BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805363.2.1
(2856 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-g... 450 e-124
emb|AX030942.1| Sequence 5 from Patent WO9800549 450 e-124
gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R1... 450 e-124
ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNT... 450 e-124
ref|NM_128111.2| Arabidopsis thaliana CESA10 (CELLULASE SYN... 444 e-122
dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-g... 442 e-121
emb|AX030948.1| Sequence 11 from Patent WO9800549 442 e-121
gb|CK120272.1|CK120272 207o02.p1 AtM1 Arabidopsis thaliana ... 289 1e-075
dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-g... 250 1e-063
emb|AX030938.1| Sequence 1 from Patent WO9800549 250 1e-063
gb|AV547629.1|AV547629 AV547629 Arabidopsis thaliana roots ... 234 7e-059
gb|AV530113.1|AV530113 AV530113 Arabidopsis thaliana aboveg... 220 1e-054
gb|AV528526.1|AV528526 AV528526 Arabidopsis thaliana aboveg... 170 9e-040
gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synth... 170 9e-040
dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-g... 170 9e-040
emb|AX030940.1| Sequence 3 from Patent WO9800549 170 9e-040
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 170 9e-040
emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4... 170 9e-040
emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosom... 170 9e-040
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 170 9e-040
gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synth... 163 2e-037
dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-g... 163 2e-037
emb|AX505864.1| Sequence 559 from Patent WO0216655 163 2e-037
emb|AX030944.1| Sequence 7 from Patent WO9800549 163 2e-037
gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B... 163 2e-037
ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synt... 163 2e-037
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 163 2e-037
gb|CB255846.1|CB255846 17-E011665-027-006-B05-T7R MPIZ-ADIS... 153 2e-034
gb|AV552509.1|AV552509 AV552509 Arabidopsis thaliana roots ... 147 1e-032
dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose syn... 147 1e-032
gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synth... 131 7e-028
gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synth... 131 7e-028
gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA... 131 7e-028
gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene... 131 7e-028
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 131 7e-028
emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome ... 131 7e-028
ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM... 131 7e-028
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 131 7e-028
gb|BE530485.1|BE530485 M77N01STM Arabidopsis developing see... 129 3e-027
gb|AV550172.1|AV550172 AV550172 Arabidopsis thaliana roots ... 129 3e-027
gb|CF651830.1|CF651830 17-L020525-066-003-B05-SP6P MPIZ-ADI... 125 5e-026
ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G1... 125 5e-026
ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G1... 125 5e-026
dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose syn... 123 2e-025
gb|CC794586.1|CC794586 SALK_052533.32.20.x Arabidopsis thal... 121 7e-025
gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synth... 121 7e-025
emb|AX507835.1| Sequence 2530 from Patent WO0216655 121 7e-025
emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cD... 121 7e-025
dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosom... 121 7e-025
ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNT... 121 7e-025
gb|CB261308.1|CB261308 08-E9409-012-002-P13-t7r MPIZ-ADIS-0... 115 4e-023
gb|CD534481.1|CD534481 39I11 Arabidopsis Leaf Senescence Li... 115 4e-023
gb|CK121679.1|CK121679 202d06.p1 AtM1 Arabidopsis thaliana ... 115 4e-023
gb|AV442267.1|AV442267 AV442267 Arabidopsis thaliana above-... 113 2e-022
dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosom... 113 2e-022
ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNT... 113 2e-022
gb|N96792.1|N96792 21978 Lambda-PRL1 Arabidopsis thaliana c... 111 7e-022
gb|AA650885.1|AA650885 30999 Lambda-PRL2 Arabidopsis thalia... 107 1e-020
gb|N96707.1|N96707 21510 CD4-15 Arabidopsis thaliana cDNA c... 107 1e-020
gb|AV823575.1|AV823575 AV823575 RAFL5 Arabidopsis thaliana ... 107 1e-020
emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cD... 107 1e-020
gb|AV529187.1|AV529187 AV529187 Arabidopsis thaliana aboveg... 103 2e-019
gb|BP831231.1|BP831231 BP831231 RAFL19 Arabidopsis thaliana... 103 2e-019
gb|BP837495.1|BP837495 BP837495 RAFL19 Arabidopsis thaliana... 100 3e-018
emb|AJ838254.1| Arabidopsis thaliana T-DNA flanking sequenc... 100 3e-018
gb|T20516.1|T20516 2524 Lambda-PRL2 Arabidopsis thaliana cD... 98 1e-017
gb|AV782576.1|AV782576 AV782576 RAFL4 Arabidopsis thaliana ... 98 1e-017
gb|AV538027.1|AV538027 AV538027 Arabidopsis thaliana roots ... 98 1e-017
gb|AV546309.1|AV546309 AV546309 Arabidopsis thaliana roots ... 98 1e-017
gb|AV552905.1|AV552905 AV552905 Arabidopsis thaliana roots ... 98 1e-017
gb|BP824749.1|BP824749 BP824749 RAFL19 Arabidopsis thaliana... 98 1e-017
gb|BZ769710.1|BZ769710 SALK_142637.45.60.n Arabidopsis thal... 96 4e-017
emb|AL771826.1| Arabidopsis thaliana T-DNA flanking sequenc... 96 4e-017
gb|CW794531.1|CW794531 WiscDsLox364G07 Arabidopsis thaliana... 96 4e-017
gb|BU635836.1|BU635836 039C03 Infected Arabidopsis Leaf Ara... 96 4e-017
gb|CB074343.1|CB074343 EST00858 Virulent Peronospora parasi... 96 4e-017
gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synth... 96 4e-017
dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-g... 96 4e-017
emb|AX030946.1| Sequence 9 from Patent WO9800549 96 4e-017
gb|BT002335.1| Arabidopsis thaliana clone C104938 putative ... 96 4e-017
emb|BX821788.1|CNS0A924 Arabidopsis thaliana Full-length cD... 96 4e-017
dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosom... 96 4e-017
ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNT... 96 4e-017
ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNT... 96 4e-017
gb|AV546311.1|AV546311 AV546311 Arabidopsis thaliana roots ... 94 2e-016
dbj|BD022675.1| Manipulation of cellulose and/or beta-1,4-g... 94 2e-016
emb|AX030941.1| Sequence 4 from Patent WO9800549 94 2e-016
emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome ... 94 2e-016
emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosom... 94 2e-016
gb|AV546312.1|AV546312 AV546312 Arabidopsis thaliana roots ... 92 6e-016
gb|CB253730.1|CB253730 90-E010932-019-003-C24-T7R MPIZ-ADIS... 92 6e-016
gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8... 92 6e-016
gb|AV523139.1|AV523139 AV523139 Arabidopsis thaliana aboveg... 90 3e-015
emb|BX829135.1|CNS0A3FB Arabidopsis thaliana Full-length cD... 90 3e-015
gb|BH252912.1|BH252912 SALK_014134 Arabidopsis thaliana TDN... 88 1e-014
gb|CW794257.1|CW794257 WiscDsLox358C09 Arabidopsis thaliana... 88 1e-014
gb|BE038216.1|BE038216 AA10E02 AA Arabidopsis thaliana cDNA... 88 1e-014
gb|AV823492.1|AV823492 AV823492 RAFL5 Arabidopsis thaliana ... 88 1e-014
gb|AV523438.1|AV523438 AV523438 Arabidopsis thaliana aboveg... 88 1e-014
gb|AV523635.1|AV523635 AV523635 Arabidopsis thaliana aboveg... 88 1e-014
gb|AV530046.1|AV530046 AV530046 Arabidopsis thaliana aboveg... 88 1e-014
gb|AV546683.1|AV546683 AV546683 Arabidopsis thaliana roots ... 88 1e-014
gb|AV547198.1|AV547198 AV547198 Arabidopsis thaliana roots ... 88 1e-014
gb|AY045960.1| Arabidopsis thaliana putative cellulose synt... 88 1e-014
emb|BX833092.1|CNS0A0FM Arabidopsis thaliana Full-length cD... 88 1e-014
emb|BX833785.1|CNS0A0C4 Arabidopsis thaliana Full-length cD... 88 1e-014
gb|AV523533.1|AV523533 AV523533 Arabidopsis thaliana aboveg... 86 4e-014
gb|AV566035.1|AV566035 AV566035 Arabidopsis thaliana green ... 86 4e-014
gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synth... 86 4e-014
gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like... 86 4e-014
emb|BX822015.1|CNS0AAAJ Arabidopsis thaliana Full-length cD... 86 4e-014
ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNT... 86 4e-014
emb|AL758408.1| Arabidopsis thaliana T-DNA flanking sequenc... 84 2e-013
emb|BX948437.1| Arabidopsis thaliana T-DNA flanking sequenc... 84 2e-013
gb|T20782.1|T20782 2790 Lambda-PRL2 Arabidopsis thaliana cD... 84 2e-013
gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State cl... 84 2e-013
gb|AV536569.1|AV536569 AV536569 Arabidopsis thaliana liquid... 80 2e-012
gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, ... 80 2e-012
gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, ... 80 2e-012
gb|BH748699.1|BH748699 SALK_046453.54.75.x Arabidopsis thal... 78 1e-011
gb|AV523143.1|AV523143 AV523143 Arabidopsis thaliana aboveg... 78 1e-011
gb|AV528856.1|AV528856 AV528856 Arabidopsis thaliana aboveg... 76 4e-011
gb|BP841009.1|BP841009 BP841009 RAFL19 Arabidopsis thaliana... 76 4e-011
gb|AY059858.1| Arabidopsis thaliana cellulose synthase cata... 76 4e-011
gb|CC887589.1|CC887589 SALK_150405.56.00.x Arabidopsis thal... 74 1e-010
gb|BE521782.1|BE521782 M21E12STM Arabidopsis developing see... 74 1e-010
gb|BP617268.1|BP617268 BP617268 RAFL16 Arabidopsis thaliana... 74 1e-010
gb|BP819896.1|BP819896 BP819896 RAFL19 Arabidopsis thaliana... 74 1e-010
gb|AY093308.1| Arabidopsis thaliana cellulose synthase cata... 74 1e-010
gb|AV830043.1|AV830043 AV830043 RAFL9 Arabidopsis thaliana ... 72 6e-010
gb|AV529432.1|AV529432 AV529432 Arabidopsis thaliana aboveg... 72 6e-010
gb|AV529461.1|AV529461 AV529461 Arabidopsis thaliana aboveg... 72 6e-010
gb|H36425.1|H36425 14093 Lambda-PRL2 Arabidopsis thaliana c... 70 2e-009
gb|AV562949.1|AV562949 AV562949 Arabidopsis thaliana green ... 70 2e-009
gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX... 70 2e-009
gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R5... 70 2e-009
gb|BT006111.1| Arabidopsis thaliana clone U50150 putative c... 70 2e-009
dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosom... 70 2e-009
ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNT... 70 2e-009
emb|CR396441.1| Arabidopsis thaliana T-DNA flanking sequenc... 68 9e-009
emb|CR401305.1| Arabidopsis thaliana T-DNA flanking sequenc... 68 9e-009
gb|BH753096.1|BH753096 SALK_019756.53.00.x Arabidopsis thal... 66 4e-008
gb|B24204.1|B24204 F19F17TF IGF Arabidopsis thaliana genomi... 64 1e-007
gb|BH611908.1|BH611908 SALK_031874 Arabidopsis thaliana TDN... 64 1e-007
gb|AV537459.1|AV537459 AV537459 Arabidopsis thaliana roots ... 64 1e-007
gb|AV545907.1|AV545907 AV545907 Arabidopsis thaliana roots ... 64 1e-007
gb|AV546317.1|AV546317 AV546317 Arabidopsis thaliana roots ... 64 1e-007
gb|AV560817.1|AV560817 AV560817 Arabidopsis thaliana green ... 64 1e-007
gb|B67810.1|B67810 T24H20TR TAMU Arabidopsis thaliana genom... 60 2e-006
gb|BP832279.1|BP832279 BP832279 RAFL19 Arabidopsis thaliana... 60 2e-006
emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome... 60 2e-006
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 60 2e-006
gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana ... 58 9e-006
gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana ... 58 9e-006
gb|BP582979.1|BP582979 BP582979 RAFL14 Arabidopsis thaliana... 58 9e-006
gb|N96884.1|N96884 21830 Lambda-PRL1 Arabidopsis thaliana c... 56 3e-005
gb|AV806728.1|AV806728 AV806728 RAFL9 Arabidopsis thaliana ... 56 3e-005
gb|AV439681.1|AV439681 AV439681 Arabidopsis thaliana above-... 56 3e-005
gb|AV518616.1|AV518616 AV518616 Arabidopsis thaliana aboveg... 56 3e-005
gb|AV544042.1|AV544042 AV544042 Arabidopsis thaliana roots ... 56 3e-005
gb|AV545922.1|AV545922 AV545922 Arabidopsis thaliana roots ... 56 3e-005
gb|BP608218.1|BP608218 BP608218 RAFL16 Arabidopsis thaliana... 56 3e-005
gb|AY136423.1| Arabidopsis thaliana cellulose synthase cata... 56 3e-005
gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complet... 56 3e-005
gb|BZ766414.1|BZ766414 SALK_137389.45.80.x Arabidopsis thal... 54 1e-004
gb|AV529949.1|AV529949 AV529949 Arabidopsis thaliana aboveg... 54 1e-004
gb|AV560162.1|AV560162 AV560162 Arabidopsis thaliana green ... 54 1e-004
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 54 1e-004
gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16... 54 1e-004
gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BA... 54 1e-004
ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose sy... 54 1e-004
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 54 1e-004
gb|BH902267.1|BH902267 SALK_091568.32.80.x Arabidopsis thal... 52 5e-004
gb|CL460544.1|CL460544 SAIL_107_E07.v1 SAIL Collection Arab... 52 5e-004
emb|BX649822.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 5e-004
gb|AI999519.1|AI999519 701556274 A. thaliana, Columbia Col-... 52 5e-004
gb|AV782896.1|AV782896 AV782896 RAFL5 Arabidopsis thaliana ... 52 5e-004
gb|AV806463.1|AV806463 AV806463 RAFL9 Arabidopsis thaliana ... 52 5e-004
gb|AV523011.1|AV523011 AV523011 Arabidopsis thaliana aboveg... 52 5e-004
gb|BP614740.1|BP614740 BP614740 RAFL16 Arabidopsis thaliana... 52 5e-004
gb|BP640849.1|BP640849 BP640849 RAFL19 Arabidopsis thaliana... 52 5e-004
gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis tha... 52 5e-004
emb|AJ834251.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 5e-004
gb|CL468735.1|CL468735 SAIL_1290b_D01.v1 SAIL Collection Ar... 50 0.002
gb|T45311.1|T45311 8574 Lambda-PRL2 Arabidopsis thaliana cD... 48 0.009
gb|BP581479.1|BP581479 BP581479 RAFL14 Arabidopsis thaliana... 48 0.009
gb|BP811914.1|BP811914 BP811914 RAFL19 Arabidopsis thaliana... 48 0.009
gb|BP836287.1|BP836287 BP836287 RAFL19 Arabidopsis thaliana... 48 0.009
gb|BP837778.1|BP837778 BP837778 RAFL19 Arabidopsis thaliana... 48 0.009
gb|CC458575.1|CC458575 SALK_119808.46.70.x Arabidopsis thal... 46 0.034
gb|CL469416.1|CL469416 SAIL_1303_D08.v1 SAIL Collection Ara... 46 0.034
gb|CW801166.1|CW801166 WiscDsLox293-296invG24 Arabidopsis t... 46 0.034
gb|AA042439.1|AA042439 24744 CD4-16 Arabidopsis thaliana cD... 46 0.034
gb|AV530048.1|AV530048 AV530048 Arabidopsis thaliana aboveg... 46 0.034
gb|BP602343.1|BP602343 BP602343 RAFL16 Arabidopsis thaliana... 46 0.034
emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome ... 46 0.034
ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose sy... 46 0.034
emb|CR395103.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.13
gb|AI995332.1|AI995332 701673135 A. thaliana, Columbia Col-... 44 0.13
gb|AV546144.1|AV546144 AV546144 Arabidopsis thaliana roots ... 44 0.13
dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosom... 44 0.13
gb|AQ955592.1|AQ955592 LERAE88TF LERA Arabidopsis thaliana ... 42 0.53
gb|AQ955593.1|AQ955593 LERAE88TR LERA Arabidopsis thaliana ... 42 0.53
emb|AL951915.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.53
emb|BX002729.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.53
emb|BX546656.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.53
gb|H36985.1|H36985 15114 Lambda-PRL2 Arabidopsis thaliana c... 42 0.53
gb|AV822205.1|AV822205 AV822205 RAFL5 Arabidopsis thaliana ... 42 0.53
gb|AV527222.1|AV527222 AV527222 Arabidopsis thaliana aboveg... 42 0.53
gb|CK117572.1|CK117572 215o03.p1 AtM1 Arabidopsis thaliana ... 42 0.53
gb|CK119314.1|CK119314 204i17.p1 AtM1 Arabidopsis thaliana ... 42 0.53
gb|BP804496.1|BP804496 BP804496 RAFL16 Arabidopsis thaliana... 42 0.53
emb|BX829237.1|CNS0A4ID Arabidopsis thaliana Full-length cD... 42 0.53
gb|B61152.1|B61152 T20O6TF TAMU Arabidopsis thaliana genomi... 40 2.1
gb|BH902269.1|BH902269 SALK_091570.47.60.x Arabidopsis thal... 40 2.1
gb|CL482395.1|CL482395 SAIL_360_A05.v1 SAIL Collection Arab... 40 2.1
emb|AL951949.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 2.1
emb|BX572207.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 2.1
gb|CW844332.1|CW844332 GT10903.Ds5.07.29.2004.jx81.865 Arab... 40 2.1
gb|Z30729.1|Z30729 ATTS2475 Versailles-VB Arabidopsis thali... 40 2.1
gb|AF360180.1| Arabidopsis thaliana putative cellulose synt... 40 2.1
gb|AY039996.1| Arabidopsis thaliana putative cellulose synt... 40 2.1
emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene fo... 40 2.1
gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome II... 40 2.1
gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome II... 40 2.1
gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I... 40 2.1
dbj|AK175868.1| Arabidopsis thaliana mRNA for putative cell... 40 2.1
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 40 2.1
ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNT... 40 2.1
ref|NM_128870.3| Arabidopsis thaliana ATCSLD1; cellulose sy... 40 2.1
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 40 2.1
emb|AL093113.1|CNS00W4B Arabidopsis thaliana genome survey ... 38 8.2
gb|BH865757.1|BH865757 SALK_099805 Arabidopsis thaliana TDN... 38 8.2
emb|AL765187.1| Arabidopsis thaliana T-DNA flanking sequenc... 38 8.2
gb|N96510.1|N96510 21201 CD4-14 Arabidopsis thaliana cDNA c... 38 8.2
gb|AI992761.1|AI992761 701493456 A. thaliana, Ohio State cl... 38 8.2
gb|AI993628.1|AI993628 701496831 A. thaliana, Ohio State cl... 38 8.2
gb|AV807703.1|AV807703 AV807703 RAFL9 Arabidopsis thaliana ... 38 8.2
gb|AU237456.1|AU237456 AU237456 RAFL16 Arabidopsis thaliana... 38 8.2
gb|CB260305.1|CB260305 81-E9600-013-003-A21-t7r MPIZ-ADIS-0... 38 8.2
gb|AV553463.1|AV553463 AV553463 Arabidopsis thaliana roots ... 38 8.2
gb|BP570054.1|BP570054 BP570054 RAFL14 Arabidopsis thaliana... 38 8.2
gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synth... 38 8.2
emb|AJ520593.1|ATH520593 Arabidopsis thaliana T-DNA flankin... 38 8.2
gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K... 38 8.2
dbj|AB006698.1| Arabidopsis thaliana genomic DNA, chromosom... 38 8.2
ref|NM_001035868.1| Arabidopsis thaliana unknown protein AT... 38 8.2
ref|NM_126252.3| Arabidopsis thaliana unknown protein AT2G0... 38 8.2
>dbj|BD022676.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3603
Score = 450 bits (227), Expect = e-124
Identities = 906/1133 (79%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 1951 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 1892
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || || || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 1891 ccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaaaagacta 1832
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 1831 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 1772
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 1771 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 1712
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 1711 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 1652
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||||| ||||| || ||||| |||||||| || |||||||| |||||||| || || |
Sbjct: 1651 gaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgttgaaatc 1592
Query: 2040 ctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaa 2099
| |||| |||||||||||||||||| | || | |||| |||||| ||||| || || |
Sbjct: 1591 caggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcggtatcca 1532
Query: 2100 gcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattcc 2159
| || ||||| ||||| ||||| || || |||||||| ||||||||||||| ||| || |
Sbjct: 1531 gacccccactatggcctaagaacacctgtatcattccaggatgatctctagtgttgttac 1472
Query: 2160 caggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttg 2219
||||||| ||||| ||||| ||| |||||||| || ||||| ||||| || ||||| |
Sbjct: 1471 caggccagggagtaccatcctgcattgtccagccttcttcagggattttctgtgctttgg 1412
Query: 2220 caacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccgccttt 2279
||||||| |||| |||| ||||| |||||||||||||| ||||||||||| || | |
Sbjct: 1411 caacaagagcatttatcctcactttaaactcttcatactctctcttcatagctcgtcgct 1352
Query: 2280 ctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaa 2339
|||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| || |
Sbjct: 1351 ctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaataga 1292
Query: 2340 actctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaa 2399
| || || |||||||||||||||||| |||||||||||| || ||||||||| ||||||
Sbjct: 1291 attcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgcaa 1232
Query: 2400 actctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacat 2459
|||| ||||||||||| || | |||||| || | |||||||||||| ||||| |||||||
Sbjct: 1231 actcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaacat 1172
Query: 2460 aacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccag 2519
|||| | |||||| || || ||||| ||||||| |||||| || || || ||||| | |
Sbjct: 1171 aacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgctg 1112
Query: 2520 taattagaggaggttccttaagtggatccactgtactaacaaagacatcgattggagcca 2579
||| || ||||| || || | ||| ||||||||||||||||| ||||| | ||| | |
Sbjct: 1111 taacaaggggaggctctttcaatgggtccactgtactaacaaacacatcaacaggaacga 1052
Query: 2580 actgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcac 2639
||| ||||| ||||| || | ||||||||| | || || | || || ||||| || |
Sbjct: 1051 gctgtgatggttcaccgtctcgatcatatcttatagcgagacggtcaagataagtctccc 992
Query: 2640 ggttgataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaactt 2699
||| || || ||||| || || |||||||| ||||||||||| || |||||||| | |
Sbjct: 991 tgttaatggggtaccatttgggaaactgatcaagaagccaagaaaatgcaaaccagatct 932
Query: 2700 cacaaataacagatacaagccacaacccataagcatcttccactggatgagttatacgat 2759
|||| ||||| || | |||||| ||| |||| || ||| || |||||| ||||||
Sbjct: 931 cacagataaccgaggtcaaccacaaaggatatgcatttttcacagggtgagttgtacgat 872
Query: 2760 attgaaagaagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| ||||||||||| | ||||||||||||||||| |||||| | |||||||
Sbjct: 871 attgcaagaagaaacacaagatgataagccggagaataatcacaacccgataa 819
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 2594 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 2535
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 2534 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 2475
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 2474 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 2415
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 2414 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 2355
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 2354 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 2295
Query: 1330 tc 1331
||
Sbjct: 2294 tc 2293
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 2936 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 2877
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 2876 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 2817
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 2816 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 2757
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 2756 tcctcaatgctcacaccgctccatctcagctcca 2723
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 3176 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 3117
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 3116 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 3057
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 3056 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 2997
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 2996 taagagacaccagccac 2980
>emb|AX030942.1| Sequence 5 from Patent WO9800549
Length = 3603
Score = 450 bits (227), Expect = e-124
Identities = 906/1133 (79%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 1951 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 1892
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || || || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 1891 ccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaaaagacta 1832
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 1831 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 1772
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 1771 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 1712
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 1711 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 1652
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||||| ||||| || ||||| |||||||| || |||||||| |||||||| || || |
Sbjct: 1651 gaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgttgaaatc 1592
Query: 2040 ctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaa 2099
| |||| |||||||||||||||||| | || | |||| |||||| ||||| || || |
Sbjct: 1591 caggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcggtatcca 1532
Query: 2100 gcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattcc 2159
| || ||||| ||||| ||||| || || |||||||| ||||||||||||| ||| || |
