 407
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|AV819751.1|AV819751 AV819751 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-06-N24 3',
mRNA sequence
Length = 408
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 322 gtctcctcgcattcatctatctccatgtc 350
>gb|AV819922.1|AV819922 AV819922 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-08-A18 3',
mRNA sequence
Length = 419
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 324 gtctcctcgcattcatctatctccatgtc 352
>gb|AV546641.1|AV546641 AV546641 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL17c07F 3', mRNA sequence
Length = 464
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 320 gtctcctcgcattcatctatctccatgtc 348
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatga 684
|||||| ||||||||||| ||||| || ||||| ||||| ||||||||||
Sbjct: 415 cgagtccgggaactccactgtgaagtggatgtagagcttacccttcatga 464
>gb|AV561687.1|AV561687 AV561687 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ155h11F 3', mRNA sequence
Length = 421
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|BP571980.1|BP571980 BP571980 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-78-E24 3',
mRNA sequence
Length = 441
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 324 gtctcctcgcattcatctatctccatgtc 352
>gb|BP577517.1|BP577517 BP577517 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-97-A17 3',
mRNA sequence
Length = 408
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 324 gtctcctcgcattcatctatctccatgtc 352
>gb|BP584223.1|BP584223 BP584223 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-45-F03 3',
mRNA sequence
Length = 426
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 324 gtctcctcgcattcatctatctccatgtc 352
>gb|BP589773.1|BP589773 BP589773 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-50-P08 3',
mRNA sequence
Length = 438
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 322 gtctcctcgcattcatctatctccatgtc 350
>gb|BP589938.1|BP589938 BP589938 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-08-P17 3',
mRNA sequence
Length = 416
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|BP620954.1|BP620954 BP620954 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-39-G18 3',
mRNA sequence
Length = 436
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|BP624922.1|BP624922 BP624922 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-42-A07 3',
mRNA sequence
Length = 430
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|BP625703.1|BP625703 BP625703 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-44-M14 3',
mRNA sequence
Length = 443
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 323 gtctcctcgcattcatctatctccatgtc 351
>gb|BP630364.1|BP630364 BP630364 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-19-O14 3',
mRNA sequence
Length = 363
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|BP633767.1|BP633767 BP633767 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-31-P08 3',
mRNA sequence
Length = 443
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 396 gtctcctcgcattcatctatctccatgtc 424
>gb|BP634636.1|BP634636 BP634636 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-35-C09 3',
mRNA sequence
Length = 375
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|BP641882.1|BP641882 BP641882 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-56-M09 3',
mRNA sequence
Length = 433
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|BP643486.1|BP643486 BP643486 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-62-B15 3',
mRNA sequence
Length = 415
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 320 gtctcctcgcattcatctatctccatgtc 348
>gb|BP658449.1|BP658449 BP658449 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-35-M05 3',
mRNA sequence
Length = 385
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 318 gtctcctcgcattcatctatctccatgtc 346
>gb|BP662467.1|BP662467 BP662467 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-43-H15 3',
mRNA sequence
Length = 419
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 325 gtctcctcgcattcatctatctccatgtc 353
>gb|BP662688.1|BP662688 BP662688 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-44-I07 3',
mRNA sequence
Length = 416
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|BP671953.1|BP671953 BP671953 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-42-G09 3',
mRNA sequence
