BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.28
(3878 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNT... 170 1e-039
dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-g... 161 1e-036
emb|AX030942.1| Sequence 5 from Patent WO9800549 161 1e-036
gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R1... 161 1e-036
ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNT... 161 1e-036
dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-g... 153 3e-034
emb|AX030948.1| Sequence 11 from Patent WO9800549 153 3e-034
gb|CB255846.1|CB255846 17-E011665-027-006-B05-T7R MPIZ-ADIS... 141 1e-030
dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-g... 137 2e-029
emb|AX030938.1| Sequence 1 from Patent WO9800549 137 2e-029
gb|CB253730.1|CB253730 90-E010932-019-003-C24-T7R MPIZ-ADIS... 117 2e-023
gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synth... 117 2e-023
gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synth... 117 2e-023
gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA... 117 2e-023
emb|AX507835.1| Sequence 2530 from Patent WO0216655 117 2e-023
gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene... 117 2e-023
emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cD... 117 2e-023
ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM... 117 2e-023
ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNT... 117 2e-023
gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synth... 109 4e-021
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 109 4e-021
emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome ... 109 4e-021
ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNT... 109 4e-021
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 109 4e-021
gb|BE521782.1|BE521782 M21E12STM Arabidopsis developing see... 105 6e-020
dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosom... 105 6e-020
gb|AV823575.1|AV823575 AV823575 RAFL5 Arabidopsis thaliana ... 103 2e-019
gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synth... 103 2e-019
emb|AX505864.1| Sequence 559 from Patent WO0216655 103 2e-019
ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synt... 103 2e-019
gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8... 100 4e-018
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 100 4e-018
gb|B24204.1|B24204 F19F17TF IGF Arabidopsis thaliana genomi... 96 6e-017
gb|BH611908.1|BH611908 SALK_031874 Arabidopsis thaliana TDN... 96 6e-017
gb|CF651830.1|CF651830 17-L020525-066-003-B05-SP6P MPIZ-ADI... 96 6e-017
gb|BP824749.1|BP824749 BP824749 RAFL19 Arabidopsis thaliana... 96 6e-017
dbj|BD022675.1| Manipulation of cellulose and/or beta-1,4-g... 96 6e-017
emb|AX030941.1| Sequence 4 from Patent WO9800549 96 6e-017
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 96 6e-017
dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosom... 96 6e-017
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 96 6e-017
emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosom... 96 6e-017
dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose syn... 96 6e-017
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 96 6e-017
gb|AY136423.1| Arabidopsis thaliana cellulose synthase cata... 92 9e-016
dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-g... 92 9e-016
emb|AX030944.1| Sequence 7 from Patent WO9800549 92 9e-016
gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complet... 92 9e-016
emb|AL758408.1| Arabidopsis thaliana T-DNA flanking sequenc... 90 3e-015
gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State cl... 90 3e-015
gb|AV536569.1|AV536569 AV536569 Arabidopsis thaliana liquid... 90 3e-015
gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synth... 90 3e-015
gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, ... 90 3e-015
dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-g... 90 3e-015
gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, ... 90 3e-015
emb|AX030946.1| Sequence 9 from Patent WO9800549 90 3e-015
gb|BT002335.1| Arabidopsis thaliana clone C104938 putative ... 90 3e-015
dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosom... 90 3e-015
ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNT... 90 3e-015
gb|BP831231.1|BP831231 BP831231 RAFL19 Arabidopsis thaliana... 88 1e-014
gb|BP832279.1|BP832279 BP832279 RAFL19 Arabidopsis thaliana... 88 1e-014
gb|H36425.1|H36425 14093 Lambda-PRL2 Arabidopsis thaliana c... 84 2e-013
gb|AI999519.1|AI999519 701556274 A. thaliana, Columbia Col-... 84 2e-013
gb|AV822205.1|AV822205 AV822205 RAFL5 Arabidopsis thaliana ... 84 2e-013
gb|BU635836.1|BU635836 039C03 Infected Arabidopsis Leaf Ara... 84 2e-013
gb|AV525753.1|AV525753 AV525753 Arabidopsis thaliana aboveg... 84 2e-013
gb|AV527222.1|AV527222 AV527222 Arabidopsis thaliana aboveg... 84 2e-013
gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synth... 84 2e-013
gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX... 84 2e-013
ref|NM_128111.2| Arabidopsis thaliana CESA10 (CELLULASE SYN... 82 8e-013
gb|N96707.1|N96707 21510 CD4-15 Arabidopsis thaliana cDNA c... 80 3e-012
gb|AY059858.1| Arabidopsis thaliana cellulose synthase cata... 80 3e-012
gb|AY093308.1| Arabidopsis thaliana cellulose synthase cata... 80 3e-012
gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R5... 80 3e-012
gb|BT006111.1| Arabidopsis thaliana clone U50150 putative c... 80 3e-012
ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNT... 80 3e-012
gb|CB074343.1|CB074343 EST00858 Virulent Peronospora parasi... 76 5e-011
gb|BP819896.1|BP819896 BP819896 RAFL19 Arabidopsis thaliana... 74 2e-010
gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synth... 74 2e-010
dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-g... 74 2e-010
emb|AX030940.1| Sequence 3 from Patent WO9800549 74 2e-010
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 74 2e-010
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 74 2e-010
emb|AL771826.1| Arabidopsis thaliana T-DNA flanking sequenc... 72 8e-010
gb|AV552509.1|AV552509 AV552509 Arabidopsis thaliana roots ... 72 8e-010
gb|BP837495.1|BP837495 BP837495 RAFL19 Arabidopsis thaliana... 72 8e-010
gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like... 72 8e-010
emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome... 72 8e-010
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 72 8e-010
ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNT... 72 8e-010
gb|N96884.1|N96884 21830 Lambda-PRL1 Arabidopsis thaliana c... 66 5e-008
gb|AV553463.1|AV553463 AV553463 Arabidopsis thaliana roots ... 66 5e-008
emb|BX546656.1| Arabidopsis thaliana T-DNA flanking sequenc... 62 8e-007
gb|N96792.1|N96792 21978 Lambda-PRL1 Arabidopsis thaliana c... 62 8e-007
gb|CB261308.1|CB261308 08-E9409-012-002-P13-t7r MPIZ-ADIS-0... 62 8e-007
gb|CD534481.1|CD534481 39I11 Arabidopsis Leaf Senescence Li... 62 8e-007
gb|AV550172.1|AV550172 AV550172 Arabidopsis thaliana roots ... 62 8e-007
gb|CK121679.1|CK121679 202d06.p1 AtM1 Arabidopsis thaliana ... 62 8e-007
emb|AJ838254.1| Arabidopsis thaliana T-DNA flanking sequenc... 62 8e-007
emb|BX572207.1| Arabidopsis thaliana T-DNA flanking sequenc... 60 3e-006
gb|T20516.1|T20516 2524 Lambda-PRL2 Arabidopsis thaliana cD... 60 3e-006
gb|AV782576.1|AV782576 AV782576 RAFL4 Arabidopsis thaliana ... 60 3e-006
gb|AV537459.1|AV537459 AV537459 Arabidopsis thaliana roots ... 60 3e-006
gb|AV538027.1|AV538027 AV538027 Arabidopsis thaliana roots ... 60 3e-006
gb|AV546309.1|AV546309 AV546309 Arabidopsis thaliana roots ... 60 3e-006
gb|AV546311.1|AV546311 AV546311 Arabidopsis thaliana roots ... 60 3e-006
gb|AV546312.1|AV546312 AV546312 Arabidopsis thaliana roots ... 60 3e-006
gb|AV552905.1|AV552905 AV552905 Arabidopsis thaliana roots ... 60 3e-006
gb|AV560817.1|AV560817 AV560817 Arabidopsis thaliana green ... 60 3e-006
gb|AV562949.1|AV562949 AV562949 Arabidopsis thaliana green ... 60 3e-006
gb|BP841009.1|BP841009 BP841009 RAFL19 Arabidopsis thaliana... 60 3e-006
emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cD... 60 3e-006
dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosom... 60 3e-006
dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose syn... 60 3e-006
gb|BH748699.1|BH748699 SALK_046453.54.75.x Arabidopsis thal... 58 1e-005
gb|BH847307.1|BH847307 SALK_052351.56.00.x Arabidopsis thal... 58 1e-005
gb|CL497288.1|CL497288 SAIL_639_H07.v1 SAIL Collection Arab... 58 1e-005
gb|Z30729.1|Z30729 ATTS2475 Versailles-VB Arabidopsis thali... 58 1e-005
gb|AV782896.1|AV782896 AV782896 RAFL5 Arabidopsis thaliana ... 58 1e-005
gb|AV784570.1|AV784570 AV784570 RAFL5 Arabidopsis thaliana ... 58 1e-005
gb|AV830043.1|AV830043 AV830043 RAFL9 Arabidopsis thaliana ... 58 1e-005
gb|AB038726.1|AB038726 AB038726 Arabidopsis thaliana Above-... 58 1e-005
gb|AV442267.1|AV442267 AV442267 Arabidopsis thaliana above-... 58 1e-005
gb|AV518616.1|AV518616 AV518616 Arabidopsis thaliana aboveg... 58 1e-005
gb|AV524115.1|AV524115 AV524115 Arabidopsis thaliana aboveg... 58 1e-005
gb|AV529432.1|AV529432 AV529432 Arabidopsis thaliana aboveg... 58 1e-005
gb|AV529461.1|AV529461 AV529461 Arabidopsis thaliana aboveg... 58 1e-005
gb|AV546144.1|AV546144 AV546144 Arabidopsis thaliana roots ... 58 1e-005
gb|AV546832.1|AV546832 AV546832 Arabidopsis thaliana roots ... 58 1e-005
gb|BP648320.1|BP648320 BP648320 RAFL19 Arabidopsis thaliana... 58 1e-005
gb|BP649265.1|BP649265 BP649265 RAFL19 Arabidopsis thaliana... 58 1e-005
gb|BP780628.1|BP780628 BP780628 RAFL7 Arabidopsis thaliana ... 58 1e-005
gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B... 58 1e-005
gb|BZ766414.1|BZ766414 SALK_137389.45.80.x Arabidopsis thal... 56 5e-005
gb|CK117572.1|CK117572 215o03.p1 AtM1 Arabidopsis thaliana ... 56 5e-005
gb|CK119314.1|CK119314 204i17.p1 AtM1 Arabidopsis thaliana ... 56 5e-005
gb|CK120272.1|CK120272 207o02.p1 AtM1 Arabidopsis thaliana ... 56 5e-005
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 56 5e-005
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 56 5e-005
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 56 5e-005
emb|BX821788.1|CNS0A924 Arabidopsis thaliana Full-length cD... 56 5e-005
emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome ... 56 5e-005
ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose sy... 56 5e-005
ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose sy... 56 5e-005
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 56 5e-005
emb|CR401305.1| Arabidopsis thaliana T-DNA flanking sequenc... 54 2e-004
gb|T20782.1|T20782 2790 Lambda-PRL2 Arabidopsis thaliana cD... 54 2e-004
gb|AV829450.1|AV829450 AV829450 RAFL9 Arabidopsis thaliana ... 54 2e-004
gb|AV539120.1|AV539120 AV539120 Arabidopsis thaliana roots ... 54 2e-004
ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G1... 54 2e-004
ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G1... 54 2e-004
gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana ... 52 7e-004
gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana ... 52 7e-004
gb|CL469416.1|CL469416 SAIL_1303_D08.v1 SAIL Collection Ara... 52 7e-004
emb|BX002729.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 7e-004
gb|AI992761.1|AI992761 701493456 A. thaliana, Ohio State cl... 52 7e-004
gb|AV523139.1|AV523139 AV523139 Arabidopsis thaliana aboveg... 52 7e-004
gb|BP574614.1|BP574614 BP574614 RAFL14 Arabidopsis thaliana... 52 7e-004
gb|BP658847.1|BP658847 BP658847 RAFL19 Arabidopsis thaliana... 52 7e-004
emb|BX829237.1|CNS0A4ID Arabidopsis thaliana Full-length cD... 52 7e-004
gb|BZ664965.1|BZ664965 SALK_110333.41.90.x Arabidopsis thal... 50 0.003
emb|BX948437.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 0.003
gb|BE530485.1|BE530485 M77N01STM Arabidopsis developing see... 50 0.003
gb|AU229295.1|AU229295 AU229295 RAFL16 Arabidopsis thaliana... 50 0.003
gb|AV540720.1|AV540720 AV540720 Arabidopsis thaliana roots ... 50 0.003
emb|BX822015.1|CNS0AAAJ Arabidopsis thaliana Full-length cD... 50 0.003
gb|B96505.1|B96505 F23A23TF IGF Arabidopsis thaliana genomi... 48 0.012
emb|AL080857.1|CNS00MNV Arabidopsis thaliana genome survey ... 48 0.012
gb|AQ955592.1|AQ955592 LERAE88TF LERA Arabidopsis thaliana ... 48 0.012
gb|BH789782.1|BH789782 SALK_046685.56.00.x Arabidopsis thal... 48 0.012
gb|AA650885.1|AA650885 30999 Lambda-PRL2 Arabidopsis thalia... 48 0.012
gb|AV439681.1|AV439681 AV439681 Arabidopsis thaliana above-... 48 0.012
gb|AV521693.1|AV521693 AV521693 Arabidopsis thaliana aboveg... 48 0.012
gb|AV524358.1|AV524358 AV524358 Arabidopsis thaliana aboveg... 48 0.012
gb|BH865757.1|BH865757 SALK_099805 Arabidopsis thaliana TDN... 46 0.046
gb|CW801166.1|CW801166 WiscDsLox293-296invG24 Arabidopsis t... 46 0.046
gb|Z35212.1|Z35212 ATTS3758 Strasbourg-A Arabidopsis thalia... 46 0.046
gb|T45303.1|T45303 8566 Lambda-PRL2 Arabidopsis thaliana cD... 46 0.046
gb|AI995332.1|AI995332 701673135 A. thaliana, Columbia Col-... 46 0.046
gb|AV561501.1|AV561501 AV561501 Arabidopsis thaliana green ... 46 0.046
gb|BP784043.1|BP784043 BP784043 RAFL7 Arabidopsis thaliana ... 46 0.046
gb|BP790874.1|BP790874 BP790874 RAFL7 Arabidopsis thaliana ... 46 0.046
gb|BP804496.1|BP804496 BP804496 RAFL16 Arabidopsis thaliana... 46 0.046
gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synth... 46 0.046
gb|AF360180.1| Arabidopsis thaliana putative cellulose synt... 46 0.046
gb|AY039996.1| Arabidopsis thaliana putative cellulose synt... 46 0.046
emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene fo... 46 0.046
gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome II... 46 0.046
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 46 0.046
dbj|AK175868.1| Arabidopsis thaliana mRNA for putative cell... 46 0.046
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 46 0.046
ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNT... 46 0.046
ref|NM_128870.3| Arabidopsis thaliana ATCSLD1; cellulose sy... 46 0.046
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 46 0.046
gb|CC794586.1|CC794586 SALK_052533.32.20.x Arabidopsis thal... 44 0.18
emb|AL951915.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.18
emb|CR399547.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.18
emb|CR399548.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.18
gb|CW794531.1|CW794531 WiscDsLox364G07 Arabidopsis thaliana... 44 0.18
gb|H76149.1|H76149 17854 Lambda-PRL2 Arabidopsis thaliana c... 44 0.18
gb|W43509.1|W43509 22886 CD4-15 Arabidopsis thaliana cDNA c... 44 0.18
gb|AI994360.1|AI994360 701557762 A. thaliana, Ohio State cl... 44 0.18
gb|AV806463.1|AV806463 AV806463 RAFL9 Arabidopsis thaliana ... 44 0.18
gb|AV806728.1|AV806728 AV806728 RAFL9 Arabidopsis thaliana ... 44 0.18
gb|AV523011.1|AV523011 AV523011 Arabidopsis thaliana aboveg... 44 0.18
gb|AV528526.1|AV528526 AV528526 Arabidopsis thaliana aboveg... 44 0.18
gb|AV530113.1|AV530113 AV530113 Arabidopsis thaliana aboveg... 44 0.18
gb|AV544042.1|AV544042 AV544042 Arabidopsis thaliana roots ... 44 0.18
gb|AV545907.1|AV545907 AV545907 Arabidopsis thaliana roots ... 44 0.18
gb|AV546317.1|AV546317 AV546317 Arabidopsis thaliana roots ... 44 0.18
gb|AV547629.1|AV547629 AV547629 Arabidopsis thaliana roots ... 44 0.18
gb|AV558374.1|AV558374 AV558374 Arabidopsis thaliana green ... 44 0.18
gb|AV564362.1|AV564362 AV564362 Arabidopsis thaliana green ... 44 0.18
gb|BP581479.1|BP581479 BP581479 RAFL14 Arabidopsis thaliana... 44 0.18
gb|BP593312.1|BP593312 BP593312 RAFL15 Arabidopsis thaliana... 44 0.18
gb|BP602929.1|BP602929 BP602929 RAFL16 Arabidopsis thaliana... 44 0.18
gb|BP608218.1|BP608218 BP608218 RAFL16 Arabidopsis thaliana... 44 0.18
gb|BP613149.1|BP613149 BP613149 RAFL16 Arabidopsis thaliana... 44 0.18
gb|BP614104.1|BP614104 BP614104 RAFL16 Arabidopsis thaliana... 44 0.18
gb|BP617385.1|BP617385 BP617385 RAFL16 Arabidopsis thaliana... 44 0.18
gb|BP619970.1|BP619970 BP619970 RAFL16 Arabidopsis thaliana... 44 0.18
gb|BP640849.1|BP640849 BP640849 RAFL19 Arabidopsis thaliana... 44 0.18
gb|BP642979.1|BP642979 BP642979 RAFL19 Arabidopsis thaliana... 44 0.18
gb|BP654213.1|BP654213 BP654213 RAFL19 Arabidopsis thaliana... 44 0.18
gb|BP804846.1|BP804846 BP804846 RAFL16 Arabidopsis thaliana... 44 0.18
gb|AC074176.5|AC074176 Arabidopsis thaliana chromosome 1 BA... 44 0.18
>ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNTHASE 9); transferase,
transferring glycosyl groups AT2G21770 (CESA9) mRNA,
complete cds
Length = 3308
Score = 170 bits (86), Expect = 1e-039
Identities = 437/554 (78%)
Strand = Plus / Minus
Query: 2014 tgccttctgaagacacatccagtacccacataaattgggccctggataccatccaaacct 2073
||||||||||||||||| || || |||||||| || || || || || ||||| ||||||
Sbjct: 1937 tgccttctgaagacacacccggtccccacatatatcggtccttgtatgccatctaaacct 1878
Query: 2074 ttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatc 2133
||||||||||||||||| || || ||||| | || | |||||||| || | |||||||
Sbjct: 1877 ttcatgttgatatcgaagaaaaccacattgcgatttgagtatcgatcgtgtctatcaatc 1818
Query: 2134 ccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatc 2193
|||||||| || ||||||||||| ||||| || | ||||||||| | || ||||||
Sbjct: 1817 ccatcaaacctctgaggaaactgaacataacatattttctttccggactgcgggtccatc 1758
Query: 2194 ataaaacacattgcttcctttatagccttactattattgatatagtgatcacaatccaag 2253
|| |||||||| ||||| | || ||||| || || ||||| || |||||||| ||||
Sbjct: 1757 atgaaacacatagcttctctaattgccttgctgttgttgatgtaatgatcacagtccaca 1698
Query: 2254 ttcagcaaataaggagcattagttagtacagcagagactcggaccaatgcattcatagca 2313
|| || | ||||||||||| | || |||||||| || |||| ||| | |||||||||
Sbjct: 1697 ttaagaaggtaaggagcatttgagagaacagcagatacccggatcaaggaattcatagct 1638
Query: 2314 ccagccttcttgtgatggttgtagcctggccgtttttctcttgaaacataaaccaatcga 2373
||||||||||| || || | | || || || || || | |||||||| ||||| |||
Sbjct: 1637 ccagccttcttatggtgatcaaatcccggtcgcttctcacgagaaacatacaccaaacga 1578
Query: 2374 ggcagctcatttccttccacatcatggccaccactttgaccaaggaaaacctgaatcatt 2433
|| | ||||||||| |||| |||| | || || || || ||||||||||||||||||
Sbjct: 1577 ggtaactcatttccatccatatcacaaactccgctgtgtcccaggaaaacctgaatcatt 1518
Query: 2434 ccaggatgatcacggacattatttccgggccatggagttccatcctgcattgtccatcct 2493
|| ||||| || |||||||| ||||| ||||| ||||||||||| ||||| ||||| ||
Sbjct: 1517 cctggatggtcccggacattgtttccaggccaaggagttccatcttgcatagtccaacca 1458
Query: 2494 tcctcaggaaccttttgggctttagcaaccaaggcattgattctgaccttgaattcctca 2553
|| |||||||| || || | | || |||||| ||||| || | || ||||||||||||
Sbjct: 1457 tcttcaggaactttctgtgatacagaaaccaatgcatttatctttactttgaattcctca 1398
Query: 2554 tactctctcttcat 2567
|| |||||||||||
Sbjct: 1397 tagtctctcttcat 1384
Score = 99.6 bits (50), Expect = 4e-018
Identities = 245/310 (79%)
Strand = Plus / Minus
Query: 2674 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 2733
||||||||||||||||| ||||||| || | ||| | ||| | ||||||||||| |||
Sbjct: 1277 cagaaaggaacccattttcttgcaaactcggctgtgtaagagagagcttcaaatgtaagc 1218
Query: 2734 atggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaa 2793
|| |||||||||||||| || || || || | |||||| ||||| |||||||| || |
Sbjct: 1217 attgcagcaccatcatctgatacataacatgcaaccttctcaaccggataatcaacagcg 1158
Query: 2794 aggatagatagaacagtattagcagtgaccaatggaggttccttcaagggatcaaccgta 2853
|| ||||| ||||| ||||| || || | || |||||| || ||||| ||||| || |||
Sbjct: 1157 agaatagacagaaccgtatttgctgtaatcagtggaggctctttcaatggatccacagta 1098
Query: 2854 ctgacaaagaaatcaacaggggcgagttgagaaggatgcccttccttgtcaaaccttaaa 2913
|| ||||||| ||| ||||| || | | || || | ||||||||| ||| |||||| |
Sbjct: 1097 ctaacaaagacatcgacaggcgctaactctgatggcttcccttccttctcataccttaga 1038
Query: 2914 ctcagccggtcaagataggtttccctctcgataggaaaccactttggaaactggtcaaga 2973
|||| ||| ||||| ||||| || ||||| ||| |||| ||||| ||||| ||||||
Sbjct: 1037 gaaagcctgtcgagatatgtttctctttcgatgggataccattttgggaactgatcaaga 978
Query: 2974 atccaagaca 2983
||||||||||
Sbjct: 977 atccaagaca 968
Score = 95.6 bits (48), Expect = 6e-017
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 1081 aacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccac 1140
|||| |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2843 aacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtttctccac 2784
Query: 1141 cagtcatcgatgccta 1156
|| |||||||| ||||
Sbjct: 2783 caatcatcgattccta 2768
Score = 52.0 bits (26), Expect = 7e-004
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatctt-aaacccagtaagaatatcttctgtgactgatccataaatcca 1586
|||||||| |||||||| |||||| ||||| |||| || ||||| || |||||||||||
Sbjct: 2396 ccatggcaatgcatcttgaaacccgttaaga-tatcctcagtgaccgagccataaatcca 2338
Query: 1587 accaatatcttttcccca 1604
||||| |||||||||||
Sbjct: 2337 cccaatctcttttcccca 2320
>dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3603
Score = 161 bits (81), Expect = 1e-036
Identities = 426/541 (78%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 1898 ccagtacccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaa 1839
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 1838 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 1779
Query: 2152 aactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcc 2211
||||| |||||||| |||||||||| || |||||||| |||||||| |||||
Sbjct: 1778 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 1719
Query: 2212 tttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagca 2271
|| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | ||
Sbjct: 1718 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 1659
Query: 2272 ttagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatgg 2331
|| || || |||||||| || |||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 1658 ttggtaagaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgt 1599
Query: 2332 ttgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcc 2391
| | || ||||| ||||| | |||||||| | | || ||||||||||||||| ||
Sbjct: 1598 tgaaatccaggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcg 1539
Query: 2392 acatcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggaca 2451
||| | || ||||| || || | ||| ||||| ||||||||||||||||| |