Sbjct: 1531 gacccccactatggcctaagaacacctgtatcattccaggatgatctctagtgttgttac 1472
Query: 2160 caggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttg 2219
||||||| ||||| ||||| ||| |||||||| || ||||| ||||| || ||||| |
Sbjct: 1471 caggccagggagtaccatcctgcattgtccagccttcttcagggattttctgtgctttgg 1412
Query: 2220 caacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccgccttt 2279
||||||| |||| |||| ||||| |||||||||||||| ||||||||||| || | |
Sbjct: 1411 caacaagagcatttatcctcactttaaactcttcatactctctcttcatagctcgtcgct 1352
Query: 2280 ctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaa 2339
|||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| || |
Sbjct: 1351 ctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaataga 1292
Query: 2340 actctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaa 2399
| || || |||||||||||||||||| |||||||||||| || ||||||||| ||||||
Sbjct: 1291 attcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgcaa 1232
Query: 2400 actctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacat 2459
|||| ||||||||||| || | |||||| || | |||||||||||| ||||| |||||||
Sbjct: 1231 actcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaacat 1172
Query: 2460 aacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccag 2519
|||| | |||||| || || ||||| ||||||| |||||| || || || ||||| | |
Sbjct: 1171 aacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgctg 1112
Query: 2520 taattagaggaggttccttaagtggatccactgtactaacaaagacatcgattggagcca 2579
||| || ||||| || || | ||| ||||||||||||||||| ||||| | ||| | |
Sbjct: 1111 taacaaggggaggctctttcaatgggtccactgtactaacaaacacatcaacaggaacga 1052
Query: 2580 actgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcac 2639
||| ||||| ||||| || | ||||||||| | || || | || || ||||| || |
Sbjct: 1051 gctgtgatggttcaccgtctcgatcatatcttatagcgagacggtcaagataagtctccc 992
Query: 2640 ggttgataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaactt 2699
||| || || ||||| || || |||||||| ||||||||||| || |||||||| | |
Sbjct: 991 tgttaatggggtaccatttgggaaactgatcaagaagccaagaaaatgcaaaccagatct 932
Query: 2700 cacaaataacagatacaagccacaacccataagcatcttccactggatgagttatacgat 2759
|||| ||||| || | |||||| ||| |||| || ||| || |||||| ||||||
Sbjct: 931 cacagataaccgaggtcaaccacaaaggatatgcatttttcacagggtgagttgtacgat 872
Query: 2760 attgaaagaagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| ||||||||||| | ||||||||||||||||| |||||| | |||||||
Sbjct: 871 attgcaagaagaaacacaagatgataagccggagaataatcacaacccgataa 819
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 2594 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 2535
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 2534 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 2475
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 2474 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 2415
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 2414 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 2355
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 2354 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 2295
Query: 1330 tc 1331
||
Sbjct: 2294 tc 2293
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 2936 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 2877
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 2876 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 2817
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 2816 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 2757
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 2756 tcctcaatgctcacaccgctccatctcagctcca 2723
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 3176 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 3117
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 3116 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 3057
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 3056 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 2997
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 2996 taagagacaccagccac 2980
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose
synthase catalytic subunit (RSW1) (At4g32410) mRNA,
complete cds
Length = 3763
Score = 450 bits (227), Expect = e-124
Identities = 906/1133 (79%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 2095 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 2036
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || || || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 2035 ccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaaaagacta 1976
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 1975 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 1916
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 1915 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 1856
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 1855 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 1796
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||||| ||||| || ||||| |||||||| || |||||||| |||||||| || || |
Sbjct: 1795 gaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgttgaaatc 1736
Query: 2040 ctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaa 2099
| |||| |||||||||||||||||| | || | |||| |||||| ||||| || || |
Sbjct: 1735 caggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcggtatcca 1676
Query: 2100 gcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattcc 2159
| || ||||| ||||| ||||| || || |||||||| ||||||||||||| ||| || |
Sbjct: 1675 gacccccactatggcctaagaacacctgtatcattccaggatgatctctagtgttgttac 1616
Query: 2160 caggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttg 2219
||||||| ||||| ||||| ||| |||||||| || ||||| ||||| || ||||| |
Sbjct: 1615 caggccagggagtaccatcctgcattgtccagccttcttcagggattttctgtgctttgg 1556
Query: 2220 caacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccgccttt 2279
||||||| |||| |||| ||||| |||||||||||||| ||||||||||| || | |
Sbjct: 1555 caacaagagcatttatcctcactttaaactcttcatactctctcttcatagctcgtcgct 1496
Query: 2280 ctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaa 2339
|||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| || |
Sbjct: 1495 ctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaataga 1436
Query: 2340 actctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaa 2399
| || || |||||||||||||||||| |||||||||||| || ||||||||| ||||||
Sbjct: 1435 attcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgcaa 1376
Query: 2400 actctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacat 2459
|||| ||||||||||| || | |||||| || | |||||||||||| ||||| |||||||
Sbjct: 1375 actcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaacat 1316
Query: 2460 aacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccag 2519
|||| | |||||| || || ||||| ||||||| |||||| || || || ||||| | |
Sbjct: 1315 aacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgctg 1256
Query: 2520 taattagaggaggttccttaagtggatccactgtactaacaaagacatcgattggagcca 2579
||| || ||||| || || | ||| ||||||||||||||||| ||||| | ||| | |
Sbjct: 1255 taacaaggggaggctctttcaatgggtccactgtactaacaaacacatcaacaggaacga 1196
Query: 2580 actgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcac 2639
||| ||||| ||||| || | ||||||||| | || || | || || ||||| || |
Sbjct: 1195 gctgtgatggttcaccgtctcgatcatatcttatagcgagacggtcaagataagtctccc 1136
Query: 2640 ggttgataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaactt 2699
||| || || ||||| || || |||||||| ||||||||||| || |||||||| | |
Sbjct: 1135 tgttaatggggtaccatttgggaaactgatcaagaagccaagaaaatgcaaaccagatct 1076
Query: 2700 cacaaataacagatacaagccacaacccataagcatcttccactggatgagttatacgat 2759
|||| ||||| || | |||||| ||| |||| || ||| || |||||| ||||||
Sbjct: 1075 cacagataaccgaggtcaaccacaaaggatatgcatttttcacagggtgagttgtacgat 1016
Query: 2760 attgaaagaagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| ||||||||||| | ||||||||||||||||| |||||| | |||||||
Sbjct: 1015 attgcaagaagaaacacaagatgataagccggagaataatcacaacccgataa 963
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 2738 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 2679
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 2678 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 2619
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 2618 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 2559
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 2558 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 2499
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 2498 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 2439
Query: 1330 tc 1331
||
Sbjct: 2438 tc 2437
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 3080 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 3021
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 3020 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 2961
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 2960 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 2901
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 2900 tcctcaatgctcacaccgctccatctcagctcca 2867
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 3320 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 3261
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 3260 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 3201
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 3200 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 3141
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 3140 taagagacaccagccac 3124
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase,
transferring glycosyl groups AT4G32410 (CESA1) mRNA,
complete cds
Length = 3912
Score = 450 bits (227), Expect = e-124
Identities = 906/1133 (79%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 2228 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 2169
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || || || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 2168 ccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaaaagacta 2109
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 2108 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 2049
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 2048 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 1989
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 1988 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 1929
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||||| ||||| || ||||| |||||||| || |||||||| |||||||| || || |
Sbjct: 1928 gaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgttgaaatc 1869
Query: 2040 ctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaa 2099
| |||| |||||||||||||||||| | || | |||| |||||| ||||| || || |
Sbjct: 1868 caggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcggtatcca 1809
Query: 2100 gcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattcc 2159
| || ||||| ||||| ||||| || || |||||||| ||||||||||||| ||| || |
Sbjct: 1808 gacccccactatggcctaagaacacctgtatcattccaggatgatctctagtgttgttac 1749
Query: 2160 caggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttg 2219
||||||| ||||| ||||| ||| |||||||| || ||||| ||||| || ||||| |
Sbjct: 1748 caggccagggagtaccatcctgcattgtccagccttcttcagggattttctgtgctttgg 1689
Query: 2220 caacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccgccttt 2279
||||||| |||| |||| ||||| |||||||||||||| ||||||||||| || | |
Sbjct: 1688 caacaagagcatttatcctcactttaaactcttcatactctctcttcatagctcgtcgct 1629
Query: 2280 ctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaa 2339
|||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| || |
Sbjct: 1628 ctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaataga 1569
Query: 2340 actctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaa 2399
| || || |||||||||||||||||| |||||||||||| || ||||||||| ||||||
Sbjct: 1568 attcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgcaa 1509
Query: 2400 actctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacat 2459
|||| ||||||||||| || | |||||| || | |||||||||||| ||||| |||||||
Sbjct: 1508 actcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaacat 1449
Query: 2460 aacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccag 2519
|||| | |||||| || || ||||| ||||||| |||||| || || || ||||| | |
Sbjct: 1448 aacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgctg 1389
Query: 2520 taattagaggaggttccttaagtggatccactgtactaacaaagacatcgattggagcca 2579
||| || ||||| || || | ||| ||||||||||||||||| ||||| | ||| | |
Sbjct: 1388 taacaaggggaggctctttcaatgggtccactgtactaacaaacacatcaacaggaacga 1329
Query: 2580 actgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcac 2639
||| ||||| ||||| || | ||||||||| | || || | || || ||||| || |
Sbjct: 1328 gctgtgatggttcaccgtctcgatcatatcttatagcgagacggtcaagataagtctccc 1269
Query: 2640 ggttgataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaactt 2699
||| || || ||||| || || |||||||| ||||||||||| || |||||||| | |
Sbjct: 1268 tgttaatggggtaccatttgggaaactgatcaagaagccaagaaaatgcaaaccagatct 1209
Query: 2700 cacaaataacagatacaagccacaacccataagcatcttccactggatgagttatacgat 2759
|||| ||||| || | |||||| ||| |||| || ||| || |||||| ||||||
Sbjct: 1208 cacagataaccgaggtcaaccacaaaggatatgcatttttcacagggtgagttgtacgat 1149
Query: 2760 attgaaagaagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| ||||||||||| | ||||||||||||||||| |||||| | |||||||
Sbjct: 1148 attgcaagaagaaacacaagatgataagccggagaataatcacaacccgataa 1096
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 2871 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 2812
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 2811 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 2752
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 2751 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 2692
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 2691 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 2632
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 2631 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 2572
Query: 1330 tc 1331
||
Sbjct: 2571 tc 2570
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 3213 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 3154
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 3153 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 3094
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 3093 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 3034
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 3033 tcctcaatgctcacaccgctccatctcagctcca 3000
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 3453 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 3394
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 3393 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 3334
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 3333 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 3274
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 3273 taagagacaccagccac 3257
>ref|NM_128111.2| Arabidopsis thaliana CESA10 (CELLULASE SYNTHASE 10); transferase,
transferring glycosyl groups AT2G25540 (CESA10) mRNA,
complete cds
Length = 3446
Score = 444 bits (224), Expect = e-122
Identities = 897/1122 (79%)
Strand = Plus / Minus
Query: 1691 acaggatcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaaca 1750
||||||||||| ||||||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 1901 acaggatcatacccatacaaggcctgcctgttgaaacagcagccagtgcccacatacaca 1842
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|| ||||| || ||||||| ||||||| || ||||||||||||||| | |||| |||
Sbjct: 1841 ggaccttgtataccatctaaccccttcaagttgatatcaaagaagacagtattcctgttg 1782
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|| ||||||||||||||||| |||||||| || | |||||||||||| || ||||||
Sbjct: 1781 gcgtatcgatcatgcaagtcaataccatcgaaacgttgtggaaactgcacgtagcaacac 1722
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgcta 1930
||| |||| | ||| || ||||||||||||||||| || || ||| || |||||| |
Sbjct: 1721 ttctttccgattgcagggtccatcatgaaacacatggcttccttaatcgccttgctgttg 1662
Query: 1931 ttgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgat 1990
|||||||| ||||||||||| || || | |||||| || ||||| || || ||||| ||
Sbjct: 1661 ttgaagtaatgatcacaatcaacgttcaaaagatacgccccattagtaagaacagcagaa 1602
Query: 1991 acgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttt 2050
|| |||||||| |||||||| || |||||||||||||||||||| || || || | ||||
Sbjct: 1601 acacgaatcaaggcattcatagctccagccttcttgtggtgctgaaatccaggacgcttt 1542
Query: 2051 tcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactg 2110
||||| || ||||| | |||| || | |||||| ||||| || || || || |||||
Sbjct: 1541 tcacgggacacatagatgagcctaggtagctcatttccatcggtatccagacctccacta 1482
Query: 2111 tggcccaagaatacttggatcattccnggatgatctctagggttattcccaggccangga 2170
||||| ||||| || || ||||| || ||||| ||||||||||| || |||||||| |
Sbjct: 1481 tggcctaagaaaacctgaatcatcccaggatggtctctagggttgttaccaggccaggac 1422
Query: 2171 gtgccatcagccatggtccagccctcctcaggtattttttgcgcttttgcaacaagggca 2230
|| ||||| |||| ||||| || || ||||| || || || ||||| || || ||| |
Sbjct: 1421 gtaccatcctccattgtccaaccatcttcaggaatcttctgtgctttagcgacgaggata 1362
Query: 2231 tcgatccgtactttgaactcttcatactccctcttcatagcccgcctttctttcacaaaa 2290
| ||||| ||||| ||||| |||||||| |||||||| ||||| || ||||| ||||||
Sbjct: 1361 ttgatcctcactttaaactcctcatactctctcttcattgcccgtctctctttgacaaaa 1302
Query: 2291 gaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaaactctggagcc 2350
|||||||| || |||||||| | |||||||||||| | | ||| || ||||| |||||
Sbjct: 1301 gaaggttggatcttgtccttcaagtaatctatcttctgggaaaaatagaactcaggagct 1242
Query: 2351 ctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaactctgcggtt 2410
||||||||||||||| |||||||||||| || ||||||||| ||| ||||| || |||
Sbjct: 1241 ctaggttcaatgttgaatttcttgcaaaaaggtacccatttctttgagaactcagccgtt 1182
Query: 2411 tcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatact 2470
||||| || ||||||||||| | |||||||||||||||||| ||||| ||||| | |||
Sbjct: 1181 tcagaaagggcttcaaaagttagcatagctgaaccgtcatccgaaacgtaacacgcaact 1122
Query: 2471 ttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccagtaattagagga 2530
|| || || ||||| ||||||||||| || || || || ||||| | || | ||||||
Sbjct: 1121 ttatccactgggtagtccacagcaaggattgagagaactgtgtttgctgttacaagagga 1062
Query: 2531 ggttccttaagtggatccactgtactaacaaagacatcgattggagccaactgggatggc 2590
|| || || | || ||||| ||||||||||| ||||| | ||||| | ||| |||||
Sbjct: 1061 ggctctttcatcgggtccaccgtactaacaaacacatccacgggagctagctgtgatggt 1002
Query: 2591 tcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcacggttgatagga 2650
||||| || | ||| ||||| || ||||| || || || |||| || | ||| || |||
Sbjct: 1001 tcaccatctcgatcgtatcttaaagcaagcctgtcaagaaaagtctccctgttaatggga 942
Query: 2651 taccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataaca 2710
||||| |||||||||||||| ||||||||||| || |||||||| | |||||||||||
Sbjct: 941 taccattttgggaactgatcaagaagccaagaaaaggcaaaccagatctcacaaataact 882
Query: 2711 gatacaagccacaacccataagcatcttccactggatgagttatacgatattgaaagaag 2770
|| | ||||| |||| ||||||| ||| ||||||||| ||||||| || ||||||
Sbjct: 881 gaggtcaaccacagggcatatgcatctttcacgggatgagttgtacgataatgcaagaag 822
Query: 2771 aaacataggatgataagccggagaacaatcacgatccgataa 2812
| | | ||||| ||||||||||| ||||| || ||||||
Sbjct: 821 actcccaaaatgatgagccggagaactatcactatacgataa 780
Score = 95.6 bits (48), Expect = 4e-017
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| ||||| ||||| || || ||||| ||||| || ||||| ||||| | ||
Sbjct: 2897 agaagagacgtccatttgaagacgtaaagctctgcaaagtctccatcttcatctgaggct 2838
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||||||||| |||||||||||||| |||||||| | ||||| | |||||||| |||
Sbjct: 2837 tttgatgtgactgtgaagtttgtgtctatccctgcaaaaactttgagtagaccttgaaac 2778
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| || || || ||||| || |||||||||||||| || ||||||||
Sbjct: 2777 actgcaaaaagatgagccgatgttccaccgattacccaaaactgctcgttcctccaccag 2718
Query: 868 tcctcaatgccaacaccactccat 891
|| |||| | | ||| ||||||||
Sbjct: 2717 tcttcaagggccacatcactccat 2694
Score = 93.7 bits (47), Expect = 2e-016
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 1234 cagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagta 1293
|||||||| ||||||||||| ||||||||||||||||| ||||| | ||||||||| ||
Sbjct: 2351 cagtagattgatatccaaccccttgcatgcatcttgaatccagtaagaatatcttctgtc 2292
Query: 1294 acagagccatatatccatccgatctctttccccca 1328
||||| || || ||||| ||||||||||| |||||
Sbjct: 2291 acagaaccgtagatccacccgatctctttgcccca 2257
Score = 60.0 bits (30), Expect = 2e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||||||||| || ||||| |||||||| || | |||||||| ||| ||
Sbjct: 2555 gggatggatgtaattggatagactatggtattgatgtaggcaattctctccaaaagtttc 2496
Query: 1090 agccttccattgtaaccataccagataggacagtgtct 1127
| ||| ||||| || |||||||| ||||| || |||||
Sbjct: 2495 aacctcccattatagccataccatatagggcaatgtct 2458
>dbj|BD022679.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3673
Score = 442 bits (223), Expect = e-121
Identities = 905/1133 (79%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 2021 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 1962
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || || || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 1961 ccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaaaagacta 1902
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 1901 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 1842
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 1841 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 1782
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 1781 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 1722
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||| | ||||| || ||||| |||||||| || |||||||| |||||||| || || |
Sbjct: 1721 gaacaacagatacacggatcaatgcattcatagctccagcctttttgtggtgttgaaatc 1662
Query: 2040 ctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaa 2099
| |||| |||||||||||||||||| | || | |||| |||||| ||||| || || |
Sbjct: 1661 caggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcggtatcca 1602
Query: 2100 gcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattcc 2159
| || ||||| ||||| ||||| || || |||||||| ||||||||||||| ||| || |
Sbjct: 1601 gacccccactatggcctaagaacacctgtatcattccaggatgatctctagtgttgttac 1542
Query: 2160 caggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttg 2219
||||||| ||||| ||||| ||| |||||||| || ||||| ||||| || ||||| |
Sbjct: 1541 caggccagggagtaccatcctgcattgtccagccttcttcagggattttctgtgctttgg 1482
Query: 2220 caacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccgccttt 2279
||||||| |||| |||| ||||| |||||||||||||| ||||||||||| || | |
Sbjct: 1481 caacaagagcatttatcctcactttaaactcttcatactctctcttcatagctcgtcgct 1422
Query: 2280 ctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaa 2339
|||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| || |
Sbjct: 1421 ctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaataga 1362
Query: 2340 actctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaa 2399
| || || |||||||||||||||||| |||||||||||| || ||||||||| ||||||
Sbjct: 1361 attcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgcaa 1302
Query: 2400 actctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacat 2459
|||| ||||||||||| || | |||||| || | |||||||||||| ||||| |||||||
Sbjct: 1301 actcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaacat 1242
Query: 2460 aacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccag 2519
|||| | |||||| || || ||||| ||||||| |||||| || || || ||||| | |
Sbjct: 1241 aacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgctg 1182
Query: 2520 taattagaggaggttccttaagtggatccactgtactaacaaagacatcgattggagcca 2579
||| || ||||| || || | ||| ||||||||||||||||| ||||| | ||| | |
Sbjct: 1181 taacaaggggaggctctttcaatgggtccactgtactaacaaacacatcaacaggaacga 1122
Query: 2580 actgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcac 2639
||| ||||| ||||| || | ||||||||| | || || | || || ||||| || |
Sbjct: 1121 gctgtgatggttcaccgtctcgatcatatcttatagcgagacggtcaagataagtctccc 1062
Query: 2640 ggttgataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaactt 2699
||| || || ||||| || || |||||||| ||||||||||| || |||||||| | |
Sbjct: 1061 tgttaatggggtaccatttgggaaactgatcaagaagccaagaaaatgcaaaccagatct 1002
Query: 2700 cacaaataacagatacaagccacaacccataagcatcttccactggatgagttatacgat 2759
|||| ||||| || | |||||| ||| |||| || ||| || |||||| ||||||
Sbjct: 1001 cacagataaccgaggtcaaccacaaaggatatgcatttttcacagggtgagttgtacgat 942
Query: 2760 attgaaagaagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| ||||||||||| | ||||||||||||||||| |||||| | |||||||
Sbjct: 941 attgcaagaagaaacacaagatgataagccggagaataatcacaacccgataa 889
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 2664 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 2605
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 2604 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 2545