Length = 421
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 286 gtctcctcgcattcatctatctccatgtc 314
Score = 46.1 bits (23), Expect = 0.020
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 635 cgagtcggggaactccaccgtgaaatgaatgtacagctt 673
|||||| ||||||||||| ||||| || |||||||||||
Sbjct: 382 cgagtccgggaactccactgtgaagtggatgtacagctt 420
>gb|BP783083.1|BP783083 BP783083 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-84-L10 3',
mRNA sequence
Length = 421
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 324 gtctcctcgcattcatctatctccatgtc 352
>gb|BP783128.1|BP783128 BP783128 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-84-O04 3',
mRNA sequence
Length = 387
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|BP784896.1|BP784896 BP784896 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-92-I22 3',
mRNA sequence
Length = 411
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 325 gtctcctcgcattcatctatctccatgtc 353
>gb|BP786416.1|BP786416 BP786416 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-99-C13 3',
mRNA sequence
Length = 422
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 325 gtctcctcgcattcatctatctccatgtc 353
>gb|BP793258.1|BP793258 BP793258 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-55-I23 3',
mRNA sequence
Length = 400
Score = 58.0 bits (29), Expect = 5e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatctatctccatgtc 349
>gb|AV805037.1|AV805037 AV805037 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-41-H10 3',
mRNA sequence
Length = 428
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggta 697
||||| || |||||||| |||||||| ||||| ||||||||||| ||||| |||||
Sbjct: 368 gggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcctttggta 423
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 246 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 291
>gb|CA963966.1|CA963966 cATI008A10AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA,
mRNA sequence
Length = 487
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttctt 1015
||||||||||| |||| ||||||||||||||| |||| || ||||| ||||||||
Sbjct: 458 gtgatcttctgactgttttgcattcccttctccacattcacttcaagcaccttctt 403
>gb|BP585247.1|BP585247 BP585247 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-01-N22 3',
mRNA sequence
Length = 450
Score = 56.0 bits (28), Expect = 2e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgt 567
||||||||||||||||||||||||||||
Sbjct: 324 gtctcctcgcattcatctatctccatgt 351
>gb|BP595678.1|BP595678 BP595678 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-31-B14 3',
mRNA sequence
Length = 456
Score = 56.0 bits (28), Expect = 2e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 396 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 455
>gb|BP787235.1|BP787235 BP787235 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-03-I17 3',
mRNA sequence
Length = 419
Score = 56.0 bits (28), Expect = 2e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 359 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 418
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 247 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 292
>gb|BP805075.1|BP805075 BP805075 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-04-H05 5',
mRNA sequence
Length = 385
Score = 56.0 bits (28), Expect = 2e-005
Identities = 86/104 (82%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 1461 taaatctcacgtttctctggatcactcaaaacctcataggcttgtgcgagctccttgaac 1520
||||||||||| ||||| || ||||| | || ||||| |||||||| | |||||| |||
Sbjct: 385 taaatctcacgcttctccgggtcactaagcacttcataagcttgtgctaactcctt-aac 327
Query: 1521 ttctcggggtcaccgcccttgtcggggtggttcttgatagcggc 1564
|||||||| || || ||||| || || || ||||||||||||||
Sbjct: 326 ttctcgggatctccacccttatcaggatgattcttgatagcggc 283
Score = 38.2 bits (19), Expect = 4.9
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| ||||| |||||||||||||
Sbjct: 229 gatctcgtagaacttagtgttctcgctcttcttcg 195
>emb|CR381175.1| Arabidopsis thaliana transposon insertion STS GT_5.109451, sequence
tagged site
Length = 503
Score = 56.0 bits (28), Expect = 2e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 72 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcct 13
Score = 44.1 bits (22), Expect = 0.080
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||| ||||| ||||| || ||||| |||||
Sbjct: 184 tgttcacatcatgcagagttgtctcttcgcagtcgtctatttccat 139