Sbjct: 1538 gtatccagacccccactatggcctaagaacacctgtatcattccaggatgatctctagtg 1479
Query: 2452 ttatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttgg 2511
|| || || ||||| ||||| ||||||||||||||||| ||||| ||||| | || ||
Sbjct: 1478 ttgttaccaggccagggagtaccatcctgcattgtccagccttcttcagggattttctgt 1419
Query: 2512 gctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| | ||||| || || || || || || ||||||||||||||||| |||
Sbjct: 1418 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 1359
Query: 2572 c 2572
|
Sbjct: 1358 c 1358
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 2363 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 2304
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 2303 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 2244
Query: 1657 agag 1660
||||
Sbjct: 2243 agag 2240
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 2789 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 2730
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 2729 agctccaggat 2719
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 3183 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 3124
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 3123 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 3064
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 3063 aacccataaggcgaagaagagcttcccgaa 3034
Score = 44.1 bits (22), Expect = 0.18
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 2683 acccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagca 2742
||||||||||||||||| |||| |||||||| | | |||||| || ||||| || | |
Sbjct: 1247 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1188
Query: 2743 ccatcatcagaaac 2756
|||||||| |||||
Sbjct: 1187 ccatcatctgaaac 1174
>emb|AX030942.1| Sequence 5 from Patent WO9800549
Length = 3603
Score = 161 bits (81), Expect = 1e-036
Identities = 426/541 (78%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 1898 ccagtacccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaa 1839
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 1838 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 1779
Query: 2152 aactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcc 2211
||||| |||||||| |||||||||| || |||||||| |||||||| |||||
Sbjct: 1778 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 1719
Query: 2212 tttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagca 2271
|| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | ||
Sbjct: 1718 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 1659
Query: 2272 ttagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatgg 2331
|| || || |||||||| || |||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 1658 ttggtaagaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgt 1599
Query: 2332 ttgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcc 2391
| | || ||||| ||||| | |||||||| | | || ||||||||||||||| ||
Sbjct: 1598 tgaaatccaggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcg 1539
Query: 2392 acatcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggaca 2451
||| | || ||||| || || | ||| ||||| ||||||||||||||||| |
Sbjct: 1538 gtatccagacccccactatggcctaagaacacctgtatcattccaggatgatctctagtg 1479
Query: 2452 ttatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttgg 2511
|| || || ||||| ||||| ||||||||||||||||| ||||| ||||| | || ||
Sbjct: 1478 ttgttaccaggccagggagtaccatcctgcattgtccagccttcttcagggattttctgt 1419
Query: 2512 gctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| | ||||| || || || || || || ||||||||||||||||| |||
Sbjct: 1418 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 1359
Query: 2572 c 2572
|
Sbjct: 1358 c 1358
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 2363 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 2304
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 2303 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 2244
Query: 1657 agag 1660
||||
Sbjct: 2243 agag 2240
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 2789 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 2730
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 2729 agctccaggat 2719
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 3183 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 3124
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 3123 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 3064
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 3063 aacccataaggcgaagaagagcttcccgaa 3034
Score = 44.1 bits (22), Expect = 0.18
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 2683 acccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagca 2742
||||||||||||||||| |||| |||||||| | | |||||| || ||||| || | |
Sbjct: 1247 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1188
Query: 2743 ccatcatcagaaac 2756
|||||||| |||||
Sbjct: 1187 ccatcatctgaaac 1174
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose
synthase catalytic subunit (RSW1) (At4g32410) mRNA,
complete cds
Length = 3763
Score = 161 bits (81), Expect = 1e-036
Identities = 426/541 (78%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 2042 ccagtacccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaa 1983
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 1982 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 1923
Query: 2152 aactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcc 2211
||||| |||||||| |||||||||| || |||||||| |||||||| |||||
Sbjct: 1922 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 1863
Query: 2212 tttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagca 2271
|| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | ||
Sbjct: 1862 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 1803
Query: 2272 ttagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatgg 2331
|| || || |||||||| || |||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 1802 ttggtaagaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgt 1743
Query: 2332 ttgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcc 2391
| | || ||||| ||||| | |||||||| | | || ||||||||||||||| ||
Sbjct: 1742 tgaaatccaggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcg 1683
Query: 2392 acatcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggaca 2451
||| | || ||||| || || | ||| ||||| ||||||||||||||||| |
Sbjct: 1682 gtatccagacccccactatggcctaagaacacctgtatcattccaggatgatctctagtg 1623
Query: 2452 ttatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttgg 2511
|| || || ||||| ||||| ||||||||||||||||| ||||| ||||| | || ||
Sbjct: 1622 ttgttaccaggccagggagtaccatcctgcattgtccagccttcttcagggattttctgt 1563
Query: 2512 gctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| | ||||| || || || || || || ||||||||||||||||| |||
Sbjct: 1562 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 1503
Query: 2572 c 2572
|
Sbjct: 1502 c 1502
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 2507 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 2448
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 2447 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 2388
Query: 1657 agag 1660
||||
Sbjct: 2387 agag 2384
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 2933 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 2874
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 2873 agctccaggat 2863
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 3327 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 3268
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 3267 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 3208
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 3207 aacccataaggcgaagaagagcttcccgaa 3178
Score = 44.1 bits (22), Expect = 0.18
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 2683 acccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagca 2742
||||||||||||||||| |||| |||||||| | | |||||| || ||||| || | |
Sbjct: 1391 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1332
Query: 2743 ccatcatcagaaac 2756
|||||||| |||||
Sbjct: 1331 ccatcatctgaaac 1318
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase,
transferring glycosyl groups AT4G32410 (CESA1) mRNA,
complete cds
Length = 3912
Score = 161 bits (81), Expect = 1e-036
Identities = 426/541 (78%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 2175 ccagtacccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaa 2116
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 2115 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 2056
Query: 2152 aactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcc 2211
||||| |||||||| |||||||||| || |||||||| |||||||| |||||
Sbjct: 2055 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 1996
Query: 2212 tttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagca 2271
|| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | ||
Sbjct: 1995 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 1936
Query: 2272 ttagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatgg 2331
|| || || |||||||| || |||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 1935 ttggtaagaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgt 1876
Query: 2332 ttgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcc 2391
| | || ||||| ||||| | |||||||| | | || ||||||||||||||| ||
Sbjct: 1875 tgaaatccaggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcg 1816
Query: 2392 acatcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggaca 2451
||| | || ||||| || || | ||| ||||| ||||||||||||||||| |
Sbjct: 1815 gtatccagacccccactatggcctaagaacacctgtatcattccaggatgatctctagtg 1756
Query: 2452 ttatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttgg 2511
|| || || ||||| ||||| ||||||||||||||||| ||||| ||||| | || ||
Sbjct: 1755 ttgttaccaggccagggagtaccatcctgcattgtccagccttcttcagggattttctgt 1696
Query: 2512 gctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| | ||||| || || || || || || ||||||||||||||||| |||
Sbjct: 1695 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 1636
Query: 2572 c 2572
|
Sbjct: 1635 c 1635
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 2640 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 2581
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 2580 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 2521
Query: 1657 agag 1660
||||
Sbjct: 2520 agag 2517
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 3066 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 3007
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 3006 agctccaggat 2996
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 3460 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 3401
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 3400 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 3341
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 3340 aacccataaggcgaagaagagcttcccgaa 3311
Score = 44.1 bits (22), Expect = 0.18
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 2683 acccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagca 2742
||||||||||||||||| |||| |||||||| | | |||||| || ||||| || | |
Sbjct: 1524 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1465
Query: 2743 ccatcatcagaaac 2756
|||||||| |||||
Sbjct: 1464 ccatcatctgaaac 1451
>dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3673
Score = 153 bits (77), Expect = 3e-034
Identities = 425/541 (78%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 1968 ccagtacccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaa 1909
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 1908 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 1849
Query: 2152 aactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcc 2211
||||| |||||||| |||||||||| || |||||||| |||||||| |||||
Sbjct: 1848 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 1789
Query: 2212 tttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagca 2271
|| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | ||
Sbjct: 1788 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 1729
Query: 2272 ttagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatgg 2331
|| || || ||| |||| || |||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 1728 ttggtaagaacaacagatacacggatcaatgcattcatagctccagcctttttgtggtgt 1669
Query: 2332 ttgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcc 2391
| | || ||||| ||||| | |||||||| | | || ||||||||||||||| ||
Sbjct: 1668 tgaaatccaggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcg 1609
Query: 2392 acatcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggaca 2451
||| | || ||||| || || | ||| ||||| ||||||||||||||||| |
Sbjct: 1608 gtatccagacccccactatggcctaagaacacctgtatcattccaggatgatctctagtg 1549
Query: 2452 ttatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttgg 2511
|| || || ||||| ||||| ||||||||||||||||| ||||| ||||| | || ||
Sbjct: 1548 ttgttaccaggccagggagtaccatcctgcattgtccagccttcttcagggattttctgt 1489
Query: 2512 gctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| | ||||| || || || || || || ||||||||||||||||| |||
Sbjct: 1488 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 1429
Query: 2572 c 2572
|
Sbjct: 1428 c 1428
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 2433 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 2374
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 2373 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 2314
Query: 1657 agag 1660
||||
Sbjct: 2313 agag 2310
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 2859 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 2800
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 2799 agctccaggat 2789
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 3253 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 3194
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 3193 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 3134
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 3133 aacccataaggcgaagaagagcttcccgaa 3104
Score = 44.1 bits (22), Expect = 0.18
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 2683 acccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagca 2742
||||||||||||||||| |||| |||||||| | | |||||| || ||||| || | |
Sbjct: 1317 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1258
Query: 2743 ccatcatcagaaac 2756
|||||||| |||||
Sbjct: 1257 ccatcatctgaaac 1244
>emb|AX030948.1| Sequence 11 from Patent WO9800549
Length = 3673
Score = 153 bits (77), Expect = 3e-034
Identities = 425/541 (78%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 1968 ccagtacccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaa 1909
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 1908 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 1849
Query: 2152 aactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcc 2211
||||| |||||||| |||||||||| || |||||||| |||||||| |||||
Sbjct: 1848 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 1789
Query: 2212 tttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagca 2271
|| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | ||
Sbjct: 1788 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 1729
Query: 2272 ttagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatgg 2331
|| || || ||| |||| || |||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 1728 ttggtaagaacaacagatacacggatcaatgcattcatagctccagcctttttgtggtgt 1669
Query: 2332 ttgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcc 2391
| | || ||||| ||||| | |||||||| | | || ||||||||||||||| ||
Sbjct: 1668 tgaaatccaggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcg 1609
Query: 2392 acatcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggaca 2451
||| | || ||||| || || | ||| ||||| ||||||||||||||||| |
Sbjct: 1608 gtatccagacccccactatggcctaagaacacctgtatcattccaggatgatctctagtg 1549
Query: 2452 ttatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttgg 2511
|| || || ||||| ||||| ||||||||||||||||| ||||| ||||| | || ||
Sbjct: 1548 ttgttaccaggccagggagtaccatcctgcattgtccagccttcttcagggattttctgt 1489
Query: 2512 gctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| | ||||| || || || || || || ||||||||||||||||| |||
Sbjct: 1488 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 1429
Query: 2572 c 2572
|
Sbjct: 1428 c 1428
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 2433 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 2374
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 2373 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 2314
Query: 1657 agag 1660
||||
Sbjct: 2313 agag 2310
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 2859 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 2800
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 2799 agctccaggat 2789
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 3253 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 3194
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 3193 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 3134
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 3133 aacccataaggcgaagaagagcttcccgaa 3104
Score = 44.1 bits (22), Expect = 0.18
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 2683 acccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagca 2742
||||||||||||||||| |||| |||||||| | | |||||| || ||||| || | |
Sbjct: 1317 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 1258
Query: 2743 ccatcatcagaaac 2756
|||||||| |||||
Sbjct: 1257 ccatcatctgaaac 1244
>gb|CB255846.1|CB255846 17-E011665-027-006-B05-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772B056Q 5-PRIME, mRNA sequence
Length = 424
Score = 141 bits (71), Expect = 1e-030
Identities = 239/295 (81%)
Strand = Plus / Minus
Query: 2033 cagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaaa 2092
||||||||||||| | ||| | ||||||||||||||| || |||||||| ||||||||||
Sbjct: 366 cagtacccacatatactggacgctggataccatccaaccccttcatgttaatatcgaaaa 307
Query: 2093 agacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgaggaa 2152
|||| | ||| ||||| ||||||||||| || |||||| || ||||| | |||||| |
Sbjct: 306 agactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggga 247
Query: 2153 actgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcct 2212
|||| |||||||| |||||||||| || |||||||| |||||||| ||||| |
Sbjct: 246 actggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctt 187
Query: 2213 ttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagcat 2272
| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | |||
Sbjct: 186 taatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccat 127
Query: 2273 tagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtg 2327
| || || |||||||| || |||| ||||||||||||||| |||||||| |||||
Sbjct: 126 tggtaagaacagcagatacacggatcaatgcattcatagctccagcctttttgtg 72
>dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 2248
Score = 137 bits (69), Expect = 2e-029
Identities = 423/541 (78%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| || |||||||||||||| || |||||||| |||||||||
Sbjct: 542 ccagtacccacatatactggaccgtggataccatccaaccccttcatgttaatatcgaaa 483
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 482 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 423
Query: 2152 aactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcc 2211
||||| |||||||| |||||||||| || |||||||| |||||||| |||||
Sbjct: 422 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 363
Query: 2212 tttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagca 2271
|| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | ||
Sbjct: 362 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 303
Query: 2272 ttagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatgg 2331
|| || || |||||||| || |||| | ||||||||||||| |||||||| ||||| ||
Sbjct: 302 ttggtaagaacagcagatacacggatcgatgcattcatagctccagcctttttgtggtgt 243
Query: 2332 ttgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcc 2391
| | || ||||| ||||| | |||||||| | | || ||||||||||||||| ||
Sbjct: 242 tgaaatccaggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcg 183
Query: 2392 acatcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggaca 2451
||| | || ||||| || || | ||| ||||| ||||||||||||||||| |
Sbjct: 182 gtatccagacccccactatggcctaagaacacctgtatcattccaggatgatctctagtg 123
Query: 2452 ttatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttgg 2511
|| || || ||||| ||||| ||||||||||||||||| ||||| |||| | || ||
Sbjct: 122 ttgttaccaggccagggagtaccatcctgcattgtccagccttctccagggattttctgt 63
Query: 2512 gctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| | ||||| || || || || || || ||||||||||||||||| |||
Sbjct: 62 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 3
Query: 2572 c 2572
|
Sbjct: 2 c 2
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 1007 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 948
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 947 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 888
Query: 1657 agag 1660
||||
Sbjct: 887 agag 884
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 1827 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 1768
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 1767 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 1708
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 1707 aacccataaggcgaagaagagcttcccgaa 1678
>emb|AX030938.1| Sequence 1 from Patent WO9800549
Length = 2248
Score = 137 bits (69), Expect = 2e-029
Identities = 423/541 (78%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| || |||||||||||||| || |||||||| |||||||||
Sbjct: 542 ccagtacccacatatactggaccgtggataccatccaaccccttcatgttaatatcgaaa 483
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 482 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 423
Query: 2152 aactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcc 2211
||||| |||||||| |||||||||| || |||||||| |||||||| |||||
Sbjct: 422 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 363
Query: 2212 tttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagca 2271
|| ||||||||||| ||||| | || ||||||||||||| ||||| | ||| | ||