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 2544 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 2485
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 2484 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 2425
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 2424 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 2365
Query: 1330 tc 1331
||
Sbjct: 2364 tc 2363
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 3006 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 2947
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 2946 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 2887
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 2886 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 2827
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 2826 tcctcaatgctcacaccgctccatctcagctcca 2793
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 3246 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 3187
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 3186 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 3127
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 3126 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 3067
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 3066 taagagacaccagccac 3050
>emb|AX030948.1| Sequence 11 from Patent WO9800549
Length = 3673
Score = 442 bits (223), Expect = e-121
Identities = 905/1133 (79%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 2021 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 1962
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || || || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 1961 ccacatatactggaccctggataccatccaaccccttcatgttaatatcgaaaaagacta 1902
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 1901 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 1842
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 1841 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 1782
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 1781 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 1722
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||| | ||||| || ||||| |||||||| || |||||||| |||||||| || || |
Sbjct: 1721 gaacaacagatacacggatcaatgcattcatagctccagcctttttgtggtgttgaaatc 1662
Query: 2040 ctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaa 2099
| |||| |||||||||||||||||| | || | |||| |||||| ||||| || || |
Sbjct: 1661 caggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcggtatcca 1602
Query: 2100 gcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattcc 2159
| || ||||| ||||| ||||| || || |||||||| ||||||||||||| ||| || |
Sbjct: 1601 gacccccactatggcctaagaacacctgtatcattccaggatgatctctagtgttgttac 1542
Query: 2160 caggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttg 2219
||||||| ||||| ||||| ||| |||||||| || ||||| ||||| || ||||| |
Sbjct: 1541 caggccagggagtaccatcctgcattgtccagccttcttcagggattttctgtgctttgg 1482
Query: 2220 caacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccgccttt 2279
||||||| |||| |||| ||||| |||||||||||||| ||||||||||| || | |
Sbjct: 1481 caacaagagcatttatcctcactttaaactcttcatactctctcttcatagctcgtcgct 1422
Query: 2280 ctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaa 2339
|||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| || |
Sbjct: 1421 ctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaataga 1362
Query: 2340 actctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaa 2399
| || || |||||||||||||||||| |||||||||||| || ||||||||| ||||||
Sbjct: 1361 attcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgcaa 1302
Query: 2400 actctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacat 2459
|||| ||||||||||| || | |||||| || | |||||||||||| ||||| |||||||
Sbjct: 1301 actcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaacat 1242
Query: 2460 aacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccag 2519
|||| | |||||| || || ||||| ||||||| |||||| || || || ||||| | |
Sbjct: 1241 aacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgctg 1182
Query: 2520 taattagaggaggttccttaagtggatccactgtactaacaaagacatcgattggagcca 2579
||| || ||||| || || | ||| ||||||||||||||||| ||||| | ||| | |
Sbjct: 1181 taacaaggggaggctctttcaatgggtccactgtactaacaaacacatcaacaggaacga 1122
Query: 2580 actgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcac 2639
||| ||||| ||||| || | ||||||||| | || || | || || ||||| || |
Sbjct: 1121 gctgtgatggttcaccgtctcgatcatatcttatagcgagacggtcaagataagtctccc 1062
Query: 2640 ggttgataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaactt 2699
||| || || ||||| || || |||||||| ||||||||||| || |||||||| | |
Sbjct: 1061 tgttaatggggtaccatttgggaaactgatcaagaagccaagaaaatgcaaaccagatct 1002
Query: 2700 cacaaataacagatacaagccacaacccataagcatcttccactggatgagttatacgat 2759
|||| ||||| || | |||||| ||| |||| || ||| || |||||| ||||||
Sbjct: 1001 cacagataaccgaggtcaaccacaaaggatatgcatttttcacagggtgagttgtacgat 942
Query: 2760 attgaaagaagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| ||||||||||| | ||||||||||||||||| |||||| | |||||||
Sbjct: 941 attgcaagaagaaacacaagatgataagccggagaataatcacaacccgataa 889
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 2664 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 2605
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 2604 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 2545
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 2544 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 2485
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 2484 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 2425
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 2424 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 2365
Query: 1330 tc 1331
||
Sbjct: 2364 tc 2363
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 3006 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 2947
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 2946 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 2887
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 2886 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 2827
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 2826 tcctcaatgctcacaccgctccatctcagctcca 2793
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 3246 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 3187
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 3186 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 3127
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 3126 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 3067
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 3066 taagagacaccagccac 3050
>gb|CK120272.1|CK120272 207o02.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O02207
5-PRIME, mRNA sequence
Length = 780
Score = 289 bits (146), Expect = 1e-075
Identities = 549/684 (80%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||||||||||| ||| || |||||||| ||||| ||||| ||| |||
Sbjct: 713 atcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtc 654
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
||||| || ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||
Sbjct: 653 cagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaac 594
Query: 2249 tcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattttgtcc 2308
||||||||||| ||||||||||| || | ||||| |||||||| ||||| || ||||||
Sbjct: 593 tcttcatactctctcttcatagctcgtcgctctttaacaaaagacggttggatcttgtcc 534
Query: 2309 tttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgt 2368
|| | |||||||||||| | ||||| || || || || |||||||||||||||||| |
Sbjct: 533 ttcaagtaatctatcttctgggcaaaatagaattcaggggccctaggttcaatgttgaat 474
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| || ||||||||| |||||||||| ||||||||||| || | ||||||
Sbjct: 473 ttcttgcaaaatggtacccatttctttgcaaactcagcggtttcagaaagggattcaaag 414
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||||||||| ||||| ||||||||||| | |||||| || || ||||| |||
Sbjct: 413 gtaagcatagctgaaccatcatctgaaacataacaggctactttatctaccgggtagtcc 354
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|||| |||||| || || || ||||| | |||| || ||||| || || | ||| |||
Sbjct: 353 acagaaagaatcgagagaactgtgtttgctgtaacaaggggaggctctttcaatgggtcc 294
Query: 2549 actgtactaacaaagacatcgattggagccaactgggatggctcaccctccctatcatat 2608
|||||||||||||| ||||| | ||| | | ||| ||||| ||||| || | |||||||
Sbjct: 293 actgtactaacaaacacatcaacaggaacgagctgtgatggttcaccgtctcgatcatat 234
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
|| | || || | || || ||||| || | ||| || || ||||| || || ||||||
Sbjct: 233 cttatagcgagacggtcaagataagtctccctgttaatggggtaccatttgggaaactga 174
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
|| ||||||||||| || |||||||| | ||||| ||||| || | |||||| |
Sbjct: 173 tcaagaagccaagaaaatgcaaaccagatctcacagataaccgaggtcaaccacaaagga 114
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacataggatgataagc 2788
|| |||| || ||| || |||||| |||||||||| ||||||||||| | ||||||||||
Sbjct: 113 tatgcatttttcacagggtgagttgtacgatattgcaagaagaaacacaagatgataagc 54
Query: 2789 cggagaacaatcacgatccgataa 2812
||||||| |||||| | |||||||
Sbjct: 53 cggagaataatcacaacccgataa 30
>dbj|BD022673.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 2248
Score = 250 bits (126), Expect = 1e-063
Identities = 475/592 (80%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 595 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 536
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || || || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 535 ccacatatactggaccgtggataccatccaaccccttcatgttaatatcgaaaaagacta 476
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 475 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 416
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 415 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 356
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 355 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 296
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||||| ||||| || ||| | |||||||| || |||||||| |||||||| || || |
Sbjct: 295 gaacagcagatacacggatcgatgcattcatagctccagcctttttgtggtgttgaaatc 236
Query: 2040 ctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaa 2099
| |||| |||||||||||||||||| | || | |||| |||||| ||||| || || |
Sbjct: 235 caggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcggtatcca 176
Query: 2100 gcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattcc 2159
| || ||||| ||||| ||||| || || |||||||| ||||||||||||| ||| || |
Sbjct: 175 gacccccactatggcctaagaacacctgtatcattccaggatgatctctagtgttgttac 116
Query: 2160 caggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttg 2219
||||||| ||||| ||||| ||| |||||||| || |||| ||||| || ||||| |
Sbjct: 115 caggccagggagtaccatcctgcattgtccagccttctccagggattttctgtgctttgg 56
Query: 2220 caacaagggcatcgatccgtactttgaactcttcatactccctcttcatagc 2271
||||||| |||| |||| ||||| |||||||||||||| |||||||||||
Sbjct: 55 caacaagagcatttatcctcactttaaactcttcatactctctcttcatagc 4
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 1238 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 1179
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 1178 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 1119
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 1118 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 1059
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 1058 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 999
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 998 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 939
Query: 1330 tc 1331
||
Sbjct: 938 tc 937
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 1820 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 1761
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 1760 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 1701
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 1700 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 1641
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 1640 taagagacaccagccac 1624
Score = 75.8 bits (38), Expect = 4e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 796 agaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctca 855
||||||||||| |||||||| ||||| | || ||||||||||||||||| ||||| |
Sbjct: 1472 agaccttggaagacagcaaaaagatgggtggatgtgccaccaatgacccagaactggttg 1413
Query: 856 tttctccaccaatcctcaatgc 877
|| |||||||||||||||||||
Sbjct: 1412 ttcctccaccaatcctcaatgc 1391
>emb|AX030938.1| Sequence 1 from Patent WO9800549
Length = 2248
Score = 250 bits (126), Expect = 1e-063
Identities = 475/592 (80%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 595 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 536
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || || || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 535 ccacatatactggaccgtggataccatccaaccccttcatgttaatatcgaaaaagacta 476
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 475 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 416
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 415 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 356
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 355 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 296
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||||| ||||| || ||| | |||||||| || |||||||| |||||||| || || |
Sbjct: 295 gaacagcagatacacggatcgatgcattcatagctccagcctttttgtggtgttgaaatc 236
Query: 2040 ctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaa 2099
| |||| |||||||||||||||||| | || | |||| |||||| ||||| || || |
Sbjct: 235 caggccgcttttcacgagaaacatagatgagtctaggcagctcatttccatcggtatcca 176
Query: 2100 gcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattcc 2159
| || ||||| ||||| ||||| || || |||||||| ||||||||||||| ||| || |
Sbjct: 175 gacccccactatggcctaagaacacctgtatcattccaggatgatctctagtgttgttac 116
Query: 2160 caggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttg 2219
||||||| ||||| ||||| ||| |||||||| || |||| ||||| || ||||| |
Sbjct: 115 caggccagggagtaccatcctgcattgtccagccttctccagggattttctgtgctttgg 56
Query: 2220 caacaagggcatcgatccgtactttgaactcttcatactccctcttcatagc 2271
||||||| |||| |||| ||||| |||||||||||||| |||||||||||
Sbjct: 55 caacaagagcatttatcctcactttaaactcttcatactctctcttcatagc 4
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 1238 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 1179
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 1178 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 1119
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 1118 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 1059
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 1058 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 999
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 998 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 939
Query: 1330 tc 1331
||
Sbjct: 938 tc 937
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 1820 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 1761
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 1760 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 1701
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 1700 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 1641
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 1640 taagagacaccagccac 1624
Score = 75.8 bits (38), Expect = 4e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 796 agaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctca 855
||||||||||| |||||||| ||||| | || ||||||||||||||||| ||||| |
Sbjct: 1472 agaccttggaagacagcaaaaagatgggtggatgtgccaccaatgacccagaactggttg 1413
Query: 856 tttctccaccaatcctcaatgc 877
|| |||||||||||||||||||
Sbjct: 1412 ttcctccaccaatcctcaatgc 1391
>gb|AV547629.1|AV547629 AV547629 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL36c07F 3', mRNA sequence
Length = 605
Score = 234 bits (118), Expect = 7e-059
Identities = 472/590 (80%)
Strand = Plus / Plus
Query: 2213 gcttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcc 2272
||||| |||||||| |||| |||| ||||| |||||||||||||| |||||||||||
Sbjct: 16 gctttggcaacaagagcatttatcctcactttaaactcttcatactctctcttcatagct 75
Query: 2273 cgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagca 2332
|| | ||||| |||||||| ||||| || |||||||| | |||||||||||| | |||
Sbjct: 76 cgtcgctctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggca 135
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
|| || || || || |||||||||||||||||| |||||||||||| || |||||||||
Sbjct: 136 aaatagaattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttc 195
Query: 2393 cttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatca 2452
|||||||||| ||||||||||| || | |||||| || | |||||||||||| |||||
Sbjct: 196 tttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatct 255
Query: 2453 gaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtg 2512
||||||||||| | |||||| || || ||||| ||||||| |||||| || || || |||
Sbjct: 256 gaaacataacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtg 315
Query: 2513 ttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgatt 2572
|| | |||| || ||||| || || | ||| ||||||||||||||||| ||||| |
Sbjct: 316 tttgctgtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatcaaca 375
Query: 2573 ggagccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaa 2632
||| | | ||| ||||| ||||| || | ||||||||| | || || | || || |||
Sbjct: 376 ggaacgagctgtgatggttcaccgtctcgatcatatcttatagcgagacggtcaagataa 435
Query: 2633 gtttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaac 2692
|| || | ||| || || ||||| || || |||||||| ||||||||||| || ||||||
Sbjct: 436 gtctccctgttaatggggtaccatttgggaaactgatcaagaagccaagaaaatgcaaac 495
Query: 2693 caaacttcacaaataacagatacaagccacaacccataagcatcttccactggatgagtt 2752
|| | ||||| ||||| || | |||||| ||| |||| || ||| || ||||||
Sbjct: 496 cagatctcacagataaccgaggtcaaccacaaaggatatgcatttttcacagggtgagtt 555
Query: 2753 atacgatattgaaagaagaaacataggatgataagccggagaacaatcac 2802
|||||||||| ||||||||||| | ||||||||||||||||| ||||||
Sbjct: 556 gtacgatattgcaagaagaaacacaagatgataagccggagaataatcac 605
>gb|AV530113.1|AV530113 AV530113 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL59b03R 5', mRNA
sequence
Length = 507
Score = 220 bits (111), Expect = 1e-054
Identities = 315/383 (82%)
Strand = Plus / Minus
Query: 2186 gtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttg 2245
|||||||| || ||||| ||||| || ||||| |||||||| |||| |||| |||||
Sbjct: 503 gtccagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcacttta 444
Query: 2246 aactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattttg 2305
|||||||||||||| ||||||||||| || | ||||| |||||||| ||||| || |||
Sbjct: 443 aactcttcatactctctcttcatagctcgtcgctctttaacaaaagacggttggatcttg 384
Query: 2306 tcctttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgttg 2365
||||| | |||||||||||| | ||||| || || || || ||||||||||||||||||
Sbjct: 383 tccttcaagtaatctatcttctgggcaaaatagaattcaggggccctaggttcaatgttg 324
Query: 2366 tgtttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttca 2425
|||||||||||| || ||||||||| |||||||||| ||||||||||| || | ||||
Sbjct: 323 aatttcttgcaaaatggtacccatttctttgcaaactcagcggtttcagaaagggattca 264
Query: 2426 aaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaa 2485
|| || | |||||||||||| ||||| ||||||||||| | |||||| || || |||||
Sbjct: 263 aaggtaagcatagctgaaccatcatctgaaacataacaggctactttatctaccgggtag 204
Query: 2486 tccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtgga 2545
||||||| |||||| || || || ||||| | |||| || ||||| || || | |||
Sbjct: 203 tccacagaaagaatcgagagaactgtgtttgctgtaacaaggggaggctctttcaatggg 144
Query: 2546 tccactgtactaacaaagacatc 2568
||||||||||||||||| |||||
Sbjct: 143 tccactgtactaacaaacacatc 121
>gb|AV528526.1|AV528526 AV528526 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL11d04R 5', mRNA
sequence
Length = 414
Score = 170 bits (86), Expect = 9e-040
Identities = 239/290 (82%)
Strand = Plus / Minus
Query: 2279 tctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaa 2338
||||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| ||
Sbjct: 403 tctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaatag 344
Query: 2339 aactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgca 2398
|| || || |||||||||||||||||| |||||||||||| || ||||||||| |||||
Sbjct: 343 aattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgca 284
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| ||||||||||| || | |||||| || | |||||||||||| ||||| ||||||
Sbjct: 283 aactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaaca 224
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgcca 2518
||||| | |||||| || || ||||| ||||||| |||||| || || || ||||| |
Sbjct: 223 taacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgct 164
Query: 2519 gtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||| || ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 163 gtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatc 114
>gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synthase catalytic subunit (RSW1)
gene, complete cds
Length = 8401
Score = 170 bits (86), Expect = 9e-040
Identities = 239/290 (82%)
Strand = Plus / Minus
Query: 2279 tctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaa 2338
||||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| ||
Sbjct: 5102 tctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaatag 5043
Query: 2339 aactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgca 2398
|| || || |||||||||||||||||| |||||||||||| || ||||||||| |||||
Sbjct: 5042 aattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgca 4983
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| ||||||||||| || | |||||| || | |||||||||||| ||||| ||||||
Sbjct: 4982 aactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaaca 4923
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgcca 2518
||||| | |||||| || || ||||| ||||||| |||||| || || || ||||| |
Sbjct: 4922 taacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgct 4863
Query: 2519 gtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||| || ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 4862 gtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatc 4813
Score = 129 bits (65), Expect = 3e-027
Identities = 227/281 (80%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 6931 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 6872
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 6871 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 6812
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 6811 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 6752
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 6751 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 6692
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|| ||||| | ||||||||| || || || ||||| |||||
Sbjct: 6691 aacccagtaagaatatcttccgtcacggaaccatagatcca 6651
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 7355 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 7296
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 7295 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 7236
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 7235 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 7176
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 7175 tcctcaatgctcacaccgctccatctcagctcca 7142
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 7595 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 7536
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 7535 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 7476
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 7475 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 7416
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 7415 taagagacaccagccac 7399
Score = 91.7 bits (46), Expect = 6e-016
Identities = 113/136 (83%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||||||||||| ||| || |||||||| ||||| ||||| ||| |||
Sbjct: 5330 atcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtc 5271
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
||||| || ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||
Sbjct: 5270 cagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaac 5211
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 5210 tcttcatactctctct 5195
Score = 79.8 bits (40), Expect = 2e-012
Identities = 160/200 (80%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||| || |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| ||
Sbjct: 5898 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 5839
Query: 1853 aactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctct 1912
||||| |||||||| ||| |||| | || || |||||||||||||||||||| |||
Sbjct: 5838 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 5779