>gb|BE528498.1|BE528498 M79N03STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600037615R1 5', mRNA sequence
Length = 258
Score = 54.0 bits (27), Expect = 8e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1494 tcataggcttgtgcgagctccttgaacttctcggggtcaccgcccttgtcggggtggttc 1553
||||| |||||||| | |||||| ||||||||||| || || ||||| || || || |||
Sbjct: 253 tcataagcttgtgctaactccttaaacttctcgggatctccacccttatcaggatgattc 194
Query: 1554 ttgatagcggc 1564
|||||||||||
Sbjct: 193 ttgatagcggc 183
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 128 gatctcgtagaacttagtgttgtcgctcttcttcg 94
>gb|AV793801.1|AV793801 AV793801 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-10-E19 3',
mRNA sequence
Length = 447
Score = 54.0 bits (27), Expect = 8e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatg 566
|||||||||||||||||||||||||||
Sbjct: 421 gtctcctcgcattcatctatctccatg 447
>gb|CF773709.1|CF773709 AG_FSL_21E01 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 21E01, mRNA sequence
Length = 435
Score = 54.0 bits (27), Expect = 8e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 542 ctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||||||||
Sbjct: 241 ctcctcgcattcatctatctccatgtc 267
>gb|BP594232.1|BP594232 BP594232 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-25-B22 3',
mRNA sequence
Length = 446
Score = 54.0 bits (27), Expect = 8e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatg 566
|||||||||||||||||||||||||||
Sbjct: 420 gtctcctcgcattcatctatctccatg 446
>gb|BP783214.1|BP783214 BP783214 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-85-E05 3',
mRNA sequence
Length = 400
Score = 54.0 bits (27), Expect = 8e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcc 690
|||||| || ||||| || |||||||| |||||||| ||||| ||||||||||| ||||
Sbjct: 342 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaacggcc 400
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 230 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 275
>gb|BP836611.1|BP836611 BP836611 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-16-P10 5',
mRNA sequence
Length = 350
Score = 54.0 bits (27), Expect = 8e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatg 566
|||||||||||||||||||||||||||
Sbjct: 27 gtctcctcgcattcatctatctccatg 1
>gb|BH251731.1|BH251731 SALK_012035 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_012035, DNA sequence
Length = 386
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 214 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 259
>gb|Z18100.1|Z18100 ATTS0589 Versailles-VB Arabidopsis thaliana cDNA clone VBV20-12592,
mRNA sequence
Length = 419
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 228 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 273
>gb|F20031.1|F20031 ATTS6070 AC16H Arabidopsis thaliana cDNA clone TAP0282 3' similar
to DNAJ homologue, mRNA sequence
Length = 336
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 284 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 329
>gb|C99756.1|C99756 C99756 YAC clone CIC7E11 region-specific cDNA Arabidopsis thaliana
cDNA clone 7E11-19, mRNA sequence
Length = 393
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 205 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 250
>gb|AV795946.1|AV795946 AV795946 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-19-O10 3',
mRNA sequence
Length = 432
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 282 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 327
>gb|AV804585.1|AV804585 AV804585 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-39-L18 3',
mRNA sequence
Length = 393
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 245 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 290
>gb|AV561974.1|AV561974 AV561974 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ161h07F 3', mRNA sequence
Length = 403
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 284 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 329
>gb|AV566588.1|AV566588 AV566588 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ246d01F 3', mRNA sequence
Length = 340
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 258 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 303
>gb|BP566081.1|BP566081 BP566081 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-52-H07 3',
mRNA sequence
Length = 443