Sbjct: 362 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 303
Query: 2272 ttagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatgg 2331
|| || || |||||||| || |||| | ||||||||||||| |||||||| ||||| ||
Sbjct: 302 ttggtaagaacagcagatacacggatcgatgcattcatagctccagcctttttgtggtgt 243
Query: 2332 ttgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcc 2391
| | || ||||| ||||| | |||||||| | | || ||||||||||||||| ||
Sbjct: 242 tgaaatccaggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcg 183
Query: 2392 acatcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggaca 2451
||| | || ||||| || || | ||| ||||| ||||||||||||||||| |
Sbjct: 182 gtatccagacccccactatggcctaagaacacctgtatcattccaggatgatctctagtg 123
Query: 2452 ttatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttgg 2511
|| || || ||||| ||||| ||||||||||||||||| ||||| |||| | || ||
Sbjct: 122 ttgttaccaggccagggagtaccatcctgcattgtccagccttctccagggattttctgt 63
Query: 2512 gctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| | ||||| || || || || || || ||||||||||||||||| |||
Sbjct: 62 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 3
Query: 2572 c 2572
|
Sbjct: 2 c 2
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 1007 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 948
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 947 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 888
Query: 1657 agag 1660
||||
Sbjct: 887 agag 884
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 1827 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 1768
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 1767 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 1708
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 1707 aacccataaggcgaagaagagcttcccgaa 1678
>gb|CB253730.1|CB253730 90-E010932-019-003-C24-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768C243Q 5-PRIME, mRNA sequence
Length = 565
Score = 117 bits (59), Expect = 2e-023
Identities = 212/263 (80%)
Strand = Plus / Minus
Query: 2062 ccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatca 2121
||||||||||||||||| |||||||| || || |||||||| | || | ||||||||
Sbjct: 491 ccatccaaacctttcatattgatatcaaagaacacaacattgcgatttgagtatcgatcg 432
Query: 2122 tggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagc 2181
|| | |||||||||||| || |||||||| ||||| ||||| || | ||||||||| |
Sbjct: 431 tgcctatcaatcccatcgaacctttgagggaactgaacataacagattttctttcctgac 372
Query: 2182 aaaggatccatcataaaacacattgcttcctttatagccttactattattgatatagtga 2241
|||||||||||| |||||||||||||| | | ||| || ||||| ||||| ||||||
Sbjct: 371 tgaggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtga 312
Query: 2242 tcacaatccaagttcagcaaataaggagcattagttagtacagcagagactcggaccaat 2301
|||||||| | ||||| | ||||||||||| | ||| || |||||||||| | ||
Sbjct: 311 tcacaatcgacattcagaaggtaaggagcatttgatagaaccccagagactcgtatcagg 252
Query: 2302 gcattcatagcaccagccttctt 2324
| ||||||||| |||||||||||
Sbjct: 251 gaattcatagctccagccttctt 229
Score = 65.9 bits (33), Expect = 5e-008
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 2413 ccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggccatggagtt 2472
|||||||| ||||||||||| ||||||||||| || ||| |||| |||||||| || ||
Sbjct: 140 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 81
Query: 2473 ccatcctgcattgtccatccttcctcagg 2501
|| || ||||| ||||| || ||||||||
Sbjct: 80 ccgtcttgcatagtccaaccatcctcagg 52
>gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synthase mRNA, partial cds
Length = 3444
Score = 117 bits (59), Expect = 2e-023
Identities = 212/263 (80%)
Strand = Plus / Minus
Query: 2062 ccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatca 2121
||||||||||||||||| |||||||| || || |||||||| | || | ||||||||
Sbjct: 1863 ccatccaaacctttcatattgatatcaaagaacacaacattgcgatttgagtatcgatcg 1804
Query: 2122 tggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagc 2181
|| | |||||||||||| || |||||||| ||||| ||||| || | ||||||||| |
Sbjct: 1803 tgcctatcaatcccatcgaacctttgagggaactgaacataacagattttctttcctgac 1744
Query: 2182 aaaggatccatcataaaacacattgcttcctttatagccttactattattgatatagtga 2241
|||||||||||| |||||||||||||| | | ||| || ||||| ||||| ||||||
Sbjct: 1743 tgaggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtga 1684
Query: 2242 tcacaatccaagttcagcaaataaggagcattagttagtacagcagagactcggaccaat 2301
|||||||| | ||||| | ||||||||||| | ||| || |||||||||| | ||
Sbjct: 1683 tcacaatcgacattcagaaggtaaggagcatttgatagaaccccagagactcgtatcagg 1624
Query: 2302 gcattcatagcaccagccttctt 2324
| ||||||||| |||||||||||
Sbjct: 1623 gaattcatagctccagccttctt 1601
Score = 105 bits (53), Expect = 6e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 2635 taccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttcttt 2694
||||| || |||||||||||||||| | |||| | ||||||||||||||||||||| ||
Sbjct: 1290 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 1231
Query: 2695 gcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaa 2754
|| ||||||| || ||||| | ||||| || || ||||| |||||||||||||||||
Sbjct: 1230 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcagat 1171
Query: 2755 acgtagcacgaaaccttatcaactggataatccaccgaaaggatagatagaacagtatta 2814
||||| || | ||||||||| || |||||||| || | ||| ||||| | ||||||||
Sbjct: 1170 acgtaacaagcaaccttatcgacaggataatcaacagcaagaatagacaagacagtattt 1111
Query: 2815 gcagt 2819
|||||
Sbjct: 1110 gcagt 1106
Score = 89.7 bits (45), Expect = 3e-015
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 1027 gatgtcacagtgaagctcgtgtctacaccagctatgaccttgagtagtccctggaacaca 1086
||||| || |||||| | ||||| |||||||| | |||||||| || || ||||| | |
Sbjct: 2880 gatgtgactgtgaagttagtgtcgacaccagcaagaaccttgaggagaccttggaagaga 2821
Query: 1087 gcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtca 1146
||||| ||||| | ||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 2820 gcaaacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatca 2761
Query: 1147 tcgat 1151
|||||
Sbjct: 2760 tcgat 2756
Score = 87.7 bits (44), Expect = 1e-014
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 2413 ccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggccatggagtt 2472
|||||||| ||||||||||| ||||||||||| || ||| |||| |||||||| || ||
Sbjct: 1512 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 1453
Query: 2473 ccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattg 2532
|| || ||||| ||||| || |||||||| || || || ||| | || || || ||||||
Sbjct: 1452 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 1393
Query: 2533 attctgaccttgaattcctcatactctctcttcattgctctccgttctctaacaaa 2588
|| | || |||||||| ||||| ||||||||||| |||| ||| || ||||||||
Sbjct: 1392 atctttactttgaattcttcataatctctcttcatggctcgccgctccctaacaaa 1337
Score = 67.9 bits (34), Expect = 1e-008
Identities = 85/102 (83%)
Strand = Plus / Minus
Query: 1524 ccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaat 1583
||||||||| | ||||||||| | || |||||||||||||| || || || ||||| ||
Sbjct: 2383 ccaaccatgagaatgcatcttagaacccgtaagaatatcttcggtaacagaaccatagat 2324
Query: 1584 ccaaccaatatcttttccccagcctgttttgtcttcatatcc 1625
||| ||||| ||||||||||| | ||||| |||||||||||
Sbjct: 2323 ccacccaatctcttttccccattcagttttatcttcatatcc 2282
Score = 58.0 bits (29), Expect = 1e-005
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 745 atcgaagccaggaggatggaccagacaatgacaatcgttggcgtcctgttctgcctccca 804
||||| |||||||||||||||||||| | | ||| |||||| | || | || |||||
Sbjct: 3162 atcgaggccaggaggatggaccagacgacaataatggttggcattctatcttgtttccca 3103
Query: 805 accagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaa 857
| || ||| || ||||||||||||||||| | ||| ||||||| |||||||||
Sbjct: 3102 agcaaacctttaaggaacgggtaaagatgaatgatgacccaaagtgcaaagaa 3050
>gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
mRNA, complete cds
Length = 3081
Score = 117 bits (59), Expect = 2e-023
Identities = 245/307 (79%)
Strand = Plus / Minus
Query: 2021 tgaagacacatccagtacccacataaattgggccctggataccatccaaacctttcatgt 2080
|||| ||||| |||||||| || |||| ||| || ||||| ||||| | ||||||||| |
Sbjct: 1798 tgaaaacacaaccagtaccaacgtaaactggaccttggattccatctagacctttcatat 1739
Query: 2081 tgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaa 2140
||||||| || ||||| |||||||| || || ||||| | ||||| |||||||
Sbjct: 1738 tgatatcaaagaagactgtgtttctgttggcgtaacgatcgtttgtgtcaatgccatcaa 1679
Query: 2141 atctttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatcataaaac 2200
| |||||||| ||||| |||||||| || |||||||||| | ||||||||||| |||||
Sbjct: 1678 acctttgagggaactgaacatagcagaccttctttccaatctgaggatccatcaaaaaac 1619
Query: 2201 acattgcttcctttatagccttactattattgatatagtgatcacaatccaagttcagca 2260
||||||||||| | | ||||| || || || | |||||||||||| |||||||||||||
Sbjct: 1618 acattgcttccctcacggccttgctgttgtttacatagtgatcacagtccaagttcagca 1559
Query: 2261 aataaggagcattagttagtacagcagagactcggaccaatgcattcatagcaccagcct 2320
|||||||||| || ||||| | | ||||| |||| |||||||| || ||||| |
Sbjct: 1558 tgaaaggagcatttgtgagtacgcctgccactcgaaccagggcattcatggcgccagctt 1499
Query: 2321 tcttgtg 2327
|||||||
Sbjct: 1498 tcttgtg 1492
Score = 63.9 bits (32), Expect = 2e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 2944 ataggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacag 3003
||||| |||||||| || ||||| |||||||||||||| | || ||||| |||||||||
Sbjct: 875 atagggaaccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacag 816
Query: 3004 atcacaga 3011
||||||||
Sbjct: 815 atcacaga 808
Score = 60.0 bits (30), Expect = 3e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
|||||||||||||| || ||||||||||||||||| || || |||| || || ||||||
Sbjct: 2633 cctccaatgacccagaattgctcgtttctccaccattcctcaatgctaactccgctccat 2574
Query: 1168 ctcatttcca 1177
|||| |||||
Sbjct: 2573 ctcaattcca 2564
Score = 54.0 bits (27), Expect = 2e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2530 ttgattctgaccttgaattcctcatactctctcttcattgctc 2572
||||| ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 1289 ttgatcctgaccttgaactcctcatattctctcttcatggctc 1247
Score = 52.0 bits (26), Expect = 7e-004
Identities = 89/110 (80%)
Strand = Plus / Minus
Query: 1480 gaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgc 1539
||||||||||| || | || ||||| ||||||||||| |||| ||| ||| |||| |||
Sbjct: 2258 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 2199
Query: 1540 atcttaaacccagtaagaatatcttctgtgactgatccataaatccaacc 1589
||||| || || || | |||||| ||||||| || ||||| ||||||||
Sbjct: 2198 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacc 2149
Score = 52.0 bits (26), Expect = 7e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 2827 ggaggttccttcaagggatcaaccgtactgacaaagaaatcaacaggggc 2876
||||| |||||||| || || |||||||||||||||| ||| ||||||||
Sbjct: 992 ggaggctccttcaatgggtccaccgtactgacaaagacatctacaggggc 943
>gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA, complete cds
Length = 3355
Score = 117 bits (59), Expect = 2e-023
Identities = 245/307 (79%)
Strand = Plus / Minus
Query: 2021 tgaagacacatccagtacccacataaattgggccctggataccatccaaacctttcatgt 2080
|||| ||||| |||||||| || |||| ||| || ||||| ||||| | ||||||||| |
Sbjct: 1843 tgaaaacacaaccagtaccaacgtaaactggaccttggattccatctagacctttcatat 1784
Query: 2081 tgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaa 2140
||||||| || ||||| |||||||| || || ||||| | ||||| |||||||
Sbjct: 1783 tgatatcaaagaagactgtgtttctgttggcgtaacgatcgtttgtgtcaatgccatcaa 1724
Query: 2141 atctttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatcataaaac 2200
| |||||||| ||||| |||||||| || |||||||||| | ||||||||||| |||||
Sbjct: 1723 acctttgagggaactgaacatagcagaccttctttccaatctgaggatccatcaaaaaac 1664
Query: 2201 acattgcttcctttatagccttactattattgatatagtgatcacaatccaagttcagca 2260
||||||||||| | | ||||| || || || | |||||||||||| |||||||||||||
Sbjct: 1663 acattgcttccctcacggccttgctgttgtttacatagtgatcacagtccaagttcagca 1604
Query: 2261 aataaggagcattagttagtacagcagagactcggaccaatgcattcatagcaccagcct 2320
|||||||||| || ||||| | | ||||| |||| |||||||| || ||||| |
Sbjct: 1603 tgaaaggagcatttgtgagtacgcctgccactcgaaccagggcattcatggcgccagctt 1544
Query: 2321 tcttgtg 2327
|||||||
Sbjct: 1543 tcttgtg 1537
Score = 63.9 bits (32), Expect = 2e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 2944 ataggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacag 3003
||||| |||||||| || ||||| |||||||||||||| | || ||||| |||||||||
Sbjct: 920 atagggaaccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacag 861
Query: 3004 atcacaga 3011
||||||||
Sbjct: 860 atcacaga 853
Score = 60.0 bits (30), Expect = 3e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
|||||||||||||| || ||||||||||||||||| || || |||| || || ||||||
Sbjct: 2678 cctccaatgacccagaattgctcgtttctccaccattcctcaatgctaactccgctccat 2619
Query: 1168 ctcatttcca 1177
|||| |||||
Sbjct: 2618 ctcaattcca 2609
Score = 54.0 bits (27), Expect = 2e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2530 ttgattctgaccttgaattcctcatactctctcttcattgctc 2572
||||| ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 1334 ttgatcctgaccttgaactcctcatattctctcttcatggctc 1292
Score = 52.0 bits (26), Expect = 7e-004
Identities = 89/110 (80%)
Strand = Plus / Minus
Query: 1480 gaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgc 1539
||||||||||| || | || ||||| ||||||||||| |||| ||| ||| |||| |||
Sbjct: 2303 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 2244
Query: 1540 atcttaaacccagtaagaatatcttctgtgactgatccataaatccaacc 1589
||||| || || || | |||||| ||||||| || ||||| ||||||||
Sbjct: 2243 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacc 2194
Score = 52.0 bits (26), Expect = 7e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 2827 ggaggttccttcaagggatcaaccgtactgacaaagaaatcaacaggggc 2876
||||| |||||||| || || |||||||||||||||| ||| ||||||||
Sbjct: 1037 ggaggctccttcaatgggtccaccgtactgacaaagacatctacaggggc 988
>emb|AX507835.1| Sequence 2530 from Patent WO0216655
Length = 3255
Score = 117 bits (59), Expect = 2e-023
Identities = 212/263 (80%)
Strand = Plus / Minus
Query: 2062 ccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatca 2121
||||||||||||||||| |||||||| || || |||||||| | || | ||||||||
Sbjct: 1871 ccatccaaacctttcatattgatatcaaagaacacaacattgcgatttgagtatcgatcg 1812
Query: 2122 tggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagc 2181
|| | |||||||||||| || |||||||| ||||| ||||| || | ||||||||| |
Sbjct: 1811 tgcctatcaatcccatcgaacctttgagggaactgaacataacagattttctttcctgac 1752
Query: 2182 aaaggatccatcataaaacacattgcttcctttatagccttactattattgatatagtga 2241
|||||||||||| |||||||||||||| | | ||| || ||||| ||||| ||||||
Sbjct: 1751 tgaggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtga 1692
Query: 2242 tcacaatccaagttcagcaaataaggagcattagttagtacagcagagactcggaccaat 2301
|||||||| | ||||| | ||||||||||| | ||| || |||||||||| | ||
Sbjct: 1691 tcacaatcgacattcagaaggtaaggagcatttgatagaaccccagagactcgtatcagg 1632
Query: 2302 gcattcatagcaccagccttctt 2324
| ||||||||| |||||||||||
Sbjct: 1631 gaattcatagctccagccttctt 1609
Score = 105 bits (53), Expect = 6e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 2635 taccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttcttt 2694
||||| || |||||||||||||||| | |||| | ||||||||||||||||||||| ||
Sbjct: 1298 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 1239
Query: 2695 gcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaa 2754
|| ||||||| || ||||| | ||||| || || ||||| |||||||||||||||||
Sbjct: 1238 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcagat 1179
Query: 2755 acgtagcacgaaaccttatcaactggataatccaccgaaaggatagatagaacagtatta 2814
||||| || | ||||||||| || |||||||| || | ||| ||||| | ||||||||
Sbjct: 1178 acgtaacaagcaaccttatcgacaggataatcaacagcaagaatagacaagacagtattt 1119
Query: 2815 gcagt 2819
|||||
Sbjct: 1118 gcagt 1114
Score = 89.7 bits (45), Expect = 3e-015
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 1027 gatgtcacagtgaagctcgtgtctacaccagctatgaccttgagtagtccctggaacaca 1086
||||| || |||||| | ||||| |||||||| | |||||||| || || ||||| | |
Sbjct: 2888 gatgtgactgtgaagttagtgtcgacaccagcaagaaccttgaggagaccttggaagaga 2829
Query: 1087 gcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtca 1146
||||| ||||| | ||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 2828 gcaaacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatca 2769
Query: 1147 tcgat 1151
|||||
Sbjct: 2768 tcgat 2764
Score = 87.7 bits (44), Expect = 1e-014
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 2413 ccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggccatggagtt 2472
|||||||| ||||||||||| ||||||||||| || ||| |||| |||||||| || ||
Sbjct: 1520 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 1461
Query: 2473 ccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattg 2532
|| || ||||| ||||| || |||||||| || || || ||| | || || || ||||||
Sbjct: 1460 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 1401
Query: 2533 attctgaccttgaattcctcatactctctcttcattgctctccgttctctaacaaa 2588
|| | || |||||||| ||||| ||||||||||| |||| ||| || ||||||||
Sbjct: 1400 atctttactttgaattcttcataatctctcttcatggctcgccgctccctaacaaa 1345
Score = 83.8 bits (42), Expect = 2e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 1524 ccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaat 1583
||||||||| | ||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 2391 ccaaccatgagaatgcatcttaaaacccgtaagaatatcttcggtaacagaaccatagat 2332
Query: 1584 ccaaccaatatcttttccccagcctgttttgtcttcatatccacaactgatgac 1637
||| ||||| ||||||||||| | ||||| ||||||||||| ||||| |||||
Sbjct: 2331 ccacccaatctcttttccccattcagttttatcttcatatccgcaactaatgac 2278
Score = 58.0 bits (29), Expect = 1e-005
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 745 atcgaagccaggaggatggaccagacaatgacaatcgttggcgtcctgttctgcctccca 804
||||| |||||||||||||||||||| | | ||| |||||| | || | || |||||
Sbjct: 3170 atcgaggccaggaggatggaccagacgacaataatggttggcattctatcttgtttccca 3111
Query: 805 accagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaa 857
| || ||| || ||||||||||||||||| | ||| ||||||| |||||||||
Sbjct: 3110 agcaaacctttaaggaacgggtaaagatgaatgatgacccaaagtgcaaagaa 3058
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1708 gatgcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| || | |||||| ||||||||||| |||||||||
Sbjct: 2207 gatgcaacaaatacaggagactgcccaaatttcttctccaacttc 2163
>gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene, complete cds
Length = 3081
Score = 117 bits (59), Expect = 2e-023
Identities = 245/307 (79%)
Strand = Plus / Minus
Query: 2021 tgaagacacatccagtacccacataaattgggccctggataccatccaaacctttcatgt 2080
|||| ||||| |||||||| || |||| ||| || ||||| ||||| | ||||||||| |
Sbjct: 1798 tgaaaacacaaccagtaccaacgtaaactggaccttggattccatctagacctttcatat 1739
Query: 2081 tgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaa 2140
||||||| || ||||| |||||||| || || ||||| | ||||| |||||||
Sbjct: 1738 tgatatcaaagaagactgtgtttctgttggcgtaacgatcgtttgtgtcaatgccatcaa 1679
Query: 2141 atctttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatcataaaac 2200
| |||||||| ||||| |||||||| || |||||||||| | ||||||||||| |||||
Sbjct: 1678 acctttgagggaactgaacatagcagaccttctttccaatctgaggatccatcaaaaaac 1619
Query: 2201 acattgcttcctttatagccttactattattgatatagtgatcacaatccaagttcagca 2260
||||||||||| | | ||||| || || || | |||||||||||| |||||||||||||
Sbjct: 1618 acattgcttccctcacggccttgctgttgtttacatagtgatcacagtccaagttcagca 1559
Query: 2261 aataaggagcattagttagtacagcagagactcggaccaatgcattcatagcaccagcct 2320
|||||||||| || ||||| | | ||||| |||| |||||||| || ||||| |
Sbjct: 1558 tgaaaggagcatttgtgagtacgcctgccactcgaaccagggcattcatggcgccagctt 1499
Query: 2321 tcttgtg 2327
|||||||
Sbjct: 1498 tcttgtg 1492
Score = 63.9 bits (32), Expect = 2e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 2944 ataggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacag 3003
||||| |||||||| || ||||| |||||||||||||| | || ||||| |||||||||
Sbjct: 875 atagggaaccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacag 816
Query: 3004 atcacaga 3011
||||||||
Sbjct: 815 atcacaga 808
Score = 60.0 bits (30), Expect = 3e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
|||||||||||||| || ||||||||||||||||| || || |||| || || ||||||
Sbjct: 2633 cctccaatgacccagaattgctcgtttctccaccattcctcaatgctaactccgctccat 2574
Query: 1168 ctcatttcca 1177
|||| |||||
Sbjct: 2573 ctcaattcca 2564
Score = 54.0 bits (27), Expect = 2e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2530 ttgattctgaccttgaattcctcatactctctcttcattgctc 2572
||||| ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 1289 ttgatcctgaccttgaactcctcatattctctcttcatggctc 1247
Score = 52.0 bits (26), Expect = 7e-004
Identities = 89/110 (80%)
Strand = Plus / Minus
Query: 1480 gaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgc 1539
||||||||||| || | || ||||| ||||||||||| |||| ||| ||| |||| |||
Sbjct: 2258 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 2199
Query: 1540 atcttaaacccagtaagaatatcttctgtgactgatccataaatccaacc 1589
||||| || || || | |||||| ||||||| || ||||| ||||||||
Sbjct: 2198 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacc 2149
Score = 52.0 bits (26), Expect = 7e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 2827 ggaggttccttcaagggatcaaccgtactgacaaagaaatcaacaggggc 2876
||||| |||||||| || || |||||||||||||||| ||| ||||||||
Sbjct: 992 ggaggctccttcaatgggtccaccgtactgacaaagacatctacaggggc 943
>emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH56ZA06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3911
Score = 117 bits (59), Expect = 2e-023
Identities = 212/263 (80%)
Strand = Plus / Minus
Query: 2062 ccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatca 2121
||||||||||||||||| |||||||| || || |||||||| | || | ||||||||
Sbjct: 2299 ccatccaaacctttcatattgatatcaaagaacacaacattgcgatttgagtatcgatcg 2240
Query: 2122 tggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagc 2181
|| | |||||||||||| || |||||||| ||||| ||||| || | ||||||||| |
Sbjct: 2239 tgcctatcaatcccatcgaacctttgagggaactgaacataacagattttctttcctgac 2180
Query: 2182 aaaggatccatcataaaacacattgcttcctttatagccttactattattgatatagtga 2241
|||||||||||| |||||||||||||| | | ||| || ||||| ||||| ||||||
Sbjct: 2179 tgaggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtga 2120