Query: 1913 ctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcacca 1972
||| ||| || ||| |||| ||||| |||||||||||||| || | |||||| || |||
Sbjct: 5778 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 5719
Query: 1973 ttcgtcaggacagctgatac 1992
|| || || ||||| |||||
Sbjct: 5718 ttggtaagaacagcagatac 5699
Score = 75.8 bits (38), Expect = 4e-011
Identities = 122/150 (81%)
Strand = Plus / Minus
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccac 2722
|||||||| ||||||||||| || |||||||| | ||||| ||||| || | ||||
Sbjct: 4383 aactgatcaagaagccaagaaaatgcaaaccagatctcacagataaccgaggtcaaccac 4324
Query: 2723 aacccataagcatcttccactggatgagttatacgatattgaaagaagaaacataggatg 2782
|| ||| |||| || ||| || |||||| |||||||||| ||||||||||| | ||||
Sbjct: 4323 aaaggatatgcatttttcacagggtgagttgtacgatattgcaagaagaaacacaagatg 4264
Query: 2783 ataagccggagaacaatcacgatccgataa 2812
||||||||||||| |||||| | |||||||
Sbjct: 4263 ataagccggagaataatcacaacccgataa 4234
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| || |||||||| |||||||| || || || |||| ||||||||||||||||
Sbjct: 5537 gcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttcacgagaaaca 5478
Query: 2063 ta 2064
||
Sbjct: 5477 ta 5476
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 6117 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 6058
Query: 1740 ccacata 1746
|||||||
Sbjct: 6057 ccacata 6051
>dbj|BD022674.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 8411
Score = 170 bits (86), Expect = 9e-040
Identities = 239/290 (82%)
Strand = Plus / Minus
Query: 2279 tctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaa 2338
||||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| ||
Sbjct: 5112 tctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaatag 5053
Query: 2339 aactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgca 2398
|| || || |||||||||||||||||| |||||||||||| || ||||||||| |||||
Sbjct: 5052 aattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgca 4993
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| ||||||||||| || | |||||| || | |||||||||||| ||||| ||||||
Sbjct: 4992 aactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaaca 4933
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgcca 2518
||||| | |||||| || || ||||| ||||||| |||||| || || || ||||| |
Sbjct: 4932 taacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgct 4873
Query: 2519 gtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||| || ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 4872 gtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatc 4823
Score = 129 bits (65), Expect = 3e-027
Identities = 227/281 (80%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 6941 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 6882
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 6881 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 6822
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 6821 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 6762
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 6761 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 6702
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|| ||||| | ||||||||| || || || ||||| |||||
Sbjct: 6701 aacccagtaagaatatcttccgtcacggaaccatagatcca 6661
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 7365 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 7306
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 7305 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 7246
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 7245 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 7186
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 7185 tcctcaatgctcacaccgctccatctcagctcca 7152
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 7605 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 7546
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 7545 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 7486
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 7485 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 7426
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 7425 taagagacaccagccac 7409
Score = 91.7 bits (46), Expect = 6e-016
Identities = 113/136 (83%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||||||||||| ||| || |||||||| ||||| ||||| ||| |||
Sbjct: 5340 atcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtc 5281
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
||||| || ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||
Sbjct: 5280 cagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaac 5221
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 5220 tcttcatactctctct 5205
Score = 79.8 bits (40), Expect = 2e-012
Identities = 160/200 (80%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||| || |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| ||
Sbjct: 5908 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 5849
Query: 1853 aactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctct 1912
||||| |||||||| ||| |||| | || || |||||||||||||||||||| |||
Sbjct: 5848 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 5789
Query: 1913 ctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcacca 1972
||| ||| || ||| |||| ||||| |||||||||||||| || | |||||| || |||
Sbjct: 5788 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 5729
Query: 1973 ttcgtcaggacagctgatac 1992
|| || || ||||| |||||
Sbjct: 5728 ttggtaagaacagcagatac 5709
Score = 75.8 bits (38), Expect = 4e-011
Identities = 122/150 (81%)
Strand = Plus / Minus
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccac 2722
|||||||| ||||||||||| || |||||||| | ||||| ||||| || | ||||
Sbjct: 4393 aactgatcaagaagccaagaaaatgcaaaccagatctcacagataaccgaggtcaaccac 4334
Query: 2723 aacccataagcatcttccactggatgagttatacgatattgaaagaagaaacataggatg 2782
|| ||| |||| || ||| || |||||| |||||||||| ||||||||||| | ||||
Sbjct: 4333 aaaggatatgcatttttcacagggtgagttgtacgatattgcaagaagaaacacaagatg 4274
Query: 2783 ataagccggagaacaatcacgatccgataa 2812
||||||||||||| |||||| | |||||||
Sbjct: 4273 ataagccggagaataatcacaacccgataa 4244
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| || |||||||| |||||||| || || || |||| ||||||||||||||||
Sbjct: 5547 gcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttcacgagaaaca 5488
Query: 2063 ta 2064
||
Sbjct: 5487 ta 5486
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 6127 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 6068
Query: 1740 ccacata 1746
|||||||
Sbjct: 6067 ccacata 6061
>emb|AX030940.1| Sequence 3 from Patent WO9800549
Length = 8411
Score = 170 bits (86), Expect = 9e-040
Identities = 239/290 (82%)
Strand = Plus / Minus
Query: 2279 tctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaa 2338
||||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| ||
Sbjct: 5112 tctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaatag 5053
Query: 2339 aactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgca 2398
|| || || |||||||||||||||||| |||||||||||| || ||||||||| |||||
Sbjct: 5052 aattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgca 4993
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| ||||||||||| || | |||||| || | |||||||||||| ||||| ||||||
Sbjct: 4992 aactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaaca 4933
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgcca 2518
||||| | |||||| || || ||||| ||||||| |||||| || || || ||||| |
Sbjct: 4932 taacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgct 4873
Query: 2519 gtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||| || ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 4872 gtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatc 4823
Score = 129 bits (65), Expect = 3e-027
Identities = 227/281 (80%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 6941 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 6882
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 6881 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 6822
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 6821 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 6762
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 6761 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 6702
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|| ||||| | ||||||||| || || || ||||| |||||
Sbjct: 6701 aacccagtaagaatatcttccgtcacggaaccatagatcca 6661
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 7365 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 7306
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 7305 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 7246
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 7245 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 7186
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 7185 tcctcaatgctcacaccgctccatctcagctcca 7152
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 7605 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 7546
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 7545 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 7486
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 7485 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 7426
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 7425 taagagacaccagccac 7409
Score = 91.7 bits (46), Expect = 6e-016
Identities = 113/136 (83%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||||||||||| ||| || |||||||| ||||| ||||| ||| |||
Sbjct: 5340 atcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtc 5281
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
||||| || ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||
Sbjct: 5280 cagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaac 5221
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 5220 tcttcatactctctct 5205
Score = 79.8 bits (40), Expect = 2e-012
Identities = 160/200 (80%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||| || |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| ||
Sbjct: 5908 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 5849
Query: 1853 aactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctct 1912
||||| |||||||| ||| |||| | || || |||||||||||||||||||| |||
Sbjct: 5848 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 5789
Query: 1913 ctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcacca 1972
||| ||| || ||| |||| ||||| |||||||||||||| || | |||||| || |||
Sbjct: 5788 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 5729
Query: 1973 ttcgtcaggacagctgatac 1992
|| || || ||||| |||||
Sbjct: 5728 ttggtaagaacagcagatac 5709
Score = 75.8 bits (38), Expect = 4e-011
Identities = 122/150 (81%)
Strand = Plus / Minus
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccac 2722
|||||||| ||||||||||| || |||||||| | ||||| ||||| || | ||||
Sbjct: 4393 aactgatcaagaagccaagaaaatgcaaaccagatctcacagataaccgaggtcaaccac 4334
Query: 2723 aacccataagcatcttccactggatgagttatacgatattgaaagaagaaacataggatg 2782
|| ||| |||| || ||| || |||||| |||||||||| ||||||||||| | ||||
Sbjct: 4333 aaaggatatgcatttttcacagggtgagttgtacgatattgcaagaagaaacacaagatg 4274
Query: 2783 ataagccggagaacaatcacgatccgataa 2812
||||||||||||| |||||| | |||||||
Sbjct: 4273 ataagccggagaataatcacaacccgataa 4244
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| || |||||||| |||||||| || || || |||| ||||||||||||||||
Sbjct: 5547 gcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttcacgagaaaca 5488
Query: 2063 ta 2064
||
Sbjct: 5487 ta 5486
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 6127 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 6068
Query: 1740 ccacata 1746
|||||||
Sbjct: 6067 ccacata 6061
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 170 bits (86), Expect = 9e-040
Identities = 239/290 (82%)
Strand = Plus / Plus
Query: 2279 tctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaa 2338
||||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| ||
Sbjct: 11556353 tctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaatag 11556412
Query: 2339 aactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgca 2398
|| || || |||||||||||||||||| |||||||||||| || ||||||||| |||||
Sbjct: 11556413 aattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgca 11556472
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| ||||||||||| || | |||||| || | |||||||||||| ||||| ||||||
Sbjct: 11556473 aactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaaca 11556532
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgcca 2518
||||| | |||||| || || ||||| ||||||| |||||| || || || ||||| |
Sbjct: 11556533 taacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgct 11556592
Query: 2519 gtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||| || ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 11556593 gtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatc 11556642
Score = 129 bits (65), Expect = 3e-027
Identities = 227/281 (80%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 11554524 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 11554583
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 11554584 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 11554643
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 11554644 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 11554703
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 11554704 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 11554763
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|| ||||| | ||||||||| || || || ||||| |||||
Sbjct: 11554764 aacccagtaagaatatcttccgtcacggaaccatagatcca 11554804
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 11554100 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 11554159
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 11554160 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 11554219
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 11554220 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 11554279
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 11554280 tcctcaatgctcacaccgctccatctcagctcca 11554313
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 11553860 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 11553919
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 11553920 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 11553979
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 11553980 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 11554039
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 11554040 taagagacaccagccac 11554056
Score = 93.7 bits (47), Expect = 2e-016
Identities = 151/183 (82%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||| |||| ||| ||||||| |||| |||||| || || |||||||||||
Sbjct: 14212941 atcaaagaacacaacgttacggtttgagtatctatcatgtctatcaatcccatcaaatct 14212882
Query: 1846 ttgtggaaactgaacatagcaagttttccttcct-agtgctggatccatcatgaaacaca 1904
|| |||||||||||||| ||| |||| |||| | ||| || ||||||||||||||||
Sbjct: 14212881 ctgcggaaactgaacataacaaactttctttcccgattgcggg-tccatcatgaaacaca 14212823
Query: 1905 tagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagat 1964
||| ||||||| ||||||||| | |||| ||||||||||||||| ||||||||||| |
Sbjct: 14212822 tagattctctaattgctttgctgttgttgatgtagtgatcacaatcgacattaagaaggt 14212763
Query: 1965 aag 1967
|||
Sbjct: 14212762 aag 14212760
Score = 91.7 bits (46), Expect = 6e-016
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||||||||||| ||| || |||||||| ||||| ||||| ||| |||
Sbjct: 11556125 atcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtc 11556184
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
||||| || ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||
Sbjct: 11556185 cagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaac 11556244
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 11556245 tcttcatactctctct 11556260
Score = 79.8 bits (40), Expect = 2e-012
Identities = 160/200 (80%)
Strand = Plus / Plus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||| || |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| ||
Sbjct: 11555557 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 11555616
Query: 1853 aactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctct 1912
||||| |||||||| ||| |||| | || || |||||||||||||||||||| |||
Sbjct: 11555617 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 11555676
Query: 1913 ctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcacca 1972
||| ||| || ||| |||| ||||| |||||||||||||| || | |||||| || |||
Sbjct: 11555677 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 11555736
Query: 1973 ttcgtcaggacagctgatac 1992
|| || || ||||| |||||
Sbjct: 11555737 ttggtaagaacagcagatac 11555756
Score = 75.8 bits (38), Expect = 4e-011
Identities = 122/150 (81%)
Strand = Plus / Plus
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccac 2722
|||||||| ||||||||||| || |||||||| | ||||| ||||| || | ||||
Sbjct: 11557072 aactgatcaagaagccaagaaaatgcaaaccagatctcacagataaccgaggtcaaccac 11557131
Query: 2723 aacccataagcatcttccactggatgagttatacgatattgaaagaagaaacataggatg 2782
|| ||| |||| || ||| || |||||| |||||||||| ||||||||||| | ||||
Sbjct: 11557132 aaaggatatgcatttttcacagggtgagttgtacgatattgcaagaagaaacacaagatg 11557191
Query: 2783 ataagccggagaacaatcacgatccgataa 2812
||||||||||||| |||||| | |||||||
Sbjct: 11557192 ataagccggagaataatcacaacccgataa 11557221
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 14211685 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 14211626
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 14211625 caagacactgcaaacca 14211609
Score = 63.9 bits (32), Expect = 1e-007
Identities = 158/200 (79%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 14212021 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 14211962
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||||| ||| || || || |||||||| | || || || ||||| |||||
Sbjct: 14211961 gtaagcatagctgcaccatcgtctgatacataacacgcaaccttatccacaggataatca 14211902
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| || |||||||| || || ||||| | ||||| | || || || || | ||||||
Sbjct: 14211901 actgctagaatggaaagaactgtgtttgctgtaatcaagggtggctctttcaacggatcc 14211842
Query: 2549 actgtactaacaaagacatc 2568
|||||||||||||| |||||
Sbjct: 14211841 actgtactaacaaaaacatc 14211822
Score = 60.0 bits (30), Expect = 2e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||| ||||||||||| | || || |||| ||| ||||||||||||||
Sbjct: 14212632 attcatagctccagctttcttgtggtgatcaaatccaggccgcttctcacgagaaacata 14212573
Query: 2065 aacaagccgtggcaactcattcccatccgt 2094
|| || ||||| |||||||| ||||||||
Sbjct: 14212572 cactagacgtggtaactcattaccatccgt 14212543
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| || |||||||| |||||||| || || || |||| ||||||||||||||||
Sbjct: 11555918 gcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttcacgagaaaca 11555977
Query: 2063 ta 2064
||
Sbjct: 11555978 ta 11555979
Score = 60.0 bits (30), Expect = 2e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| |||||||| ||||| |||||||||||| | ||| || ||||||||||| |||
Sbjct: 6227230 aagaaaacaatgttgcggttagcatatcgatcactcttgtcgattccatcaaatctctgt 6227289
Query: 1850 ggaaactgaacatagcaa 1867
|| ||||||||| |||||
Sbjct: 6227290 gggaactgaacaaagcaa 6227307
Score = 52.0 bits (26), Expect = 5e-004
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 2624 tcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaagac 2683
|||| ||||||||| ||||| |||||| |||| || ||||||||||| | | ||||||
Sbjct: 6228390 tcgatgtaagtttctcggttaataggagaccatttagggaactgatccaacacccaagaa 6228449
Query: 2684 aaagcaaaccaaacttcacaaataacagat 2713
| ||||||||||| ||||| || ||||||
Sbjct: 6228450 acagcaaaccaaatctcacatatcacagat 6228479
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 14214224 acccaaaactgctcgtttctccaccaatc 14214196
Score = 50.1 bits (25), Expect = 0.002
Identities = 91/113 (80%)
Strand = Plus / Plus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || || |||| ||| | || |||||||| ||
Sbjct: 6225975 gatgtgactgtgaaatttgtgtcgagaccagcgagcattttgaggaatccttggaaaacg 6226034
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 6226035 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 6226087
Score = 46.1 bits (23), Expect = 0.034
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||||||||||||| || | ||||||||||| || || ||||| ||||| |||||||
Sbjct: 14213721 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatct 14213663
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 11555338 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 11555397
Query: 1740 ccacata 1746
|||||||
Sbjct: 11555398 ccacata 11555404
Score = 42.1 bits (21), Expect = 0.53
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2278 ttctttcacaaaagaaggttg 2298
|||||||||||||||||||||
Sbjct: 6227953 ttctttcacaaaagaaggttg 6227973
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project)
Length = 93257
Score = 170 bits (86), Expect = 9e-040
Identities = 239/290 (82%)
Strand = Plus / Plus
Query: 2279 tctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaa 2338
||||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| ||
Sbjct: 43864 tctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaatag 43923
Query: 2339 aactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgca 2398
|| || || |||||||||||||||||| |||||||||||| || ||||||||| |||||
Sbjct: 43924 aattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgca 43983
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| ||||||||||| || | |||||| || | |||||||||||| ||||| ||||||
Sbjct: 43984 aactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaaca 44043
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgcca 2518
||||| | |||||| || || ||||| ||||||| |||||| || || || ||||| |
Sbjct: 44044 taacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgct 44103
Query: 2519 gtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||| || ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 44104 gtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatc 44153
Score = 129 bits (65), Expect = 3e-027
Identities = 227/281 (80%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 42035 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 42094
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 42095 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 42154
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 42155 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 42214
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 42215 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 42274
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|| ||||| | ||||||||| || || || ||||| |||||
Sbjct: 42275 aacccagtaagaatatcttccgtcacggaaccatagatcca 42315
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 41611 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 41670
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 41671 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 41730
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 41731 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 41790
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 41791 tcctcaatgctcacaccgctccatctcagctcca 41824
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 41371 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 41430
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 41431 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 41490
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 41491 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 41550
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 41551 taagagacaccagccac 41567
Score = 91.7 bits (46), Expect = 6e-016
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||||||||||| ||| || |||||||| ||||| ||||| ||| |||
Sbjct: 43636 atcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtc 43695
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
||||| || ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||
Sbjct: 43696 cagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaac 43755
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 43756 tcttcatactctctct 43771
Score = 79.8 bits (40), Expect = 2e-012
Identities = 160/200 (80%)
Strand = Plus / Plus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||| || |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| ||
Sbjct: 43068 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 43127
Query: 1853 aactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctct 1912
||||| |||||||| ||| |||| | || || |||||||||||||||||||| |||
Sbjct: 43128 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 43187
Query: 1913 ctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcacca 1972
||| ||| || ||| |||| ||||| |||||||||||||| || | |||||| || |||
