BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192958.2.1
(1629 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV524587.1|AV524587 AV524587 Arabidopsis thaliana aboveg... 178 2e-042
gb|AY045655.1| Arabidopsis thaliana AT3g44110/F26G5_60 mRNA... 178 2e-042
gb|AY035087.1| Arabidopsis thaliana putative dnaJ protein h... 178 2e-042
gb|AY113878.1| Arabidopsis thaliana putative DnaJ-like prot... 178 2e-042
emb|AX506322.1| Sequence 1017 from Patent WO0216655 178 2e-042
ref|NM_114279.2| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3)... 178 2e-042
gb|CB259915.1|CB259915 13-E9624-013-004-J03-T7R MPIZ-ADIS-0... 170 5e-040
gb|U22340.1|ATU22340 Arabidopsis thaliana DnaJ homolog (atj... 170 5e-040
gb|AY088078.1| Arabidopsis thaliana clone 40976 mRNA, compl... 170 5e-040
gb|AV785278.1|AV785278 AV785278 RAFL6 Arabidopsis thaliana ... 155 3e-035
gb|U64912.1|ATU64912 Arabidopsis thaliana farnesylated prot... 147 7e-033
gb|AV785374.1|AV785374 AV785374 RAFL6 Arabidopsis thaliana ... 137 7e-030
gb|AV542282.1|AV542282 AV542282 Arabidopsis thaliana roots ... 137 7e-030
ref|NM_180322.1| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3)... 129 2e-027
gb|AV531399.1|AV531399 AV531399 Arabidopsis thaliana flower... 125 3e-026
gb|BU636099.1|BU636099 045E06 Infected Arabidopsis Leaf Ara... 123 1e-025
gb|CD533115.1|CD533115 30C8 Arabidopsis Leaf Senescence Lib... 113 1e-022
gb|AV562719.1|AV562719 AV562719 Arabidopsis thaliana green ... 111 4e-022
gb|CB258912.1|CB258912 09-E011082-014-003-B03-T7R MPIZ-ADIS... 109 2e-021
gb|AV526975.1|AV526975 AV526975 Arabidopsis thaliana aboveg... 109 2e-021
gb|AV524937.2|AV524937 AV524937 Arabidopsis thaliana aboveg... 109 2e-021
gb|CK119390.1|CK119390 201l01.p1 AtM1 Arabidopsis thaliana ... 109 2e-021
gb|BP561192.1|BP561192 BP561192 RAFL6 Arabidopsis thaliana ... 109 2e-021
gb|BP561520.2|BP561520 BP561520 RAFL8 Arabidopsis thaliana ... 109 2e-021
gb|BP812305.1|BP812305 BP812305 RAFL19 Arabidopsis thaliana... 109 2e-021
gb|BP819333.1|BP819333 BP819333 RAFL19 Arabidopsis thaliana... 109 2e-021
gb|BP821075.1|BP821075 BP821075 RAFL19 Arabidopsis thaliana... 109 2e-021
gb|BP825757.1|BP825757 BP825757 RAFL19 Arabidopsis thaliana... 109 2e-021
gb|BP831553.1|BP831553 BP831553 RAFL19 Arabidopsis thaliana... 109 2e-021
gb|BP835283.1|BP835283 BP835283 RAFL19 Arabidopsis thaliana... 109 2e-021
gb|BP851282.1|BP851282 BP851282 RAFL21 Arabidopsis thaliana... 109 2e-021
gb|BP865904.1|BP865904 BP865904 RAFL21 Arabidopsis thaliana... 109 2e-021
gb|BP867654.1|BP867654 BP867654 RAFL21 Arabidopsis thaliana... 109 2e-021
gb|BP820936.1|BP820936 BP820936 RAFL19 Arabidopsis thaliana... 107 6e-021
gb|AV824391.1|AV824391 AV824391 RAFL6 Arabidopsis thaliana ... 105 2e-020
gb|AU239248.1|AU239248 AU239248 RAFL19 Arabidopsis thaliana... 105 2e-020
gb|AV550422.1|AV550422 AV550422 Arabidopsis thaliana roots ... 105 2e-020
gb|BP820203.1|BP820203 BP820203 RAFL19 Arabidopsis thaliana... 105 2e-020
gb|BP820336.1|BP820336 BP820336 RAFL19 Arabidopsis thaliana... 105 2e-020
gb|BP847929.1|BP847929 BP847929 RAFL21 Arabidopsis thaliana... 105 2e-020
gb|BP853093.1|BP853093 BP853093 RAFL21 Arabidopsis thaliana... 105 2e-020
gb|BP855038.1|BP855038 BP855038 RAFL21 Arabidopsis thaliana... 105 2e-020
gb|BP855559.1|BP855559 BP855559 RAFL21 Arabidopsis thaliana... 105 2e-020
gb|BP859641.1|BP859641 BP859641 RAFL21 Arabidopsis thaliana... 105 2e-020
gb|BP865537.1|BP865537 BP865537 RAFL21 Arabidopsis thaliana... 105 2e-020
gb|L36113.1|ATHATJ Arabidopsis thaliana chaperone protein (... 105 2e-020
emb|BX831588.1|CNS0A0V0 Arabidopsis thaliana Full-length cD... 105 2e-020
dbj|AK118386.1| Arabidopsis thaliana At5g22060 mRNA for put... 105 2e-020
ref|NM_122127.2| Arabidopsis thaliana ATJ2 AT5G22060 (ATJ2)... 105 2e-020
gb|BE526451.1|BE526451 M65D04STM Arabidopsis developing see... 103 9e-020
gb|AV518673.2|AV518673 AV518673 Arabidopsis thaliana aboveg... 103 9e-020
gb|BP817250.1|BP817250 BP817250 RAFL19 Arabidopsis thaliana... 103 9e-020
gb|BP837230.1|BP837230 BP837230 RAFL19 Arabidopsis thaliana... 103 9e-020
gb|BP851122.1|BP851122 BP851122 RAFL21 Arabidopsis thaliana... 101 4e-019
gb|BZ769122.1|BZ769122 SALK_141625.50.70.x Arabidopsis thal... 100 1e-018
emb|AJ601167.1| Arabidopsis thaliana T-DNA flanking sequenc... 100 1e-018
gb|AV821835.1|AV821835 AV821835 RAFL4 Arabidopsis thaliana ... 100 1e-018
gb|AF032883.1|AF032883 Arabidopsis thaliana DnaJ homolog At... 100 1e-018
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 100 1e-018
emb|AL353814.1|ATF26G5 Arabidopsis thaliana DNA chromosome ... 100 1e-018
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 100 1e-018
gb|R29960.1|R29960 12565 Lambda-PRL2 Arabidopsis thaliana c... 98 6e-018
gb|BE527925.1|BE527925 M70M03STM Arabidopsis developing see... 98 6e-018
emb|BX830687.1|CNS0A0QX Arabidopsis thaliana Full-length cD... 98 6e-018
gb|AV538224.1|AV538224 AV538224 Arabidopsis thaliana roots ... 96 2e-017
gb|BP846461.1|BP846461 BP846461 RAFL21 Arabidopsis thaliana... 96 2e-017
gb|BP813111.1|BP813111 BP813111 RAFL19 Arabidopsis thaliana... 92 4e-016
gb|BP832844.1|BP832844 BP832844 RAFL19 Arabidopsis thaliana... 92 4e-016
gb|AV782390.1|AV782390 AV782390 RAFL4 Arabidopsis thaliana ... 88 6e-015
gb|CA781754.1|CA781754 048C12AF Infected Arabidopsis Leaf A... 88 6e-015
gb|AV540757.1|AV540757 AV540757 Arabidopsis thaliana roots ... 88 6e-015
gb|AV542350.1|AV542350 AV542350 Arabidopsis thaliana roots ... 88 6e-015
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 84 9e-014
emb|AL589883.1|ATT6G21 Arabidopsis thaliana DNA chromosome ... 84 9e-014
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 84 9e-014
gb|H76988.1|H76988 17419 Lambda-PRL2 Arabidopsis thaliana c... 82 3e-013
gb|BE523152.1|BE523152 M33A2STM Arabidopsis developing seed... 82 3e-013
gb|BP785067.1|BP785067 BP785067 RAFL7 Arabidopsis thaliana ... 80 1e-012
gb|BP820929.1|BP820929 BP820929 RAFL19 Arabidopsis thaliana... 80 1e-012
dbj|AK220968.1| Arabidopsis thaliana mRNA for dnaJ protein ... 80 1e-012
gb|BP816535.1|BP816535 BP816535 RAFL19 Arabidopsis thaliana... 78 5e-012
gb|T43662.1|T43662 6925 Lambda-PRL2 Arabidopsis thaliana cD... 76 2e-011
gb|T76230.1|T76230 11008 Lambda-PRL2 Arabidopsis thaliana c... 76 2e-011
gb|BP851351.1|BP851351 BP851351 RAFL21 Arabidopsis thaliana... 74 8e-011
gb|BP856956.1|BP856956 BP856956 RAFL21 Arabidopsis thaliana... 74 8e-011
gb|BP806707.1|BP806707 BP806707 RAFL16 Arabidopsis thaliana... 72 3e-010
gb|F15464.1|F15464 ATTS5712 Ors-B Arabidopsis thaliana cDNA... 70 1e-009
gb|BE523253.1|BE523253 M33C6STM Arabidopsis developing seed... 70 1e-009
gb|BP861198.1|BP861198 BP861198 RAFL21 Arabidopsis thaliana... 70 1e-009
gb|AV546641.1|AV546641 AV546641 Arabidopsis thaliana roots ... 68 5e-009
gb|BZ358530.1|BZ358530 SALK_132923.43.10.x Arabidopsis thal... 64 8e-008
gb|AV544321.1|AV544321 AV544321 Arabidopsis thaliana roots ... 64 8e-008
gb|BP595678.1|BP595678 BP595678 RAFL15 Arabidopsis thaliana... 64 8e-008
gb|BP787235.1|BP787235 BP787235 RAFL7 Arabidopsis thaliana ... 64 8e-008
gb|BP787373.1|BP787373 BP787373 RAFL7 Arabidopsis thaliana ... 64 8e-008
emb|CR381175.1| Arabidopsis thaliana transposon insertion S... 64 8e-008
gb|BP671953.1|BP671953 BP671953 RAFL21 Arabidopsis thaliana... 62 3e-007
gb|BP783214.1|BP783214 BP783214 RAFL7 Arabidopsis thaliana ... 62 3e-007
gb|H76192.1|H76192 17897 Lambda-PRL2 Arabidopsis thaliana c... 60 1e-006
gb|BP668598.1|BP668598 BP668598 RAFL21 Arabidopsis thaliana... 60 1e-006