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 284 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 329
>gb|BP574880.1|BP574880 BP574880 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-89-O05 3',
mRNA sequence
Length = 387
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 282 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 327
>gb|BP612298.1|BP612298 BP612298 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-88-P14 3',
mRNA sequence
Length = 434
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 282 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 327
>gb|BP665864.1|BP665864 BP665864 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-17-M23 3',
mRNA sequence
Length = 431
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 247 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 292
Score = 48.1 bits (24), Expect = 0.005
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaa 685
||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 368 gggaattcaaccgtgaagtgaatgtatagcttacccttcatgaa 411
>gb|BP668598.1|BP668598 BP668598 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-27-N19 3',
mRNA sequence
Length = 412
Score = 52.0 bits (26), Expect = 3e-004
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaa 685
|||||| || ||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 356 cagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatgaa 409
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctat 559
||||||||||||||| ||||||||| ||||| || |||||
Sbjct: 245 tgttcacatcatgcagagtcgtctcttcgcagtcgtctat 284
>gb|BP781067.1|BP781067 BP781067 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-76-C22 3',
mRNA sequence
Length = 398
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 230 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 275
Score = 48.1 bits (24), Expect = 0.005
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaa 685
||||| || |||||||| |||||||| ||||| |||||||||||
Sbjct: 352 gggaattcaaccgtgaagtgaatgtatagcttacccttcatgaa 395
>gb|BP791689.1|BP791689 BP791689 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-48-I10 3',
mRNA sequence
Length = 407
Score = 52.0 bits (26), Expect = 3e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 286 tgttcacatcatgcagagtcgtctcttcgcagtcgtctatttccat 331
>gb|AV521330.1|AV521330 AV521330 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ50h05F 3', mRNA
sequence
Length = 362
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||||| ||||||
Sbjct: 272 gtctcctcgcattcatctatctgcatgtc 300
>gb|BP591162.1|BP591162 BP591162 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-13-K04 3',
mRNA sequence
Length = 402
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
|||||||||||||||||||| ||||||||
Sbjct: 371 gtctcctcgcattcatctatttccatgtc 399
>gb|BP591799.1|BP591799 BP591799 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-B08 3',
mRNA sequence
Length = 440
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
||||||||||||||||||||||| |||||
Sbjct: 323 gtctcctcgcattcatctatctcaatgtc 351
>gb|BP660166.1|BP660166 BP660166 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-42-O14 3',
mRNA sequence
Length = 406
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
||||||||||||||||||||||| |||||
Sbjct: 367 gtctcctcgcattcatctatctcaatgtc 395
>gb|BP664920.1|BP664920 BP664920 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-14-H09 3',
mRNA sequence
Length = 420
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 651 accgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 377 accgtgaagtgaatgtatagcttacccttcatgaacggcct 417
>gb|BP847945.1|BP847945 BP847945 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-K22 5',
mRNA sequence
Length = 381
Score = 50.1 bits (25), Expect = 0.001
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 1423 ccattccttccttaagggcatcttcaccatactgatcataaatctcacg-tttctctgga 1481
||||||||||||| | ||||||| ||||| |||||||| |||||||| |||||| |||
Sbjct: 316 ccattccttcctt-ggttcatcttccccatattgatcatagatctcacgctttctcagga 258
Query: 1482 tcactcaaaacctcata 1498
||||| ||||| |||||
Sbjct: 257 tcacttaaaacttcata 241
>gb|CL477480.1|CL477480 SAIL_274_A01.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_274_A01.v1, DNA sequence
Length = 922
Score = 48.1 bits (24), Expect = 0.005
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgt 567
|||||||||||||||||||||| |||||
Sbjct: 330 gtctcctcgcattcatctatcttcatgt 357