Query: 2242 tcacaatccaagttcagcaaataaggagcattagttagtacagcagagactcggaccaat 2301
|||||||| | ||||| | ||||||||||| | ||| || |||||||||| | ||
Sbjct: 2119 tcacaatcgacattcagaaggtaaggagcatttgatagaaccccagagactcgtatcagg 2060
Query: 2302 gcattcatagcaccagccttctt 2324
| ||||||||| |||||||||||
Sbjct: 2059 gaattcatagctccagccttctt 2037
Score = 105 bits (53), Expect = 6e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 2635 taccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttcttt 2694
||||| || |||||||||||||||| | |||| | ||||||||||||||||||||| ||
Sbjct: 1725 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 1666
Query: 2695 gcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaa 2754
|| ||||||| || ||||| | ||||| || || ||||| |||||||||||||||||
Sbjct: 1665 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcagat 1606
Query: 2755 acgtagcacgaaaccttatcaactggataatccaccgaaaggatagatagaacagtatta 2814
||||| || | ||||||||| || |||||||| || | ||| ||||| | ||||||||
Sbjct: 1605 acgtaacaagcaaccttatcgacaggataatcaacagcaagaatagacaagacagtattt 1546
Query: 2815 gcagt 2819
|||||
Sbjct: 1545 gcagt 1541
Score = 83.8 bits (42), Expect = 2e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 1524 ccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaat 1583
||||||||| | ||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 2819 ccaaccatgagaatgcatcttaaaacccgtaagaatatcttcggtaacagaaccatagat 2760
Query: 1584 ccaaccaatatcttttccccagcctgttttgtcttcatatccacaactgatgac 1637
||| ||||| ||||||||||| | ||||| ||||||||||| ||||| |||||
Sbjct: 2759 ccacccaatctcttttccccattcagttttatcttcatatccgcaactaatgac 2706
Score = 75.8 bits (38), Expect = 5e-011
Identities = 105/126 (83%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 1027 gatgtcacagtgaagctcgtgtctacaccagctatgaccttgagtagtccctggaacaca 1086
||||| || |||||| | ||||| |||||||| | |||||||| || || ||||| | |
Sbjct: 3317 gatgtgactgtgaagttagtgtcgacaccagcaagaaccttgaggagaccttggaagaga 3258
Query: 1087 gcaaagagatgtgaagacacgcctccaatgaccc-aaaactgctcgtttctccaccagtc 1145
||||| ||||| | ||| || ||||||||||||| ||||||| |||||||||||||| ||
Sbjct: 3257 gcaaacagatgcgcagaaacacctccaatgaccccaaaactgttcgtttctccaccaatc 3198
Query: 1146 atcgat 1151
||||||
Sbjct: 3197 atcgat 3192
Score = 52.0 bits (26), Expect = 7e-004
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 800 tcccaaccagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaa 857
|||||| || ||| || ||||||||||||||||| | ||| ||||||| |||||||||
Sbjct: 3544 tcccaagcaaacctttaaggaacgggtaaagatgaatgatgacccaaagtgcaaagaa 3487
Score = 52.0 bits (26), Expect = 7e-004
Identities = 143/178 (80%), Gaps = 3/178 (1%)
Strand = Plus / Minus
Query: 2413 ccaaggaaa-acctgaatcattccaggatgatcacggacattatttccgggccatggagt 2471
||||||||| |||||| |||| ||||||||||| || ||| |||| |||||||| || ||
Sbjct: 1948 ccaaggaaagacctgattcatgccaggatgatctcgcacactattaccgggccaaggtgt 1889
Query: 2472 tccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaaggcatt 2531
|| || ||||| ||||| || || ||||| || || || ||| | || || || |||||
Sbjct: 1888 accgtcttgcatagtccacccatcttcaggcactttctgtgctgttgctactaaagcatt 1829
Query: 2532 gattctgaccttgaa-ttcctcatactctctcttcattgctctccgttctctaacaaa 2588
|| ||| || ||||| ||| ||||| ||||||||||| |||| ||| || ||||||||
Sbjct: 1828 ga-tcttactttgaatttcttcataatctctcttcatggctcgccgctccctaacaaa 1772
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1708 gatgcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| || | |||||| ||||||||||| |||||||||
Sbjct: 2635 gatgcaacaaatacaggagactgcccaaatttcttctccaacttc 2591
>ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM 3); cellulose synthase
AT5G17420 (IRX3) mRNA, complete cds
Length = 3693
Score = 117 bits (59), Expect = 2e-023
Identities = 245/307 (79%)
Strand = Plus / Minus
Query: 2021 tgaagacacatccagtacccacataaattgggccctggataccatccaaacctttcatgt 2080
|||| ||||| |||||||| || |||| ||| || ||||| ||||| | ||||||||| |
Sbjct: 1843 tgaaaacacaaccagtaccaacgtaaactggaccttggattccatctagacctttcatat 1784
Query: 2081 tgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaa 2140
||||||| || ||||| |||||||| || || ||||| | ||||| |||||||
Sbjct: 1783 tgatatcaaagaagactgtgtttctgttggcgtaacgatcgtttgtgtcaatgccatcaa 1724
Query: 2141 atctttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatcataaaac 2200
| |||||||| ||||| |||||||| || |||||||||| | ||||||||||| |||||
Sbjct: 1723 acctttgagggaactgaacatagcagaccttctttccaatctgaggatccatcaaaaaac 1664
Query: 2201 acattgcttcctttatagccttactattattgatatagtgatcacaatccaagttcagca 2260
||||||||||| | | ||||| || || || | |||||||||||| |||||||||||||
Sbjct: 1663 acattgcttccctcacggccttgctgttgtttacatagtgatcacagtccaagttcagca 1604
Query: 2261 aataaggagcattagttagtacagcagagactcggaccaatgcattcatagcaccagcct 2320
|||||||||| || ||||| | | ||||| |||| |||||||| || ||||| |
Sbjct: 1603 tgaaaggagcatttgtgagtacgcctgccactcgaaccagggcattcatggcgccagctt 1544
Query: 2321 tcttgtg 2327
|||||||
Sbjct: 1543 tcttgtg 1537
Score = 63.9 bits (32), Expect = 2e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 2944 ataggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacag 3003
||||| |||||||| || ||||| |||||||||||||| | || ||||| |||||||||
Sbjct: 920 atagggaaccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacag 861
Query: 3004 atcacaga 3011
||||||||
Sbjct: 860 atcacaga 853
Score = 60.0 bits (30), Expect = 3e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
|||||||||||||| || ||||||||||||||||| || || |||| || || ||||||
Sbjct: 2678 cctccaatgacccagaattgctcgtttctccaccattcctcaatgctaactccgctccat 2619
Query: 1168 ctcatttcca 1177
|||| |||||
Sbjct: 2618 ctcaattcca 2609
Score = 54.0 bits (27), Expect = 2e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2530 ttgattctgaccttgaattcctcatactctctcttcattgctc 2572
||||| ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 1334 ttgatcctgaccttgaactcctcatattctctcttcatggctc 1292
Score = 52.0 bits (26), Expect = 7e-004
Identities = 89/110 (80%)
Strand = Plus / Minus
Query: 1480 gaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgc 1539
||||||||||| || | || ||||| ||||||||||| |||| ||| ||| |||| |||
Sbjct: 2303 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 2244
Query: 1540 atcttaaacccagtaagaatatcttctgtgactgatccataaatccaacc 1589
||||| || || || | |||||| ||||||| || ||||| ||||||||
Sbjct: 2243 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacc 2194
Score = 52.0 bits (26), Expect = 7e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 2827 ggaggttccttcaagggatcaaccgtactgacaaagaaatcaacaggggc 2876
||||| |||||||| || || |||||||||||||||| ||| ||||||||
Sbjct: 1037 ggaggctccttcaatgggtccaccgtactgacaaagacatctacaggggc 988
>ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNTHASE 6); transferase,
transferring glycosyl groups AT5G64740 (CESA6) mRNA,
complete cds
Length = 4105
Score = 117 bits (59), Expect = 2e-023
Identities = 212/263 (80%)
Strand = Plus / Minus
Query: 2062 ccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatca 2121
||||||||||||||||| |||||||| || || |||||||| | || | ||||||||
Sbjct: 2360 ccatccaaacctttcatattgatatcaaagaacacaacattgcgatttgagtatcgatcg 2301
Query: 2122 tggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagc 2181
|| | |||||||||||| || |||||||| ||||| ||||| || | ||||||||| |
Sbjct: 2300 tgcctatcaatcccatcgaacctttgagggaactgaacataacagattttctttcctgac 2241
Query: 2182 aaaggatccatcataaaacacattgcttcctttatagccttactattattgatatagtga 2241
|||||||||||| |||||||||||||| | | ||| || ||||| ||||| ||||||
Sbjct: 2240 tgaggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtga 2181
Query: 2242 tcacaatccaagttcagcaaataaggagcattagttagtacagcagagactcggaccaat 2301
|||||||| | ||||| | ||||||||||| | ||| || |||||||||| | ||
Sbjct: 2180 tcacaatcgacattcagaaggtaaggagcatttgatagaaccccagagactcgtatcagg 2121
Query: 2302 gcattcatagcaccagccttctt 2324
| ||||||||| |||||||||||
Sbjct: 2120 gaattcatagctccagccttctt 2098
Score = 105 bits (53), Expect = 6e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 2635 taccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttcttt 2694
||||| || |||||||||||||||| | |||| | ||||||||||||||||||||| ||
Sbjct: 1787 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 1728
Query: 2695 gcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaa 2754
|| ||||||| || ||||| | ||||| || || ||||| |||||||||||||||||
Sbjct: 1727 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcagat 1668
Query: 2755 acgtagcacgaaaccttatcaactggataatccaccgaaaggatagatagaacagtatta 2814
||||| || | ||||||||| || |||||||| || | ||| ||||| | ||||||||
Sbjct: 1667 acgtaacaagcaaccttatcgacaggataatcaacagcaagaatagacaagacagtattt 1608
Query: 2815 gcagt 2819
|||||
Sbjct: 1607 gcagt 1603
Score = 89.7 bits (45), Expect = 3e-015
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 1027 gatgtcacagtgaagctcgtgtctacaccagctatgaccttgagtagtccctggaacaca 1086
||||| || |||||| | ||||| |||||||| | |||||||| || || ||||| | |
Sbjct: 3377 gatgtgactgtgaagttagtgtcgacaccagcaagaaccttgaggagaccttggaagaga 3318
Query: 1087 gcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtca 1146
||||| ||||| | ||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 3317 gcaaacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatca 3258
Query: 1147 tcgat 1151
|||||
Sbjct: 3257 tcgat 3253
Score = 87.7 bits (44), Expect = 1e-014
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 2413 ccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggccatggagtt 2472
|||||||| ||||||||||| ||||||||||| || ||| |||| |||||||| || ||
Sbjct: 2009 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 1950
Query: 2473 ccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattg 2532
|| || ||||| ||||| || |||||||| || || || ||| | || || || ||||||
Sbjct: 1949 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 1890
Query: 2533 attctgaccttgaattcctcatactctctcttcattgctctccgttctctaacaaa 2588
|| | || |||||||| ||||| ||||||||||| |||| ||| || ||||||||
Sbjct: 1889 atctttactttgaattcttcataatctctcttcatggctcgccgctccctaacaaa 1834
Score = 83.8 bits (42), Expect = 2e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 1524 ccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaat 1583
||||||||| | ||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 2880 ccaaccatgagaatgcatcttaaaacccgtaagaatatcttcggtaacagaaccatagat 2821
Query: 1584 ccaaccaatatcttttccccagcctgttttgtcttcatatccacaactgatgac 1637
||| ||||| ||||||||||| | ||||| ||||||||||| ||||| |||||
Sbjct: 2820 ccacccaatctcttttccccattcagttttatcttcatatccgcaactaatgac 2767
Score = 58.0 bits (29), Expect = 1e-005
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 745 atcgaagccaggaggatggaccagacaatgacaatcgttggcgtcctgttctgcctccca 804
||||| |||||||||||||||||||| | | ||| |||||| | || | || |||||
Sbjct: 3659 atcgaggccaggaggatggaccagacgacaataatggttggcattctatcttgtttccca 3600
Query: 805 accagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaa 857
| || ||| || ||||||||||||||||| | ||| ||||||| |||||||||
Sbjct: 3599 agcaaacctttaaggaacgggtaaagatgaatgatgacccaaagtgcaaagaa 3547
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1708 gatgcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| || | |||||| ||||||||||| |||||||||
Sbjct: 2696 gatgcaacaaatacaggagactgcccaaatttcttctccaacttc 2652
>gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
gene, complete cds
Length = 7234
Score = 109 bits (55), Expect = 4e-021
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 2128 tcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaagga 2187
||||| |||||||| |||||||| ||||| |||||||| || |||||||||| | ||||
Sbjct: 2906 tcaatgccatcaaacctttgagggaactgaacatagcagaccttctttccaatctgagga 2847
Query: 2188 tccatcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaa 2247
||||||| |||||||||||||||| | | ||||| || || || | ||||||||||||
Sbjct: 2846 tccatcaaaaaacacattgcttccctcacggccttgctgttgtttacatagtgatcacag 2787
Query: 2248 tccaagttcagcaaataaggagcattagttagtac 2282
||||||||||||| |||||||||| || |||||
Sbjct: 2786 tccaagttcagcatgaaaggagcatttgtgagtac 2752
Score = 63.9 bits (32), Expect = 2e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 2944 ataggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacag 3003
||||| |||||||| || ||||| |||||||||||||| | || ||||| |||||||||
Sbjct: 1845 atagggaaccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacag 1786
Query: 3004 atcacaga 3011
||||||||
Sbjct: 1785 atcacaga 1778
Score = 60.0 bits (30), Expect = 3e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
|||||||||||||| || ||||||||||||||||| || || |||| || || ||||||
Sbjct: 4192 cctccaatgacccagaattgctcgtttctccaccattcctcaatgctaactccgctccat 4133
Query: 1168 ctcatttcca 1177
|||| |||||
Sbjct: 4132 ctcaattcca 4123
Score = 52.0 bits (26), Expect = 7e-004
Identities = 89/110 (80%)
Strand = Plus / Minus
Query: 1480 gaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgc 1539
||||||||||| || | || ||||| ||||||||||| |||| ||| ||| |||| |||
Sbjct: 3737 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 3678
Query: 1540 atcttaaacccagtaagaatatcttctgtgactgatccataaatccaacc 1589
||||| || || || | |||||| ||||||| || ||||| ||||||||
Sbjct: 3677 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacc 3628
Score = 52.0 bits (26), Expect = 7e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 2827 ggaggttccttcaagggatcaaccgtactgacaaagaaatcaacaggggc 2876
||||| |||||||| || || |||||||||||||||| ||| ||||||||
Sbjct: 2043 ggaggctccttcaatgggtccaccgtactgacaaagacatctacaggggc 1994
Score = 44.1 bits (22), Expect = 0.18
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 2530 ttgattctgaccttgaattcctcatactctctct 2563
||||| ||||||||||| |||||||| |||||||
Sbjct: 2427 ttgatcctgaccttgaactcctcatattctctct 2394
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 109 bits (55), Expect = 4e-021
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 2128 tcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaagga 2187
||||| |||||||| |||||||| ||||| |||||||| || |||||||||| | ||||
Sbjct: 5491568 tcaatgccatcaaacctttgagggaactgaacatagcagaccttctttccaatctgagga 5491627
Query: 2188 tccatcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaa 2247
||||||| |||||||||||||||| | | ||||| || || || | ||||||||||||
Sbjct: 5491628 tccatcaaaaaacacattgcttccctcacggccttgctgttgtttacatagtgatcacag 5491687
Query: 2248 tccaagttcagcaaataaggagcattagttagtac 2282
||||||||||||| |||||||||| || |||||
Sbjct: 5491688 tccaagttcagcatgaaaggagcatttgtgagtac 5491722
Score = 105 bits (53), Expect = 6e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 2635 taccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttcttt 2694
||||| || |||||||||||||||| | |||| | ||||||||||||||||||||| ||
Sbjct: 22908895 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 22908836
Query: 2695 gcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaa 2754
|| ||||||| || ||||| | ||||| || || ||||| |||||||||||||||||
Sbjct: 22908835 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcagat 22908776
Query: 2755 acgtagcacgaaaccttatcaactggataatccaccgaaaggatagatagaacagtatta 2814
||||| || | ||||||||| || |||||||| || | ||| ||||| | ||||||||
Sbjct: 22908775 acgtaacaagcaaccttatcgacaggataatcaacagcaagaatagacaagacagtattt 22908716
Query: 2815 gcagt 2819
|||||
Sbjct: 22908715 gcagt 22908711
Score = 95.6 bits (48), Expect = 6e-017
Identities = 138/168 (82%)
Strand = Plus / Minus
Query: 2127 atcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaagg 2186
|||||||||||| ||||||||||| || || ||||| |||| ||||||||| | |||
Sbjct: 2895215 atcaatcccatcgaatctttgagggaattgaacataacaaattttctttcccgactgagg 2895156
Query: 2187 atccatcataaaacacattgcttcctttatagccttactattattgatatagtgatcaca 2246
||||||||| |||||||||||||| | | ||| || ||||||||||| |||||||||||
Sbjct: 2895155 atccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatcaca 2895096
Query: 2247 atccaagttcagcaaataaggagcattagttagtacagcagagactcg 2294
||| | || || | |||||||||||| | ||| || ||||||||||
Sbjct: 2895095 atcgacatttagaagataaggagcatttgatagaactccagagactcg 2895048
Score = 89.7 bits (45), Expect = 3e-015
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 1027 gatgtcacagtgaagctcgtgtctacaccagctatgaccttgagtagtccctggaacaca 1086
||||| || |||||| | ||||| |||||||| | |||||||| || || ||||| | |
Sbjct: 22911279 gatgtgactgtgaagttagtgtcgacaccagcaagaaccttgaggagaccttggaagaga 22911220
Query: 1087 gcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtca 1146
||||| ||||| | ||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 22911219 gcaaacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatca 22911160
Query: 1147 tcgat 1151
|||||
Sbjct: 22911159 tcgat 22911155
Score = 89.7 bits (45), Expect = 3e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
|||||||||||||||||||||||||||||||| || || |||||||| |||||||| |||
Sbjct: 1459893 ccaatgacccaaaactgctcgtttctccaccattcgtctatgcctacgccactccacctc 1459952
Query: 1171 atttc 1175
|||||
Sbjct: 1459953 atttc 1459957
Score = 83.8 bits (42), Expect = 2e-013
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||||||| || | |||||||||||| || |||||||| ||||| ||||| || | ||||
Sbjct: 22909801 tatcgatcgtgcctatcaatcccatcgaacctttgagggaactgaacataacagattttc 22909742
Query: 2173 tttccaagcaaaggatccatcataaaacacattgcttcctttatagccttactattattg 2232
||||| | |||||||||||| |||||||||||||| | | ||| || ||||| |||
Sbjct: 22909741 tttcctgactgaggatccatcatgaaacacattgcttctctaagagctttgctattgttg 22909682
Query: 2233 atatagtgatcacaatccaagttcagcaaataaggagcattagttagtacagcagagact 2292
|| |||||||||||||| | ||||| | ||||||||||| | ||| || ||||||||
Sbjct: 22909681 atgtagtgatcacaatcgacattcagaaggtaaggagcatttgatagaaccccagagact 22909622
Query: 2293 cg 2294
||
Sbjct: 22909621 cg 22909620
Score = 73.8 bits (37), Expect = 2e-010
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 2674 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 2733
|||||||||||||||||| | ||||| || | |||||| || | |||||||| || |||
Sbjct: 2894374 cagaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaaagtaagc 2894315
Query: 2734 atggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaa 2793
|| |||||||||||||||||||| || || | ||| | || || |||||||| |||| |
Sbjct: 2894314 atagcagcaccatcatcagaaacataacaggcaactctgtctaccggataatcaaccgca 2894255
Query: 2794 aggatagatagaacagt 2810
|| ||||| ||||||||
Sbjct: 2894254 agaatagacagaacagt 2894238
Score = 71.9 bits (36), Expect = 8e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1086 agcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtc 1145
|||||||||||| | || || |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 2896634 agcaaagagatgagctgaaacacctccaatcacccaaaactgttcgtttctccaccaatc 2896575
Query: 1146 atcgatgcctac 1157
|||||| |||||
Sbjct: 2896574 atcgatccctac 2896563
Score = 71.9 bits (36), Expect = 8e-010
Identities = 150/188 (79%)
Strand = Plus / Plus
Query: 1405 ctgaagaaaatttcaattgaaccaagagcccaccgaagaacctggtgaagacgatcggaa 1464
||||||| ||| |||| |||||| | |||||||| || || |||| |||||||| |||
Sbjct: 1460342 ctgaagagaatctcaactgaacctaaagcccacctcagcacttggttcagacgatctgaa 1460401
Query: 1465 agattgagaggtgcggaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgc 1524
||||||| ||| || ||||| ||||| || | | ||||| ||||||||||| || |||
Sbjct: 1460402 agattgataggagcagaacccttgaaagctggaagcttaggcatgcagtaaatggatcgc 1460461
Query: 1525 caaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatc 1584
|| ||| || ||||| || |||||||| |||||||||||||| || || ||||| |||
Sbjct: 1460462 catccacgggcatgcattttgaacccagtcagaatatcttctgtcacagaaccatagatc 1460521
Query: 1585 caaccaat 1592
|| |||||
Sbjct: 1460522 catccaat 1460529
Score = 65.9 bits (33), Expect = 5e-008
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 1369 ccaccaccatacccataccagagagggcagtggttgctgaagaaaatttcaattgaacca 1428
||||| ||||| |||||||| | ||| || || |||| |||||||| |||| || ||
Sbjct: 2896214 ccacctccataaccataccaaataggacaatgtctgctcaagaaaatctcaacagacccg 2896155
Query: 1429 agagcccaccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctttg 1488
|| |||||||||||||| || |||||||| || |||||||||| |||||| || |||||
Sbjct: 2896154 agcgcccaccgaagaacttgatgaagacggtcagaaagattgataggtgctgatccttta 2896095
Query: 1489 aaggc 1493
|||||
Sbjct: 2896094 aaggc 2896090
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 2632 aagtaccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttc 2691
|||||||| ||||| ||||||||||| | ||||||| | ||||| || || ||||||||
Sbjct: 1462176 aagtaccattctggtgcacgaggctctatgctatatttcttgcaaaatggtacccattta 1462235
Query: 2692 tttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatca 2751
||||| || |||||||| | | || |||||||| | ||| |||||||||||||||
Sbjct: 1462236 cgagcaaactctgatgtttctgcaagtgattcaaatgataacatagcagcaccatcatca 1462295
Query: 2752 gaaacgtagcacgaaaccttatcaactgg 2780
||||| || || || ||||| ||||||||
Sbjct: 1462296 gaaacataacaggacaccttgtcaactgg 1462324
Score = 63.9 bits (32), Expect = 2e-007
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 2944 ataggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacag 3003
||||| |||||||| || ||||| |||||||||||||| | || ||||| |||||||||
Sbjct: 5492629 atagggaaccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacag 5492688
Query: 3004 atcacaga 3011
||||||||
Sbjct: 5492689 atcacaga 5492696
Score = 60.0 bits (30), Expect = 3e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
||||||||||| ||||||||||| || ||| |||| |||||||| || || || || |||
Sbjct: 22909295 acctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgtaccgtcttgc 22909236
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||||| || |||||||| || || || ||| | || || || |||||||| | ||
Sbjct: 22909235 atagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattgatctttact 22909176
Query: 2542 ttgaattcctcatactctctct 2563
|||||||| ||||| |||||||
Sbjct: 22909175 ttgaattcttcataatctctct 22909154
Score = 60.0 bits (30), Expect = 3e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
||||||||||| || ||||||||||| ||||| || |||||||| || ||||| |||
Sbjct: 16109285 acctgaatcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatcttgc 16109226
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||| ||||| ||||| |||||| |||||||| || || |||||||| || ||
Sbjct: 16109225 ataacccaaccttcttcaggcttcttttgagctttagctactaaagcattgatcctcact 16109166
Query: 2542 ttgaattcctcatactctctct 2563
|||||||| ||||| |||||||
Sbjct: 16109165 ttgaattcttcatattctctct 16109144