gb|CL477480.1|CL477480 SAIL_274_A01.v1 SAIL Collection Arab... 58 5e-006
gb|AI992876.1|AI992876 701493846 A. thaliana, Ohio State cl... 58 5e-006
gb|BP801575.1|BP801575 BP801575 RAFL14 Arabidopsis thaliana... 58 5e-006
gb|R30458.1|R30458 13063 Lambda-PRL2 Arabidopsis thaliana c... 56 2e-005
gb|AV794173.1|AV794173 AV794173 RAFL8 Arabidopsis thaliana ... 56 2e-005
gb|AV805037.1|AV805037 AV805037 RAFL9 Arabidopsis thaliana ... 56 2e-005
gb|BP664920.1|BP664920 BP664920 RAFL21 Arabidopsis thaliana... 56 2e-005
gb|BP805075.1|BP805075 BP805075 RAFL16 Arabidopsis thaliana... 56 2e-005
gb|BE528498.1|BE528498 M79N03STM Arabidopsis developing see... 54 8e-005
gb|F20032.1|F20032 ATTS6071 AC16H Arabidopsis thaliana cDNA... 54 8e-005
gb|AV785973.1|AV785973 AV785973 RAFL6 Arabidopsis thaliana ... 52 3e-004
gb|AV794879.1|AV794879 AV794879 RAFL8 Arabidopsis thaliana ... 52 3e-004
gb|BP571980.1|BP571980 BP571980 RAFL14 Arabidopsis thaliana... 52 3e-004
gb|BP589773.1|BP589773 BP589773 RAFL15 Arabidopsis thaliana... 52 3e-004
gb|BP620954.1|BP620954 BP620954 RAFL16 Arabidopsis thaliana... 52 3e-004
gb|BP625703.1|BP625703 BP625703 RAFL17 Arabidopsis thaliana... 52 3e-004
gb|BP781067.1|BP781067 BP781067 RAFL7 Arabidopsis thaliana ... 52 3e-004
gb|AA067437.1|AA067437 26282 Lambda-PRL2 Arabidopsis thalia... 50 0.001
gb|T43233.1|T43233 6496 Lambda-PRL2 Arabidopsis thaliana cD... 50 0.001
gb|CA963966.1|CA963966 cATI008A10AF Infected Arabidopsis Le... 50 0.001
gb|BP566081.1|BP566081 BP566081 RAFL14 Arabidopsis thaliana... 48 0.005
gb|BP665864.1|BP665864 BP665864 RAFL21 Arabidopsis thaliana... 48 0.005
gb|BP847945.1|BP847945 BP847945 RAFL21 Arabidopsis thaliana... 48 0.005
gb|B22771.1|B22771 F22A1TR IGF Arabidopsis thaliana genomic... 46 0.019
gb|AI999092.1|AI999092 701554435 A. thaliana, Columbia Col-... 46 0.019
gb|AV807401.1|AV807401 AV807401 RAFL9 Arabidopsis thaliana ... 46 0.019
gb|BP624922.1|BP624922 BP624922 RAFL17 Arabidopsis thaliana... 46 0.019
gb|B22558.1|B22558 F20H6TF IGF Arabidopsis thaliana genomic... 44 0.075
gb|C99756.1|C99756 C99756 YAC clone CIC7E11 region-specific... 44 0.075
gb|AV798652.1|AV798652 AV798652 RAFL9 Arabidopsis thaliana ... 44 0.075
gb|BP612298.1|BP612298 BP612298 RAFL16 Arabidopsis thaliana... 42 0.30
>gb|AV524587.1|AV524587 AV524587 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD06d09R 5', mRNA
sequence
Length = 554
Score = 178 bits (90), Expect = 2e-042
Identities = 264/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 374 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 315
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 314 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 255
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 254 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 195
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 194 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 135
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||| |
Sbjct: 134 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 75
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 74 gtgtcaggcgcttcatctgctt 53
>gb|AY045655.1| Arabidopsis thaliana AT3g44110/F26G5_60 mRNA, complete cds
Length = 1692
Score = 178 bits (90), Expect = 2e-042
Identities = 264/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 1176 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1117
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 1116 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1057
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 1056 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 997
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 996 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 937
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||| |
Sbjct: 936 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 877
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 876 gtgtcaggcgcttcatctgctt 855
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 396 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 337
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 336 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 277
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 276 tctccacccttatcaggatgattcttgatagcggc 242
Score = 48.1 bits (24), Expect = 0.005
Identities = 105/132 (79%)
Strand = Plus / Minus
Query: 952 cacttcaagaactttcttctccggcacaactttatcacctttgcattgtgggcatctatc 1011
||||||||| || |||||||| || | || || || |||||||||||||| || || ||
Sbjct: 805 cacttcaagcaccttcttctcaggaatgaccttgtctcctttgcattgtggacacctgtc 746
Query: 1012 cttatcgctgatggtctctccagaacccttgcactcattgcaaggatgctgcatttgctg 1071
| ||| |||||||||| || | || ||||| ||||| || | ||||||||| |||||
Sbjct: 745 ccgatcattgatggtctcacctgtccctttgcattcattacatgcatgctgcatctgctg 686
Query: 1072 aatcattccagg 1083
|||||||||||
Sbjct: 685 gatcattccagg 674
>gb|AY035087.1| Arabidopsis thaliana putative dnaJ protein homolog atj3 (At3g44110)
mRNA, complete cds
Length = 1653
Score = 178 bits (90), Expect = 2e-042
Identities = 264/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 1159 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1100
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 1099 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1040
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 1039 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 980
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 979 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 920
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||| |
Sbjct: 919 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 860
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 859 gtgtcaggcgcttcatctgctt 838
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 379 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 320
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 319 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 260
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 259 tctccacccttatcaggatgattcttgatagcggc 225
Score = 50.1 bits (25), Expect = 0.001
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 911 aatgtgatcttctgcccgttctgcatacctttctcaactaccacttcaagaactttcttc 970
|||||||||||||| | || ||||| || ||||| || ||||||||| || ||||||
Sbjct: 829 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 770
Query: 971 tccggcacaactttatcacctttgcattgtgggcatctatccttatcgctgatggtctct 1030
|| || | || || || |||||||||||||| || || ||| ||| ||||||||||
Sbjct: 769 tcaggaatgaccttgtctcctttgcattgtggacacctgtcccgatcattgatggtctca 710
Query: 1031 ccagaacccttgcactcattgcaaggatgctgcatttgctgaatcattccagg 1083
|| | || ||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 709 cctgtccctttgcattcattacatgcatgctgcatctgctggatcattccagg 657
>gb|AY113878.1| Arabidopsis thaliana putative DnaJ-like protein atj3 (At3g44110)
mRNA, complete cds
Length = 1294
Score = 178 bits (90), Expect = 2e-042
Identities = 264/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 1043 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 984
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 983 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 924
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 923 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 864
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 863 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 804
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||| |
Sbjct: 803 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 744