>gb|AA067437.1|AA067437 26282 Lambda-PRL2 Arabidopsis thaliana cDNA clone 91C9T7, mRNA
sequence
Length = 307
Score = 48.1 bits (24), Expect = 0.005
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttct 1017
||||||||||| ||||||||||||||||| | | || || ||||| ||||||||||
Sbjct: 281 gtgatcttctgattgtgttgcattcccttcnccanatttacttcaagcaccttcttct 224
Score = 40.1 bits (20), Expect = 1.2
Identities = 39/46 (84%)
Strand = Plus / Minus
Query: 1183 tcattgaagcaccagacttcgagcccttgcccttgcacttggagca 1228
|||||||||| |||||||| || |||||| ||| ||||| |||||
Sbjct: 58 tcattgaagcnccagactttgaacccttggncttacactttgagca 13
>gb|T43233.1|T43233 6496 Lambda-PRL2 Arabidopsis thaliana cDNA clone 119E16T7, mRNA
sequence
Length = 288
Score = 48.1 bits (24), Expect = 0.005
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 1494 tcataggcttgtgcgagctccttgaacttctcggggtcaccgcccttgtcggggtggttc 1553
||||| |||||||| | |||||| ||||||||||| || || ||||| || || || |||
Sbjct: 256 tcataagcttgtgctaactccttaaacttctcgggatctccacccttatcaggatgattc 197
Query: 1554 ttgatagc 1561
||||||||
Sbjct: 196 ttgatagc 189
Score = 40.1 bits (20), Expect = 1.2
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1630 acttggtgttgtcgctcttcttcg 1653
|||| |||||||||||||||||||
Sbjct: 120 acttagtgttgtcgctcttcttcg 97
>gb|AV793490.1|AV793490 AV793490 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-08-N21 3',
mRNA sequence
Length = 443
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctcc 563
||||||||||||||||||||||||
Sbjct: 420 gtctcctcgcattcatctatctcc 443
>gb|AV796965.1|AV796965 AV796965 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-10-E09 3',
mRNA sequence
Length = 441
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctcc 563
||||||||||||||||||||||||
Sbjct: 400 gtctcctcgcattcatctatctcc 423
>gb|BP646511.1|BP646511 BP646511 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-72-G01 3',
mRNA sequence
Length = 372
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctat 559
||||||||||||||| ||||||||| ||||| || |||||
Sbjct: 228 tgttcacatcatgcagagtcgtctcttcgcagtcgtctat 267
>gb|BP661444.1|BP661444 BP661444 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-07-C18 3',
mRNA sequence
Length = 385
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 545 ctcgcattcatctatctccatgtc 568
||||||||||||||||||||||||
Sbjct: 326 ctcgcattcatctatctccatgtc 349
>gb|BP670769.1|BP670769 BP670769 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-36-J18 3',
mRNA sequence
Length = 430
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctat 559
||||||||||||||| ||||||||| ||||| || |||||
Sbjct: 295 tgttcacatcatgcagagtcgtctcttcgcagtcgtctat 334
>gb|B26210.1|B26210 T4L6TFB TAMU Arabidopsis thaliana genomic clone T4L6, DNA sequence
Length = 626
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 384 gatctcgtagaacttagtgttgtcgctcttcttcg 418
>emb|AL089832.1|CNS00TL6 Arabidopsis thaliana genome survey sequence T7 end of BAC T4L6 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 523
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 377 gatctcgtagaacttagtgttgtcgctcttcttcg 411
>gb|T22486.1|T22486 4494 Lambda-PRL2 Arabidopsis thaliana cDNA clone 105I4T7, mRNA
sequence
Length = 431
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 142 gatctcgtagaacttagtgttgtcgctcttcttcg 108
Score = 38.2 bits (19), Expect = 4.9
Identities = 40/47 (85%)
Strand = Plus / Minus
Query: 1518 aacttctcggggtcaccgcccttgtcggggtggttcttgatagcggc 1564
||||||||||| || || ||||| || || || ||||||||||||||
Sbjct: 243 aacttctcgggatctccacccttatcaggatgattcttgatagcggc 197
>gb|N37456.1|N37456 18683 Lambda-PRL2 Arabidopsis thaliana cDNA clone 212I2T7, mRNA
sequence
Length = 405
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 216 gatctcgtagaacttagtgttgtcgctcttcttcg 182
>gb|BP847336.1|BP847336 BP847336 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-01-F01 5',
mRNA sequence
Length = 401
Score = 46.1 bits (23), Expect = 0.020
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|||||||||||||||||| | || ||||| || |||||||| |||| |||||||| |||
Sbjct: 388 ccaccacccattccttccgtgagtgcatcctctccatactggtcat-gatctcacgcttc 330
Query: 1476 tctggatcact 1486
|| |||||||
Sbjct: 329 tcccgatcact 319
Score = 38.2 bits (19), Expect = 4.9
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| || ||||||||||||||||
Sbjct: 185 gatctcgtagaacttagtattgtcgctcttcttcg 151
>emb|AJ529236.1|ATH529236 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