Score = 60.0 bits (30), Expect = 3e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
|||||||||||||| || ||||||||||||||||| || || |||| || || ||||||
Sbjct: 5490282 cctccaatgacccagaattgctcgtttctccaccattcctcaatgctaactccgctccat 5490341
Query: 1168 ctcatttcca 1177
|||| |||||
Sbjct: 5490342 ctcaattcca 5490351
Score = 60.0 bits (30), Expect = 3e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
||||| ||||| ||||| ||||| || || ||||| |||||||| ||||| || || |||
Sbjct: 2894714 acctggatcatgccagggtgatctcgcacgttattaccgggccaaggagtaccgtcttgc 2894655
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||||| ||||| ||||| || || || || | ||||| || |||||||| | |||
Sbjct: 2894654 atagtccaaccttcttcaggcactttctgtgcagtcgcaactaaagcattgatcttaacc 2894595
Query: 2542 ttgaattcctcatactctctct 2563
|||||||| ||||| |||||||
Sbjct: 2894594 ttgaattcttcataatctctct 2894573
Score = 58.0 bits (29), Expect = 1e-005
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 745 atcgaagccaggaggatggaccagacaatgacaatcgttggcgtcctgttctgcctccca 804
||||| |||||||||||||||||||| | | ||| |||||| | || | || |||||
Sbjct: 22911561 atcgaggccaggaggatggaccagacgacaataatggttggcattctatcttgtttccca 22911502
Query: 805 accagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaa 857
| || ||| || ||||||||||||||||| | ||| ||||||| |||||||||
Sbjct: 22911501 agcaaacctttaaggaacgggtaaagatgaatgatgacccaaagtgcaaagaa 22911449
Score = 58.0 bits (29), Expect = 1e-005
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1544 taaacccagtaagaatatcttctgtgactgatccataaatccaaccaat 1592
|||| ||||| || ||||||||||| ||||||||||||||||| |||||
Sbjct: 16111022 taaatccagtgaggatatcttctgttactgatccataaatccatccaat 16110974
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 2946 aggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacagat 3005
|||||||||||| |||||||| || | |||||| || | ||||||||| || ||||| ||
Sbjct: 1462590 aggaaaccacttgggaaactgatccaaaatccaggataaggcaaaccagatctcacatat 1462649
Query: 3006 cacagatatgagccataaagcaaatgcat 3034
|||||| | ||||||| |||||| ||||
Sbjct: 1462650 cacagagaccagccatagagcaaaggcat 1462678
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 2296 accaatgcattcatagcaccagccttcttgtgatggttgtagcctggccgtttttctctt 2355
|||| ||||||||||||||||||||| ||||| || | | | ||||| || |||||||
Sbjct: 1461672 accagtgcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcga 1461731
Query: 2356 gaaacataaaccaatcgaggcagctcatt 2384
|||||||| ||||| || || ||||||||
Sbjct: 1461732 gaaacatataccaaacgcgggagctcatt 1461760
Score = 56.0 bits (28), Expect = 5e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 2743 ccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaaaggatagat 2802
||||||||||| || ||||| |||| ||| ||||| ||||| ||| | | ||| ||||||
Sbjct: 5326014 ccatcatcagatacatagcaagaaagcttctcaacaggatattccgcagcaagaatagat 5325955
Query: 2803 agaacagtattagcagtgaccaatggaggttc 2834
| || |||||||||||||||| ||||||||
Sbjct: 5325954 aaaatggtattagcagtgaccagaggaggttc 5325923
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccacca 1142
|||||||||| ||||||||| ||||||||||||||
Sbjct: 5327818 cctccaatgagccaaaactgttcgtttctccacca 5327784
Score = 52.0 bits (26), Expect = 7e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 2827 ggaggttccttcaagggatcaaccgtactgacaaagaaatcaacaggggc 2876
||||| |||||||| || || |||||||||||||||| ||| ||||||||
Sbjct: 5492431 ggaggctccttcaatgggtccaccgtactgacaaagacatctacaggggc 5492480
Score = 52.0 bits (26), Expect = 7e-004
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 1480 gaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgc 1539
||||||||||| || | || ||||| ||||||||||| |||| ||| ||| |||| |||
Sbjct: 5490737 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 5490796
Query: 1540 atcttaaacccagtaagaatatcttctgtgactgatccataaatccaacc 1589
||||| || || || | |||||| ||||||| || ||||| ||||||||
Sbjct: 5490797 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacc 5490846
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1524 ccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaat 1583
||||||||| | ||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 22910622 ccaaccatgagaatgcatcttaaaacccgtaagaatatcttcggtaacagaaccatagat 22910563
Query: 1584 ccaaccaat 1592
||| |||||
Sbjct: 22910562 ccacccaat 22910554
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1708 gatgcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| || | |||||| ||||||||||| |||||||||
Sbjct: 22910356 gatgcaacaaatacaggagactgcccaaatttcttctccaacttc 22910312
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 1594 tcttttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttc 1653
||||||||||| | ||||| ||||| ||||||||||| ||||| || || ||||| |
Sbjct: 2895891 tcttttccccattcggttttatcttcgtatccacaactaatgacttggatggcttctcta 2895832
Query: 1654 agaagagaagctggact 1670
|| ||||||||||||||
Sbjct: 2895831 agcagagaagctggact 2895815
Score = 48.1 bits (24), Expect = 0.012
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 800 tcccaaccagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaaga 859
|||||| |||||| || ||||| || || ||||||| ||| |||||||| |||||||| |
Sbjct: 2896920 tcccaagcagacctttaaggaaaggatatagatggaggatgacccaaaaggcaaagaaca 2896861
Query: 860 gcttcccgaacagggggccccatgattcatatccgttgttgatcgcat 907
| ||||| || || ||||| || ||||||||||| |||||||||
Sbjct: 2896860 atcttccgaaaagaggaccccacgagtcatatccgttactgatcgcat 2896813
Score = 44.1 bits (22), Expect = 0.18
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2530 ttgattctgaccttgaattcctcatactctctct 2563
||||| ||||||||||| |||||||| |||||||
Sbjct: 5492047 ttgatcctgaccttgaactcctcatattctctct 5492080
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1711 gcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| | |||||| ||||| ||||| |||||||||
Sbjct: 2895774 gcaacaaaaacaggagactgtccaaacttcttctccaacttc 2895733
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project)
Length = 33563
Score = 109 bits (55), Expect = 4e-021
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 2128 tcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaagga 2187
||||| |||||||| |||||||| ||||| |||||||| || |||||||||| | ||||
Sbjct: 22397 tcaatgccatcaaacctttgagggaactgaacatagcagaccttctttccaatctgagga 22456
Query: 2188 tccatcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaa 2247
||||||| |||||||||||||||| | | ||||| || || || | ||||||||||||
Sbjct: 22457 tccatcaaaaaacacattgcttccctcacggccttgctgttgtttacatagtgatcacag 22516
Query: 2248 tccaagttcagcaaataaggagcattagttagtac 2282
||||||||||||| |||||||||| || |||||
Sbjct: 22517 tccaagttcagcatgaaaggagcatttgtgagtac 22551
Score = 63.9 bits (32), Expect = 2e-007
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 2944 ataggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacag 3003
||||| |||||||| || ||||| |||||||||||||| | || ||||| |||||||||
Sbjct: 23458 atagggaaccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacag 23517
Query: 3004 atcacaga 3011
||||||||
Sbjct: 23518 atcacaga 23525
Score = 60.0 bits (30), Expect = 3e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
|||||||||||||| || ||||||||||||||||| || || |||| || || ||||||
Sbjct: 21111 cctccaatgacccagaattgctcgtttctccaccattcctcaatgctaactccgctccat 21170
Query: 1168 ctcatttcca 1177
|||| |||||
Sbjct: 21171 ctcaattcca 21180
Score = 52.0 bits (26), Expect = 7e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 2827 ggaggttccttcaagggatcaaccgtactgacaaagaaatcaacaggggc 2876
||||| |||||||| || || |||||||||||||||| ||| ||||||||
Sbjct: 23260 ggaggctccttcaatgggtccaccgtactgacaaagacatctacaggggc 23309
Score = 52.0 bits (26), Expect = 7e-004
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 1480 gaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgc 1539
||||||||||| || | || ||||| ||||||||||| |||| ||| ||| |||| |||
Sbjct: 21566 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 21625
Query: 1540 atcttaaacccagtaagaatatcttctgtgactgatccataaatccaacc 1589
||||| || || || | |||||| ||||||| || ||||| ||||||||
Sbjct: 21626 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacc 21675
Score = 44.1 bits (22), Expect = 0.18
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2530 ttgattctgaccttgaattcctcatactctctct 2563
||||| ||||||||||| |||||||| |||||||
Sbjct: 22876 ttgatcctgaccttgaactcctcatattctctct 22909
>ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNTHASE 5); transferase,
transferring glycosyl groups AT5G09870 (CESA5) mRNA,
complete cds
Length = 3210
Score = 109 bits (55), Expect = 4e-021
Identities = 217/271 (80%)
Strand = Plus / Minus
Query: 2062 ccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatca 2121
||||||||||||||||| || |||||||| || |||||||| | |||| |||| |||
Sbjct: 1835 ccatccaaacctttcatattaatatcgaagaatacaacattacgattagagtatctgtca 1776
Query: 2122 tggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagc 2181
|||||||||||| ||||||||||| || || ||||| |||| ||||||||| |
Sbjct: 1775 cttttatcaatcccatcgaatctttgagggaattgaacataacaaattttctttcccgac 1716
Query: 2182 aaaggatccatcataaaacacattgcttcctttatagccttactattattgatatagtga 2241
|||||||||||| |||||||||||||| | | ||| || ||||||||||| ||||||
Sbjct: 1715 tgaggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtga 1656
Query: 2242 tcacaatccaagttcagcaaataaggagcattagttagtacagcagagactcggaccaat 2301
|||||||| | || || | |||||||||||| | ||| || |||||||||| | ||
Sbjct: 1655 tcacaatcgacatttagaagataaggagcatttgatagaactccagagactcgtatcagg 1596
Query: 2302 gcattcatagcaccagccttcttgtgatggt 2332
| ||||| || |||||||||||||||||||
Sbjct: 1595 gagttcatggctccagccttcttgtgatggt 1565
Score = 91.7 bits (46), Expect = 9e-016
Identities = 238/302 (78%)
Strand = Plus / Minus
Query: 1369 ccaccaccatacccataccagagagggcagtggttgctgaagaaaatttcaattgaacca 1428
||||| ||||| |||||||| | ||| || || |||| |||||||| |||| || ||
Sbjct: 2501 ccacctccataaccataccaaataggacaatgtctgctcaagaaaatctcaacagacccg 2442
Query: 1429 agagcccaccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctttg 1488
|| |||||||||||||| || |||||||| || |||||||||| |||||| || |||||
Sbjct: 2441 agcgcccaccgaagaacttgatgaagacggtcagaaagattgataggtgctgatccttta 2382
Query: 1489 aaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgcatcttaaac 1548
||||| | |||||| | ||||||| || | ||| ||||| | |||||||| ||
Sbjct: 2381 aaggccggtatcttaggtgtacagtaaaccgatctccagccatgagaatgcatcttgaaa 2322
Query: 1549 ccagtaagaatatcttctgtgactgatccataaatccaaccaatatcttttccccagcct 1608
|| ||||| ||||| || ||||| || || || ||||| ||||| ||||||||||| |
Sbjct: 2321 cccgtaaggatatcctcggtgacagaaccgtagatccacccaatctcttttccccattcg 2262
Query: 1609 gttttgtcttcatatccacaactgatgacatgtatagcttccttcagaagagaagctgga 1668
||||| ||||| ||||||||||| ||||| || || ||||| | || ||||||||||||
Sbjct: 2261 gttttatcttcgtatccacaactaatgacttggatggcttctctaagcagagaagctgga 2202
Query: 1669 ct 1670
||
Sbjct: 2201 ct 2200
Score = 87.7 bits (44), Expect = 1e-014
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 2413 ccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggccatggagtt 2472
|||||||| ||||| ||||| ||||| ||||| || || ||||| |||||||| |||||
Sbjct: 1484 ccaaggaatacctggatcatgccagggtgatctcgcacgttattaccgggccaaggagta 1425
Query: 2473 ccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattg 2532
|| || ||||| ||||| ||||| ||||| || || || || | ||||| || ||||||
Sbjct: 1424 ccgtcttgcatagtccaaccttcttcaggcactttctgtgcagtcgcaactaaagcattg 1365
Query: 2533 attctgaccttgaattcctcatactctctcttcattgctctccgttctctaacaaa 2588
|| | ||||||||||| ||||| ||||||||||| |||| ||||| ||||||||
Sbjct: 1364 atcttaaccttgaattcttcataatctctcttcatggctcggcgttccctaacaaa 1309
Score = 73.8 bits (37), Expect = 2e-010
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 2674 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 2733
|||||||||||||||||| | ||||| || | |||||| || | |||||||| || |||
Sbjct: 1223 cagaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaaagtaagc 1164
Query: 2734 atggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaa 2793
|| |||||||||||||||||||| || || | ||| | || || |||||||| |||| |
Sbjct: 1163 atagcagcaccatcatcagaaacataacaggcaactctgtctaccggataatcaaccgca 1104
Query: 2794 aggatagatagaacagt 2810
|| ||||| ||||||||
Sbjct: 1103 agaatagacagaacagt 1087
Score = 71.9 bits (36), Expect = 8e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1086 agcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtc 1145
|||||||||||| | || || |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 2784 agcaaagagatgagctgaaacacctccaatcacccaaaactgttcgtttctccaccaatc 2725
Query: 1146 atcgatgcctac 1157
|||||| |||||
Sbjct: 2724 atcgatccctac 2713
Score = 48.1 bits (24), Expect = 0.012
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 800 tcccaaccagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaaga 859
|||||| |||||| || ||||| || || ||||||| ||| |||||||| |||||||| |
Sbjct: 3070 tcccaagcagacctttaaggaaaggatatagatggaggatgacccaaaaggcaaagaaca 3011
Query: 860 gcttcccgaacagggggccccatgattcatatccgttgttgatcgcat 907
| ||||| || || ||||| || ||||||||||| |||||||||
Sbjct: 3010 atcttccgaaaagaggaccccacgagtcatatccgttactgatcgcat 2963
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1711 gcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| | |||||| ||||| ||||| |||||||||
Sbjct: 2159 gcaacaaaaacaggagactgtccaaacttcttctccaacttc 2118
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 109 bits (55), Expect = 4e-021
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 2128 tcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaagga 2187
||||| |||||||| |||||||| ||||| |||||||| || |||||||||| | ||||
Sbjct: 5738595 tcaatgccatcaaacctttgagggaactgaacatagcagaccttctttccaatctgagga 5738654
Query: 2188 tccatcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaa 2247
||||||| |||||||||||||||| | | ||||| || || || | ||||||||||||
Sbjct: 5738655 tccatcaaaaaacacattgcttccctcacggccttgctgttgtttacatagtgatcacag 5738714
Query: 2248 tccaagttcagcaaataaggagcattagttagtac 2282
||||||||||||| |||||||||| || |||||
Sbjct: 5738715 tccaagttcagcatgaaaggagcatttgtgagtac 5738749
Score = 105 bits (53), Expect = 6e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 2635 taccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttcttt 2694
||||| || |||||||||||||||| | |||| | ||||||||||||||||||||| ||
Sbjct: 25900808 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 25900749
Query: 2695 gcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaa 2754
|| ||||||| || ||||| | ||||| || || ||||| |||||||||||||||||
Sbjct: 25900748 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcagat 25900689
Query: 2755 acgtagcacgaaaccttatcaactggataatccaccgaaaggatagatagaacagtatta 2814
||||| || | ||||||||| || |||||||| || | ||| ||||| | ||||||||
Sbjct: 25900688 acgtaacaagcaaccttatcgacaggataatcaacagcaagaatagacaagacagtattt 25900629
Query: 2815 gcagt 2819
|||||
Sbjct: 25900628 gcagt 25900624
Score = 95.6 bits (48), Expect = 6e-017
Identities = 138/168 (82%)
Strand = Plus / Minus
Query: 2127 atcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaagg 2186
|||||||||||| ||||||||||| || || ||||| |||| ||||||||| | |||
Sbjct: 3076130 atcaatcccatcgaatctttgagggaattgaacataacaaattttctttcccgactgagg 3076071
Query: 2187 atccatcataaaacacattgcttcctttatagccttactattattgatatagtgatcaca 2246
||||||||| |||||||||||||| | | ||| || ||||||||||| |||||||||||
Sbjct: 3076070 atccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatcaca 3076011
Query: 2247 atccaagttcagcaaataaggagcattagttagtacagcagagactcg 2294
||| | || || | |||||||||||| | ||| || ||||||||||
Sbjct: 3076010 atcgacatttagaagataaggagcatttgatagaactccagagactcg 3075963
Score = 89.7 bits (45), Expect = 3e-015
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 1027 gatgtcacagtgaagctcgtgtctacaccagctatgaccttgagtagtccctggaacaca 1086
||||| || |||||| | ||||| |||||||| | |||||||| || || ||||| | |
Sbjct: 25903192 gatgtgactgtgaagttagtgtcgacaccagcaagaaccttgaggagaccttggaagaga 25903133
Query: 1087 gcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtca 1146
||||| ||||| | ||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 25903132 gcaaacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatca 25903073
Query: 1147 tcgat 1151
|||||
Sbjct: 25903072 tcgat 25903068
Score = 89.7 bits (45), Expect = 3e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
|||||||||||||||||||||||||||||||| || || |||||||| |||||||| |||
Sbjct: 1530856 ccaatgacccaaaactgctcgtttctccaccattcgtctatgcctacgccactccacctc 1530915
Query: 1171 atttc 1175
|||||
Sbjct: 1530916 atttc 1530920
Score = 83.8 bits (42), Expect = 2e-013
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||||||| || | |||||||||||| || |||||||| ||||| ||||| || | ||||
Sbjct: 25901714 tatcgatcgtgcctatcaatcccatcgaacctttgagggaactgaacataacagattttc 25901655
Query: 2173 tttccaagcaaaggatccatcataaaacacattgcttcctttatagccttactattattg 2232
||||| | |||||||||||| |||||||||||||| | | ||| || ||||| |||
Sbjct: 25901654 tttcctgactgaggatccatcatgaaacacattgcttctctaagagctttgctattgttg 25901595
Query: 2233 atatagtgatcacaatccaagttcagcaaataaggagcattagttagtacagcagagact 2292
|| |||||||||||||| | ||||| | ||||||||||| | ||| || ||||||||
Sbjct: 25901594 atgtagtgatcacaatcgacattcagaaggtaaggagcatttgatagaaccccagagact 25901535
Query: 2293 cg 2294
||
Sbjct: 25901534 cg 25901533
Score = 73.8 bits (37), Expect = 2e-010
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 2674 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 2733
|||||||||||||||||| | ||||| || | |||||| || | |||||||| || |||
Sbjct: 3075289 cagaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaaagtaagc 3075230
Query: 2734 atggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaa 2793
|| |||||||||||||||||||| || || | ||| | || || |||||||| |||| |
Sbjct: 3075229 atagcagcaccatcatcagaaacataacaggcaactctgtctaccggataatcaaccgca 3075170
Query: 2794 aggatagatagaacagt 2810
|| ||||| ||||||||
Sbjct: 3075169 agaatagacagaacagt 3075153
Score = 71.9 bits (36), Expect = 8e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1086 agcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtc 1145
|||||||||||| | || || |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 3077549 agcaaagagatgagctgaaacacctccaatcacccaaaactgttcgtttctccaccaatc 3077490
Query: 1146 atcgatgcctac 1157
|||||| |||||
Sbjct: 3077489 atcgatccctac 3077478
Score = 71.9 bits (36), Expect = 8e-010
Identities = 150/188 (79%)
Strand = Plus / Plus
Query: 1405 ctgaagaaaatttcaattgaaccaagagcccaccgaagaacctggtgaagacgatcggaa 1464
||||||| ||| |||| |||||| | |||||||| || || |||| |||||||| |||
Sbjct: 1531305 ctgaagagaatctcaactgaacctaaagcccacctcagcacttggttcagacgatctgaa 1531364
Query: 1465 agattgagaggtgcggaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgc 1524
||||||| ||| || ||||| ||||| || | | ||||| ||||||||||| || |||
Sbjct: 1531365 agattgataggagcagaacccttgaaagctggaagcttaggcatgcagtaaatggatcgc 1531424
Query: 1525 caaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatc 1584
|| ||| || ||||| || |||||||| |||||||||||||| || || ||||| |||
Sbjct: 1531425 catccacgggcatgcattttgaacccagtcagaatatcttctgtcacagaaccatagatc 1531484
Query: 1585 caaccaat 1592
|| |||||
Sbjct: 1531485 catccaat 1531492
Score = 65.9 bits (33), Expect = 5e-008
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 1369 ccaccaccatacccataccagagagggcagtggttgctgaagaaaatttcaattgaacca 1428
||||| ||||| |||||||| | ||| || || |||| |||||||| |||| || ||
Sbjct: 3077129 ccacctccataaccataccaaataggacaatgtctgctcaagaaaatctcaacagacccg 3077070
Query: 1429 agagcccaccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctttg 1488
|| |||||||||||||| || |||||||| || |||||||||| |||||| || |||||
Sbjct: 3077069 agcgcccaccgaagaacttgatgaagacggtcagaaagattgataggtgctgatccttta 3077010
Query: 1489 aaggc 1493
|||||
Sbjct: 3077009 aaggc 3077005
Score = 65.9 bits (33), Expect = 5e-008
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 2632 aagtaccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttc 2691
|||||||| ||||| ||||||||||| | ||||||| | ||||| || || ||||||||
Sbjct: 1533139 aagtaccattctggtgcacgaggctctatgctatatttcttgcaaaatggtacccattta 1533198
Query: 2692 tttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatca 2751
||||| || |||||||| | | || |||||||| | ||| |||||||||||||||
Sbjct: 1533199 cgagcaaactctgatgtttctgcaagtgattcaaatgataacatagcagcaccatcatca 1533258
Query: 2752 gaaacgtagcacgaaaccttatcaactgg 2780
||||| || || || ||||| ||||||||
Sbjct: 1533259 gaaacataacaggacaccttgtcaactgg 1533287
Score = 63.9 bits (32), Expect = 2e-007
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 2944 ataggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacag 3003
||||| |||||||| || ||||| |||||||||||||| | || ||||| |||||||||
Sbjct: 5739656 atagggaaccacttggggaactgatcaagaatccaagagacagcgaaccagatttcacag 5739715
Query: 3004 atcacaga 3011
||||||||
Sbjct: 5739716 atcacaga 5739723
Score = 60.0 bits (30), Expect = 3e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
||||||||||| ||||||||||| || ||| |||| |||||||| || || || || |||
Sbjct: 25901208 acctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgtaccgtcttgc 25901149
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||||| || |||||||| || || || ||| | || || || |||||||| | ||
Sbjct: 25901148 atagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattgatctttact 25901089
Query: 2542 ttgaattcctcatactctctct 2563
|||||||| ||||| |||||||
Sbjct: 25901088 ttgaattcttcataatctctct 25901067
Score = 60.0 bits (30), Expect = 3e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
||||||||||| || ||||||||||| ||||| || |||||||| || ||||| |||
Sbjct: 17733791 acctgaatcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatcttgc 17733732
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||| ||||| ||||| |||||| |||||||| || || |||||||| || ||
Sbjct: 17733731 ataacccaaccttcttcaggcttcttttgagctttagctactaaagcattgatcctcact 17733672
Query: 2542 ttgaattcctcatactctctct 2563
|||||||| ||||| |||||||
Sbjct: 17733671 ttgaattcttcatattctctct 17733650
Score = 60.0 bits (30), Expect = 3e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
|||||||||||||| || ||||||||||||||||| || || |||| || || ||||||
Sbjct: 5737309 cctccaatgacccagaattgctcgtttctccaccattcctcaatgctaactccgctccat 5737368
Query: 1168 ctcatttcca 1177
|||| |||||
Sbjct: 5737369 ctcaattcca 5737378