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 743 gtgtcaggcgcttcatctgctt 722
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 263 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 204
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 203 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 144
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 143 tctccacccttatcaggatgattcttgatagcggc 109
Score = 50.1 bits (25), Expect = 0.001
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 911 aatgtgatcttctgcccgttctgcatacctttctcaactaccacttcaagaactttcttc 970
|||||||||||||| | || ||||| || ||||| || ||||||||| || ||||||
Sbjct: 713 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 654
Query: 971 tccggcacaactttatcacctttgcattgtgggcatctatccttatcgctgatggtctct 1030
|| || | || || || |||||||||||||| || || ||| ||| ||||||||||
Sbjct: 653 tcaggaatgaccttgtctcctttgcattgtggacacctgtcccgatcattgatggtctca 594
Query: 1031 ccagaacccttgcactcattgcaaggatgctgcatttgctgaatcattccagg 1083
|| | || ||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 593 cctgtccctttgcattcattacatgcatgctgcatctgctggatcattccagg 541
>emb|AX506322.1| Sequence 1017 from Patent WO0216655
Length = 1263
Score = 178 bits (90), Expect = 2e-042
Identities = 264/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 1043 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 984
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 983 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 924
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 923 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 864
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 863 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 804
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||| |
Sbjct: 803 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 744
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 743 gtgtcaggcgcttcatctgctt 722
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 263 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 204
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 203 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 144
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 143 tctccacccttatcaggatgattcttgatagcggc 109
Score = 50.1 bits (25), Expect = 0.001
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 911 aatgtgatcttctgcccgttctgcatacctttctcaactaccacttcaagaactttcttc 970
|||||||||||||| | || ||||| || ||||| || ||||||||| || ||||||
Sbjct: 713 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 654
Query: 971 tccggcacaactttatcacctttgcattgtgggcatctatccttatcgctgatggtctct 1030
|| || | || || || |||||||||||||| || || ||| ||| ||||||||||
Sbjct: 653 tcaggaatgaccttgtctcctttgcattgtggacacctgtcccgatcattgatggtctca 594
Query: 1031 ccagaacccttgcactcattgcaaggatgctgcatttgctgaatcattccagg 1083
|| | || ||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 593 cctgtccctttgcattcattacatgcatgctgcatctgctggatcattccagg 541
>ref|NM_114279.2| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3) transcript variant
AT3G44110.1 mRNA, complete cds
Length = 1746
Score = 178 bits (90), Expect = 2e-042
Identities = 264/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 1205 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1146
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 1145 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1086
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 1085 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 1026
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 1025 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 966
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||| |
Sbjct: 965 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 906
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 905 gtgtcaggcgcttcatctgctt 884
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 425 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 366
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 365 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 306
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 305 tctccacccttatcaggatgattcttgatagcggc 271
Score = 50.1 bits (25), Expect = 0.001
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 911 aatgtgatcttctgcccgttctgcatacctttctcaactaccacttcaagaactttcttc 970
|||||||||||||| | || ||||| || ||||| || ||||||||| || ||||||
Sbjct: 875 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 816
Query: 971 tccggcacaactttatcacctttgcattgtgggcatctatccttatcgctgatggtctct 1030
|| || | || || || |||||||||||||| || || ||| ||| ||||||||||
Sbjct: 815 tcaggaatgaccttgtctcctttgcattgtggacacctgtcccgatcattgatggtctca 756
Query: 1031 ccagaacccttgcactcattgcaaggatgctgcatttgctgaatcattccagg 1083
|| | || ||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 755 cctgtccctttgcattcattacatgcatgctgcatctgctggatcattccagg 703
>gb|CB259915.1|CB259915 13-E9624-013-004-J03-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770J034Q 5-PRIME, mRNA sequence
Length = 574
Score = 170 bits (86), Expect = 5e-040
Identities = 263/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 496 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 437
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 436 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 377
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 376 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 317
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 316 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 257
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
|||||||||||||| || ||||| |||||||| || ||||| | ||||||||||| |
Sbjct: 256 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtaaca 197
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 196 gtgtcaggcgcttcatctgctt 175
>gb|U22340.1|ATU22340 Arabidopsis thaliana DnaJ homolog (atj) mRNA, complete cds
Length = 1642
Score = 170 bits (86), Expect = 5e-040
Identities = 263/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 1142 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 1083
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 1082 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1023
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 1022 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 963
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 962 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 903
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
||||||||||||| || ||||| |||||||| || ||||| | |||||||||||| |
Sbjct: 902 tttctcttgaactgtgggtgctctttctgctgaaggacaaacactatatctccagtgaca 843
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 842 gtgtcaggcgcttcatctgctt 821
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 362 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 303
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 302 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 243
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 242 tctccacccttatcaggatgattcttgatagcggc 208
Score = 50.1 bits (25), Expect = 0.001
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 911 aatgtgatcttctgcccgttctgcatacctttctcaactaccacttcaagaactttcttc 970
|||||||||||||| | || ||||| || ||||| || ||||||||| || ||||||
Sbjct: 812 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 753
Query: 971 tccggcacaactttatcacctttgcattgtgggcatctatccttatcgctgatggtctct 1030
|| || | || || || |||||||||||||| || || ||| ||| ||||||||||