181A12
Length = 481
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 234 gatctcgtagaacttagtgttgtcgctcttcttcg 200
>emb|AJ529837.1|ATH529837 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
195D10
Length = 721
Score = 46.1 bits (23), Expect = 0.020
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1619 gatctcatagtacttggtgttgtcgctcttcttcg 1653
|||||| ||| |||| |||||||||||||||||||
Sbjct: 234 gatctcgtagaacttagtgttgtcgctcttcttcg 200
>gb|BE845095.1|BE845095 AD06E12T7 AD A. thaliana (Col-0 gl1) subtracted library enriched
for salt-induced transcripts;10-14 day seedlings 4h
160mM NaCl stress Arabidopsis thaliana cDNA clone
AD06E12 similar to DNAJ PROTEIN HOMOLOG ATJ, mRNA
sequence
Length = 367
Score = 44.1 bits (22), Expect = 0.080
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| |||||||| ||||| || ||||| |||||
Sbjct: 246 tgttcacatcatgcaaagtcgtcttttcgcagtcgtctatttccat 291
>gb|AU230536.1|AU230536 AU230536 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-64-P10 3',
mRNA sequence
Length = 373
Score = 44.1 bits (22), Expect = 0.080
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtctcctcgcattcatctatctccat 565
||||||||||||||| |||||| || ||||| || ||||| |||||
Sbjct: 224 tgttcacatcatgcagagtcgtatcttcgcagtcgtctatttccat 269
>gb|AI100128.1|AI100128 34503 Lambda-PRL2 Arabidopsis thaliana cDNA clone 105I4XP 3', mRNA
sequence
Length = 571
Score = 42.1 bits (21), Expect = 0.32
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
||||||||||||||| |||||||||||||
Sbjct: 175 gtctcctcgcattca-ctatctccatgtc 148
>gb|AV518231.1|AV518231 AV518231 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD13c02F 3', mRNA
sequence
Length = 313
Score = 42.1 bits (21), Expect = 0.32
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Plus
Query: 540 gtctcctcgc-attcatctatctccatgt 567
|||||||||| ||||||||||||||||||
Sbjct: 248 gtctcctcgccattcatctatctccatgt 276
>gb|AV549224.1|AV549224 AV549224 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ05a06R 5', mRNA sequence
Length = 254
Score = 42.1 bits (21), Expect = 0.32
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 520 tgttcacatcatgcatagtcgtctc 544
||||||||||||||| |||||||||
Sbjct: 37 tgttcacatcatgcagagtcgtctc 13
>gb|BP592045.1|BP592045 BP592045 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-N16 3',
mRNA sequence
Length = 441
Score = 42.1 bits (21), Expect = 0.32
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatc 560
|||||||||||||||||||||
Sbjct: 421 gtctcctcgcattcatctatc 441
>gb|BP639833.1|BP639833 BP639833 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-49-E20 3',
mRNA sequence
Length = 383
Score = 42.1 bits (21), Expect = 0.32
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
||||||||||||| |||||||||||||||
Sbjct: 324 gtctcctcgcatt-atctatctccatgtc 351
>gb|BP654182.1|BP654182 BP654182 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-16-K23 3',
mRNA sequence
Length = 378
Score = 42.1 bits (21), Expect = 0.32
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatctatctccatgtc 568
||||||||||||| |||||| ||||||||
Sbjct: 321 gtctcctcgcattaatctatttccatgtc 349
>gb|B25069.1|B25069 F24J14TR IGF Arabidopsis thaliana genomic clone F24J14, DNA sequence
Length = 260
Score = 40.1 bits (20), Expect = 1.2
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1630 acttggtgttgtcgctcttcttcg 1653
|||| |||||||||||||||||||
Sbjct: 144 acttagtgttgtcgctcttcttcg 167
>gb|BH757696.1|BH757696 SALK_004406.42.10.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_004406.42.10.x,
DNA sequence
Length = 365
Score = 40.1 bits (20), Expect = 1.2
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1443 tcttcaccatactgatcataaatctcacgttt 1474
||||||||||| |||||||| |||| ||||||
Sbjct: 123 tcttcaccatattgatcatagatctgacgttt 154
>emb|AJ596042.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
427G06, genomic survey sequence
Length = 239
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 56 cctgctgcttccaccacctc 75
>gb|AI997521.1|AI997521 701554392 A. thaliana, Columbia Col-0, root-2 Arabidopsis thaliana
cDNA clone 701554392, mRNA sequence
Length = 561
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 337 cctgctgcttccaccacctc 356
>gb|AV542537.1|AV542537 AV542537 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ185g12F 3', mRNA sequence
Length = 403
Score = 40.1 bits (20), Expect = 1.2
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 520 tgttcacatcatgcatagtcgtct 543