Score = 60.0 bits (30), Expect = 3e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
||||| ||||| ||||| ||||| || || ||||| |||||||| ||||| || || |||
Sbjct: 3075629 acctggatcatgccagggtgatctcgcacgttattaccgggccaaggagtaccgtcttgc 3075570
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||||| ||||| ||||| || || || || | ||||| || |||||||| | |||
Sbjct: 3075569 atagtccaaccttcttcaggcactttctgtgcagtcgcaactaaagcattgatcttaacc 3075510
Query: 2542 ttgaattcctcatactctctct 2563
|||||||| ||||| |||||||
Sbjct: 3075509 ttgaattcttcataatctctct 3075488
Score = 58.0 bits (29), Expect = 1e-005
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 745 atcgaagccaggaggatggaccagacaatgacaatcgttggcgtcctgttctgcctccca 804
||||| |||||||||||||||||||| | | ||| |||||| | || | || |||||
Sbjct: 25903474 atcgaggccaggaggatggaccagacgacaataatggttggcattctatcttgtttccca 25903415
Query: 805 accagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaa 857
| || ||| || ||||||||||||||||| | ||| ||||||| |||||||||
Sbjct: 25903414 agcaaacctttaaggaacgggtaaagatgaatgatgacccaaagtgcaaagaa 25903362
Score = 58.0 bits (29), Expect = 1e-005
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 1544 taaacccagtaagaatatcttctgtgactgatccataaatccaaccaat 1592
|||| ||||| || ||||||||||| ||||||||||||||||| |||||
Sbjct: 17735528 taaatccagtgaggatatcttctgttactgatccataaatccatccaat 17735480
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 2946 aggaaaccactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacagat 3005
|||||||||||| |||||||| || | |||||| || | ||||||||| || ||||| ||
Sbjct: 1533553 aggaaaccacttgggaaactgatccaaaatccaggataaggcaaaccagatctcacatat 1533612
Query: 3006 cacagatatgagccataaagcaaatgcat 3034
|||||| | ||||||| |||||| ||||
Sbjct: 1533613 cacagagaccagccatagagcaaaggcat 1533641
Score = 58.0 bits (29), Expect = 1e-005
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 2296 accaatgcattcatagcaccagccttcttgtgatggttgtagcctggccgtttttctctt 2355
|||| ||||||||||||||||||||| ||||| || | | | ||||| || |||||||
Sbjct: 1532635 accagtgcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcga 1532694
Query: 2356 gaaacataaaccaatcgaggcagctcatt 2384
|||||||| ||||| || || ||||||||
Sbjct: 1532695 gaaacatataccaaacgcgggagctcatt 1532723
Score = 56.0 bits (28), Expect = 5e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 2743 ccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaaaggatagat 2802
||||||||||| || ||||| |||| ||| ||||| ||||| ||| | | ||| ||||||
Sbjct: 5563041 ccatcatcagatacatagcaagaaagcttctcaacaggatattccgcagcaagaatagat 5562982
Query: 2803 agaacagtattagcagtgaccaatggaggttc 2834
| || |||||||||||||||| ||||||||
Sbjct: 5562981 aaaatggtattagcagtgaccagaggaggttc 5562950
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccacca 1142
|||||||||| ||||||||| ||||||||||||||
Sbjct: 5564845 cctccaatgagccaaaactgttcgtttctccacca 5564811
Score = 52.0 bits (26), Expect = 7e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 2827 ggaggttccttcaagggatcaaccgtactgacaaagaaatcaacaggggc 2876
||||| |||||||| || || |||||||||||||||| ||| ||||||||
Sbjct: 5739458 ggaggctccttcaatgggtccaccgtactgacaaagacatctacaggggc 5739507
Score = 52.0 bits (26), Expect = 7e-004
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 1480 gaacctttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgc 1539
||||||||||| || | || ||||| ||||||||||| |||| ||| ||| |||| |||
Sbjct: 5737764 gaacctttgaatgcaggcctcttaggcatgcagtaaatagacctccatccacggcaatgc 5737823
Query: 1540 atcttaaacccagtaagaatatcttctgtgactgatccataaatccaacc 1589
||||| || || || | |||||| ||||||| || ||||| ||||||||
Sbjct: 5737824 atcttgaatcccgtcaaaatatcctctgtgatagagccatagatccaacc 5737873
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1524 ccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaat 1583
||||||||| | ||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 25902535 ccaaccatgagaatgcatcttaaaacccgtaagaatatcttcggtaacagaaccatagat 25902476
Query: 1584 ccaaccaat 1592
||| |||||
Sbjct: 25902475 ccacccaat 25902467
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1708 gatgcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| || | |||||| ||||||||||| |||||||||
Sbjct: 25902269 gatgcaacaaatacaggagactgcccaaatttcttctccaacttc 25902225
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 1594 tcttttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttc 1653
||||||||||| | ||||| ||||| ||||||||||| ||||| || || ||||| |
Sbjct: 3076806 tcttttccccattcggttttatcttcgtatccacaactaatgacttggatggcttctcta 3076747
Query: 1654 agaagagaagctggact 1670
|| ||||||||||||||
Sbjct: 3076746 agcagagaagctggact 3076730
Score = 48.1 bits (24), Expect = 0.012
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 800 tcccaaccagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaaga 859
|||||| |||||| || ||||| || || ||||||| ||| |||||||| |||||||| |
Sbjct: 3077835 tcccaagcagacctttaaggaaaggatatagatggaggatgacccaaaaggcaaagaaca 3077776
Query: 860 gcttcccgaacagggggccccatgattcatatccgttgttgatcgcat 907
| ||||| || || ||||| || ||||||||||| |||||||||
Sbjct: 3077775 atcttccgaaaagaggaccccacgagtcatatccgttactgatcgcat 3077728
Score = 44.1 bits (22), Expect = 0.18
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2530 ttgattctgaccttgaattcctcatactctctct 2563
||||| ||||||||||| |||||||| |||||||
Sbjct: 5739074 ttgatcctgaccttgaactcctcatattctctct 5739107
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1711 gcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| | |||||| ||||| ||||| |||||||||
Sbjct: 3076689 gcaacaaaaacaggagactgtccaaacttcttctccaacttc 3076648
>gb|BE521782.1|BE521782 M21E12STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M21E12 5', mRNA sequence
Length = 338
Score = 105 bits (53), Expect = 6e-020
Identities = 113/133 (84%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 140 ccagtacccacatatactggaccgtggataccatccaaccctttcatgttaatatcgaaa 81
Query: 2092 aagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgagga 2151
||||| | ||| ||||| ||||||||||| || |||||| || ||||| | ||||||
Sbjct: 80 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 21
Query: 2152 aactgcacatagc 2164
||||| |||||||
Sbjct: 20 aactggacatagc 8
>dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVP7
Length = 39645
Score = 105 bits (53), Expect = 6e-020
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 2635 taccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttcttt 2694
||||| || |||||||||||||||| | |||| | ||||||||||||||||||||| ||
Sbjct: 20562 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 20503
Query: 2695 gcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaa 2754
|| ||||||| || ||||| | ||||| || || ||||| |||||||||||||||||
Sbjct: 20502 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcagat 20443
Query: 2755 acgtagcacgaaaccttatcaactggataatccaccgaaaggatagatagaacagtatta 2814
||||| || | ||||||||| || |||||||| || | ||| ||||| | ||||||||
Sbjct: 20442 acgtaacaagcaaccttatcgacaggataatcaacagcaagaatagacaagacagtattt 20383
Query: 2815 gcagt 2819
|||||
Sbjct: 20382 gcagt 20378
Score = 89.7 bits (45), Expect = 3e-015
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 1027 gatgtcacagtgaagctcgtgtctacaccagctatgaccttgagtagtccctggaacaca 1086
||||| || |||||| | ||||| |||||||| | |||||||| || || ||||| | |
Sbjct: 22946 gatgtgactgtgaagttagtgtcgacaccagcaagaaccttgaggagaccttggaagaga 22887
Query: 1087 gcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtca 1146
||||| ||||| | ||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 22886 gcaaacagatgcgcagaaacacctccaatgacccaaaactgttcgtttctccaccaatca 22827
Query: 1147 tcgat 1151
|||||
Sbjct: 22826 tcgat 22822
Score = 83.8 bits (42), Expect = 2e-013
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||||||| || | |||||||||||| || |||||||| ||||| ||||| || | ||||
Sbjct: 21468 tatcgatcgtgcctatcaatcccatcgaacctttgagggaactgaacataacagattttc 21409
Query: 2173 tttccaagcaaaggatccatcataaaacacattgcttcctttatagccttactattattg 2232
||||| | |||||||||||| |||||||||||||| | | ||| || ||||| |||
Sbjct: 21408 tttcctgactgaggatccatcatgaaacacattgcttctctaagagctttgctattgttg 21349
Query: 2233 atatagtgatcacaatccaagttcagcaaataaggagcattagttagtacagcagagact 2292
|| |||||||||||||| | ||||| | ||||||||||| | ||| || ||||||||
Sbjct: 21348 atgtagtgatcacaatcgacattcagaaggtaaggagcatttgatagaaccccagagact 21289
Query: 2293 cg 2294
||
Sbjct: 21288 cg 21287
Score = 60.0 bits (30), Expect = 3e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
||||||||||| ||||||||||| || ||| |||| |||||||| || || || || |||
Sbjct: 20962 acctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgtaccgtcttgc 20903
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||||| || |||||||| || || || ||| | || || || |||||||| | ||
Sbjct: 20902 atagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattgatctttact 20843
Query: 2542 ttgaattcctcatactctctct 2563
|||||||| ||||| |||||||
Sbjct: 20842 ttgaattcttcataatctctct 20821
Score = 58.0 bits (29), Expect = 1e-005
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 745 atcgaagccaggaggatggaccagacaatgacaatcgttggcgtcctgttctgcctccca 804
||||| |||||||||||||||||||| | | ||| |||||| | || | || |||||
Sbjct: 23228 atcgaggccaggaggatggaccagacgacaataatggttggcattctatcttgtttccca 23169
Query: 805 accagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaa 857
| || ||| || ||||||||||||||||| | ||| ||||||| |||||||||
Sbjct: 23168 agcaaacctttaaggaacgggtaaagatgaatgatgacccaaagtgcaaagaa 23116
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1524 ccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaat 1583
||||||||| | ||||||||||| || |||||||||||||| || || || ||||| ||
Sbjct: 22289 ccaaccatgagaatgcatcttaaaacccgtaagaatatcttcggtaacagaaccatagat 22230
Query: 1584 ccaaccaat 1592
||| |||||
Sbjct: 22229 ccacccaat 22221
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1708 gatgcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| || | |||||| ||||||||||| |||||||||
Sbjct: 22023 gatgcaacaaatacaggagactgcccaaatttcttctccaacttc 21979
>gb|AV823575.1|AV823575 AV823575 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-21-E11 5', mRNA
sequence
Length = 582
Score = 103 bits (52), Expect = 2e-019
Identities = 127/152 (83%)
Strand = Plus / Minus
Query: 2635 taccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttcttt 2694
||||| || |||||||||||||||| | |||| | ||||||||||||||||||||| ||
Sbjct: 266 taccattcgggagcacgaggctcaatacaatatttcttgcagaaaggaacccatttcctt 207
Query: 2695 gcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaa 2754
|| ||||||| || ||||| | ||||| || || ||||| |||||||||||||||||
Sbjct: 206 gcgaattcagcggtctcagaaagagcttcgaaagtaagcatagcagcaccatcatcagat 147
Query: 2755 acgtagcacgaaaccttatcaactggataatc 2786
||||| || | ||||||||| || ||||||||
Sbjct: 146 acgtaacaagcaaccttatcgacaggataatc 115
Score = 87.7 bits (44), Expect = 1e-014
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 2413 ccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggccatggagtt 2472
|||||||| ||||||||||| ||||||||||| || ||| |||| |||||||| || ||
Sbjct: 488 ccaaggaagacctgaatcatgccaggatgatctcgcacactattaccgggccaaggtgta 429
Query: 2473 ccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattg 2532
|| || ||||| ||||| || |||||||| || || || ||| | || || || ||||||
Sbjct: 428 ccgtcttgcatagtccaaccatcctcaggcactttctgtgctgttgctactaaagcattg 369
Query: 2533 attctgaccttgaattcctcatactctctcttcattgctctccgttctctaacaaa 2588
|| | || |||||||| ||||| ||||||||||| |||| ||| || ||||||||
Sbjct: 368 atctttactttgaattcttcataatctctcttcatggctcgccgctccctaacaaa 313
>gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
mRNA, complete cds
Length = 3771
Score = 103 bits (52), Expect = 2e-019
Identities = 136/164 (82%)
Strand = Plus / Minus
Query: 2404 ccactttgaccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggc 2463
||||| ||||| | ||| |||||||||||||||||||| |||||||| || ||||| |||
Sbjct: 1748 ccactatgacccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggc 1689
Query: 2464 catggagttccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaacc 2523
|| ||||||||||| ||||| ||||| ||||||||||| || || || || ||||||||
Sbjct: 1688 caaggagttccatcttgcatagtccaaccttcctcaggcactttctgtgcagtagcaacc 1629
Query: 2524 aaggcattgattctgaccttgaattcctcatactctctcttcat 2567
| ||||| || | || || || |||||||| |||||||||||
Sbjct: 1628 agtgcatttatcttcactttaaactcctcataatctctcttcat 1585
Score = 91.7 bits (46), Expect = 9e-016
Identities = 205/258 (79%)
Strand = Plus / Minus
Query: 2070 acctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatc 2129
|||||||||||| ||||| || || ||||| || | ||| | |||| |||||| | |||
Sbjct: 2082 acctttcatgttaatatcaaagaacacaacgttacggtttgagtatctatcatgtctatc 2023
Query: 2130 aatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatc 2189
||||||||||||||| || |||||||| ||||| |||||||||||||| || ||
Sbjct: 2022 aatcccatcaaatctctgcggaaactgaacataacaaactttctttcccgattgcgggtc 1963
Query: 2190 catcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaatc 2249
|||||| |||||||| | ||| | || || || || || ||||| ||||||||||||||
Sbjct: 1962 catcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcacaatc 1903
Query: 2250 caagttcagcaaataaggagcattagttagtacagcagagactcggaccaatgcattcat 2309
| || || | |||||||| || | ||| |||||||||||||||| ||| | ||||||
Sbjct: 1902 gacattaagaaggtaaggagcgtttgatagaacagcagagactcggatcaaggaattcat 1843
Query: 2310 agcaccagccttcttgtg 2327
||| ||||| ||||||||
Sbjct: 1842 agctccagctttcttgtg 1825
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 3020 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 2961
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 2960 tgcatttcgaggat 2947
Score = 60.0 bits (30), Expect = 3e-006
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 1475 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 1416
Query: 2737 gcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatc 2786
|| |||||||| || || || || |||| ||||||||| || ||||||||
Sbjct: 1415 gctgcaccatcgtctgatacataacacgcaaccttatccacaggataatc 1366
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaa 1587
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 2600 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccac 2541
Query: 1588 ccaatatcttttcccca 1604
|| || |||||||||||
Sbjct: 2540 ccgatctcttttcccca 2524
>emb|AX505864.1| Sequence 559 from Patent WO0216655
Length = 3255
Score = 103 bits (52), Expect = 2e-019
Identities = 136/164 (82%)
Strand = Plus / Minus
Query: 2404 ccactttgaccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggc 2463
||||| ||||| | ||| |||||||||||||||||||| |||||||| || ||||| |||
Sbjct: 1532 ccactatgacccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggc 1473
Query: 2464 catggagttccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaacc 2523
|| ||||||||||| ||||| ||||| ||||||||||| || || || || ||||||||
Sbjct: 1472 caaggagttccatcttgcatagtccaaccttcctcaggcactttctgtgcagtagcaacc 1413
Query: 2524 aaggcattgattctgaccttgaattcctcatactctctcttcat 2567
| ||||| || | || || || |||||||| |||||||||||
Sbjct: 1412 agtgcatttatcttcactttaaactcctcataatctctcttcat 1369
Score = 91.7 bits (46), Expect = 9e-016
Identities = 205/258 (79%)
Strand = Plus / Minus
Query: 2070 acctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatc 2129
|||||||||||| ||||| || || ||||| || | ||| | |||| |||||| | |||
Sbjct: 1866 acctttcatgttaatatcaaagaacacaacgttacggtttgagtatctatcatgtctatc 1807
Query: 2130 aatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatc 2189
||||||||||||||| || |||||||| ||||| |||||||||||||| || ||
Sbjct: 1806 aatcccatcaaatctctgcggaaactgaacataacaaactttctttcccgattgcgggtc 1747
Query: 2190 catcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaatc 2249
|||||| |||||||| | ||| | || || || || || ||||| ||||||||||||||
Sbjct: 1746 catcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcacaatc 1687
Query: 2250 caagttcagcaaataaggagcattagttagtacagcagagactcggaccaatgcattcat 2309
| || || | |||||||| || | ||| |||||||||||||||| ||| | ||||||
Sbjct: 1686 gacattaagaaggtaaggagcgtttgatagaacagcagagactcggatcaaggaattcat 1627
Query: 2310 agcaccagccttcttgtg 2327
||| ||||| ||||||||
Sbjct: 1626 agctccagctttcttgtg 1609
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 2804 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 2745
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 2744 tgcatttcgaggat 2731
Score = 60.0 bits (30), Expect = 3e-006
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 1259 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 1200
Query: 2737 gcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatc 2786
|| |||||||| || || || || |||| ||||||||| || ||||||||
Sbjct: 1199 gctgcaccatcgtctgatacataacacgcaaccttatccacaggataatc 1150
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaa 1587
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 2384 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccac 2325
Query: 1588 ccaatatcttttcccca 1604
|| || |||||||||||
Sbjct: 2324 ccgatctcttttcccca 2308
>ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synthase/ transferase,
transferring glycosyl groups AT4G39350 (CESA2) mRNA,
complete cds
Length = 3726
Score = 103 bits (52), Expect = 2e-019
Identities = 136/164 (82%)
Strand = Plus / Minus
Query: 2404 ccactttgaccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggc 2463
||||| ||||| | ||| |||||||||||||||||||| |||||||| || ||||| |||
Sbjct: 1701 ccactatgacccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggc 1642
Query: 2464 catggagttccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaacc 2523
|| ||||||||||| ||||| ||||| ||||||||||| || || || || ||||||||
Sbjct: 1641 caaggagttccatcttgcatagtccaaccttcctcaggcactttctgtgcagtagcaacc 1582
Query: 2524 aaggcattgattctgaccttgaattcctcatactctctcttcat 2567
| ||||| || | || || || |||||||| |||||||||||
Sbjct: 1581 agtgcatttatcttcactttaaactcctcataatctctcttcat 1538
Score = 91.7 bits (46), Expect = 9e-016
Identities = 205/258 (79%)
Strand = Plus / Minus
Query: 2070 acctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatc 2129
|||||||||||| ||||| || || ||||| || | ||| | |||| |||||| | |||
Sbjct: 2035 acctttcatgttaatatcaaagaacacaacgttacggtttgagtatctatcatgtctatc 1976
Query: 2130 aatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatc 2189
||||||||||||||| || |||||||| ||||| |||||||||||||| || ||
Sbjct: 1975 aatcccatcaaatctctgcggaaactgaacataacaaactttctttcccgattgcgggtc 1916
Query: 2190 catcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaatc 2249
|||||| |||||||| | ||| | || || || || || ||||| ||||||||||||||
Sbjct: 1915 catcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcacaatc 1856
Query: 2250 caagttcagcaaataaggagcattagttagtacagcagagactcggaccaatgcattcat 2309
| || || | |||||||| || | ||| |||||||||||||||| ||| | ||||||
Sbjct: 1855 gacattaagaaggtaaggagcgtttgatagaacagcagagactcggatcaaggaattcat 1796
Query: 2310 agcaccagccttcttgtg 2327
||| ||||| ||||||||
Sbjct: 1795 agctccagctttcttgtg 1778
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 2973 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 2914
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 2913 tgcatttcgaggat 2900
Score = 60.0 bits (30), Expect = 3e-006
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 1428 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 1369
Query: 2737 gcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatc 2786
|| |||||||| || || || || |||| ||||||||| || ||||||||
Sbjct: 1368 gctgcaccatcgtctgatacataacacgcaaccttatccacaggataatc 1319
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaa 1587
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 2553 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccac 2494
Query: 1588 ccaatatcttttcccca 1604
|| || |||||||||||
Sbjct: 2493 ccgatctcttttcccca 2477
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
sequence
Length = 107848
Score = 99.6 bits (50), Expect = 4e-018
Identities = 245/310 (79%)
Strand = Plus / Minus
Query: 2674 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 2733
||||||||||||||||| ||||||| || | ||| | ||| | ||||||||||| |||
Sbjct: 17793 cagaaaggaacccattttcttgcaaactcggctgtgtaagagagagcttcaaatgtaagc 17734
Query: 2734 atggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaa 2793
|| |||||||||||||| || || || || | |||||| ||||| |||||||| || |
Sbjct: 17733 attgcagcaccatcatctgatacataacatgcaaccttctcaaccggataatcaacagcg 17674
Query: 2794 aggatagatagaacagtattagcagtgaccaatggaggttccttcaagggatcaaccgta 2853
|| ||||| ||||| ||||| || || | || |||||| || ||||| ||||| || |||
Sbjct: 17673 agaatagacagaaccgtatttgctgtaatcagtggaggctctttcaatggatccacagta 17614
Query: 2854 ctgacaaagaaatcaacaggggcgagttgagaaggatgcccttccttgtcaaaccttaaa 2913
|| ||||||| ||| ||||| || | | || || | ||||||||| ||| |||||| |
Sbjct: 17613 ctaacaaagacatcgacaggcgctaactctgatggcttcccttccttctcataccttaga 17554
Query: 2914 ctcagccggtcaagataggtttccctctcgataggaaaccactttggaaactggtcaaga 2973
|||| ||| ||||| ||||| || ||||| ||| |||| ||||| ||||| ||||||
Sbjct: 17553 gaaagcctgtcgagatatgtttctctttcgatgggataccattttgggaactgatcaaga 17494
Query: 2974 atccaagaca 2983
||||||||||
Sbjct: 17493 atccaagaca 17484
Score = 95.6 bits (48), Expect = 6e-017
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 1081 aacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccac 1140
|||| |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 19994 aacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtttctccac 19935
Query: 1141 cagtcatcgatgccta 1156
|| |||||||| ||||
Sbjct: 19934 caatcatcgattccta 19919
Score = 83.8 bits (42), Expect = 2e-013
Identities = 117/142 (82%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
|||||||||||||| ||||| || |||||||| ||||| ||||| ||||||||||| |||
Sbjct: 18144 acctgaatcattcctggatggtcccggacattgtttccaggccaaggagttccatcttgc 18085
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||||| || || |||||||| || || | | || |||||| ||||| || | ||
Sbjct: 18084 atagtccaaccatcttcaggaactttctgtgatacagaaaccaatgcatttatctttact 18025
Query: 2542 ttgaattcctcatactctctct 2563
|||||||||||||| |||||||
Sbjct: 18024 ttgaattcctcatagtctctct 18003
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 2014 tgccttctgaagacacatccagtacccacataaattgggccctggataccatccaaacct 2073
||||||||||||||||| || || |||||||| || || || || || ||||| ||||||
Sbjct: 18795 tgccttctgaagacacacccggtccccacatatatcggtccttgtatgccatctaaacct 18736