Sbjct: 752 tcaggaatgaccttgtctcctttgcattgtggacacctgtcccgatcattgatggtctca 693
Query: 1031 ccagaacccttgcactcattgcaaggatgctgcatttgctgaatcattccagg 1083
|| | || ||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 692 cctgtccctttgcattcattacatgcatgctgcatctgctggatcattccagg 640
>gb|AY088078.1| Arabidopsis thaliana clone 40976 mRNA, complete sequence
Length = 1595
Score = 170 bits (86), Expect = 5e-040
Identities = 263/322 (81%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| || ||||||||
Sbjct: 1185 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacctttcatgaat 1126
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 1125 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 1066
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 1065 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 1006
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 1005 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 946
Query: 788 tttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtggta 847
|||||||||||||| || ||||| |||||||| || ||||| | |||||||||||| |
Sbjct: 945 tttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctccagtgaca 886
Query: 848 gtatcaggtgcttcatcagctt 869
|| ||||| |||||||| ||||
Sbjct: 885 gtgtcaggcgcttcatctgctt 864
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 405 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 346
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 345 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 286
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 285 tctccacccttatcaggatgattcttgatagcggc 251
Score = 50.1 bits (25), Expect = 0.001
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 911 aatgtgatcttctgcccgttctgcatacctttctcaactaccacttcaagaactttcttc 970
|||||||||||||| | || ||||| || ||||| || ||||||||| || ||||||
Sbjct: 855 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 796
Query: 971 tccggcacaactttatcacctttgcattgtgggcatctatccttatcgctgatggtctct 1030
|| || | || || || |||||||||||||| || || ||| ||| ||||||||||
Sbjct: 795 tcaggaatgaccttgtctcctttgcattgtggacacctgtcccgatcattgatggtctca 736
Query: 1031 ccagaacccttgcactcattgcaaggatgctgcatttgctgaatcattccagg 1083
|| | || ||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 735 cctgtccctttgcattcattacatgcatgctgcatctgctggatcattccagg 683
>gb|AV785278.1|AV785278 AV785278 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-13-M23 3',
mRNA sequence
Length = 697
Score = 155 bits (78), Expect = 3e-035
Identities = 222/270 (82%)
Strand = Plus / Plus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 428 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 487
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 488 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 547
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 548 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 607
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 608 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 667
Query: 788 tttctcttgaacttgggatgctccttctgc 817
|||||||||||||| || ||||| ||||||
Sbjct: 668 tttctcttgaactttgggtgctctttctgc 697
>gb|U64912.1|ATU64912 Arabidopsis thaliana farnesylated protein ATFP9 mRNA, partial cds
Length = 270
Score = 147 bits (74), Expect = 7e-033
Identities = 209/254 (82%)
Strand = Plus / Minus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 260 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 201
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 200 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 141
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 140 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 81
Query: 728 tggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgccc 787
||||||||||||| || ||| || | | ||||||||||| |||||||| || |||
Sbjct: 80 tggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctccc 21
Query: 788 tttctcttgaactt 801
||||||||||||||
Sbjct: 20 tttctcttgaactt 7
>gb|AV785374.1|AV785374 AV785374 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-15-L15 3',
mRNA sequence
Length = 695
Score = 137 bits (69), Expect = 7e-030
Identities = 162/193 (83%)
Strand = Plus / Plus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 484 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 543
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 544 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 603
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 604 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 663
Query: 728 tggaagccacaca 740
|||||||||||||
Sbjct: 664 tggaagccacaca 676
>gb|AV542282.1|AV542282 AV542282 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ181e08F 3', mRNA sequence
Length = 628
Score = 137 bits (69), Expect = 7e-030
Identities = 162/193 (83%)
Strand = Plus / Plus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 410 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 469
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 470 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 529
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 530 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 589
Query: 728 tggaagccacaca 740
|||||||||||||
Sbjct: 590 tggaagccacaca 602
>ref|NM_180322.1| Arabidopsis thaliana ATJ3 AT3G44110 (ATJ3) transcript variant
AT3G44110.2 mRNA, complete cds
Length = 1579
Score = 129 bits (65), Expect = 2e-027
Identities = 221/273 (80%)
Strand = Plus / Minus
Query: 597 ccttcatgaagggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaat 656
|||||||||| |||||||| || || ||||| ||||||||| | ||||||||| | ||||
Sbjct: 1156 ccttcatgaatggcctctggtatatcggcattccttcatcgcttattgccttgtatgaat 1097
Query: 657 caggcttcacaacttcaccagggttcgatttgatcagcagctgcctgttatccaagtgag 716
|||| ||||| || || ||||| || ||||| || || || ||| |||||||||||
Sbjct: 1096 caggtttcacgacctccccaggattagatttaatgagaagacttctgccatccaagtgag 1037
Query: 717 tcagaacaaactggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaaga 776
|||||||||| ||||||||||||| || ||| || | | ||||||||||| ||||
Sbjct: 1036 tcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaaga 977
Query: 777 ggtcatcgccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatat 836
|||| || ||||||||||||||||| || ||||| |||||||| || ||||| | ||||
Sbjct: 976 ggtcttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatat 917
Query: 837 ctccagtggtagtatcaggtgcttcatcagctt 869
|||||||| ||| ||||| |||||||| ||||
Sbjct: 916 ctccagtgacagtgtcaggcgcttcatctgctt 884
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 425 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 366
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 365 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 306
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 305 tctccacccttatcaggatgattcttgatagcggc 271
Score = 50.1 bits (25), Expect = 0.001
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 911 aatgtgatcttctgcccgttctgcatacctttctcaactaccacttcaagaactttcttc 970
|||||||||||||| | || ||||| || ||||| || ||||||||| || ||||||
Sbjct: 875 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 816
Query: 971 tccggcacaactttatcacctttgcattgtgggcatctatccttatcgctgatggtctct 1030
|| || | || || || |||||||||||||| || || ||| ||| ||||||||||
Sbjct: 815 tcaggaatgaccttgtctcctttgcattgtggacacctgtcccgatcattgatggtctca 756
Query: 1031 ccagaacccttgcactcattgcaaggatgctgcatttgctgaatcattccagg 1083
|| | || ||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 755 cctgtccctttgcattcattacatgcatgctgcatctgctggatcattccagg 703
>gb|AV531399.1|AV531399 AV531399 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB021b03F 3', mRNA sequence