||||||||||||||| ||||||||
Sbjct: 277 tgttcacatcatgcagagtcgtct 300
>gb|BP586464.1|BP586464 BP586464 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-06-H04 3',
mRNA sequence
Length = 443
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 545 ctcgcattcatctatctcca 564
||||||||||||||||||||
Sbjct: 424 ctcgcattcatctatctcca 443
>gb|BP591132.1|BP591132 BP591132 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-13-I09 3',
mRNA sequence
Length = 416
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 352 cctgctgcttccaccacctc 371
>gb|AY081346.1| Arabidopsis thaliana unknown protein (At5g64670) mRNA, complete cds
Length = 1212
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 724 cctgctgcttccaccacctc 705
>gb|AY128843.1| Arabidopsis thaliana unknown protein (At5g64670) mRNA, complete cds
Length = 918
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 626 cctgctgcttccaccacctc 607
>gb|AY085231.1| Arabidopsis thaliana clone 14033 mRNA, complete sequence
Length = 1087
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 735 cctgctgcttccaccacctc 716
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete
sequence
Length = 144422
Score = 40.1 bits (20), Expect = 1.2
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgttt 1474
||||||||||| |||||||| |||| ||||||
Sbjct: 16799 tcttcaccatattgatcatagatctgacgttt 16768
>emb|BX832516.1|CNS0A0XV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH78ZC03 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 594
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 246 cctgctgcttccaccacctc 227
>dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUB3
Length = 82188
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 71923 cctgctgcttccaccacctc 71942
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 40.1 bits (20), Expect = 1.2
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgttt 1474
||||||||||| |||||||| |||| ||||||
Sbjct: 6192271 tcttcaccatattgatcatagatctgacgttt 6192240
>ref|NM_104665.1| Arabidopsis thaliana heat shock protein binding / unfolded protein
binding AT1G59725 mRNA, complete cds
Length = 996
Score = 40.1 bits (20), Expect = 1.2
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgttt 1474
||||||||||| |||||||| |||| ||||||
Sbjct: 218 tcttcaccatattgatcatagatctgacgttt 187
>ref|NM_125863.2| Arabidopsis thaliana structural constituent of ribosome AT5G64670
mRNA, complete cds
Length = 1223
Score = 40.1 bits (20), Expect = 1.2
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1337 cctgctgcttccaccacctc 1356
||||||||||||||||||||
Sbjct: 735 cctgctgcttccaccacctc 716
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 40.1 bits (20), Expect = 1.2
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgttt 1474
||||||||||| |||||||| |||| ||||||
Sbjct: 21954620 tcttcaccatattgatcatagatctgacgttt 21954589
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1377 aatgatgagaaaatgtcaa 1395
|||||||||||||||||||
Sbjct: 12133677 aatgatgagaaaatgtcaa 12133659
>emb|AL947017.1| Arabidopsis thaliana T-DNA flanking sequence GK-300H02-015599,
genomic survey sequence
Length = 473
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1362 aaagagggtccaaaaaatg 1380
|||||||||||||||||||
Sbjct: 159 aaagagggtccaaaaaatg 177
>emb|AL947019.1| Arabidopsis thaliana T-DNA flanking sequence GK-300H03-015599,
genomic survey sequence
Length = 475
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1362 aaagagggtccaaaaaatg 1380
|||||||||||||||||||
Sbjct: 162 aaagagggtccaaaaaatg 180
>gb|BP622335.1|BP622335 BP622335 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-02-N05 3',
mRNA sequence
Length = 339
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 540 gtctcctcgcattcatcta 558
|||||||||||||||||||
Sbjct: 321 gtctcctcgcattcatcta 339
>gb|BP659683.1|BP659683 BP659683 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-40-M18 3',
mRNA sequence
Length = 396
Score = 38.2 bits (19), Expect = 4.9
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 817 atagtgcttcggtcagagacaag 839
||||||||| |||||||||||||
Sbjct: 338 atagtgctttggtcagagacaag 360
>gb|BP833672.1|BP833672 BP833672 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-97-B09 5',
mRNA sequence
Length = 343
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 540 gtctcctcgcattcatcta 558
|||||||||||||||||||
Sbjct: 21 gtctcctcgcattcatcta 3