Sbjct: 43188 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 43247
Query: 1973 ttcgtcaggacagctgatac 1992
|| || || ||||| |||||
Sbjct: 43248 ttggtaagaacagcagatac 43267
Score = 75.8 bits (38), Expect = 4e-011
Identities = 122/150 (81%)
Strand = Plus / Plus
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccac 2722
|||||||| ||||||||||| || |||||||| | ||||| ||||| || | ||||
Sbjct: 44583 aactgatcaagaagccaagaaaatgcaaaccagatctcacagataaccgaggtcaaccac 44642
Query: 2723 aacccataagcatcttccactggatgagttatacgatattgaaagaagaaacataggatg 2782
|| ||| |||| || ||| || |||||| |||||||||| ||||||||||| | ||||
Sbjct: 44643 aaaggatatgcatttttcacagggtgagttgtacgatattgcaagaagaaacacaagatg 44702
Query: 2783 ataagccggagaacaatcacgatccgataa 2812
||||||||||||| |||||| | |||||||
Sbjct: 44703 ataagccggagaataatcacaacccgataa 44732
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| || |||||||| |||||||| || || || |||| ||||||||||||||||
Sbjct: 43429 gcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttcacgagaaaca 43488
Query: 2063 ta 2064
||
Sbjct: 43489 ta 43490
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 42849 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 42908
Query: 1740 ccacata 1746
|||||||
Sbjct: 42909 ccacata 42915
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
Length = 197252
Score = 170 bits (86), Expect = 9e-040
Identities = 239/290 (82%)
Strand = Plus / Plus
Query: 2279 tctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaa 2338
||||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| ||
Sbjct: 57581 tctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaatag 57640
Query: 2339 aactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgca 2398
|| || || |||||||||||||||||| |||||||||||| || ||||||||| |||||
Sbjct: 57641 aattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgca 57700
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| ||||||||||| || | |||||| || | |||||||||||| ||||| ||||||
Sbjct: 57701 aactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaaca 57760
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgcca 2518
||||| | |||||| || || ||||| ||||||| |||||| || || || ||||| |
Sbjct: 57761 taacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgct 57820
Query: 2519 gtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||| || ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 57821 gtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatc 57870
Score = 129 bits (65), Expect = 3e-027
Identities = 227/281 (80%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 55752 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 55811
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 55812 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 55871
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 55872 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 55931
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 55932 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 55991
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|| ||||| | ||||||||| || || || ||||| |||||
Sbjct: 55992 aacccagtaagaatatcttccgtcacggaaccatagatcca 56032
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 55328 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 55387
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 55388 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 55447
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 55448 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 55507
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 55508 tcctcaatgctcacaccgctccatctcagctcca 55541
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 55088 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 55147
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 55148 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 55207
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 55208 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 55267
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 55268 taagagacaccagccac 55284
Score = 91.7 bits (46), Expect = 6e-016
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||||||||||| ||| || |||||||| ||||| ||||| ||| |||
Sbjct: 57353 atcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtc 57412
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
||||| || ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||
Sbjct: 57413 cagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaac 57472
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 57473 tcttcatactctctct 57488
Score = 79.8 bits (40), Expect = 2e-012
Identities = 160/200 (80%)
Strand = Plus / Plus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||| || |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| ||
Sbjct: 56785 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 56844
Query: 1853 aactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctct 1912
||||| |||||||| ||| |||| | || || |||||||||||||||||||| |||
Sbjct: 56845 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 56904
Query: 1913 ctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcacca 1972
||| ||| || ||| |||| ||||| |||||||||||||| || | |||||| || |||
Sbjct: 56905 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 56964
Query: 1973 ttcgtcaggacagctgatac 1992
|| || || ||||| |||||
Sbjct: 56965 ttggtaagaacagcagatac 56984
Score = 75.8 bits (38), Expect = 4e-011
Identities = 122/150 (81%)
Strand = Plus / Plus
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccac 2722
|||||||| ||||||||||| || |||||||| | ||||| ||||| || | ||||
Sbjct: 58300 aactgatcaagaagccaagaaaatgcaaaccagatctcacagataaccgaggtcaaccac 58359
Query: 2723 aacccataagcatcttccactggatgagttatacgatattgaaagaagaaacataggatg 2782
|| ||| |||| || ||| || |||||| |||||||||| ||||||||||| | ||||
Sbjct: 58360 aaaggatatgcatttttcacagggtgagttgtacgatattgcaagaagaaacacaagatg 58419
Query: 2783 ataagccggagaacaatcacgatccgataa 2812
||||||||||||| |||||| | |||||||
Sbjct: 58420 ataagccggagaataatcacaacccgataa 58449
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| || |||||||| |||||||| || || || |||| ||||||||||||||||
Sbjct: 57146 gcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttcacgagaaaca 57205
Query: 2063 ta 2064
||
Sbjct: 57206 ta 57207
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 56566 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 56625
Query: 1740 ccacata 1746
|||||||
Sbjct: 56626 ccacata 56632
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 170 bits (86), Expect = 9e-040
Identities = 239/290 (82%)
Strand = Plus / Plus
Query: 2279 tctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaa 2338
||||| |||||||| ||||| || |||||||| | |||||||||||| | ||||| ||
Sbjct: 15643578 tctttaacaaaagacggttggatcttgtccttcaagtaatctatcttctgggcaaaatag 15643637
Query: 2339 aactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgca 2398
|| || || |||||||||||||||||| |||||||||||| || ||||||||| |||||
Sbjct: 15643638 aattcaggggccctaggttcaatgttgaatttcttgcaaaatggtacccatttctttgca 15643697
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| ||||||||||| || | |||||| || | |||||||||||| ||||| ||||||
Sbjct: 15643698 aactcagcggtttcagaaagggattcaaaggtaagcatagctgaaccatcatctgaaaca 15643757
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgcca 2518
||||| | |||||| || || ||||| ||||||| |||||| || || || ||||| |
Sbjct: 15643758 taacaggctactttatctaccgggtagtccacagaaagaatcgagagaactgtgtttgct 15643817
Query: 2519 gtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||| || ||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 15643818 gtaacaaggggaggctctttcaatgggtccactgtactaacaaacacatc 15643867
Score = 129 bits (65), Expect = 3e-027
Identities = 227/281 (80%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 15641749 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 15641808
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 15641809 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 15641868
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 15641869 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 15641928
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 15641929 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 15641988
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|| ||||| | ||||||||| || || || ||||| |||||
Sbjct: 15641989 aacccagtaagaatatcttccgtcacggaaccatagatcca 15642029
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 15641325 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 15641384
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 15641385 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 15641444
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 15641445 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 15641504
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 15641505 tcctcaatgctcacaccgctccatctcagctcca 15641538
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 15641085 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 15641144
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 15641145 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 15641204
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 15641205 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 15641264
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 15641265 taagagacaccagccac 15641281
Score = 93.7 bits (47), Expect = 2e-016
Identities = 151/183 (82%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||| |||| ||| ||||||| |||| |||||| || || |||||||||||
Sbjct: 18300141 atcaaagaacacaacgttacggtttgagtatctatcatgtctatcaatcccatcaaatct 18300082
Query: 1846 ttgtggaaactgaacatagcaagttttccttcct-agtgctggatccatcatgaaacaca 1904
|| |||||||||||||| ||| |||| |||| | ||| || ||||||||||||||||
Sbjct: 18300081 ctgcggaaactgaacataacaaactttctttcccgattgcggg-tccatcatgaaacaca 18300023
Query: 1905 tagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagat 1964
||| ||||||| ||||||||| | |||| ||||||||||||||| ||||||||||| |
Sbjct: 18300022 tagattctctaattgctttgctgttgttgatgtagtgatcacaatcgacattaagaaggt 18299963
Query: 1965 aag 1967
|||
Sbjct: 18299962 aag 18299960
Score = 91.7 bits (46), Expect = 6e-016
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||||||||||| ||| || |||||||| ||||| ||||| ||| |||
Sbjct: 15643350 atcattccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtc 15643409
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
||||| || ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||
Sbjct: 15643410 cagccttcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaac 15643469
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 15643470 tcttcatactctctct 15643485
Score = 79.8 bits (40), Expect = 2e-012
Identities = 160/200 (80%)
Strand = Plus / Plus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||| || |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| ||
Sbjct: 15642782 aagactatattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgaggg 15642841
Query: 1853 aactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctct 1912
||||| |||||||| ||| |||| | || || |||||||||||||||||||| |||
Sbjct: 15642842 aactggacatagcagcacttctttccaatagccgggtccatcatgaaacacatagcttct 15642901
Query: 1913 ctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcacca 1972
||| ||| || ||| |||| ||||| |||||||||||||| || | |||||| || |||
Sbjct: 15642902 ttaatagccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctcca 15642961
Query: 1973 ttcgtcaggacagctgatac 1992
|| || || ||||| |||||
Sbjct: 15642962 ttggtaagaacagcagatac 15642981
Score = 75.8 bits (38), Expect = 4e-011
Identities = 122/150 (81%)
Strand = Plus / Plus
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccac 2722
|||||||| ||||||||||| || |||||||| | ||||| ||||| || | ||||
Sbjct: 15644297 aactgatcaagaagccaagaaaatgcaaaccagatctcacagataaccgaggtcaaccac 15644356
Query: 2723 aacccataagcatcttccactggatgagttatacgatattgaaagaagaaacataggatg 2782
|| ||| |||| || ||| || |||||| |||||||||| ||||||||||| | ||||
Sbjct: 15644357 aaaggatatgcatttttcacagggtgagttgtacgatattgcaagaagaaacacaagatg 15644416
Query: 2783 ataagccggagaacaatcacgatccgataa 2812
||||||||||||| |||||| | |||||||
Sbjct: 15644417 ataagccggagaataatcacaacccgataa 15644446
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 18298885 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 18298826
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 18298825 caagacactgcaaacca 18298809
Score = 63.9 bits (32), Expect = 1e-007
Identities = 158/200 (79%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 18299221 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 18299162
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||||| ||| || || || |||||||| | || || || ||||| |||||
Sbjct: 18299161 gtaagcatagctgcaccatcgtctgatacataacacgcaaccttatccacaggataatca 18299102
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| || |||||||| || || ||||| | ||||| | || || || || | ||||||
Sbjct: 18299101 actgctagaatggaaagaactgtgtttgctgtaatcaagggtggctctttcaacggatcc 18299042
Query: 2549 actgtactaacaaagacatc 2568
|||||||||||||| |||||
Sbjct: 18299041 actgtactaacaaaaacatc 18299022
Score = 60.0 bits (30), Expect = 2e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||| ||||||||||| | || || |||| ||| ||||||||||||||
Sbjct: 18299832 attcatagctccagctttcttgtggtgatcaaatccaggccgcttctcacgagaaacata 18299773
Query: 2065 aacaagccgtggcaactcattcccatccgt 2094
|| || ||||| |||||||| ||||||||
Sbjct: 18299772 cactagacgtggtaactcattaccatccgt 18299743
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| || |||||||| |||||||| || || || |||| ||||||||||||||||
Sbjct: 15643143 gcattcatagctccagcctttttgtggtgttgaaatccaggccgcttttcacgagaaaca 15643202
Query: 2063 ta 2064
||
Sbjct: 15643203 ta 15643204
Score = 60.0 bits (30), Expect = 2e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| |||||||| ||||| |||||||||||| | ||| || ||||||||||| |||
Sbjct: 10314485 aagaaaacaatgttgcggttagcatatcgatcactcttgtcgattccatcaaatctctgt 10314544
Query: 1850 ggaaactgaacatagcaa 1867
|| ||||||||| |||||
Sbjct: 10314545 gggaactgaacaaagcaa 10314562
Score = 52.0 bits (26), Expect = 5e-004
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 2624 tcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaagac 2683
|||| ||||||||| ||||| |||||| |||| || ||||||||||| | | ||||||
Sbjct: 10315645 tcgatgtaagtttctcggttaataggagaccatttagggaactgatccaacacccaagaa 10315704
Query: 2684 aaagcaaaccaaacttcacaaataacagat 2713
| ||||||||||| ||||| || ||||||
Sbjct: 10315705 acagcaaaccaaatctcacatatcacagat 10315734
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 18301424 acccaaaactgctcgtttctccaccaatc 18301396
Score = 50.1 bits (25), Expect = 0.002
Identities = 91/113 (80%)
Strand = Plus / Plus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || || |||| ||| | || |||||||| ||
Sbjct: 10313230 gatgtgactgtgaaatttgtgtcgagaccagcgagcattttgaggaatccttggaaaacg 10313289
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 10313290 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 10313342
Score = 46.1 bits (23), Expect = 0.034
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||||||||||||| || | ||||||||||| || || ||||| ||||| |||||||
Sbjct: 18300921 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatct 18300863
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 15642563 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 15642622
Query: 1740 ccacata 1746
|||||||
Sbjct: 15642623 ccacata 15642629
Score = 42.1 bits (21), Expect = 0.53
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2278 ttctttcacaaaagaaggttg 2298
|||||||||||||||||||||
Sbjct: 10315208 ttctttcacaaaagaaggttg 10315228
>gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
mRNA, complete cds
Length = 3771
Score = 163 bits (82), Expect = 2e-037
Identities = 317/393 (80%), Gaps = 2/393 (0%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|||||||| || ||||| ||||| ||||| |||||||||||||| |||| ||| ||||||
Sbjct: 2102 ggtccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggttt 2043
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
| |||| |||||| || || ||||||||||| || |||||||||||||| ||| |
Sbjct: 2042 gagtatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaact 1983
Query: 1871 ttccttcct-agtgctggatccatcatgaaacacatagcctctctaagagctttgctgct 1929
||| |||| | ||| || ||||||||||||||||||| ||||||| ||||||||| |
Sbjct: 1982 ttctttcccgattgcggg-tccatcatgaaacacatagattctctaattgctttgctgtt 1924
Query: 1930 attgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctga 1989
|||| ||||||||||||||| ||||||||||| |||| | | || | || ||||| ||
Sbjct: 1923 gttgatgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcaga 1864
Query: 1990 tacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctctt 2049
|| || ||||| | |||||| || ||||| ||||||||||| | || || |||| |||
Sbjct: 1863 gactcggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgctt 1804
Query: 2050 ttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccact 2109
|||||||||||||| || || ||||| |||||||| |||||||| ||| | | |||||
Sbjct: 1803 ctcacgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccact 1744
Query: 2110 gtggcccaagaatacttggatcattccnggatg 2142
|| |||||||| || || |||||||| |||||
Sbjct: 1743 atgacccaagaacacctgaatcattccaggatg 1711
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||||||||| || || ||||| ||||| ||||||||
Sbjct: 2592 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatctc 2533
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 2532 ttttccccattcggttttatc 2512
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 1235 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 1176
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 1175 caagacactgcaaacca 1159
Score = 63.9 bits (32), Expect = 1e-007
Identities = 158/200 (79%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 1484 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 1425
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||||| ||| || || || |||||||| | || || || ||||| |||||
Sbjct: 1424 gtaagcatagctgcaccatcgtctgatacataacacgcaaccttatccacaggataatca 1365
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| || |||||||| || || ||||| | ||||| | || || || || | ||||||
Sbjct: 1364 actgctagaatggaaagaactgtgtttgctgtaatcaagggtggctctttcaacggatcc 1305
Query: 2549 actgtactaacaaagacatc 2568
|||||||||||||| |||||
Sbjct: 1304 actgtactaacaaaaacatc 1285
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 3011 acccaaaactgctcgtttctccaccaatc 2983
>dbj|BD022677.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3828
Score = 163 bits (82), Expect = 2e-037
Identities = 317/393 (80%), Gaps = 2/393 (0%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|||||||| || ||||| ||||| ||||| |||||||||||||| |||| ||| ||||||
Sbjct: 2124 ggtccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggttt 2065
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
| |||| |||||| || || ||||||||||| || |||||||||||||| ||| |
Sbjct: 2064 gagtatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaact 2005
Query: 1871 ttccttcct-agtgctggatccatcatgaaacacatagcctctctaagagctttgctgct 1929
||| |||| | ||| || ||||||||||||||||||| ||||||| ||||||||| |
Sbjct: 2004 ttctttcccgattgcggg-tccatcatgaaacacatagattctctaattgctttgctgtt 1946
Query: 1930 attgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctga 1989
|||| ||||||||||||||| ||||||||||| |||| | | || | || ||||| ||
Sbjct: 1945 gttgatgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcaga 1886
Query: 1990 tacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctctt 2049
|| || ||||| | |||||| || ||||| ||||||||||| | || || |||| |||
Sbjct: 1885 gactcggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgctt 1826
Query: 2050 ttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccact 2109
|||||||||||||| || || ||||| |||||||| |||||||| ||| | | |||||
Sbjct: 1825 ctcacgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccact 1766
Query: 2110 gtggcccaagaatacttggatcattccnggatg 2142
|| |||||||| || || |||||||| |||||
Sbjct: 1765 atgacccaagaacacctgaatcattccaggatg 1733
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||||||||| || || ||||| ||||| ||||||||
Sbjct: 2614 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatctc 2555
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 2554 ttttccccattcggttttatc 2534
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 1257 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 1198
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 1197 caagacactgcaaacca 1181
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 3033 acccaaaactgctcgtttctccaccaatc 3005
Score = 44.1 bits (22), Expect = 0.13
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 2240 actttgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgt 2299
||||| ||||||||||| || ||||||||||| || | ||| | ||||||| ||| ||
Sbjct: 1635 actttaaactcttcataatctctcttcatagcacgacgttccctgacaaaagcaggatga 1576
Query: 2300 attttgtcctttaggtaatctatctt 2325
| ||||| ||| |||||||| |||||
Sbjct: 1575 actttgttcttcaggtaatccatctt 1550
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2543 ggatccactgtactaacaaagacatc 2568
|||||||||||||||||||| |||||
Sbjct: 1332 ggatccactgtactaacaaaaacatc 1307
Score = 42.1 bits (21), Expect = 0.53
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| | ||||| || || || ||||| |||||||||||
Sbjct: 1506 ttcttacaaaaaggaacccattttgtagcaaaatcagctgtatcagagagagcttcaaat 1447
Query: 2429 gtcaacatagctg 2441
|| | ||||||||
Sbjct: 1446 gtaagcatagctg 1434
>emb|AX505864.1| Sequence 559 from Patent WO0216655
Length = 3255
Score = 163 bits (82), Expect = 2e-037
Identities = 317/393 (80%), Gaps = 2/393 (0%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|||||||| || ||||| ||||| ||||| |||||||||||||| |||| ||| ||||||
Sbjct: 1886 ggtccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggttt 1827
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
| |||| |||||| || || ||||||||||| || |||||||||||||| ||| |
Sbjct: 1826 gagtatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaact 1767
Query: 1871 ttccttcct-agtgctggatccatcatgaaacacatagcctctctaagagctttgctgct 1929
||| |||| | ||| || ||||||||||||||||||| ||||||| ||||||||| |
Sbjct: 1766 ttctttcccgattgcggg-tccatcatgaaacacatagattctctaattgctttgctgtt 1708
Query: 1930 attgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctga 1989
|||| ||||||||||||||| ||||||||||| |||| | | || | || ||||| ||
Sbjct: 1707 gttgatgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcaga 1648
Query: 1990 tacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctctt 2049
|| || ||||| | |||||| || ||||| ||||||||||| | || || |||| |||
Sbjct: 1647 gactcggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgctt 1588
Query: 2050 ttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccact 2109
|||||||||||||| || || ||||| |||||||| |||||||| ||| | | |||||
Sbjct: 1587 ctcacgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccact 1528
Query: 2110 gtggcccaagaatacttggatcattccnggatg 2142
|| |||||||| || || |||||||| |||||
Sbjct: 1527 atgacccaagaacacctgaatcattccaggatg 1495
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||||||||| || || ||||| ||||| ||||||||
Sbjct: 2376 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatctc 2317
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 2316 ttttccccattcggttttatc 2296
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 1019 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 960
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 959 caagacactgcaaacca 943
Score = 63.9 bits (32), Expect = 1e-007
Identities = 158/200 (79%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 1268 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 1209
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||||| ||| || || || |||||||| | || || || ||||| |||||
Sbjct: 1208 gtaagcatagctgcaccatcgtctgatacataacacgcaaccttatccacaggataatca 1149
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| || |||||||| || || ||||| | ||||| | || || || || | ||||||
Sbjct: 1148 actgctagaatggaaagaactgtgtttgctgtaatcaagggtggctctttcaacggatcc 1089
Query: 2549 actgtactaacaaagacatc 2568
|||||||||||||| |||||
Sbjct: 1088 actgtactaacaaaaacatc 1069
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 2795 acccaaaactgctcgtttctccaccaatc 2767
>emb|AX030944.1| Sequence 7 from Patent WO9800549
Length = 3828
Score = 163 bits (82), Expect = 2e-037
Identities = 317/393 (80%), Gaps = 2/393 (0%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|||||||| || ||||| ||||| ||||| |||||||||||||| |||| ||| ||||||
Sbjct: 2124 ggtccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggttt 2065
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
| |||| |||||| || || ||||||||||| || |||||||||||||| ||| |
Sbjct: 2064 gagtatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaact 2005
Query: 1871 ttccttcct-agtgctggatccatcatgaaacacatagcctctctaagagctttgctgct 1929