Query: 2074 ttcatgttgat 2084
|||||||||||
Sbjct: 18735 ttcatgttgat 18725
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||||||| || | ||||||||||||||| || ||||||||||| ||||| || | ||||
Sbjct: 18611 tatcgatcgtgtctatcaatcccatcaaacctctgaggaaactgaacataacatattttc 18552
Query: 2173 tttcc 2177
|||||
Sbjct: 18551 tttcc 18547
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 99.6 bits (50), Expect = 4e-018
Identities = 245/310 (79%)
Strand = Plus / Minus
Query: 2674 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 2733
||||||||||||||||| ||||||| || | ||| | ||| | ||||||||||| |||
Sbjct: 9293950 cagaaaggaacccattttcttgcaaactcggctgtgtaagagagagcttcaaatgtaagc 9293891
Query: 2734 atggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaa 2793
|| |||||||||||||| || || || || | |||||| ||||| |||||||| || |
Sbjct: 9293890 attgcagcaccatcatctgatacataacatgcaaccttctcaaccggataatcaacagcg 9293831
Query: 2794 aggatagatagaacagtattagcagtgaccaatggaggttccttcaagggatcaaccgta 2853
|| ||||| ||||| ||||| || || | || |||||| || ||||| ||||| || |||
Sbjct: 9293830 agaatagacagaaccgtatttgctgtaatcagtggaggctctttcaatggatccacagta 9293771
Query: 2854 ctgacaaagaaatcaacaggggcgagttgagaaggatgcccttccttgtcaaaccttaaa 2913
|| ||||||| ||| ||||| || | | || || | ||||||||| ||| |||||| |
Sbjct: 9293770 ctaacaaagacatcgacaggcgctaactctgatggcttcccttccttctcataccttaga 9293711
Query: 2914 ctcagccggtcaagataggtttccctctcgataggaaaccactttggaaactggtcaaga 2973
|||| ||| ||||| ||||| || ||||| ||| |||| ||||| ||||| ||||||
Sbjct: 9293710 gaaagcctgtcgagatatgtttctctttcgatgggataccattttgggaactgatcaaga 9293651
Query: 2974 atccaagaca 2983
||||||||||
Sbjct: 9293650 atccaagaca 9293641
Score = 95.6 bits (48), Expect = 6e-017
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 1081 aacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccac 1140
|||| |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 9296151 aacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtttctccac 9296092
Query: 1141 cagtcatcgatgccta 1156
|| |||||||| ||||
Sbjct: 9296091 caatcatcgattccta 9296076
Score = 83.8 bits (42), Expect = 2e-013
Identities = 117/142 (82%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
|||||||||||||| ||||| || |||||||| ||||| ||||| ||||||||||| |||
Sbjct: 9294301 acctgaatcattcctggatggtcccggacattgtttccaggccaaggagttccatcttgc 9294242
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||||| || || |||||||| || || | | || |||||| ||||| || | ||
Sbjct: 9294241 atagtccaaccatcttcaggaactttctgtgatacagaaaccaatgcatttatctttact 9294182
Query: 2542 ttgaattcctcatactctctct 2563
|||||||||||||| |||||||
Sbjct: 9294181 ttgaattcctcatagtctctct 9294160
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 2014 tgccttctgaagacacatccagtacccacataaattgggccctggataccatccaaacct 2073
||||||||||||||||| || || |||||||| || || || || || ||||| ||||||
Sbjct: 9294952 tgccttctgaagacacacccggtccccacatatatcggtccttgtatgccatctaaacct 9294893
Query: 2074 ttcatgttgat 2084
|||||||||||
Sbjct: 9294892 ttcatgttgat 9294882
Score = 58.0 bits (29), Expect = 1e-005
Identities = 110/137 (80%)
Strand = Plus / Plus
Query: 2671 ttgcagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtc 2730
||||| ||||| ||||||||||||| || |||| |||||||| | |||||||| ||
Sbjct: 10876860 ttgcaaaaaggtacccatttctttgagaactcagccgtttcagaaagggcttcaaaagtt 10876919
Query: 2731 agcatggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccacc 2790
||||| || | ||| ||||| |||||||| |||| ||| ||||| ||||| || |||||
Sbjct: 10876920 agcatagctgaaccgtcatccgaaacgtaacacgcaactttatccactgggtagtccaca 10876979
Query: 2791 gaaaggatagatagaac 2807
| |||||| || |||||
Sbjct: 10876980 gcaaggattgagagaac 10876996
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||||||| || | ||||||||||||||| || ||||||||||| ||||| || | ||||
Sbjct: 9294768 tatcgatcgtgtctatcaatcccatcaaacctctgaggaaactgaacataacatattttc 9294709
Query: 2173 tttcc 2177
|||||
Sbjct: 9294708 tttcc 9294704
Score = 50.1 bits (25), Expect = 0.003
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1117 acccaaaactgctcgtttctccaccagtc 1145
||||||||||||||||| |||||||||||
Sbjct: 10874602 acccaaaactgctcgttcctccaccagtc 10874630
Score = 48.1 bits (24), Expect = 0.012
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2296 accaatgcattcatagcaccagccttcttgtg 2327
||||| ||||||||||| ||||||||||||||
Sbjct: 10876275 accaaggcattcatagctccagccttcttgtg 10876306
Score = 48.1 bits (24), Expect = 0.012
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgt 1568
|||||||| || ||||||||||||||||||||
Sbjct: 10875106 tgcatcttgaatccagtaagaatatcttctgt 10875137
Score = 46.1 bits (23), Expect = 0.046
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 2528 cattgattctgaccttgaattcctcatactc 2558
||||||| |||||||||||||| ||||||||
Sbjct: 14045788 cattgatcctgaccttgaattcgtcatactc 14045818
Score = 46.1 bits (23), Expect = 0.046
Identities = 74/91 (81%)
Strand = Plus / Plus
Query: 2473 ccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattg 2532
||||||| ||||||||| || || ||||||| ||| || |||||||| || | | ||||
Sbjct: 10876551 ccatcctccattgtccaaccatcttcaggaatcttctgtgctttagcgacgaggatattg 10876610
Query: 2533 attctgaccttgaattcctcatactctctct 2563
|| || || || || ||||||||||||||||
Sbjct: 10876611 atcctcactttaaactcctcatactctctct 10876641
Score = 46.1 bits (23), Expect = 0.046
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 763 gaccagacaatgacaatcgttggcgtcctgttctgcctcccaaccagacccttgaggaac 822
||||||||||||||||| || || |||| |||||| || || | |||||||| | |||
Sbjct: 10874245 gaccagacaatgacaatggtcggagtccggttctgtctgcccaaaagacccttcaagaaa 10874304
Query: 823 gggtaaagatg 833
|||||||||||
Sbjct: 10874305 gggtaaagatg 10874315
Score = 44.1 bits (22), Expect = 0.18
Identities = 97/122 (79%)
Strand = Plus / Plus
Query: 2128 tcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaagga 2187
||||| ||||| || | ||| ||||||||||| |||||| |||||||| | |||
Sbjct: 10875931 tcaataccatcgaaacgttgtggaaactgcacgtagcaacacttctttccgattgcaggg 10875990
Query: 2188 tccatcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaa 2247
|||||||| |||||||| |||||||| || ||||| || || |||| || |||||||||
Sbjct: 10875991 tccatcatgaaacacatggcttccttaatcgccttgctgttgttgaagtaatgatcacaa 10876050
Query: 2248 tc 2249
||
Sbjct: 10876051 tc 10876052
>gb|B24204.1|B24204 F19F17TF IGF Arabidopsis thaliana genomic clone F19F17, DNA sequence
Length = 598
Score = 95.6 bits (48), Expect = 6e-017
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 1081 aacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccac 1140
|||| |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 50 aacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtttctccac 109
Query: 1141 cagtcatcgatgccta 1156
|| |||||||| ||||
Sbjct: 110 caatcatcgattccta 125
>gb|BH611908.1|BH611908 SALK_031874 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_031874, DNA sequence
Length = 212
Score = 95.6 bits (48), Expect = 6e-017
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 1081 aacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccac 1140
|||| |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 90 aacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtttctccac 31
Query: 1141 cagtcatcgatgccta 1156
|| |||||||| ||||
Sbjct: 30 caatcatcgattccta 15
>gb|CF651830.1|CF651830 17-L020525-066-003-B05-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001B053Q 5-PRIME, mRNA sequence
Length = 821
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 661 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 602
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 601 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 542
Query: 1657 agag 1660
||||
Sbjct: 541 agag 538
Score = 71.9 bits (36), Expect = 8e-010
Identities = 75/88 (85%)
Strand = Plus / Minus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaa 2091
|||||||||||||| | ||| ||| ||||||||||||| || |||||||| |||| ||||
Sbjct: 195 ccagtacccacatatactggacccgggataccatccaaccccttcatgttaatatggaaa 136
Query: 2092 aagacaacatttctgttagcatatcgat 2119
||||| | ||| |||| ||||||||||
Sbjct: 135 aagactatattcctgtgggcatatcgat 108
>gb|BP824749.1|BP824749 BP824749 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-66-D23 5',
mRNA sequence
Length = 387
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 237 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 178
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 177 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 118
Query: 1657 agag 1660
||||
Sbjct: 117 agag 114
>dbj|BD022675.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 5009
Score = 95.6 bits (48), Expect = 6e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
|||||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||
Sbjct: 3359 acctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttgc 3300
Query: 2482 attgtccatccttcctcagg 2501
|| ||||| |||||||||||
Sbjct: 3299 atagtccaaccttcctcagg 3280
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||| |||||| | |||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 3907 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 3848
Query: 2173 tttcc 2177
|||||
Sbjct: 3847 tttcc 3843
Score = 46.1 bits (23), Expect = 0.046
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatcca 1586
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 4723 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatcca 4665
Score = 44.1 bits (22), Expect = 0.18
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 3006 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 2947
Query: 2737 gcagcaccat 2746
|| |||||||
Sbjct: 2946 gctgcaccat 2937
>emb|AX030941.1| Sequence 4 from Patent WO9800549
Length = 5009
Score = 95.6 bits (48), Expect = 6e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
|||||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||
Sbjct: 3359 acctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttgc 3300
Query: 2482 attgtccatccttcctcagg 2501
|| ||||| |||||||||||
Sbjct: 3299 atagtccaaccttcctcagg 3280
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||| |||||| | |||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 3907 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 3848
Query: 2173 tttcc 2177
|||||
Sbjct: 3847 tttcc 3843
Score = 46.1 bits (23), Expect = 0.046
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatcca 1586
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 4723 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatcca 4665
Score = 44.1 bits (22), Expect = 0.18
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 3006 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 2947
Query: 2737 gcagcaccat 2746
|| |||||||
Sbjct: 2946 gctgcaccat 2937
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 95.6 bits (48), Expect = 6e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
|||||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||
Sbjct: 14212365 acctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttgc 14212306
Query: 2482 attgtccatccttcctcagg 2501
|| ||||| |||||||||||
Sbjct: 14212305 atagtccaaccttcctcagg 14212286
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||| |||||| | |||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 14212913 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 14212854
Query: 2173 tttcc 2177
|||||
Sbjct: 14212853 tttcc 14212849
Score = 73.8 bits (37), Expect = 2e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2085 atcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatct 2144
|||||||||||| | ||| ||||| ||||||||||| || |||||| || ||||| |
Sbjct: 11555550 atcgaaaaagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacg 11555609
Query: 2145 ttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacat 2204
|||||| ||||| |||||||| |||||||||| || |||||||| ||||||||
Sbjct: 11555610 ttgagggaactggacatagcagcacttctttccaatagccgggtccatcatgaaacacat 11555669
Query: 2205 tgcttcctttatagccttactattattgatatagtgatcacaatccaagttca 2257
||||| || ||||||||||| ||||| | || ||||||||||||| |||||
Sbjct: 11555670 agcttctttaatagccttactgttattaaagtaatgatcacaatccacgttca 11555722
Score = 71.9 bits (36), Expect = 8e-010
Identities = 162/204 (79%)
Strand = Plus / Plus
Query: 2669 ttttgcagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatg 2728
||||||||||||| ||||||||| | ||||| || | ||| ||| ||| | ||||| |
Sbjct: 6228045 ttttgcagaaaggtacccatttcctagcaaaatctgctgtctcaaccaaagactcaaacg 6228104
Query: 2729 tcagcatggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatcca 2788
||||| ||||||||||||||||| || ||||| || || ||||| || |||||||| |
Sbjct: 6228105 aaagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataatcaa 6228164
Query: 2789 ccgaaaggatagatagaacagtattagcagtgaccaatggaggttccttcaagggatcaa 2848
|| ||||| || ||||| || || ||||| | ||| || || ||||| || ||||| |
Sbjct: 6228165 gcgcgaggatcgaaagaaccgtgtttgcagttatcaaaggtggctcctttaatggatcta 6228224
Query: 2849 ccgtactgacaaagaaatcaacag 2872
||||||| ||||||||||| ||||
Sbjct: 6228225 ccgtactaacaaagaaatctacag 6228248
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 14214233 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 14214174
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 14214173 tgcatttcgaggat 14214160
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaat 1592
|||||||| |||||||||||||||||||| || || || ||||| |||||||||||
Sbjct: 11554755 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaat 11554810
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 11554247 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 11554306
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 11554307 agctccaggat 11554317
Score = 60.0 bits (30), Expect = 3e-006
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 14212012 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 14211953
Query: 2737 gcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatc 2786
|| |||||||| || || || || |||| ||||||||| || ||||||||
Sbjct: 14211952 gctgcaccatcgtctgatacataacacgcaaccttatccacaggataatc 14211903
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgtt 2081
|||||||||||||| | ||| ||||||||||||||||| || ||||||||
Sbjct: 11555391 ccagtacccacatatactggaccctggataccatccaaccccttcatgtt 11555440
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Plus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 11553853 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 11553912
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 11553913 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 11553972
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 11553973 aacccataaggcgaagaagagcttcccgaa 11554002
Score = 52.0 bits (26), Expect = 7e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1078 tggaacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctc 1137
||||| || ||||||||||| | || || |||||||| ||||||||||| |||||||||
Sbjct: 6226026 tggaaaacggcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctc 6226085
Query: 1138 ca 1139
||
Sbjct: 6226086 ca 6226087
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2461 ggccatggagttccatcctgcattgtccatccttcctcagg 2501
||||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 11556158 ggccagggagtaccatcctgcattgtccagccttcttcagg 11556198
Score = 48.1 bits (24), Expect = 0.012
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2296 accaatgcattcatagcaccagccttcttgtg 2327
||||||||||||||||| |||||||| |||||
Sbjct: 11555912 accaatgcattcatagctccagcctttttgtg 11555943
Score = 48.1 bits (24), Expect = 0.012
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 2420 aaacctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcct 2479
||||||||||||| || ||||| ||||| || || |||||||| | |||||||| |
Sbjct: 6227700 aaacctgaatcatcccgggatggtcacgagtgttgttcccgggccaagatgttccatctt 6227759
Query: 2480 gcattgtccatccttc 2495
||||||||||||||||
Sbjct: 6227760 gcattgtccatccttc 6227775
Score = 48.1 bits (24), Expect = 0.012
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1594 tcttttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttc 1649
||||||||||| | ||||| ||||| |||||||| || |||||||| ||||||||
Sbjct: 6226701 tcttttccccattcagttttctcttcgtatccacagctaatgacatgaatagcttc 6226756
Score = 46.1 bits (23), Expect = 0.046
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatcca 1586
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 14213729 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatcca 14213671
Score = 46.1 bits (23), Expect = 0.046
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 2986 gcaaaccaaatttcacagatcacagatatgagccataaa 3024
||||||||||| ||||| ||||||||| | |||||||||
Sbjct: 6228453 gcaaaccaaatctcacatatcacagatgttagccataaa 6228491
Score = 44.1 bits (22), Expect = 0.18
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 2683 acccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagca 2742
||||||||||||||||| |||| |||||||| | | |||||| || ||||| || | |
Sbjct: 11556458 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 11556517
Query: 2743 ccatcatcagaaac 2756
|||||||| |||||
Sbjct: 11556518 ccatcatctgaaac 11556531
Score = 44.1 bits (22), Expect = 0.18
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 1426 ccaagagcccaccgaagaacctggtgaagacgatcggaaagattga 1471
||||||||||| || |||||||||||||| | ||| || |||||||
Sbjct: 6226460 ccaagagcccaacgtagaacctggtgaagcctatctgatagattga 6226505
>dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH9
Length = 82390
Score = 95.6 bits (48), Expect = 6e-017
Identities = 138/168 (82%)
Strand = Plus / Minus
Query: 2127 atcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaagg 2186
|||||||||||| ||||||||||| || || ||||| |||| ||||||||| | |||
Sbjct: 28893 atcaatcccatcgaatctttgagggaattgaacataacaaattttctttcccgactgagg 28834
Query: 2187 atccatcataaaacacattgcttcctttatagccttactattattgatatagtgatcaca 2246
||||||||| |||||||||||||| | | ||| || ||||||||||| |||||||||||
Sbjct: 28833 atccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatcaca 28774
Query: 2247 atccaagttcagcaaataaggagcattagttagtacagcagagactcg 2294
||| | || || | |||||||||||| | ||| || ||||||||||
Sbjct: 28773 atcgacatttagaagataaggagcatttgatagaactccagagactcg 28726
Score = 73.8 bits (37), Expect = 2e-010
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 2674 cagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagc 2733
|||||||||||||||||| | ||||| || | |||||| || | |||||||| || |||
Sbjct: 28052 cagaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaaagtaagc 27993
Query: 2734 atggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaa 2793
|| |||||||||||||||||||| || || | ||| | || || |||||||| |||| |
Sbjct: 27992 atagcagcaccatcatcagaaacataacaggcaactctgtctaccggataatcaaccgca 27933
Query: 2794 aggatagatagaacagt 2810
|| ||||| ||||||||
Sbjct: 27932 agaatagacagaacagt 27916
Score = 71.9 bits (36), Expect = 8e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1086 agcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtc 1145
|||||||||||| | || || |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 30312 agcaaagagatgagctgaaacacctccaatcacccaaaactgttcgtttctccaccaatc 30253
Query: 1146 atcgatgcctac 1157
|||||| |||||
Sbjct: 30252 atcgatccctac 30241
Score = 65.9 bits (33), Expect = 5e-008
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 1369 ccaccaccatacccataccagagagggcagtggttgctgaagaaaatttcaattgaacca 1428
||||| ||||| |||||||| | ||| || || |||| |||||||| |||| || ||
Sbjct: 29892 ccacctccataaccataccaaataggacaatgtctgctcaagaaaatctcaacagacccg 29833
Query: 1429 agagcccaccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctttg 1488
|| |||||||||||||| || |||||||| || |||||||||| |||||| || |||||
Sbjct: 29832 agcgcccaccgaagaacttgatgaagacggtcagaaagattgataggtgctgatccttta 29773
Query: 1489 aaggc 1493
|||||
Sbjct: 29772 aaggc 29768
Score = 60.0 bits (30), Expect = 3e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
||||| ||||| ||||| ||||| || || ||||| |||||||| ||||| || || |||
Sbjct: 28392 acctggatcatgccagggtgatctcgcacgttattaccgggccaaggagtaccgtcttgc 28333
Query: 2482 attgtccatccttcctcaggaaccttttgggctttagcaaccaaggcattgattctgacc 2541
|| ||||| ||||| ||||| || || || || | ||||| || |||||||| | |||
Sbjct: 28332 atagtccaaccttcttcaggcactttctgtgcagtcgcaactaaagcattgatcttaacc 28273
Query: 2542 ttgaattcctcatactctctct 2563
|||||||| ||||| |||||||
Sbjct: 28272 ttgaattcttcataatctctct 28251
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 1594 tcttttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttc 1653
||||||||||| | ||||| ||||| ||||||||||| ||||| || || ||||| |
Sbjct: 29569 tcttttccccattcggttttatcttcgtatccacaactaatgacttggatggcttctcta 29510
Query: 1654 agaagagaagctggact 1670
|| ||||||||||||||
Sbjct: 29509 agcagagaagctggact 29493
Score = 48.1 bits (24), Expect = 0.012
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 800 tcccaaccagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaaga 859
|||||| |||||| || ||||| || || ||||||| ||| |||||||| |||||||| |
Sbjct: 30598 tcccaagcagacctttaaggaaaggatatagatggaggatgacccaaaaggcaaagaaca 30539
Query: 860 gcttcccgaacagggggccccatgattcatatccgttgttgatcgcat 907
| ||||| || || ||||| || ||||||||||| |||||||||
Sbjct: 30538 atcttccgaaaagaggaccccacgagtcatatccgttactgatcgcat 30491
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1711 gcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| | |||||| ||||| ||||| |||||||||
Sbjct: 29452 gcaacaaaaacaggagactgtccaaacttcttctccaacttc 29411
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
Length = 89035
Score = 95.6 bits (48), Expect = 6e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
|||||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||
Sbjct: 82263 acctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttgc 82204
Query: 2482 attgtccatccttcctcagg 2501
|| ||||| |||||||||||
Sbjct: 82203 atagtccaaccttcctcagg 82184
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||| |||||| | |||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 82811 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 82752
Query: 2173 tttcc 2177
|||||
Sbjct: 82751 tttcc 82747
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 84131 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 84072