Length = 573
Score = 125 bits (63), Expect = 3e-026
Identities = 156/187 (83%)
Strand = Plus / Plus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 387 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 446
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 447 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 506
Query: 668 acttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaac 727
|| || ||||| || ||||| || || || ||| |||||||||||||||||||||
Sbjct: 507 acctccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaat 566
Query: 728 tggaagc 734
|||||||
Sbjct: 567 tggaagc 573
>gb|BU636099.1|BU636099 045E06 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 735
Score = 123 bits (62), Expect = 1e-025
Identities = 218/270 (80%)
Strand = Plus / Minus
Query: 600 tcatgaagggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcag 659
||||||| |||||||| || || ||||| ||||||||| | ||||||||| | |||||||
Sbjct: 656 tcatgaatggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcag 597
Query: 660 gcttcacaacttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtca 719
| ||||| || || ||||| || ||||| || || || ||| ||||||||||||||
Sbjct: 596 gtttcacgacctccccaggattagatttaatgagaagacttctgccatccaagtgagtca 537
Query: 720 gaacaaactggaagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggt 779
||||||| ||||||||||||| || ||| || | | ||||||||||| |||||||
Sbjct: 536 gaacaaattggaagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggt 477
Query: 780 catcgccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctc 839
| || ||||||||||||||||| || ||||| |||||||| || ||||| | |||||||
Sbjct: 476 cttctccctttctcttgaactttgggtgctctttctgctgaaggacaaacactatatctc 417
Query: 840 cagtggtagtatcaggtgcttcatcagctt 869
||||| ||| ||||| |||||||| ||||
Sbjct: 416 cagtgacagtgtcaggcgcttcatctgctt 387
Score = 50.1 bits (25), Expect = 0.001
Identities = 136/173 (78%)
Strand = Plus / Minus
Query: 911 aatgtgatcttctgcccgttctgcatacctttctcaactaccacttcaagaactttcttc 970
|||||||||||||| | || ||||| || ||||| || ||||||||| || ||||||
Sbjct: 378 aatgtgatcttctgactgtgttgcattcccttctccacattcacttcaagcaccttcttc 319
Query: 971 tccggcacaactttatcacctttgcattgtgggcatctatccttatcgctgatggtctct 1030
|| || | || || || |||||||||||||| || || ||| ||| ||||||||||
Sbjct: 318 tcaggaatgaccttgtctcctttgcattgtggacacctgtcccgatcattgatggtctca 259
Query: 1031 ccagaacccttgcactcattgcaaggatgctgcatttgctgaatcattccagg 1083
|| | || ||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 258 cctgtccctttgcattcattacatgcatgctgcatctgctggatcattccagg 206
>gb|CD533115.1|CD533115 30C8 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 315
Score = 113 bits (57), Expect = 1e-022
Identities = 212/260 (81%), Gaps = 3/260 (1%)
Strand = Plus / Minus
Query: 554 aacgagtccgggaactccacc-gaaaagtg-aatgtacagcttgcccttcatgaagggcc 611
|||||||||||||||||||| | ||||| |||||| ||||| ||||||||||| ||||
Sbjct: 264 aacgagtccgggaactccacntgtgaagtggaatgtagagcttacccttcatgaatggcc 205
Query: 612 tctgatacatgggcatgccttcatcg-ttgattgccttgaaagaatcaggcttcacaact 670
|||| || || ||||| ||||||||| || ||||||||| | |||||||| ||||| ||
Sbjct: 204 tctggtatatcggcattccttcatcgcttaattgccttgtatgaatcaggtttcacgacc 145
Query: 671 tcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaacaaactgg 730
|| ||||| || ||||| || || || ||| ||||||||||||||||||||| |||
Sbjct: 144 tccccaggattagatttaatgagaagacttctgccatccaagtgagtcagaacaaattgg 85
Query: 731 aagccacacagagattcagtcaaggtcagtgtgtgctcgtagaagaggtcatcgcccttt 790
|||||||||| || ||| || | | ||||||||||| |||||||| || ||||||
Sbjct: 84 aagccacacaaagcttcggttagagaaagtgtgtgctccacaaagaggtcttctcccttt 25
Query: 791 ctcttgaacttgggatgctc 810
||||||||||| || |||||
Sbjct: 24 ctcttgaactttgggtgctc 5
>gb|AV562719.1|AV562719 AV562719 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ174h06F 3', mRNA sequence
Length = 581
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 548 gggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatgaag 607
|||||||||||||||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct: 410 gggctcaacgagtccgggaactccactgtgaagtggatgtagagcttacccttcatgaat 469
Query: 608 ggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttcaca 667
|||||||| || || ||||| ||||||||| | ||||||||| | |||||||| |||||
Sbjct: 470 ggcctctggtatatcggcattccttcatcgcttattgccttgtatgaatcaggtttcacg 529
Query: 668 acttcaccagggttcgattt 687
|| || ||||| || |||||
Sbjct: 530 acctccccaggattagattt 549
>gb|CB258912.1|CB258912 09-E011082-014-003-B03-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771B033Q 5-PRIME, mRNA sequence
Length = 513
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 336 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 277
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 276 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 217
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 216 tctccacccttatcaggatgattcttgatagcggc 182
>gb|AV526975.1|AV526975 AV526975 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZ25e12R 5', mRNA
sequence
Length = 447
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 374 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 315
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 314 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 255
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 254 tctccacccttatcaggatgattcttgatagcggc 220
>gb|AV524937.2|AV524937 AV524937 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APD13c02R 5', mRNA
sequence
Length = 569
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 355 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 296
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 295 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 236
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 235 tctccacccttatcaggatgattcttgatagcggc 201
>gb|CK119390.1|CK119390 201l01.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L01201
5-PRIME, mRNA sequence
Length = 761
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 351 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 292
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 291 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 232
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 231 tctccacccttatcaggatgattcttgatagcggc 197
Score = 46.1 bits (23), Expect = 0.019
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 989 cctttgcattgtgggcatctatccttatcgctgatggtctctccagaacccttgcactca 1048
|||||||||||||| || || ||| ||| |||||||||| || | || ||||| |||
Sbjct: 723 cctttgcattgtggacacctgtcccgatcattgatggtctcacctgtccctttgcattca 664
Query: 1049 ttgcaaggatgctgcatttgctgaatcattccagg 1083
|| || | ||||||||| ||||| |||||||||||
Sbjct: 663 ttacatgcatgctgcatctgctggatcattccagg 629
>gb|BP561192.1|BP561192 BP561192 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-15-L15 5', mRNA
sequence
Length = 662
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 461 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 402
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 401 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 342
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 341 tctccacccttatcaggatgattcttgatagcggc 307
>gb|BP561520.2|BP561520 BP561520 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-08-D21 5', mRNA
sequence
Length = 539
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 398 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 339
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 338 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 279