||| |||| | ||| || ||||||||||||||||||| ||||||| ||||||||| |
Sbjct: 2004 ttctttcccgattgcggg-tccatcatgaaacacatagattctctaattgctttgctgtt 1946
Query: 1930 attgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctga 1989
|||| ||||||||||||||| ||||||||||| |||| | | || | || ||||| ||
Sbjct: 1945 gttgatgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcaga 1886
Query: 1990 tacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctctt 2049
|| || ||||| | |||||| || ||||| ||||||||||| | || || |||| |||
Sbjct: 1885 gactcggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgctt 1826
Query: 2050 ttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccact 2109
|||||||||||||| || || ||||| |||||||| |||||||| ||| | | |||||
Sbjct: 1825 ctcacgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccact 1766
Query: 2110 gtggcccaagaatacttggatcattccnggatg 2142
|| |||||||| || || |||||||| |||||
Sbjct: 1765 atgacccaagaacacctgaatcattccaggatg 1733
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||||||||| || || ||||| ||||| ||||||||
Sbjct: 2614 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatctc 2555
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 2554 ttttccccattcggttttatc 2534
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 1257 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 1198
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 1197 caagacactgcaaacca 1181
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 3033 acccaaaactgctcgtttctccaccaatc 3005
Score = 44.1 bits (22), Expect = 0.13
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 2240 actttgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgt 2299
||||| ||||||||||| || ||||||||||| || | ||| | ||||||| ||| ||
Sbjct: 1635 actttaaactcttcataatctctcttcatagcacgacgttccctgacaaaagcaggatga 1576
Query: 2300 attttgtcctttaggtaatctatctt 2325
| ||||| ||| |||||||| |||||
Sbjct: 1575 actttgttcttcaggtaatccatctt 1550
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2543 ggatccactgtactaacaaagacatc 2568
|||||||||||||||||||| |||||
Sbjct: 1332 ggatccactgtactaacaaaaacatc 1307
Score = 42.1 bits (21), Expect = 0.53
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| | ||||| || || || ||||| |||||||||||
Sbjct: 1506 ttcttacaaaaaggaacccattttgtagcaaaatcagctgtatcagagagagcttcaaat 1447
Query: 2429 gtcaacatagctg 2441
|| | ||||||||
Sbjct: 1446 gtaagcatagctg 1434
>gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 map mi238, complete
sequence
Length = 88770
Score = 163 bits (82), Expect = 2e-037
Identities = 196/234 (83%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| ||||| || ||||| |||||||||||||| || |||||||| | |||||||||
Sbjct: 68889 cttcattgcccgtctctctttgacaaaagaaggttggatcttgtccttcaagtaatctat 68948
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| | | ||| || ||||| ||||| ||||||||||||||| |||||||||||| ||
Sbjct: 68949 cttctgggaaaaatagaactcaggagctctaggttcaatgttgaatttcttgcaaaaagg 69008
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
||||||||| ||| ||||| || |||||||| || ||||||||||| | |||||||||
Sbjct: 69009 tacccatttctttgagaactcagccgtttcagaaagggcttcaaaagttagcatagctga 69068
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaag 2496
||||||||| ||||| ||||| | ||||| || || ||||| |||||||||||
Sbjct: 69069 accgtcatccgaaacgtaacacgcaactttatccactgggtagtccacagcaag 69122
Score = 99.6 bits (50), Expect = 3e-018
Identities = 173/214 (80%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||||||| | |||| ||| || ||||||||||||||||| |||||||| || |
Sbjct: 68026 atcaaagaagacagtattcctgttggcgtatcgatcatgcaagtcaataccatcgaaacg 68085
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||||||||| || |||||| ||| |||| | ||| || |||||||||||||||||
Sbjct: 68086 ttgtggaaactgcacgtagcaacacttctttccgattgcagggtccatcatgaaacacat 68145
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| || ||| || |||||| | |||||||| ||||||||||| || || | ||||||
Sbjct: 68146 ggcttccttaatcgccttgctgttgttgaagtaatgatcacaatcaacgttcaaaagata 68205
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|| ||||| || || ||||| || || ||||||
Sbjct: 68206 cgccccattagtaagaacagcagaaacacgaatc 68239
Score = 95.6 bits (48), Expect = 4e-017
Identities = 165/204 (80%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| ||||| ||||| || || ||||| ||||| || ||||| ||||| | ||
Sbjct: 66587 agaagagacgtccatttgaagacgtaaagctctgcaaagtctccatcttcatctgaggct 66646
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||||||||| |||||||||||||| |||||||| | ||||| | |||||||| |||
Sbjct: 66647 tttgatgtgactgtgaagtttgtgtctatccctgcaaaaactttgagtagaccttgaaac 66706
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| || || || ||||| || |||||||||||||| || ||||||||
Sbjct: 66707 actgcaaaaagatgagccgatgttccaccgattacccaaaactgctcgttcctccaccag 66766
Query: 868 tcctcaatgccaacaccactccat 891
|| |||| | | ||| ||||||||
Sbjct: 66767 tcttcaagggccacatcactccat 66790
Score = 87.7 bits (44), Expect = 1e-014
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 1691 acaggatcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaaca 1750
||||||||||| ||||||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 67831 acaggatcatacccatacaaggcctgcctgttgaaacagcagccagtgcccacatacaca 67890
Query: 1751 ggtccttgaatgccatctagacccttca 1778
|| ||||| || ||||||| |||||||
Sbjct: 67891 ggaccttgtataccatctaaccccttca 67918
Score = 81.8 bits (41), Expect = 6e-013
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 1234 cagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagta 1293
|||||||| ||||||||||| ||||||||||||||||| ||||| | ||||||||| ||
Sbjct: 67217 cagtagattgatatccaaccccttgcatgcatcttgaatccagtaagaatatcttctgtc 67276
Query: 1294 acagagccatatatccatccgatct 1318
||||| || || ||||| |||||||
Sbjct: 67277 acagaaccgtagatccacccgatct 67301
Score = 73.8 bits (37), Expect = 1e-010
Identities = 133/165 (80%)
Strand = Plus / Plus
Query: 2648 ggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaata 2707
|||||||| |||||||||||||| ||||||||||| || |||||||| | |||||||||
Sbjct: 69357 ggataccattttgggaactgatcaagaagccaagaaaaggcaaaccagatctcacaaata 69416
Query: 2708 acagatacaagccacaacccataagcatcttccactggatgagttatacgatattgaaag 2767
|| || | ||||| |||| ||||||| ||| ||||||||| ||||||| || |||
Sbjct: 69417 actgaggtcaaccacagggcatatgcatctttcacgggatgagttgtacgataatgcaag 69476
Query: 2768 aagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| | | ||||| ||||||||||| ||||| || ||||||
Sbjct: 69477 aagactcccaaaatgatgagccggagaactatcactatacgataa 69521
Score = 60.0 bits (30), Expect = 2e-006
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||||||||| || ||||| |||||||| || | |||||||| ||| ||
Sbjct: 67013 gggatggatgtaattggatagactatggtattgatgtaggcaattctctccaaaagtttc 67072
Query: 1090 agccttccattgtaaccataccagataggacagtgtct 1127
| ||| ||||| || |||||||| ||||| || |||||
Sbjct: 67073 aacctcccattatagccataccatatagggcaatgtct 67110
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1994 cgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttca 2053
|||| ||| |||||||| || |||||||||||||||||||| || || || | |||||||
Sbjct: 68410 cgaaccaaggcattcatagctccagccttcttgtggtgctgaaatccaggacgcttttca 68469
Query: 2054 cgagaaacata 2064
|| || |||||
Sbjct: 68470 cgggacacata 68480
Score = 38.2 bits (19), Expect = 8.2
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggcca 2166
||||| || ||||| ||||||||||| || ||||||||
Sbjct: 68644 atcatcccaggatggtctctagggttgttaccaggcca 68681
>ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synthase/ transferase,
transferring glycosyl groups AT4G39350 (CESA2) mRNA,
complete cds
Length = 3726
Score = 163 bits (82), Expect = 2e-037
Identities = 317/393 (80%), Gaps = 2/393 (0%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|||||||| || ||||| ||||| ||||| |||||||||||||| |||| ||| ||||||
Sbjct: 2055 ggtccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggttt 1996
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
| |||| |||||| || || ||||||||||| || |||||||||||||| ||| |
Sbjct: 1995 gagtatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaact 1936
Query: 1871 ttccttcct-agtgctggatccatcatgaaacacatagcctctctaagagctttgctgct 1929
||| |||| | ||| || ||||||||||||||||||| ||||||| ||||||||| |
Sbjct: 1935 ttctttcccgattgcggg-tccatcatgaaacacatagattctctaattgctttgctgtt 1877
Query: 1930 attgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctga 1989
|||| ||||||||||||||| ||||||||||| |||| | | || | || ||||| ||
Sbjct: 1876 gttgatgtagtgatcacaatcgacattaagaaggtaaggagcgtttgatagaacagcaga 1817
Query: 1990 tacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctctt 2049
|| || ||||| | |||||| || ||||| ||||||||||| | || || |||| |||
Sbjct: 1816 gactcggatcaaggaattcatagctccagctttcttgtggtgatcaaatccaggccgctt 1757
Query: 2050 ttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccact 2109
|||||||||||||| || || ||||| |||||||| |||||||| ||| | | |||||
Sbjct: 1756 ctcacgagaaacatacactagacgtggtaactcattaccatccgtatcacgaactccact 1697
Query: 2110 gtggcccaagaatacttggatcattccnggatg 2142
|| |||||||| || || |||||||| |||||
Sbjct: 1696 atgacccaagaacacctgaatcattccaggatg 1664
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||||||||| || || ||||| ||||| ||||||||
Sbjct: 2545 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatctc 2486
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 2485 ttttccccattcggttttatc 2465
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 1188 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 1129
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 1128 caagacactgcaaacca 1112
Score = 63.9 bits (32), Expect = 1e-007
Identities = 158/200 (79%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 1437 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 1378
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||||| ||| || || || |||||||| | || || || ||||| |||||
Sbjct: 1377 gtaagcatagctgcaccatcgtctgatacataacacgcaaccttatccacaggataatca 1318
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| || |||||||| || || ||||| | ||||| | || || || || | ||||||
Sbjct: 1317 actgctagaatggaaagaactgtgtttgctgtaatcaagggtggctctttcaacggatcc 1258
Query: 2549 actgtactaacaaagacatc 2568
|||||||||||||| |||||
Sbjct: 1257 actgtactaacaaaaacatc 1238
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 2964 acccaaaactgctcgtttctccaccaatc 2936
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 163 bits (82), Expect = 2e-037
Identities = 196/234 (83%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| ||||| || ||||| |||||||||||||| || |||||||| | |||||||||
Sbjct: 10876751 cttcattgcccgtctctctttgacaaaagaaggttggatcttgtccttcaagtaatctat 10876810
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| | | ||| || ||||| ||||| ||||||||||||||| |||||||||||| ||
Sbjct: 10876811 cttctgggaaaaatagaactcaggagctctaggttcaatgttgaatttcttgcaaaaagg 10876870
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
||||||||| ||| ||||| || |||||||| || ||||||||||| | |||||||||
Sbjct: 10876871 tacccatttctttgagaactcagccgtttcagaaagggcttcaaaagttagcatagctga 10876930
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaag 2496
||||||||| ||||| ||||| | ||||| || || ||||| |||||||||||
Sbjct: 10876931 accgtcatccgaaacgtaacacgcaactttatccactgggtagtccacagcaag 10876984
Score = 99.6 bits (50), Expect = 3e-018
Identities = 173/214 (80%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||||||| | |||| ||| || ||||||||||||||||| |||||||| || |
Sbjct: 10875888 atcaaagaagacagtattcctgttggcgtatcgatcatgcaagtcaataccatcgaaacg 10875947
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||||||||| || |||||| ||| |||| | ||| || |||||||||||||||||
Sbjct: 10875948 ttgtggaaactgcacgtagcaacacttctttccgattgcagggtccatcatgaaacacat 10876007
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| || ||| || |||||| | |||||||| ||||||||||| || || | ||||||
Sbjct: 10876008 ggcttccttaatcgccttgctgttgttgaagtaatgatcacaatcaacgttcaaaagata 10876067
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|| ||||| || || ||||| || || ||||||
Sbjct: 10876068 cgccccattagtaagaacagcagaaacacgaatc 10876101
Score = 95.6 bits (48), Expect = 4e-017
Identities = 165/204 (80%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| ||||| ||||| || || ||||| ||||| || ||||| ||||| | ||
Sbjct: 10874449 agaagagacgtccatttgaagacgtaaagctctgcaaagtctccatcttcatctgaggct 10874508
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||||||||| |||||||||||||| |||||||| | ||||| | |||||||| |||
Sbjct: 10874509 tttgatgtgactgtgaagtttgtgtctatccctgcaaaaactttgagtagaccttgaaac 10874568
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| || || || ||||| || |||||||||||||| || ||||||||
Sbjct: 10874569 actgcaaaaagatgagccgatgttccaccgattacccaaaactgctcgttcctccaccag 10874628
Query: 868 tcctcaatgccaacaccactccat 891
|| |||| | | ||| ||||||||
Sbjct: 10874629 tcttcaagggccacatcactccat 10874652
Score = 91.7 bits (46), Expect = 6e-016
Identities = 247/314 (78%)
Strand = Plus / Minus
Query: 2381 ggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagct 2440
||||||||||| ||||||||||| || || | ||| ||||||||||| || | ||| ||
Sbjct: 9293944 ggaacccattttcttgcaaactcggctgtgtaagagagagcttcaaatgtaagcattgca 9293885
Query: 2441 gaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatg 2500
| ||| ||||| || |||||||||| || || ||||| || ||||| ||||| |||||
Sbjct: 9293884 gcaccatcatctgatacataacatgcaaccttctcaaccggataatcaacagcgagaata 9293825
Query: 2501 gacaggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaaca 2560
||||| || || || | ||||| || ||||| || || | ||||||||| |||||||||
Sbjct: 9293824 gacagaaccgtatttgctgtaatcagtggaggctctttcaatggatccacagtactaaca 9293765
Query: 2561 aagacatcgattggagccaactgggatggctcaccctccctatcatatctcaatgcaagt 2620
|||||||||| || || |||| ||||||| || ||| | ||||| || | | |||
Sbjct: 9293764 aagacatcgacaggcgctaactctgatggcttcccttccttctcataccttagagaaagc 9293705
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
|| ||||| || ||||| | | ||| |||||||| |||||||||||||| |||| ||||
Sbjct: 9293704 ctgtcgagatatgtttctctttcgatgggataccattttgggaactgatcaagaatccaa 9293645
Query: 2681 gacaaagcaaacca 2694
|||| ||| |||||
Sbjct: 9293644 gacacagcgaacca 9293631
Score = 87.7 bits (44), Expect = 1e-014
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 1691 acaggatcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaaca 1750
||||||||||| ||||||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 10875693 acaggatcatacccatacaaggcctgcctgttgaaacagcagccagtgcccacatacaca 10875752
Query: 1751 ggtccttgaatgccatctagacccttca 1778
|| ||||| || ||||||| |||||||
Sbjct: 10875753 ggaccttgtataccatctaaccccttca 10875780
Score = 81.8 bits (41), Expect = 6e-013
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 1234 cagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagta 1293
|||||||| ||||||||||| ||||||||||||||||| ||||| | ||||||||| ||
Sbjct: 10875079 cagtagattgatatccaaccccttgcatgcatcttgaatccagtaagaatatcttctgtc 10875138
Query: 1294 acagagccatatatccatccgatct 1318
||||| || || ||||| |||||||
Sbjct: 10875139 acagaaccgtagatccacccgatct 10875163
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
|||||||||||||||||||| ||||||| || |||||| | |||| ||| ||||||||
Sbjct: 9294693 tccatcatgaaacacatagcttctctaattgccttgctgttgttgatgtaatgatcacag 9294634
Query: 1949 tccacattaagaagataag 1967
|||||||||||||| ||||
Sbjct: 9294633 tccacattaagaaggtaag 9294615
Score = 73.8 bits (37), Expect = 1e-010
Identities = 133/165 (80%)
Strand = Plus / Plus
Query: 2648 ggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaata 2707
|||||||| |||||||||||||| ||||||||||| || |||||||| | |||||||||
Sbjct: 10877219 ggataccattttgggaactgatcaagaagccaagaaaaggcaaaccagatctcacaaata 10877278
Query: 2708 acagatacaagccacaacccataagcatcttccactggatgagttatacgatattgaaag 2767
|| || | ||||| |||| ||||||| ||| ||||||||| ||||||| || |||
Sbjct: 10877279 actgaggtcaaccacagggcatatgcatctttcacgggatgagttgtacgataatgcaag 10877338
Query: 2768 aagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| | | ||||| ||||||||||| ||||| || ||||||
Sbjct: 10877339 aagactcccaaaatgatgagccggagaactatcactatacgataa 10877383
Score = 63.9 bits (32), Expect = 1e-007
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 798 accttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatt 857
|||||| |||| |||||| ||||| | |||| || |||||||||||||||||||| ||
Sbjct: 9296158 accttgaaacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtt 9296099
Query: 858 tctccaccaatc 869
||||||||||||
Sbjct: 9296098 tctccaccaatc 9296087
Score = 60.0 bits (30), Expect = 2e-006
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||||||||| || ||||| |||||||| || | |||||||| ||| ||
Sbjct: 10874875 gggatggatgtaattggatagactatggtattgatgtaggcaattctctccaaaagtttc 10874934
Query: 1090 agccttccattgtaaccataccagataggacagtgtct 1127
| ||| ||||| || |||||||| ||||| || |||||
Sbjct: 10874935 aacctcccattatagccataccatatagggcaatgtct 10874972
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1994 cgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttca 2053
|||| ||| |||||||| || |||||||||||||||||||| || || || | |||||||
Sbjct: 10876272 cgaaccaaggcattcatagctccagccttcttgtggtgctgaaatccaggacgcttttca 10876331
Query: 2054 cgagaaacata 2064
|| || |||||
Sbjct: 10876332 cgggacacata 10876342
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
||||||||||||||| ||||| ||||| ||||| || |||||||| |||||
Sbjct: 9295580 atgcatcttgaaacccgttaagatatcctcagtgaccgagccataaatcca 9295530
Score = 40.1 bits (20), Expect = 2.1
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 843 ccaaaactgctcatttctccacca 866
||||||||| ||||||||||||||
Sbjct: 14044024 ccaaaactgttcatttctccacca 14044047
Score = 38.2 bits (19), Expect = 8.2
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggcca 2166
||||| || ||||| ||||||||||| || ||||||||
Sbjct: 10876506 atcatcccaggatggtctctagggttgttaccaggcca 10876543
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1165 aacacttggttgagacgatcaga 1187
||||||| |||||||||||||||
Sbjct: 418320 aacactttgttgagacgatcaga 418298
>gb|CB255846.1|CB255846 17-E011665-027-006-B05-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772B056Q 5-PRIME, mRNA sequence
Length = 424
Score = 153 bits (77), Expect = 2e-034
Identities = 308/385 (80%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| || || || | || |
Sbjct: 420 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaagcaacaatcagtac 361
Query: 1740 ccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaa 1799
||||||| || || | || || ||||| | |||||||| |||||||| || ||||| |
Sbjct: 360 ccacatatactggacgctggataccatccaaccccttcatgttaatatcgaaaaagacta 301
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
| |||| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| |
Sbjct: 300 tattcctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactgga 241
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
||||||| ||| |||| | || || |||||||||||||||||||| ||| ||| ||
Sbjct: 240 catagcagcacttctttccaatagccgggtccatcatgaaacacatagcttctttaatag 181
Query: 1920 ctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattcgtca 1979
| || ||| |||| ||||| |||||||||||||| || | |||||| || ||||| || |
Sbjct: 180 ccttactgttattaaagtaatgatcacaatccacgttcaaaagatatgctccattggtaa 121
Query: 1980 ggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagc 2039
| ||||| ||||| || ||||| |||||||| || |||||||| |||||||| || || |
Sbjct: 120 gaacagcagatacacggatcaatgcattcatagctccagcctttttgtggtgttgaaatc 61
Query: 2040 ctggcctcttttcacgagaaacata 2064
| |||| ||||||||||||||||||
Sbjct: 60 caggccgcttttcacgagaaacata 36
>gb|AV552509.1|AV552509 AV552509 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ31f05R 5', mRNA sequence
Length = 496
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 308 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 249
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 248 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 189
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 188 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 129
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 128 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 69
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 68 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 9
Query: 1330 tc 1331
||
Sbjct: 8 tc 7
Score = 56.0 bits (28), Expect = 3e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 842 cccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcgaagctcca 901
|||| |||||||| || ||||||||||||||||||| ||||| ||||||| |||||||
Sbjct: 496 cccagaactgctcgttcctccaccaatcctcaatgctcacaccgctccatctcagctcca 437
>dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit,
complete cds, clone: RAFL22-92-A12
Length = 1456
Score = 147 bits (74), Expect = 1e-032
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 467 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 408
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 407 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 348
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 347 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 288
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 287 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 228
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccat 1329
|| ||||| | ||||||||| || || || ||||| ||||| || |||||||| ||||||
Sbjct: 227 aacccagtaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccat 168
Query: 1330 tc 1331
||
Sbjct: 167 tc 166
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 809 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 750
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 749 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 690
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 689 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 630
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 629 tcctcaatgctcacaccgctccatctcagctcca 596
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 1049 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 990
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 989 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 930
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 929 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 870
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 869 taagagacaccagccac 853
>gb|AF091713.1|AF091713 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
gene, complete cds
Length = 7234
Score = 131 bits (66), Expect = 7e-028
Identities = 138/162 (85%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 4293 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 4234
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 4233 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 4174
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 4173 gctcgtttctccaccattcctcaatgctaactccgctccatc 4132
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttc 2412
|||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 2203 tttcttacagaagggaacccattttcttgcaaactcagcagtttc 2159
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 2655 gcattcatggcgccagctttcttgtggtg 2627
Score = 42.1 bits (21), Expect = 0.53
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||| ||||||||||| |||| |||||| | ||| ||||| | |||||| || ||||
Sbjct: 1838 accacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacag 1779
Query: 2712 a 2712
|
Sbjct: 1778 a 1778
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1835 ccatcaaatctttgtggaaactgaacatagca 1866
|||||||| ||||| || ||||||||||||||
Sbjct: 2900 ccatcaaacctttgagggaactgaacatagca 2869
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 3681 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 3631
>gb|AF088917.1|AF088917 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX3)
mRNA, complete cds
Length = 3081
Score = 131 bits (66), Expect = 7e-028
Identities = 138/162 (85%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 2734 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 2675
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 2674 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 2615
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 2614 gctcgtttctccaccattcctcaatgctaactccgctccatc 2573
Score = 60.0 bits (30), Expect = 2e-006
Identities = 99/122 (81%)
Strand = Plus / Minus
Query: 1745 taaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttc 1804
||||| || ||||| || ||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1775 taaactggaccttggattccatctagacctttcatattgatatcaaagaagactgtgttt 1716
Query: 1805 cggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatag 1864
| ||| || || ||||| | ||| || |||||||| ||||| || ||||||||||||
Sbjct: 1715 ctgttggcgtaacgatcgtttgtgtcaatgccatcaaacctttgagggaactgaacatag 1656
Query: 1865 ca 1866
||
Sbjct: 1655 ca 1654
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttc 2412
|||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 1152 tttcttacagaagggaacccattttcttgcaaactcagcagtttc 1108
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 1517 gcattcatggcgccagctttcttgtggtg 1489