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1377 aatgatgagaaaatgtcaa 1395
|||||||||||||||||||
Sbjct: 12142479 aatgatgagaaaatgtcaa 12142461
>emb|AX510222.1| Sequence 4917 from Patent WO0216655
Length = 1643
Score = 38.2 bits (19), Expect = 4.9
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1375 aaaatgatgagaaaatgtcaaatggat 1401
|||| |||| |||||||||||||||||
Sbjct: 949 aaaaagatgcgaaaatgtcaaatggat 923
>gb|BT004062.1| Arabidopsis thaliana clone RAFL15-06-A12 (R20508) unknown protein
(At5g25580) mRNA, complete cds
Length = 1485
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1253 cttctttgagattccattg 1271
|||||||||||||||||||
Sbjct: 724 cttctttgagattccattg 706
>gb|BT005141.1| Arabidopsis thaliana clone U20508 unknown protein (At5g25580) mRNA,
complete cds
Length = 1249
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1253 cttctttgagattccattg 1271
|||||||||||||||||||
Sbjct: 675 cttctttgagattccattg 657
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete
sequence
Length = 116156
Score = 38.2 bits (19), Expect = 4.9
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1375 aaaatgatgagaaaatgtcaaatggat 1401
|||| |||| |||||||||||||||||
Sbjct: 91779 aaaaagatgcgaaaatgtcaaatggat 91805
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence
Length = 110684
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1253 cttctttgagattccattg 1271
|||||||||||||||||||
Sbjct: 62758 cttctttgagattccattg 62740
>gb|AC051630.4|AC051630 Arabidopsis thaliana chromosome 1 BAC F10C21 genomic sequence, complete
sequence
Length = 97242
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1377 aatgatgagaaaatgtcaa 1395
|||||||||||||||||||
Sbjct: 57455 aatgatgagaaaatgtcaa 57437
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1362 aaagagggtccaaaaaatg 1380
|||||||||||||||||||
Sbjct: 13232807 aaagagggtccaaaaaatg 13232789
Score = 38.2 bits (19), Expect = 4.9
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1375 aaaatgatgagaaaatgtcaaatggat 1401
|||| |||| |||||||||||||||||
Sbjct: 8374219 aaaaagatgcgaaaatgtcaaatggat 8374193
>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project)
Length = 89826
Score = 38.2 bits (19), Expect = 4.9
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1375 aaaatgatgagaaaatgtcaaatggat 1401
|||| |||| |||||||||||||||||
Sbjct: 70926 aaaaagatgcgaaaatgtcaaatggat 70900
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60
Length = 196677
Score = 38.2 bits (19), Expect = 4.9
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1375 aaaatgatgagaaaatgtcaaatggat 1401
|||| |||| |||||||||||||||||
Sbjct: 120832 aaaaagatgcgaaaatgtcaaatggat 120806
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86
Length = 198780
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1362 aaagagggtccaaaaaatg 1380
|||||||||||||||||||
Sbjct: 7570 aaagagggtccaaaaaatg 7552
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2
Length = 198354
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1362 aaagagggtccaaaaaatg 1380
|||||||||||||||||||
Sbjct: 49408 aaagagggtccaaaaaatg 49426
>ref|NM_122469.2| Arabidopsis thaliana unknown protein AT5G25580 mRNA, complete cds
Length = 1466
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1253 cttctttgagattccattg 1271
|||||||||||||||||||
Sbjct: 720 cttctttgagattccattg 702
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 38.2 bits (19), Expect = 4.9
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1362 aaagagggtccaaaaaatg 1380
|||||||||||||||||||
Sbjct: 17320014 aaagagggtccaaaaaatg 17319996
Score = 38.2 bits (19), Expect = 4.9
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1375 aaaatgatgagaaaatgtcaaatggat 1401
|||| |||| |||||||||||||||||
Sbjct: 12461457 aaaaagatgcgaaaatgtcaaatggat 12461431
Database: At_nucl_with_EST.fasta
Posted date: May 2, 2006 2:53 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 858,960
Number of Sequences: 1013581
Number of extensions: 858960
Number of successful extensions: 65109
Number of sequences better than 10.0: 233
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 60531
Number of HSP's gapped (non-prelim): 4532
length of query: 1723
length of database: 908,940,872
effective HSP length: 21
effective length of query: 1702
effective length of database: 887,655,671
effective search space: 1510789952042
effective search space used: 1510789952042
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)