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 278 tctccacccttatcaggatgattcttgatagcggc 244
>gb|BP812305.1|BP812305 BP812305 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-03-A01 5',
mRNA sequence
Length = 394
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 359 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 300
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 299 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 240
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 239 tctccacccttatcaggatgattcttgatagcggc 205
>gb|BP819333.1|BP819333 BP819333 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-50-P03 5',
mRNA sequence
Length = 406
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 361 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 302
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 301 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 242
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 241 tctccacccttatcaggatgattcttgatagcggc 207
>gb|BP821075.1|BP821075 BP821075 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-56-L10 5',
mRNA sequence
Length = 394
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 394 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 335
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 334 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 275
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 274 tctccacccttatcaggatgattcttgatagcggc 240
>gb|BP825757.1|BP825757 BP825757 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-69-K06 5',
mRNA sequence
Length = 377
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 359 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 300
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 299 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 240
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 239 tctccacccttatcaggatgattcttgatagcggc 205
>gb|BP831553.1|BP831553 BP831553 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-89-G03 5',
mRNA sequence
Length = 404
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 394 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 335
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 334 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 275
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 274 tctccacccttatcaggatgattcttgatagcggc 240
>gb|BP835283.1|BP835283 BP835283 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-12-O12 5',
mRNA sequence
Length = 401
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 360 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 301
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 300 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 241
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 240 tctccacccttatcaggatgattcttgatagcggc 206
>gb|BP851282.1|BP851282 BP851282 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-15-N24 5',
mRNA sequence
Length = 401
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 365 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 306
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 305 cgcttctccgggtcactaagcacttcataagcttgtgctaactcctttaacttctcggga 246
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 245 tctccacccttatcaggatgattcttgatagcggc 211
>gb|BP865904.1|BP865904 BP865904 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-75-N20 5',
mRNA sequence
Length = 378
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 365 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 306
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 305 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 246
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 245 tctccacccttatcaggatgattcttgatagcggc 211
>gb|BP867654.1|BP867654 BP867654 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-81-M07 5',
mRNA sequence
Length = 413
Score = 109 bits (55), Expect = 2e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 1367 cctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctct 1426
||||| ||||| |||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct: 389 cctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctca 330
Query: 1427 cgcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcggga 1486
||||| || || ||||| || || |||||||| || |||| |||||| ||||||||||||
Sbjct: 329 cgcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcggga 270
Query: 1487 tcgccgcccttgtcggggtggttcttgatggcggc 1521
|| || ||||| || || || |||||||| |||||
Sbjct: 269 tctccacccttatcaggatgattcttgatagcggc 235
>gb|BP820936.1|BP820936 BP820936 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-56-D17 5',
mRNA sequence
Length = 392
Score = 107 bits (54), Expect = 6e-021
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 1368 ctccaccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctc 1427
|||| ||||| |||||||| |||||||| |||||||| ||||| || ||||||||||| |
Sbjct: 392 ctcctccaccacccattccttccttgagtgcatcctctccatactggtcataaatctcac 333
Query: 1428 gcttttcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggat 1487
|||| || || ||||| || || |||||||| || |||| |||||| |||||||||||||
Sbjct: 332 gcttctccgggtcactaagcacttcataagcttgtgctaactccttaaacttctcgggat 273
Query: 1488 cgccgcccttgtcggggtggttcttgatggcggc 1521
| || ||||| || || || |||||||| |||||
Sbjct: 272 ctccacccttatcaggatgattcttgatagcggc 239
>gb|AV824391.1|AV824391 AV824391 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-69-C20 5', mRNA
sequence
Length = 476
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 386 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 327
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 326 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 267
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 266 cccttatcaggatggtttttgatagcggc 238
>gb|AU239248.1|AU239248 AU239248 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-64-P10 5',
mRNA sequence
Length = 650
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 332 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 273
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 272 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 213
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 212 cccttatcaggatggtttttgatagcggc 184
Score = 52.0 bits (26), Expect = 3e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1141 tgaagctccagactttgaacccttaccattgcacttggagca 1182
|||||||||||||||||||||||| || || ||||| |||||
Sbjct: 561 tgaagctccagactttgaacccttgccgttacactttgagca 520
>gb|AV550422.1|AV550422 AV550422 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ112c07R 5', mRNA sequence
Length = 464
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 305 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 246
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 245 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 186
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 185 cccttatcaggatggtttttgatagcggc 157
>gb|BP820203.1|BP820203 BP820203 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-53-M10 5',
mRNA sequence
Length = 395
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 331 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 272
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 271 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 212
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 211 cccttatcaggatggtttttgatagcggc 183
>gb|BP820336.1|BP820336 BP820336 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-54-D12 5',
mRNA sequence
Length = 387