Score = 42.1 bits (21), Expect = 0.53
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||| ||||||||||| |||| |||||| | ||| ||||| | |||||| || ||||
Sbjct: 868 accacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacag 809
Query: 2712 a 2712
|
Sbjct: 808 a 808
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 2202 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 2152
>gb|AY139754.1| Arabidopsis thaliana AT5g17420/T10B6_80 mRNA, complete cds
Length = 3355
Score = 131 bits (66), Expect = 7e-028
Identities = 138/162 (85%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 2779 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 2720
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 2719 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 2660
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 2659 gctcgtttctccaccattcctcaatgctaactccgctccatc 2618
Score = 60.0 bits (30), Expect = 2e-006
Identities = 99/122 (81%)
Strand = Plus / Minus
Query: 1745 taaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttc 1804
||||| || ||||| || ||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1820 taaactggaccttggattccatctagacctttcatattgatatcaaagaagactgtgttt 1761
Query: 1805 cggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatag 1864
| ||| || || ||||| | ||| || |||||||| ||||| || ||||||||||||
Sbjct: 1760 ctgttggcgtaacgatcgtttgtgtcaatgccatcaaacctttgagggaactgaacatag 1701
Query: 1865 ca 1866
||
Sbjct: 1700 ca 1699
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttc 2412
|||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 1197 tttcttacagaagggaacccattttcttgcaaactcagcagtttc 1153
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 1562 gcattcatggcgccagctttcttgtggtg 1534
Score = 42.1 bits (21), Expect = 0.53
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||| ||||||||||| |||| |||||| | ||| ||||| | |||||| || ||||
Sbjct: 913 accacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacag 854
Query: 2712 a 2712
|
Sbjct: 853 a 853
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 2247 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 2197
>gb|BT004543.1| Arabidopsis thaliana AT5g17420/T10B6_80 gene, complete cds
Length = 3081
Score = 131 bits (66), Expect = 7e-028
Identities = 138/162 (85%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 2734 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 2675
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 2674 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 2615
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 2614 gctcgtttctccaccattcctcaatgctaactccgctccatc 2573
Score = 60.0 bits (30), Expect = 2e-006
Identities = 99/122 (81%)
Strand = Plus / Minus
Query: 1745 taaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttc 1804
||||| || ||||| || ||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1775 taaactggaccttggattccatctagacctttcatattgatatcaaagaagactgtgttt 1716
Query: 1805 cggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatag 1864
| ||| || || ||||| | ||| || |||||||| ||||| || ||||||||||||
Sbjct: 1715 ctgttggcgtaacgatcgtttgtgtcaatgccatcaaacctttgagggaactgaacatag 1656
Query: 1865 ca 1866
||
Sbjct: 1655 ca 1654
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttc 2412
|||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 1152 tttcttacagaagggaacccattttcttgcaaactcagcagtttc 1108
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 1517 gcattcatggcgccagctttcttgtggtg 1489
Score = 42.1 bits (21), Expect = 0.53
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||| ||||||||||| |||| |||||| | ||| ||||| | |||||| || ||||
Sbjct: 868 accacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacag 809
Query: 2712 a 2712
|
Sbjct: 808 a 808
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 2202 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 2152
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 131 bits (66), Expect = 7e-028
Identities = 138/162 (85%)
Strand = Plus / Plus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 5490181 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 5490240
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 5490241 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 5490300
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 5490301 gctcgtttctccaccattcctcaatgctaactccgctccatc 5490342
Score = 121 bits (61), Expect = 7e-025
Identities = 166/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 22908863 tttcttgcagaaaggaacccatttccttgcgaattcagcggtctcagaaagagcttcgaa 22908804
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| |||||||| || ||||| | || || || ||||| |||||
Sbjct: 22908803 agtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgacaggataatc 22908744
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
||||||||||| |||| |||||| || ||||||| || ||||| || || | ||||||
Sbjct: 22908743 aacagcaagaatagacaagacagtatttgcagtaataagcggaggctctttcaatggatc 22908684
Query: 2548 cactgtactaacaaagacatc 2568
||||||||||||||| |||||
Sbjct: 22908683 cactgtactaacaaatacatc 22908663
Score = 113 bits (57), Expect = 2e-022
Identities = 165/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||| || || |||||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 2894381 tttcttacagaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaa 2894322
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| ||||||||||||||||| | ||| |||| || || |||||
Sbjct: 2894321 agtaagcatagcagcaccatcatcagaaacataacaggcaactctgtctaccggataatc 2894262
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
|| |||||||| ||||| |||||||| | ||||| || ||||| || || | |||||
Sbjct: 2894261 aaccgcaagaatagacagaacagtgtttgctgtaataagcggaggctctttcatcggatc 2894202
Query: 2548 cactgtactaacaaagacatc 2568
||||||||| ||||| |||||
Sbjct: 2894201 cactgtactcacaaaaacatc 2894181
Score = 107 bits (54), Expect = 1e-020
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||
Sbjct: 2895157 ggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatca 2895098
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||||||||
Sbjct: 2895097 caatcgacatttagaagataag 2895076
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Plus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 1460300 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 1460359
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 1460360 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 1460419
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 1460420 cccttgaa 1460427
Score = 91.7 bits (46), Expect = 6e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||
Sbjct: 22909729 ggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatca 22909670
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||| ||||
Sbjct: 22909669 caatcgacattcagaaggtaag 22909648
Score = 91.7 bits (46), Expect = 6e-016
Identities = 166/206 (80%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 1459743 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 1459802
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 1459803 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 1459862
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 1459863 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 1459922
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 1459923 cattcgtctatgcctacgccactcca 1459948
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 1459589 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 1459648
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 1459649 gagtggtccccatgattggtatccactgttgatagcataagagactcc 1459696
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 22911296 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 22911237
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 22911236 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 22911177
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 22911176 cgtttctccaccaatc 22911161
Score = 75.8 bits (38), Expect = 4e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct: 1461678 gcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcgagaaaca 1461737
Query: 2063 ta 2064
||
Sbjct: 1461738 ta 1461739
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||||||||||||||| || || |||| |||| ||||||||||| ||||||||| ||
Sbjct: 16109002 aagtaaaactctggagctcttggctcaacattgtacttcttgcaaaacggaacccatctc 16108943
Query: 2393 cttgcaaactc 2403
|||||||||||
Sbjct: 16108942 cttgcaaactc 16108932
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataa 2065
|||||||| |||||||||||||| || | || || || ||||| |||||||||||||||
Sbjct: 2894931 ttcatggctccagccttcttgtgatggtcaaatccgggtctcttctcacgagaaacataa 2894872
Query: 2066 acaagccgtggcaactc 2082
|| ||||| ||||||||
Sbjct: 2894871 accagccgaggcaactc 2894855
Score = 63.9 bits (32), Expect = 1e-007
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 1462211 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 1462270
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 1462271 tgataacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtc 1462330
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 1462331 aacagccagaat 1462342
Score = 56.0 bits (28), Expect = 3e-005
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| || ||||| || ||||||||||| || | || |||| || ||||
Sbjct: 2896710 catcatctgctgctttagatgtaactgtgaagtttgtctcaacaccggctaaaaccttta 2896651
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||||||||| || || || ||||| ||||||||||| |
Sbjct: 2896650 ggagaccttggaagagagcaaagagatgagctgaaacacctccaatcacccaaaactgtt 2896591
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 2896590 cgtttctccaccaatc 2896575
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1832 ataccatcaaatctttgtggaaactgaacata 1863
|||||||||||||||||||| |||||||||||
Sbjct: 1461426 ataccatcaaatctttgtgggaactgaacata 1461457
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 2644 gataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcaca 2703
|||||| ||||| || ||||||||||| |||| ||| || | ||||||||| | |||||
Sbjct: 22908504 gatagggtaccatttagggaactgatcaagaacccatgaaacagcaaaccatatctcaca 22908445
Query: 2704 aataacagatacaagccacaacccataagcatctt 2738
|||||||| | ||||||||| |||| |||||||
Sbjct: 22908444 tataacagaaataagccacaaagcatatgcatctt 22908410
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 1460441 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 1460500
Query: 1288 tcagtaacagagccatatatccatccgatct 1318
|| || ||||| ||||| |||||||| ||||
Sbjct: 1460501 tctgtcacagaaccatagatccatccaatct 1460531
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatc 2568
||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 16108807 ggaggttccttgagcggatccactgtactgacaaacacatc 16108767
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttc 2412
|||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 5492271 tttcttacagaagggaacccattttcttgcaaactcagcagtttc 5492315
Score = 48.1 bits (24), Expect = 0.009
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 2615 gcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactgatc 2670
||||| || |||||||| ||||||||||| | |||| ||||||| || ||||||||
Sbjct: 1462558 gcaagcctgtcgaggtaggtttcacggttcacaggaaaccacttgggaaactgatc 1462613
Score = 48.1 bits (24), Expect = 0.009
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatcta 1769
||||| ||||| ||||| |||||||||||||| |||||||
Sbjct: 1461198 catccagttccgacatatacaggtccttgaatcccatcta 1461237
Score = 46.1 bits (23), Expect = 0.034
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2660 gggaactgatctagaagccaagacaaagcaaacca 2694
|||| |||||| |||||||||||||| ||||||||
Sbjct: 5325783 gggagctgatcaagaagccaagacaaggcaaacca 5325749
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1778 atattaatatcaaagaagacaatgtt 1803
||||||| ||||||||||||||||||
Sbjct: 23104340 atattaacatcaaagaagacaatgtt 23104315
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctc 872
||||||| ||||||||| || ||||||||||| |||||
Sbjct: 5327815 ccaatgagccaaaactgttcgtttctccaccattcctc 5327778
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 22910768 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 22910709
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 22910708 cgaagaacttgatggagacgatccgaaagattgattggagc 22910668
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 16109499 gcattcatggctccagctttcttgtggtg 16109471
Score = 42.1 bits (21), Expect = 0.53
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||| ||||||||||| |||| |||||| | ||| ||||| | |||||| || ||||
Sbjct: 5492636 accacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacag 5492695
Query: 2712 a 2712
|
Sbjct: 5492696 a 5492696
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 5491819 gcattcatggcgccagctttcttgtggtg 5491847
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgct 1130
||||||||||| |||||||| ||||||||
Sbjct: 2896205 taaccataccaaataggacaatgtctgct 2896177
Score = 40.1 bits (20), Expect = 2.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatcta 1769
||||||||||| ||||| || |||||||| || |||||||
Sbjct: 16109922 catcctgttcctacatagactggtccttggattccatcta 16109883
Score = 40.1 bits (20), Expect = 2.1
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||| || |||||||| | || ||||||||||||||| || || |||||
Sbjct: 16109279 atcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatc 16109230
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1835 ccatcaaatctttgtggaaactgaacatagca 1866
|||||||| ||||| || ||||||||||||||
Sbjct: 5491574 ccatcaaacctttgagggaactgaacatagca 5491605
Score = 40.1 bits (20), Expect = 2.1
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaa 2704
||||||||||| || ||||||||||| |||| ||| || | |||||||| | ||| ||
Sbjct: 2894104 ataggataccatttagggaactgatcaagaacccatgaaaccgcaaaccatatttcgcat 2894045
Query: 2705 ataacagatacaagccacaa 2724
|| ||||||| ||||||||
Sbjct: 2894044 atcacagatattagccacaa 2894025
Score = 38.2 bits (19), Expect = 8.2
Identities = 52/63 (82%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||||||||| ||||| | || || || ||||| ||||||||||| ||
Sbjct: 22909499 attcatagctccagccttcttatggtgatcaaatccgggtctcttctcacgagaaacgta 22909440
Query: 2065 aac 2067
|||
Sbjct: 22909439 aac 22909437
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1045 ggataaacaatggtgttgatgta 1067
||||||||||| |||||||||||
Sbjct: 16111245 ggataaacaattgtgttgatgta 16111223
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 5490793 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 5490843
Score = 38.2 bits (19), Expect = 8.2
Identities = 44/53 (83%)
Strand = Plus / Plus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||||||||| ||||| || || | ||||| |||||||| || ||||||||
Sbjct: 1461889 tggatcattcctggatggtcccttgtattatttccaggccacggtgtgccatc 1461941
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project)
Length = 33563
Score = 131 bits (66), Expect = 7e-028
Identities = 138/162 (85%)
Strand = Plus / Plus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 21010 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 21069
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 21070 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 21129
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 21130 gctcgtttctccaccattcctcaatgctaactccgctccatc 21171
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttc 2412
|||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 23100 tttcttacagaagggaacccattttcttgcaaactcagcagtttc 23144
Score = 42.1 bits (21), Expect = 0.53
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||| ||||||||||| |||| |||||| | ||| ||||| | |||||| || ||||
Sbjct: 23465 accacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacag 23524
Query: 2712 a 2712
|
Sbjct: 23525 a 23525
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 22648 gcattcatggcgccagctttcttgtggtg 22676
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1835 ccatcaaatctttgtggaaactgaacatagca 1866
|||||||| ||||| || ||||||||||||||
Sbjct: 22403 ccatcaaacctttgagggaactgaacatagca 22434
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 21622 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 21672
>ref|NM_121748.2| Arabidopsis thaliana IRX3 (IRREGULAR XYLEM 3); cellulose synthase
AT5G17420 (IRX3) mRNA, complete cds
Length = 3693
Score = 131 bits (66), Expect = 7e-028
Identities = 138/162 (85%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 2779 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 2720
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 2719 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 2660
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 2659 gctcgtttctccaccattcctcaatgctaactccgctccatc 2618
Score = 60.0 bits (30), Expect = 2e-006
Identities = 99/122 (81%)
Strand = Plus / Minus
Query: 1745 taaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttc 1804
||||| || ||||| || ||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1820 taaactggaccttggattccatctagacctttcatattgatatcaaagaagactgtgttt 1761
Query: 1805 cggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatag 1864
| ||| || || ||||| | ||| || |||||||| ||||| || ||||||||||||
Sbjct: 1760 ctgttggcgtaacgatcgtttgtgtcaatgccatcaaacctttgagggaactgaacatag 1701
Query: 1865 ca 1866
||
Sbjct: 1700 ca 1699
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttc 2412
|||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 1197 tttcttacagaagggaacccattttcttgcaaactcagcagtttc 1153
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 1562 gcattcatggcgccagctttcttgtggtg 1534
Score = 42.1 bits (21), Expect = 0.53
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||| ||||||||||| |||| |||||| | ||| ||||| | |||||| || ||||
Sbjct: 913 accacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacag 854
Query: 2712 a 2712
|
Sbjct: 853 a 853
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 2247 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 2197
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 131 bits (66), Expect = 7e-028
Identities = 138/162 (85%)
Strand = Plus / Plus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 5737208 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 5737267
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 5737268 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 5737327
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 5737328 gctcgtttctccaccattcctcaatgctaactccgctccatc 5737369
Score = 121 bits (61), Expect = 7e-025
Identities = 166/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 25900776 tttcttgcagaaaggaacccatttccttgcgaattcagcggtctcagaaagagcttcgaa 25900717
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| |||||||| || ||||| | || || || ||||| |||||
Sbjct: 25900716 agtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgacaggataatc 25900657
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
||||||||||| |||| |||||| || ||||||| || ||||| || || | ||||||
Sbjct: 25900656 aacagcaagaatagacaagacagtatttgcagtaataagcggaggctctttcaatggatc 25900597
Query: 2548 cactgtactaacaaagacatc 2568
||||||||||||||| |||||
Sbjct: 25900596 cactgtactaacaaatacatc 25900576
Score = 113 bits (57), Expect = 2e-022
Identities = 165/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||| || || |||||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 3075296 tttcttacagaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaa 3075237
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| ||||||||||||||||| | ||| |||| || || |||||
Sbjct: 3075236 agtaagcatagcagcaccatcatcagaaacataacaggcaactctgtctaccggataatc 3075177
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
|| |||||||| ||||| |||||||| | ||||| || ||||| || || | |||||
Sbjct: 3075176 aaccgcaagaatagacagaacagtgtttgctgtaataagcggaggctctttcatcggatc 3075117
Query: 2548 cactgtactaacaaagacatc 2568
||||||||| ||||| |||||
Sbjct: 3075116 cactgtactcacaaaaacatc 3075096
Score = 107 bits (54), Expect = 1e-020
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||
Sbjct: 3076072 ggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatca 3076013
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||||||||
Sbjct: 3076012 caatcgacatttagaagataag 3075991
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Plus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 1531263 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 1531322
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 1531323 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 1531382
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 1531383 cccttgaa 1531390
Score = 91.7 bits (46), Expect = 6e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||
Sbjct: 25901642 ggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatca 25901583
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||| ||||
Sbjct: 25901582 caatcgacattcagaaggtaag 25901561
Score = 91.7 bits (46), Expect = 6e-016
Identities = 166/206 (80%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 1530706 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 1530765
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 1530766 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 1530825
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 1530826 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 1530885
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 1530886 cattcgtctatgcctacgccactcca 1530911
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 1530552 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 1530611
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 1530612 gagtggtccccatgattggtatccactgttgatagcataagagactcc 1530659
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 25903209 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 25903150
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 25903149 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 25903090
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 25903089 cgtttctccaccaatc 25903074
Score = 75.8 bits (38), Expect = 4e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct: 1532641 gcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcgagaaaca 1532700
Query: 2063 ta 2064
||
Sbjct: 1532701 ta 1532702
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||||||||||||||| || || |||| |||| ||||||||||| ||||||||| ||
Sbjct: 17733508 aagtaaaactctggagctcttggctcaacattgtacttcttgcaaaacggaacccatctc 17733449
Query: 2393 cttgcaaactc 2403
|||||||||||
Sbjct: 17733448 cttgcaaactc 17733438
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataa 2065
|||||||| |||||||||||||| || | || || || ||||| |||||||||||||||
Sbjct: 3075846 ttcatggctccagccttcttgtgatggtcaaatccgggtctcttctcacgagaaacataa 3075787
Query: 2066 acaagccgtggcaactc 2082
|| ||||| ||||||||
Sbjct: 3075786 accagccgaggcaactc 3075770
Score = 63.9 bits (32), Expect = 1e-007
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 1533174 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 1533233
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 1533234 tgataacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtc 1533293
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 1533294 aacagccagaat 1533305
Score = 56.0 bits (28), Expect = 3e-005
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| || ||||| || ||||||||||| || | || |||| || ||||
Sbjct: 3077625 catcatctgctgctttagatgtaactgtgaagtttgtctcaacaccggctaaaaccttta 3077566
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||||||||| || || || ||||| ||||||||||| |
Sbjct: 3077565 ggagaccttggaagagagcaaagagatgagctgaaacacctccaatcacccaaaactgtt 3077506
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 3077505 cgtttctccaccaatc 3077490
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1832 ataccatcaaatctttgtggaaactgaacata 1863
|||||||||||||||||||| |||||||||||
Sbjct: 1532389 ataccatcaaatctttgtgggaactgaacata 1532420
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 2644 gataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcaca 2703
|||||| ||||| || ||||||||||| |||| ||| || | ||||||||| | |||||
Sbjct: 25900417 gatagggtaccatttagggaactgatcaagaacccatgaaacagcaaaccatatctcaca 25900358
Query: 2704 aataacagatacaagccacaacccataagcatctt 2738
|||||||| | ||||||||| |||| |||||||
Sbjct: 25900357 tataacagaaataagccacaaagcatatgcatctt 25900323
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 1531404 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 1531463
Query: 1288 tcagtaacagagccatatatccatccgatct 1318
|| || ||||| ||||| |||||||| ||||
Sbjct: 1531464 tctgtcacagaaccatagatccatccaatct 1531494
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatc 2568
||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 17733313 ggaggttccttgagcggatccactgtactgacaaacacatc 17733273
Score = 50.1 bits (25), Expect = 0.002
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttc 2412