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 84071 tgcatttcgaggat 84058
Score = 60.0 bits (30), Expect = 3e-006
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 81910 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 81851
Query: 2737 gcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatc 2786
|| |||||||| || || || || |||| ||||||||| || ||||||||
Sbjct: 81850 gctgcaccatcgtctgatacataacacgcaaccttatccacaggataatc 81801
Score = 46.1 bits (23), Expect = 0.046
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatcca 1586
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 83627 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatcca 83569
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
Length = 198151
Score = 95.6 bits (48), Expect = 6e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
|||||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||
Sbjct: 19740 acctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttgc 19681
Query: 2482 attgtccatccttcctcagg 2501
|| ||||| |||||||||||
Sbjct: 19680 atagtccaaccttcctcagg 19661
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||| |||||| | |||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 20288 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 20229
Query: 2173 tttcc 2177
|||||
Sbjct: 20228 tttcc 20224
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 21608 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 21549
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 21548 tgcatttcgaggat 21535
Score = 60.0 bits (30), Expect = 3e-006
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 19387 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 19328
Query: 2737 gcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatc 2786
|| |||||||| || || || || |||| ||||||||| || ||||||||
Sbjct: 19327 gctgcaccatcgtctgatacataacacgcaaccttatccacaggataatc 19278
Score = 46.1 bits (23), Expect = 0.046
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatcca 1586
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 21104 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatcca 21046
>dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit,
complete cds, clone: RAFL22-92-A12
Length = 1456
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaatatct 1596
|||||||| |||||||||||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 236 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctct 177
Query: 1597 tttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcaga 1656
|| ||||| | || |||||||| || ||||| || || ||||| ||||| |||||||||
Sbjct: 176 ttgccccattcagtcttgtcttcgtaaccacagcttataacatgaatagcctccttcaga 117
Query: 1657 agag 1660
||||
Sbjct: 116 agag 113
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 662 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 603
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 602 agctccaggat 592
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 1056 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 997
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 996 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 937
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 936 aacccataaggcgaagaagagcttcccgaa 907
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 95.6 bits (48), Expect = 6e-017
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcctgc 2481
|||||||||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||
Sbjct: 18299565 acctgaatcattccaggatggtcacggacgttgtttccaggccaaggagttccatcttgc 18299506
Query: 2482 attgtccatccttcctcagg 2501
|| ||||| |||||||||||
Sbjct: 18299505 atagtccaaccttcctcagg 18299486
Score = 73.8 bits (37), Expect = 2e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2113 tatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttc 2172
|||| |||||| | |||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 18300113 tatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaactttc 18300054
Query: 2173 tttcc 2177
|||||
Sbjct: 18300053 tttcc 18300049
Score = 73.8 bits (37), Expect = 2e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2085 atcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatct 2144
|||||||||||| | ||| ||||| ||||||||||| || |||||| || ||||| |
Sbjct: 15642775 atcgaaaaagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacg 15642834
Query: 2145 ttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacat 2204
|||||| ||||| |||||||| |||||||||| || |||||||| ||||||||
Sbjct: 15642835 ttgagggaactggacatagcagcacttctttccaatagccgggtccatcatgaaacacat 15642894
Query: 2205 tgcttcctttatagccttactattattgatatagtgatcacaatccaagttca 2257
||||| || ||||||||||| ||||| | || ||||||||||||| |||||
Sbjct: 15642895 agcttctttaatagccttactgttattaaagtaatgatcacaatccacgttca 15642947
Score = 71.9 bits (36), Expect = 8e-010
Identities = 162/204 (79%)
Strand = Plus / Plus
Query: 2669 ttttgcagaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatg 2728
||||||||||||| ||||||||| | ||||| || | ||| ||| ||| | ||||| |
Sbjct: 10315300 ttttgcagaaaggtacccatttcctagcaaaatctgctgtctcaaccaaagactcaaacg 10315359
Query: 2729 tcagcatggcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatcca 2788
||||| ||||||||||||||||| || ||||| || || ||||| || |||||||| |
Sbjct: 10315360 aaagcattgcagcaccatcatcagatacatagcaagagactttatccaccggataatcaa 10315419
Query: 2789 ccgaaaggatagatagaacagtattagcagtgaccaatggaggttccttcaagggatcaa 2848
|| ||||| || ||||| || || ||||| | ||| || || ||||| || ||||| |
Sbjct: 10315420 gcgcgaggatcgaaagaaccgtgtttgcagttatcaaaggtggctcctttaatggatcta 10315479
Query: 2849 ccgtactgacaaagaaatcaacag 2872
||||||| ||||||||||| ||||
Sbjct: 10315480 ccgtactaacaaagaaatctacag 10315503
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 18301433 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 18301374
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 18301373 tgcatttcgaggat 18301360
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1537 tgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaaccaat 1592
|||||||| |||||||||||||||||||| || || || ||||| |||||||||||
Sbjct: 15641980 tgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaat 15642035
Score = 61.9 bits (31), Expect = 8e-007
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
||||||||||| ||||||||||| |||||||| || || |||| ||||| |||||||||
Sbjct: 15641472 ccaatgacccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctc 15641531
Query: 1171 atttccaggat 1181
| ||||||||
Sbjct: 15641532 agctccaggat 15641542
Score = 60.0 bits (30), Expect = 3e-006
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 18299212 aaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaatgtaagcata 18299153
Query: 2737 gcagcaccatcatcagaaacgtagcacgaaaccttatcaactggataatc 2786
|| |||||||| || || || || |||| ||||||||| || ||||||||
Sbjct: 18299152 gctgcaccatcgtctgatacataacacgcaaccttatccacaggataatc 18299103
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 2032 ccagtacccacataaattgggccctggataccatccaaacctttcatgtt 2081
|||||||||||||| | ||| ||||||||||||||||| || ||||||||
Sbjct: 15642616 ccagtacccacatatactggaccctggataccatccaaccccttcatgtt 15642665
Score = 60.0 bits (30), Expect = 3e-006
Identities = 120/150 (80%)
Strand = Plus / Plus
Query: 720 gatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaat 779
||||| ||||||||||| ||||||||| || || || || | |||||||||||||| ||
Sbjct: 15641078 gatcctgacccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgat 15641137
Query: 780 cgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgat 839
||||| || | ||| || || || | |||||| || | ||| ||||| |||||| | ||
Sbjct: 15641138 ggttggtgttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaat 15641197
Query: 840 cacccaaaatgcaaagaagagcttcccgaa 869
||||| || || |||||||||||||||||
Sbjct: 15641198 aacccataaggcgaagaagagcttcccgaa 15641227
Score = 52.0 bits (26), Expect = 7e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1078 tggaacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctc 1137
||||| || ||||||||||| | || || |||||||| ||||||||||| |||||||||
Sbjct: 10313281 tggaaaacggcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctc 10313340
Query: 1138 ca 1139
||
Sbjct: 10313341 ca 10313342
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2461 ggccatggagttccatcctgcattgtccatccttcctcagg 2501
||||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 15643383 ggccagggagtaccatcctgcattgtccagccttcttcagg 15643423
Score = 48.1 bits (24), Expect = 0.012
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2296 accaatgcattcatagcaccagccttcttgtg 2327
||||||||||||||||| |||||||| |||||
Sbjct: 15643137 accaatgcattcatagctccagcctttttgtg 15643168
Score = 48.1 bits (24), Expect = 0.012
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 2420 aaacctgaatcattccaggatgatcacggacattatttccgggccatggagttccatcct 2479
||||||||||||| || ||||| ||||| || || |||||||| | |||||||| |
Sbjct: 10314955 aaacctgaatcatcccgggatggtcacgagtgttgttcccgggccaagatgttccatctt 10315014
Query: 2480 gcattgtccatccttc 2495
||||||||||||||||
Sbjct: 10315015 gcattgtccatccttc 10315030
Score = 48.1 bits (24), Expect = 0.012
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1594 tcttttccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttc 1649
||||||||||| | ||||| ||||| |||||||| || |||||||| ||||||||
Sbjct: 10313956 tcttttccccattcagttttctcttcgtatccacagctaatgacatgaatagcttc 10314011
Score = 46.1 bits (23), Expect = 0.046
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatcca 1586
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 18300929 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatcca 18300871
Score = 46.1 bits (23), Expect = 0.046
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 2986 gcaaaccaaatttcacagatcacagatatgagccataaa 3024
||||||||||| ||||| ||||||||| | |||||||||
Sbjct: 10315708 gcaaaccaaatctcacatatcacagatgttagccataaa 10315746
Score = 44.1 bits (22), Expect = 0.18
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 2683 acccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagca 2742
||||||||||||||||| |||| |||||||| | | |||||| || ||||| || | |
Sbjct: 15643683 acccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaa 15643742
Query: 2743 ccatcatcagaaac 2756
|||||||| |||||
Sbjct: 15643743 ccatcatctgaaac 15643756
Score = 44.1 bits (22), Expect = 0.18
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 1426 ccaagagcccaccgaagaacctggtgaagacgatcggaaagattga 1471
||||||||||| || |||||||||||||| | ||| || |||||||
Sbjct: 10313715 ccaagagcccaacgtagaacctggtgaagcctatctgatagattga 10313760
>gb|AY136423.1| Arabidopsis thaliana cellulose synthase catalytic subunit (At5g09870)
mRNA, complete cds
Length = 1490
Score = 91.7 bits (46), Expect = 9e-016
Identities = 238/302 (78%)
Strand = Plus / Minus
Query: 1369 ccaccaccatacccataccagagagggcagtggttgctgaagaaaatttcaattgaacca 1428
||||| ||||| |||||||| | ||| || || |||| |||||||| |||| || ||
Sbjct: 491 ccacctccataaccataccaaataggacaatgtctgctcaagaaaatctcaacagacccg 432
Query: 1429 agagcccaccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctttg 1488
|| |||||||||||||| || |||||||| || |||||||||| |||||| || |||||
Sbjct: 431 agcgcccaccgaagaacttgatgaagacggtcagaaagattgataggtgctgatccttta 372
Query: 1489 aaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgcatcttaaac 1548
||||| | |||||| | ||||||| || | ||| ||||| | |||||||| ||
Sbjct: 371 aaggccggtatcttaggtgtacagtaaaccgatctccagccatgagaatgcatcttgaaa 312
Query: 1549 ccagtaagaatatcttctgtgactgatccataaatccaaccaatatcttttccccagcct 1608
|| ||||| ||||| || ||||| || || || ||||| ||||| ||||||||||| |
Sbjct: 311 cccgtaaggatatcctcggtgacagaaccgtagatccacccaatctcttttccccattcg 252
Query: 1609 gttttgtcttcatatccacaactgatgacatgtatagcttccttcagaagagaagctgga 1668
||||| ||||| ||||||||||| ||||| || || ||||| | || ||||||||||||
Sbjct: 251 gttttatcttcgtatccacaactaatgacttggatggcttctctaagcagagaagctgga 192
Query: 1669 ct 1670
||
Sbjct: 191 ct 190
Score = 71.9 bits (36), Expect = 8e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1086 agcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtc 1145
|||||||||||| | || || |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 774 agcaaagagatgagctgaaacacctccaatcacccaaaactgttcgtttctccaccaatc 715
Query: 1146 atcgatgcctac 1157
|||||| |||||
Sbjct: 714 atcgatccctac 703
Score = 48.1 bits (24), Expect = 0.012
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 800 tcccaaccagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaaga 859
|||||| |||||| || ||||| || || ||||||| ||| |||||||| |||||||| |
Sbjct: 1060 tcccaagcagacctttaaggaaaggatatagatggaggatgacccaaaaggcaaagaaca 1001
Query: 860 gcttcccgaacagggggccccatgattcatatccgttgttgatcgcat 907
| ||||| || || ||||| || ||||||||||| |||||||||
Sbjct: 1000 atcttccgaaaagaggaccccacgagtcatatccgttactgatcgcat 953
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1711 gcaacaaaaactgaagactggccaaatttcttttccaacttc 1752
||||||||||| | |||||| ||||| ||||| |||||||||
Sbjct: 149 gcaacaaaaacaggagactgtccaaacttcttctccaacttc 108
>dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3828
Score = 91.7 bits (46), Expect = 9e-016
Identities = 205/258 (79%)
Strand = Plus / Minus
Query: 2070 acctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatc 2129
|||||||||||| ||||| || || ||||| || | ||| | |||| |||||| | |||
Sbjct: 2104 acctttcatgttaatatcaaagaacacaacgttacggtttgagtatctatcatgtctatc 2045
Query: 2130 aatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatc 2189
||||||||||||||| || |||||||| ||||| |||||||||||||| || ||
Sbjct: 2044 aatcccatcaaatctctgcggaaactgaacataacaaactttctttcccgattgcgggtc 1985
Query: 2190 catcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaatc 2249
|||||| |||||||| | ||| | || || || || || ||||| ||||||||||||||
Sbjct: 1984 catcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcacaatc 1925
Query: 2250 caagttcagcaaataaggagcattagttagtacagcagagactcggaccaatgcattcat 2309
| || || | |||||||| || | ||| |||||||||||||||| ||| | ||||||
Sbjct: 1924 gacattaagaaggtaaggagcgtttgatagaacagcagagactcggatcaaggaattcat 1865
Query: 2310 agcaccagccttcttgtg 2327
||| ||||| ||||||||
Sbjct: 1864 agctccagctttcttgtg 1847
Score = 91.7 bits (46), Expect = 9e-016
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 2404 ccactttgaccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggc 2463
||||| ||||| | ||| |||||||||||||||||||| |||||||| || ||||| |||
Sbjct: 1770 ccactatgacccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggc 1711
Query: 2464 catggagttccatcctgcattgtccatccttcctcagg 2501
|| ||||||||||| ||||| ||||| | |||||||||
Sbjct: 1710 caaggagttccatcttgcatagtccaacgttcctcagg 1673
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 3042 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 2983
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 2982 tgcatttcgaggat 2969
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaa 1587
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 2622 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccac 2563
Query: 1588 ccaatatcttttcccca 1604
|| || |||||||||||
Sbjct: 2562 ccgatctcttttcccca 2546
Score = 44.1 bits (22), Expect = 0.18
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 1497 aaaggaacccattttgtagcaaaatcagctgtatcagagagagcttcaaatgtaagcata 1438
Query: 2737 gcagcaccat 2746
|| |||||||
Sbjct: 1437 gctgcaccat 1428
>emb|AX030944.1| Sequence 7 from Patent WO9800549
Length = 3828
Score = 91.7 bits (46), Expect = 9e-016
Identities = 205/258 (79%)
Strand = Plus / Minus
Query: 2070 acctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatc 2129
|||||||||||| ||||| || || ||||| || | ||| | |||| |||||| | |||
Sbjct: 2104 acctttcatgttaatatcaaagaacacaacgttacggtttgagtatctatcatgtctatc 2045
Query: 2130 aatcccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatc 2189
||||||||||||||| || |||||||| ||||| |||||||||||||| || ||
Sbjct: 2044 aatcccatcaaatctctgcggaaactgaacataacaaactttctttcccgattgcgggtc 1985
Query: 2190 catcataaaacacattgcttcctttatagccttactattattgatatagtgatcacaatc 2249
|||||| |||||||| | ||| | || || || || || ||||| ||||||||||||||
Sbjct: 1984 catcatgaaacacatagattctctaattgctttgctgttgttgatgtagtgatcacaatc 1925
Query: 2250 caagttcagcaaataaggagcattagttagtacagcagagactcggaccaatgcattcat 2309
| || || | |||||||| || | ||| |||||||||||||||| ||| | ||||||
Sbjct: 1924 gacattaagaaggtaaggagcgtttgatagaacagcagagactcggatcaaggaattcat 1865
Query: 2310 agcaccagccttcttgtg 2327
||| ||||| ||||||||
Sbjct: 1864 agctccagctttcttgtg 1847
Score = 91.7 bits (46), Expect = 9e-016
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 2404 ccactttgaccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggc 2463
||||| ||||| | ||| |||||||||||||||||||| |||||||| || ||||| |||
Sbjct: 1770 ccactatgacccaagaacacctgaatcattccaggatggtcacggacgttgtttccaggc 1711
Query: 2464 catggagttccatcctgcattgtccatccttcctcagg 2501
|| ||||||||||| ||||| ||||| | |||||||||
Sbjct: 1710 caaggagttccatcttgcatagtccaacgttcctcagg 1673
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1108 cctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccat 1167
||||| || |||||||||||||||||||||||||| |||||||| || ||||| | ||||
Sbjct: 3042 cctccgattacccaaaactgctcgtttctccaccaatcatcgattccgacacctccccat 2983
Query: 1168 ctcatttccaggat 1181
|||||| |||||
Sbjct: 2982 tgcatttcgaggat 2969
Score = 58.0 bits (29), Expect = 1e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1528 ccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataaatccaa 1587
|||||||| |||||||| || || || || |||||||| || || ||||||||||||||
Sbjct: 2622 ccatggcaatgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccac 2563
Query: 1588 ccaatatcttttcccca 1604
|| || |||||||||||
Sbjct: 2562 ccgatctcttttcccca 2546
Score = 44.1 bits (22), Expect = 0.18
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 2677 aaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatg 2736
|||||||||||||| | ||||| |||| ||| ||||| | ||||||||||| |||||
Sbjct: 1497 aaaggaacccattttgtagcaaaatcagctgtatcagagagagcttcaaatgtaagcata 1438
Query: 2737 gcagcaccat 2746
|| |||||||
Sbjct: 1437 gctgcaccat 1428
>gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complete cds
Length = 1041
Score = 91.7 bits (46), Expect = 9e-016
Identities = 238/302 (78%)
Strand = Plus / Minus
Query: 1369 ccaccaccatacccataccagagagggcagtggttgctgaagaaaatttcaattgaacca 1428
||||| ||||| |||||||| | ||| || || |||| |||||||| |||| || ||
Sbjct: 332 ccacctccataaccataccaaataggacaatgtctgctcaagaaaatctcaacagacccg 273
Query: 1429 agagcccaccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctttg 1488
|| |||||||||||||| || |||||||| || |||||||||| |||||| || |||||
Sbjct: 272 agcgcccaccgaagaacttgatgaagacggtcagaaagattgataggtgctgatccttta 213
Query: 1489 aaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgcatcttaaac 1548
||||| | |||||| | ||||||| || | ||| ||||| | |||||||| ||
Sbjct: 212 aaggccggtatcttaggtgtacagtaaaccgatctccagccatgagaatgcatcttgaaa 153
Query: 1549 ccagtaagaatatcttctgtgactgatccataaatccaaccaatatcttttccccagcct 1608
|| ||||| ||||| || ||||| || || || ||||| ||||| ||||||||||| |
Sbjct: 152 cccgtaaggatatcctcggtgacagaaccgtagatccacccaatctcttttccccattcg 93
Query: 1609 gttttgtcttcatatccacaactgatgacatgtatagcttccttcagaagagaagctgga 1668
||||| ||||| ||||||||||| ||||| || || ||||| | || ||||||||||||
Sbjct: 92 gttttatcttcgtatccacaactaatgacttggatggcttctctaagcagagaagctgga 33
Query: 1669 ct 1670
||
Sbjct: 32 ct 31
Score = 71.9 bits (36), Expect = 8e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1086 agcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtc 1145
|||||||||||| | || || |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 615 agcaaagagatgagctgaaacacctccaatcacccaaaactgttcgtttctccaccaatc 556
Query: 1146 atcgatgcctac 1157
|||||| |||||
Sbjct: 555 atcgatccctac 544
Score = 48.1 bits (24), Expect = 0.012
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 800 tcccaaccagacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaaga 859
|||||| |||||| || ||||| || || ||||||| ||| |||||||| |||||||| |
Sbjct: 901 tcccaagcagacctttaaggaaaggatatagatggaggatgacccaaaaggcaaagaaca 842
Query: 860 gcttcccgaacagggggccccatgattcatatccgttgttgatcgcat 907
| ||||| || || ||||| || ||||||||||| |||||||||
Sbjct: 841 atcttccgaaaagaggaccccacgagtcatatccgttactgatcgcat 794
>emb|AL758408.1| Arabidopsis thaliana T-DNA flanking sequence GK-158D06-013215,
genomic survey sequence
Length = 318
Score = 89.7 bits (45), Expect = 3e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
|||||||||||||||||||||||||||||||| || || |||||||| |||||||| |||
Sbjct: 245 ccaatgacccaaaactgctcgtttctccaccattcgtctatgcctacgccactccacctc 304
Query: 1171 atttc 1175
|||||
Sbjct: 305 atttc 309
>gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA
clone 701498975, mRNA sequence
Length = 534
Score = 89.7 bits (45), Expect = 3e-015
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 1111 ccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccactccatctc 1170
|||||||||||||||||||||||||||||||| || || |||||||| |||||||| |||
Sbjct: 216 ccaatgacccaaaactgctcgtttctccaccattcgtctatgcctacgccactccacctc 157
Query: 1171 atttc 1175
|||||
Sbjct: 156 atttc 152
Score = 44.1 bits (22), Expect = 0.18
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 810 acccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaa 869
|||||||||||| ||||| | || || ||||||||||| |||||||| | ||| || ||
Sbjct: 520 acccttgaggaaagggtacaagtgaacaatcacccaaaaggcaaagaacaacttgccaaa 461
Query: 870 cagggggccccatgattcatatccgttgttgatcgcat 907
|| || |||||||||| ||||| ||||||| ||||
Sbjct: 460 gagtggtccccatgattggtatccactgttgatagcat 423
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,126,826
Number of Sequences: 1013581
Number of extensions: 2126826
Number of successful extensions: 179659
Number of sequences better than 0.5: 226
Number of HSP's better than 0.5 without gapping: 221
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 159703
Number of HSP's gapped (non-prelim): 19812
length of query: 3878
length of database: 908,940,872
effective HSP length: 21
effective length of query: 3857
effective length of database: 887,655,671
effective search space: 3423687923047
effective search space used: 3423687923047
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)