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 331 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 272
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 271 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 212
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 211 cccttatcaggatggtttttgatagcggc 183
>gb|BP847929.1|BP847929 BP847929 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-K01 5',
mRNA sequence
Length = 383
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 312 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 253
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 252 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 193
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 192 cccttatcaggatggtttttgatagcggc 164
>gb|BP853093.1|BP853093 BP853093 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-22-B19 5',
mRNA sequence
Length = 381
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 337 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 278
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 277 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 218
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 217 cccttatcaggatggtttttgatagcggc 189
>gb|BP855038.1|BP855038 BP855038 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-25-E20 5',
mRNA sequence
Length = 369
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 337 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 278
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 277 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 218
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 217 cccttatcaggatggtttttgatagcggc 189
>gb|BP855559.1|BP855559 BP855559 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-27-A16 5',
mRNA sequence
Length = 410
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 386 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 327
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 326 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 267
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 266 cccttatcaggatggtttttgatagcggc 238
>gb|BP859641.1|BP859641 BP859641 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-41-F20 5',
mRNA sequence
Length = 391
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 385 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 326
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 325 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 266
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 265 cccttatcaggatggtttttgatagcggc 237
>gb|BP865537.1|BP865537 BP865537 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-74-I20 5',
mRNA sequence
Length = 376
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 337 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 278
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 277 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 218
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 217 cccttatcaggatggtttttgatagcggc 189
>gb|L36113.1|ATHATJ Arabidopsis thaliana chaperone protein (atj) mRNA, complete cds
Length = 1443
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 320 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 261
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 260 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 201
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 200 cccttatcaggatggtttttgatagcggc 172
Score = 79.8 bits (40), Expect = 1e-012
Identities = 157/196 (80%)
Strand = Plus / Minus
Query: 545 tccgggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatg 604
|||||||||| ||| |||||||| || |||| ||||||||||| ||||| |||||||||
Sbjct: 1112 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1053
Query: 605 aagggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttc 664
|| || || || || || ||||| || ||||| | || |||||| | |||||||| ||
Sbjct: 1052 aacggactttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 993
Query: 665 acaacttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaaca 724
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 992 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 933
Query: 725 aactggaagccacaca 740
||||||||||||||||
Sbjct: 932 aactggaagccacaca 917
Score = 67.9 bits (34), Expect = 5e-009
Identities = 181/230 (78%)
Strand = Plus / Minus
Query: 953 acttcaagaactttcttctccggcacaactttatcacctttgcattgtgggcatctatcc 1012
|||||||| || |||||||| | ||||| || || |||||||||||||| || || |||
Sbjct: 737 acttcaagcaccttcttctcagagacaaccttctctcctttgcattgtggacacctgtcc 678
Query: 1013 ttatcgctgatggtctctccagaacccttgcactcattgcaaggatgctgcatttgctga 1072
||| ||||||||||||| | || ||| | ||||| |||| |||||||| |||||
Sbjct: 677 cgatcattgatggtctctcctgtgcctttggaatcattacaagcatgctgcacctgctgc 618
Query: 1073 atcattccaggccccaactgccggatttggaccttaaagccagaaccttggcaaccagca 1132
||||||||||| || ||||||| ||| || ||| | || || ||||| || ||| ||
Sbjct: 617 atcattccaggtccaaactgcctgatcgagatcttcattcccgagccttgacagccacca 558
Query: 1133 cacctcgatgaagctccagactttgaacccttaccattgcacttggagca 1182
|| || |||||||||||||||||||||||| || || ||||| |||||
Sbjct: 557 catttcagtgaagctccagactttgaacccttgccgttacactttgagca 508
Score = 58.0 bits (29), Expect = 5e-006
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 785 ccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtg 844
|||||||| |||||||| || |||||||||||||| | ||||| | |||||||| |||
Sbjct: 872 ccctttcttttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtg 813
Query: 845 gtagtatcaggtgcttcatcagctt 869
||||||||| |||||||| ||||
Sbjct: 812 acagtatcaggcgcttcatcggctt 788
>emb|BX831588.1|CNS0A0V0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH17ZB05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1489
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 350 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 291
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 290 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 231
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 230 cccttatcaggatggtttttgatagcggc 202
Score = 87.7 bits (44), Expect = 6e-015
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 545 tccgggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatg 604
|||||||||| ||| |||||||| || |||| ||||||||||| ||||| |||||||||
Sbjct: 1142 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1083
Query: 605 aagggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttc 664
|| ||||| || || || ||||| || ||||| | || |||||| | |||||||| ||
Sbjct: 1082 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 1023
Query: 665 acaacttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaaca 724
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 1022 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 963
Query: 725 aactggaagccacaca 740
||||||||||||||||
Sbjct: 962 aactggaagccacaca 947
Score = 83.8 bits (42), Expect = 9e-014
Identities = 183/230 (79%)
Strand = Plus / Minus
Query: 953 acttcaagaactttcttctccggcacaactttatcacctttgcattgtgggcatctatcc 1012
|||||||| || |||||||| | ||||| || || |||||||||||||| || || |||
Sbjct: 767 acttcaagcaccttcttctcagagacaaccttctctcctttgcattgtggacacctgtcc 708
Query: 1013 ttatcgctgatggtctctccagaacccttgcactcattgcaaggatgctgcatttgctga 1072
||| ||||||||||||| | || ||||| ||||| |||| |||||||| |||||
Sbjct: 707 cgatcattgatggtctctcctgtgcctttgcaatcattacaagcatgctgcacctgctgc 648
Query: 1073 atcattccaggccccaactgccggatttggaccttaaagccagaaccttggcaaccagca 1132
||||||||||| || ||||||| ||| || ||| | || |||||||| || ||| ||
Sbjct: 647 atcattccaggtccaaactgcctgatcgagatcttcattcccgaaccttgacagccacca 588
Query: 1133 cacctcgatgaagctccagactttgaacccttaccattgcacttggagca 1182
|| || |||||||||||||||||||||||| || || ||||| |||||
Sbjct: 587 catttcattgaagctccagactttgaacccttgccgttacactttgagca 538
Score = 58.0 bits (29), Expect = 5e-006
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 785 ccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtg 844
|||||||| |||||||| || |||||||||||||| | ||||| | |||||||| |||
Sbjct: 902 ccctttcttttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtg 843
Query: 845 gtagtatcaggtgcttcatcagctt 869
||||||||| |||||||| ||||
Sbjct: 842 acagtatcaggcgcttcatcggctt 818
>dbj|AK118386.1| Arabidopsis thaliana At5g22060 mRNA for putative DNAJ PROTEIN HOMOLOG
ATJ, complete cds, clone: RAFL19-64-P10
Length = 1451
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 332 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 273
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 272 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 213
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 212 cccttatcaggatggtttttgatagcggc 184
Score = 87.7 bits (44), Expect = 6e-015
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 545 tccgggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatg 604
|||||||||| ||| |||||||| || |||| ||||||||||| ||||| |||||||||
Sbjct: 1124 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1065
Query: 605 aagggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttc 664
|| ||||| || || || ||||| || ||||| | || |||||| | |||||||| ||
Sbjct: 1064 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 1005
Query: 665 acaacttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaaca 724
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 1004 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 945
Query: 725 aactggaagccacaca 740
||||||||||||||||
Sbjct: 944 aactggaagccacaca 929
Score = 75.8 bits (38), Expect = 2e-011
Identities = 182/230 (79%)
Strand = Plus / Minus
Query: 953 acttcaagaactttcttctccggcacaactttatcacctttgcattgtgggcatctatcc 1012
|||||||| || |||||||| | ||||| || || |||||||||||||| || || |||
Sbjct: 749 acttcaagcaccttcttctcagagacaaccttctctcctttgcattgtggacacctgtcc 690
Query: 1013 ttatcgctgatggtctctccagaacccttgcactcattgcaaggatgctgcatttgctga 1072
||| ||||||||||||| | || ||||| ||||| |||| |||||||| |||||
Sbjct: 689 cgatcattgatggtctctcctgtgcctttgcaatcattacaagcatgctgcacctgctgc 630
Query: 1073 atcattccaggccccaactgccggatttggaccttaaagccagaaccttggcaaccagca 1132
||||| ||||| || ||||||| ||| || ||| | || |||||||| || ||| ||
Sbjct: 629 atcatcccaggtccaaactgcctgatcgagatcttcattcccgaaccttgacagccacca 570
Query: 1133 cacctcgatgaagctccagactttgaacccttaccattgcacttggagca 1182
|| || |||||||||||||||||||||||| || || ||||| |||||
Sbjct: 569 catttcattgaagctccagactttgaacccttgccgttacactttgagca 520
Score = 58.0 bits (29), Expect = 5e-006
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 785 ccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtg 844
|||||||| |||||||| || |||||||||||||| | ||||| | |||||||| |||
Sbjct: 884 ccctttcttttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtg 825
Query: 845 gtagtatcaggtgcttcatcagctt 869
||||||||| |||||||| ||||
Sbjct: 824 acagtatcaggcgcttcatcggctt 800
>ref|NM_122127.2| Arabidopsis thaliana ATJ2 AT5G22060 (ATJ2) mRNA, complete cds
Length = 1565
Score = 105 bits (53), Expect = 2e-020
Identities = 125/149 (83%)
Strand = Plus / Minus
Query: 1373 ccacctcccattccctccttgagggcatcctcaccatattgatcataaatctctcgcttt 1432
||||| |||||||| |||||||| ||||| || |||||||||||||| ||||| |||||
Sbjct: 386 ccaccacccattccttccttgagtgcatcttccccatattgatcatagatctcacgcttc 327
Query: 1433 tcaggatcactgaggacctcataagcctgagctagctccttgaacttctcgggatcgccg 1492
||||||||||| | || ||||||||||| |||| ||| || ||||| |||||||| ||
Sbjct: 326 tcaggatcacttaaaacttcataagcctgtgctaactctttaaacttttcgggatcacca 267
Query: 1493 cccttgtcggggtggttcttgatggcggc 1521
||||| || || ||||| ||||| |||||
Sbjct: 266 cccttatcaggatggtttttgatagcggc 238
Score = 87.7 bits (44), Expect = 6e-015
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 545 tccgggctcaacgagtccgggaactccaccgaaaagtgaatgtacagcttgcccttcatg 604
|||||||||| ||| |||||||| || |||| ||||||||||| ||||| |||||||||
Sbjct: 1178 tccgggctcagcgattccgggaattcaaccgtgaagtgaatgtatagcttacccttcatg 1119
Query: 605 aagggcctctgatacatgggcatgccttcatcgttgattgccttgaaagaatcaggcttc 664
|| ||||| || || || ||||| || ||||| | || |||||| | |||||||| ||
Sbjct: 1118 aacggcctttggtatattggcattccctcatcacttatcgccttgtatgaatcaggtttg 1059
Query: 665 acaacttcaccagggttcgatttgatcagcagctgcctgttatccaagtgagtcagaaca 724
|| || || || || || |||||||| || ||||| || || ||||| || |||| |||
Sbjct: 1058 acgacctctccgggcttggatttgatgagaagctgtcttttgtccaaatgggtcaagaca 999
Query: 725 aactggaagccacaca 740
||||||||||||||||
Sbjct: 998 aactggaagccacaca 983
Score = 83.8 bits (42), Expect = 9e-014
Identities = 183/230 (79%)
Strand = Plus / Minus
Query: 953 acttcaagaactttcttctccggcacaactttatcacctttgcattgtgggcatctatcc 1012
|||||||| || |||||||| | ||||| || || |||||||||||||| || || |||
Sbjct: 803 acttcaagcaccttcttctcagagacaaccttctctcctttgcattgtggacacctgtcc 744
Query: 1013 ttatcgctgatggtctctccagaacccttgcactcattgcaaggatgctgcatttgctga 1072
||| ||||||||||||| | || ||||| ||||| |||| |||||||| |||||
Sbjct: 743 cgatcattgatggtctctcctgtgcctttgcaatcattacaagcatgctgcacctgctgc 684
Query: 1073 atcattccaggccccaactgccggatttggaccttaaagccagaaccttggcaaccagca 1132
||||||||||| || ||||||| ||| || ||| | || |||||||| || ||| ||
Sbjct: 683 atcattccaggtccaaactgcctgatcgagatcttcattcccgaaccttgacagccacca 624
Query: 1133 cacctcgatgaagctccagactttgaacccttaccattgcacttggagca 1182
|| || |||||||||||||||||||||||| || || ||||| |||||
Sbjct: 623 catttcattgaagctccagactttgaacccttgccgttacactttgagca 574
Score = 58.0 bits (29), Expect = 5e-006
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 785 ccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtg 844
|||||||| |||||||| || |||||||||||||| | ||||| | |||||||| |||
Sbjct: 938 ccctttcttttgaactttgggtgctccttctgctgaatgacaaacactatatctccggtg 879
Query: 845 gtagtatcaggtgcttcatcagctt 869
||||||||| |||||||| ||||
Sbjct: 878 acagtatcaggcgcttcatcggctt 854
>gb|BE526451.1|BE526451 M65D04STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600035110R1 5', mRNA sequence
Length = 261
Score = 103 bits (52), Expect = 9e-020
Identities = 136/164 (82%)
Strand = Plus / Minus
Query: 706 atccaagtgagtcagaacaaactggaagccacacagagattcagtcaaggtcagtgtgtg 765
||||||||||||||||||||| ||||||||||||| || ||| || | | ||||||||
Sbjct: 226 atccaagtgagtcagaacaaattggaagccacacaaagcttcggttagagaaagtgtgtg 167
Query: 766 ctcgtagaagaggtcatcgccctttctcttgaacttgggatgctccttctgctggagaac 825
||| |||||||| || ||||||||||||||||| || ||||| |||||||| || ||
Sbjct: 166 ctccacaaagaggtcttctccctttctcttgaactttgggtgctctttctgctgaaggac 107
Query: 826 aaagatgatatctccagtggtagtatcaggtgcttcatcagctt 869
||| | |||||||||||| ||| ||||| |||||||| ||||
Sbjct: 106 aaacactatatctccagtgacagtgtcaggcgcttcatctgctt 63
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 760,249
Number of Sequences: 1013581
Number of extensions: 760249
Number of successful extensions: 60009
Number of sequences better than 0.5: 132
Number of HSP's better than 0.5 without gapping: 128
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 58475
Number of HSP's gapped (non-prelim): 1518
length of query: 1629
length of database: 908,940,872
effective HSP length: 21
effective length of query: 1608
effective length of database: 887,655,671
effective search space: 1427350318968
effective search space used: 1427350318968
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)