|||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 5739298 tttcttacagaagggaacccattttcttgcaaactcagcagtttc 5739342
Score = 48.1 bits (24), Expect = 0.009
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 2615 gcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactgatc 2670
||||| || |||||||| ||||||||||| | |||| ||||||| || ||||||||
Sbjct: 1533521 gcaagcctgtcgaggtaggtttcacggttcacaggaaaccacttgggaaactgatc 1533576
Score = 48.1 bits (24), Expect = 0.009
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatcta 1769
||||| ||||| ||||| |||||||||||||| |||||||
Sbjct: 1532161 catccagttccgacatatacaggtccttgaatcccatcta 1532200
Score = 46.1 bits (23), Expect = 0.034
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2660 gggaactgatctagaagccaagacaaagcaaacca 2694
|||| |||||| |||||||||||||| ||||||||
Sbjct: 5562810 gggagctgatcaagaagccaagacaaggcaaacca 5562776
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1778 atattaatatcaaagaagacaatgtt 1803
||||||| ||||||||||||||||||
Sbjct: 26136253 atattaacatcaaagaagacaatgtt 26136228
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctc 872
||||||| ||||||||| || ||||||||||| |||||
Sbjct: 5564842 ccaatgagccaaaactgttcgtttctccaccattcctc 5564805
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 25902681 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 25902622
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 25902621 cgaagaacttgatggagacgatccgaaagattgattggagc 25902581
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 17734005 gcattcatggctccagctttcttgtggtg 17733977
Score = 42.1 bits (21), Expect = 0.53
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||| ||||||||||| |||| |||||| | ||| ||||| | |||||| || ||||
Sbjct: 5739663 accacttggggaactgatcaagaatccaagagacagcgaaccagatttcacagatcacag 5739722
Query: 2712 a 2712
|
Sbjct: 5739723 a 5739723
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 5738846 gcattcatggcgccagctttcttgtggtg 5738874
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgct 1130
||||||||||| |||||||| ||||||||
Sbjct: 3077120 taaccataccaaataggacaatgtctgct 3077092
Score = 40.1 bits (20), Expect = 2.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatcta 1769
||||||||||| ||||| || |||||||| || |||||||
Sbjct: 17734428 catcctgttcctacatagactggtccttggattccatcta 17734389
Score = 40.1 bits (20), Expect = 2.1
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||| || |||||||| | || ||||||||||||||| || || |||||
Sbjct: 17733785 atcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatc 17733736
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1835 ccatcaaatctttgtggaaactgaacatagca 1866
|||||||| ||||| || ||||||||||||||
Sbjct: 5738601 ccatcaaacctttgagggaactgaacatagca 5738632
Score = 40.1 bits (20), Expect = 2.1
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaa 2704
||||||||||| || ||||||||||| |||| ||| || | |||||||| | ||| ||
Sbjct: 3075019 ataggataccatttagggaactgatcaagaacccatgaaaccgcaaaccatatttcgcat 3074960
Query: 2705 ataacagatacaagccacaa 2724
|| ||||||| ||||||||
Sbjct: 3074959 atcacagatattagccacaa 3074940
Score = 38.2 bits (19), Expect = 8.2
Identities = 52/63 (82%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||||||||| ||||| | || || || ||||| ||||||||||| ||
Sbjct: 25901412 attcatagctccagccttcttatggtgatcaaatccgggtctcttctcacgagaaacgta 25901353
Query: 2065 aac 2067
|||
Sbjct: 25901352 aac 25901350
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2303 ttgtcctttaggtaatctatctt 2325
|||||||||| ||||||||||||
Sbjct: 18663562 ttgtcctttaagtaatctatctt 18663584
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1045 ggataaacaatggtgttgatgta 1067
||||||||||| |||||||||||
Sbjct: 17735751 ggataaacaattgtgttgatgta 17735729
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 5737820 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 5737870
Score = 38.2 bits (19), Expect = 8.2
Identities = 44/53 (83%)
Strand = Plus / Plus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||||||||| ||||| || || | ||||| |||||||| || ||||||||
Sbjct: 1532852 tggatcattcctggatggtcccttgtattatttccaggccacggtgtgccatc 1532904
>gb|BE530485.1|BE530485 M77N01STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600040007R1 5', mRNA sequence
Length = 256
Score = 129 bits (65), Expect = 3e-027
Identities = 204/251 (81%)
Strand = Plus / Minus
Query: 2015 ccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataaacaagccgt 2074
|||||||| |||||||| || || || |||| |||||||||||||||||| | || |
Sbjct: 251 ccagcctttttgtggtgttgaaatccaggccgcttttcacgagaaacatagatgagtcta 192
Query: 2075 ggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatacttggatcatt 2134
|||| |||||| ||||| || || || || ||||| ||||| ||||| || || ||||||
Sbjct: 191 ggcagctcatttccatcggtatccagacccccactatggcctaagaacacctgtatcatt 132
Query: 2135 ccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtccagccc 2194
|| ||||||||||||| ||| || |||||||| ||||| ||||| ||| ||||||||
Sbjct: 131 ccaggatgatctctagtgttgttaccaggccagggagtaccatcctgcattgtccagcct 72
Query: 2195 tcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaactcttca 2254
|| ||||| ||||| || ||||| |||||||| |||| |||| ||||| |||||||||
Sbjct: 71 tcttcagggattttctgtgctttggcaacaagagcatttatcctcactttaaactcttca 12
Query: 2255 tactccctctt 2265
||||| |||||
Sbjct: 11 tactctctctt 1
>gb|AV550172.1|AV550172 AV550172 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109c04R 5', mRNA sequence
Length = 506
Score = 129 bits (65), Expect = 3e-027
Identities = 227/281 (80%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 286 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 227
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 226 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 167
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccc 1209
|| | |||||| || | |||||||| | ||||||||||||||| ||||| ||||| |||
Sbjct: 166 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcagatccc 107
Query: 1210 ttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttg 1269
||||| ||| || | || |||||||||| ||||||||||| | ||||||||||||
Sbjct: 106 ttgaacgcagggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttg 47
Query: 1270 aaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|| ||||| | ||||||||| || || || ||||| |||||
Sbjct: 46 aacccagtaagaatatcttccgtcacggaaccatagatcca 6
Score = 87.7 bits (44), Expect = 1e-014
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 810 agcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatc 869
|||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||||
Sbjct: 506 agcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaatc 447
Query: 870 ctcaatgccaacaccactccatcgaagctcca 901
|||||||| ||||| ||||||| |||||||
Sbjct: 446 ctcaatgctcacaccgctccatctcagctcca 415
>gb|CF651830.1|CF651830 17-L020525-066-003-B05-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001B053Q 5-PRIME, mRNA sequence
Length = 821
Score = 125 bits (63), Expect = 5e-026
Identities = 189/231 (81%)
Strand = Plus / Minus
Query: 1101 gtaaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||||||||||||||||| ||||||||||| ||||| || | || || | ||||||
Sbjct: 821 gtaaccataccagataggacaatgtctgctaagaagaatctcgatagatcccaaagccca 762
Query: 1161 gcgtaacacttggttgagacgatcagaaagattaattggagcagaacccttgaagcaagg 1220
|| | |||||||| | ||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 761 tcgaagaacttggttcaaacgatcagaaagattgattggtgcagatcccttgaacgcagg 702
Query: 1221 ccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaa 1280
|| | || |||||||||| ||||||||||| | |||||||||||||| ||||| |
Sbjct: 701 gcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttgaacccagtaag 642
Query: 1281 aatatcttcagtaacagagccatatatccatccgatctctttcccccattc 1331
||||||||| || || || ||||| ||||| || |||||||| ||||||||
Sbjct: 641 aatatcttccgtcacggaaccatagatccaaccaatctctttgccccattc 591
Score = 40.1 bits (20), Expect = 2.1
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaag-gcctgcctattgaaacagcatcctgtt 1738
|||| ||||| ||||||||||| ||||| | | ||||||||||| ||||| || || ||
Sbjct: 249 cttccgtcaaaacaggatcatacccatataggagcctgcctattaaaacaacaaccagta 190
Query: 1739 cccacata 1746
||||||||
Sbjct: 189 cccacata 182
>ref|NM_121747.2| Arabidopsis thaliana unknown protein AT5G17410 transcript variant
AT5G17410.1 mRNA, complete cds
Length = 3027
Score = 125 bits (63), Expect = 5e-026
Identities = 126/147 (85%)
Strand = Plus / Plus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 2869 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 2928
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 2929 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 2988
Query: 851 gctcatttctccaccaatcctcaatgc 877
|||| ||||||||||| ||||||||||
Sbjct: 2989 gctcgtttctccaccattcctcaatgc 3015
>ref|NM_180507.1| Arabidopsis thaliana unknown protein AT5G17410 transcript variant
AT5G17410.2 mRNA, complete cds
Length = 3030
Score = 125 bits (63), Expect = 5e-026
Identities = 126/147 (85%)
Strand = Plus / Plus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 2872 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 2931
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 2932 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 2991
Query: 851 gctcatttctccaccaatcctcaatgc 877
|||| ||||||||||| ||||||||||
Sbjct: 2992 gctcgtttctccaccattcctcaatgc 3018
>dbj|AK220815.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit,
partial cds, clone: RAFL22-31-O12
Length = 930
Score = 123 bits (62), Expect = 2e-025
Identities = 137/162 (84%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || |||| || | ||
Sbjct: 409 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgttaagattt 350
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||||||||||| || ||||||||||| || ||| | || ||||||||||| || |
Sbjct: 349 tgaggagaccttggacaaccgcaaagagatgagctgagattcctccaatgacccagaatt 290
Query: 851 gctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||| ||||||||||| |||||||||| ||| || |||||||
Sbjct: 289 gctcgtttctccaccattcctcaatgctaactccgctccatc 248
>gb|CC794586.1|CC794586 SALK_052533.32.20.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_052533.32.20.x,
DNA sequence
Length = 448
Score = 121 bits (61), Expect = 7e-025
Identities = 166/201 (82%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| ||||| || ||||| |||||| ||||||| || |||||||| | |||||||||
Sbjct: 242 cttcattgcccgtctctctttgacaaaaaaaggttggatcttgtccttcaagtaatctat 301
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| | | ||| || ||||| |||| ||||||||||||||| ||||||||| || ||
Sbjct: 302 cttctgggaaaaatagaactcacgagctctaggttcaatgttgaatttcttgcagaaagg 361
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
||||||||| ||| ||||| || |||||||| || |||||| |||| | |||||||||
Sbjct: 362 tacccatttctttgagaactcagccgtttcagaaagggcttcagaagttagcatagctga 421
Query: 2443 accgtcatcagaaacataaca 2463
||||||||| ||||| |||||
Sbjct: 422 accgtcatccgaaacgtaaca 442
>gb|AF062485.1|AF062485 Arabidopsis thaliana cellulose synthase mRNA, partial cds
Length = 3444
Score = 121 bits (61), Expect = 7e-025
Identities = 166/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 1258 tttcttgcagaaaggaacccatttccttgcgaattcagcggtctcagaaagagcttcgaa 1199
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| |||||||| || ||||| | || || || ||||| |||||
Sbjct: 1198 agtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgacaggataatc 1139
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
||||||||||| |||| |||||| || ||||||| || ||||| || || | ||||||
Sbjct: 1138 aacagcaagaatagacaagacagtatttgcagtaataagcggaggctctttcaatggatc 1079
Query: 2548 cactgtactaacaaagacatc 2568
||||||||||||||| |||||
Sbjct: 1078 cactgtactaacaaatacatc 1058
Score = 91.7 bits (46), Expect = 6e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||
Sbjct: 1740 ggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatca 1681
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||| ||||
Sbjct: 1680 caatcgacattcagaaggtaag 1659
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 2897 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 2838
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 2837 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 2778
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 2777 cgtttctccaccaatc 2762
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 2644 gataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcaca 2703
|||||| ||||| || ||||||||||| |||| ||| || | ||||||||| | |||||
Sbjct: 982 gatagggtaccatttagggaactgatcaagaacccatgaaacagcaaaccatatctcaca 923
Query: 2704 aataacagatacaagccacaacccataagcatctt 2738
|||||||| | ||||||||| |||| |||||||
Sbjct: 922 tataacagaaataagccacaaagcatatgcatctt 888
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 2529 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 2470
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 2469 cgaagaacttgatggagacgatccgaaagattgattggagc 2429
>emb|AX507835.1| Sequence 2530 from Patent WO0216655
Length = 3255
Score = 121 bits (61), Expect = 7e-025
Identities = 166/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 1266 tttcttgcagaaaggaacccatttccttgcgaattcagcggtctcagaaagagcttcgaa 1207
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| |||||||| || ||||| | || || || ||||| |||||
Sbjct: 1206 agtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgacaggataatc 1147
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
||||||||||| |||| |||||| || ||||||| || ||||| || || | ||||||
Sbjct: 1146 aacagcaagaatagacaagacagtatttgcagtaataagcggaggctctttcaatggatc 1087
Query: 2548 cactgtactaacaaagacatc 2568
||||||||||||||| |||||
Sbjct: 1086 cactgtactaacaaatacatc 1066
Score = 91.7 bits (46), Expect = 6e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||
Sbjct: 1748 ggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatca 1689
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||| ||||
Sbjct: 1688 caatcgacattcagaaggtaag 1667
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 2905 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 2846
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 2845 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 2786
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 2785 cgtttctccaccaatc 2770
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 2644 gataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcaca 2703
|||||| ||||| || ||||||||||| |||| ||| || | ||||||||| | |||||
Sbjct: 990 gatagggtaccatttagggaactgatcaagaacccatgaaacagcaaaccatatctcaca 931
Query: 2704 aataacagatacaagccacaacccataagcatctt 2738
|||||||| | ||||||||| |||| |||||||
Sbjct: 930 tataacagaaataagccacaaagcatatgcatctt 896
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 2537 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 2478
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 2477 cgaagaacttgatggagacgatccgaaagattgattggagc 2437
>emb|BX832166.1|CNS0A1ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH56ZA06 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3911
Score = 121 bits (61), Expect = 7e-025
Identities = 166/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 1693 tttcttgcagaaaggaacccatttccttgcgaattcagcggtctcagaaagagcttcgaa 1634
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| |||||||| || ||||| | || || || ||||| |||||
Sbjct: 1633 agtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgacaggataatc 1574
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
||||||||||| |||| |||||| || ||||||| || ||||| || || | ||||||
Sbjct: 1573 aacagcaagaatagacaagacagtatttgcagtaataagcggaggctctttcaatggatc 1514
Query: 2548 cactgtactaacaaagacatc 2568
||||||||||||||| |||||
Sbjct: 1513 cactgtactaacaaatacatc 1493
Score = 91.7 bits (46), Expect = 6e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||
Sbjct: 2176 ggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatca 2117
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||| ||||
Sbjct: 2116 caatcgacattcagaaggtaag 2095
Score = 65.9 bits (33), Expect = 4e-008
Identities = 112/137 (81%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 3334 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 3275
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatga-cccaaaactgc 852
|||||||||||| | |||||| ||||| ||||| || ||||||| ||||||||||
Sbjct: 3274 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgaccccaaaactgt 3215
Query: 853 tcatttctccaccaatc 869
|| ||||||||||||||
Sbjct: 3214 tcgtttctccaccaatc 3198
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 2644 gataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcaca 2703
|||||| ||||| || ||||||||||| |||| ||| || | ||||||||| | |||||
Sbjct: 1417 gatagggtaccatttagggaactgatcaagaacccatgaaacagcaaaccatatctcaca 1358
Query: 2704 aataacagatacaagccacaacccataagcatctt 2738
|||||||| | ||||||||| |||| |||||||
Sbjct: 1357 tataacagaaataagccacaaagcatatgcatctt 1323
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 2965 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 2906
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 2905 cgaagaacttgatggagacgatccgaaagattgattggagc 2865
>dbj|AB025637.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVP7
Length = 39645
Score = 121 bits (61), Expect = 7e-025
Identities = 166/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 20530 tttcttgcagaaaggaacccatttccttgcgaattcagcggtctcagaaagagcttcgaa 20471
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| |||||||| || ||||| | || || || ||||| |||||
Sbjct: 20470 agtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgacaggataatc 20411
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
||||||||||| |||| |||||| || ||||||| || ||||| || || | ||||||
Sbjct: 20410 aacagcaagaatagacaagacagtatttgcagtaataagcggaggctctttcaatggatc 20351
Query: 2548 cactgtactaacaaagacatc 2568
||||||||||||||| |||||
Sbjct: 20350 cactgtactaacaaatacatc 20330
Score = 91.7 bits (46), Expect = 6e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||
Sbjct: 21396 ggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatca 21337
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||| ||||
Sbjct: 21336 caatcgacattcagaaggtaag 21315
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 22963 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 22904
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 22903 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 22844
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 22843 cgtttctccaccaatc 22828
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 2644 gataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcaca 2703
|||||| ||||| || ||||||||||| |||| ||| || | ||||||||| | |||||
Sbjct: 20171 gatagggtaccatttagggaactgatcaagaacccatgaaacagcaaaccatatctcaca 20112
Query: 2704 aataacagatacaagccacaacccataagcatctt 2738
|||||||| | ||||||||| |||| |||||||
Sbjct: 20111 tataacagaaataagccacaaagcatatgcatctt 20077
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 22435 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 22376
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 22375 cgaagaacttgatggagacgatccgaaagattgattggagc 22335
Score = 38.2 bits (19), Expect = 8.2
Identities = 52/63 (82%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||||||||| ||||| | || || || ||||| ||||||||||| ||
Sbjct: 21166 attcatagctccagccttcttatggtgatcaaatccgggtctcttctcacgagaaacgta 21107
Query: 2065 aac 2067
|||
Sbjct: 21106 aac 21104
>ref|NM_125870.2| Arabidopsis thaliana CESA6 (CELLULASE SYNTHASE 6); transferase,
transferring glycosyl groups AT5G64740 (CESA6) mRNA,
complete cds
Length = 4105
Score = 121 bits (61), Expect = 7e-025
Identities = 166/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 1755 tttcttgcagaaaggaacccatttccttgcgaattcagcggtctcagaaagagcttcgaa 1696
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| |||||||| || ||||| | || || || ||||| |||||
Sbjct: 1695 agtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgacaggataatc 1636
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
||||||||||| |||| |||||| || ||||||| || ||||| || || | ||||||
Sbjct: 1635 aacagcaagaatagacaagacagtatttgcagtaataagcggaggctctttcaatggatc 1576
Query: 2548 cactgtactaacaaagacatc 2568
||||||||||||||| |||||
Sbjct: 1575 cactgtactaacaaatacatc 1555
Score = 91.7 bits (46), Expect = 6e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||
Sbjct: 2237 ggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatca 2178
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||| ||||
Sbjct: 2177 caatcgacattcagaaggtaag 2156
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 3394 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 3335
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 3334 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 3275
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 3274 cgtttctccaccaatc 3259
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 2644 gataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcaca 2703
|||||| ||||| || ||||||||||| |||| ||| || | ||||||||| | |||||
Sbjct: 1479 gatagggtaccatttagggaactgatcaagaacccatgaaacagcaaaccatatctcaca 1420
Query: 2704 aataacagatacaagccacaacccataagcatctt 2738
|||||||| | ||||||||| |||| |||||||
Sbjct: 1419 tataacagaaataagccacaaagcatatgcatctt 1385
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 3026 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 2967
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 2966 cgaagaacttgatggagacgatccgaaagattgattggagc 2926
>gb|CB261308.1|CB261308 08-E9409-012-002-P13-t7r MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769P132Q 5-PRIME, mRNA sequence
Length = 593
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 522 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 463
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 462 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 403
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 402 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 343
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 342 tcctcaatgctcacaccgctccatctcagctcca 309
Score = 95.6 bits (48), Expect = 4e-017
Identities = 144/176 (81%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 180 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 121
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaa 1149
| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || | ||
Sbjct: 120 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagat 61
Query: 1150 ccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcaga 1205
|| | |||||| || | |||||||| | ||||||||||||||| ||||| |||||
Sbjct: 60 cccaaagcccatcgaagaacttggttcaaacgatcagaaagattgattggtgcaga 5
>gb|CD534481.1|CD534481 39I11 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 453
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 431 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 372
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 371 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 312
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 311 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 252
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 251 tcctcaatgctcacaccgctccatctcagctcca 218
Score = 58.0 bits (29), Expect = 9e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 89 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 30
Query: 1090 agccttccattgtaaccataccagatagg 1118
| |||||||| ||||||||||||||||||
Sbjct: 29 aaccttccatggtaaccataccagatagg 1
>gb|CK121679.1|CK121679 202d06.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011D06202
5-PRIME, mRNA sequence
Length = 799
Score = 115 bits (58), Expect = 4e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 428 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 369
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 368 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 309
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 308 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 249
Query: 868 tcctcaatgccaacaccactccatcgaagctcca 901
|||||||||| ||||| ||||||| |||||||
Sbjct: 248 tcctcaatgctcacaccgctccatctcagctcca 215
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 668 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 609
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 608 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 549
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 548 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 489
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 488 taagagacaccagccac 472
Score = 52.0 bits (26), Expect = 5e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 86 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 27
Query: 1090 agccttccattgtaaccataccagat 1115
| |||||||| |||||||||||||||
Sbjct: 26 aaccttccatggtaaccataccagat 1
>gb|AV442267.1|AV442267 AV442267 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ12d09_r 5', mRNA
sequence
Length = 433
Score = 113 bits (57), Expect = 2e-022
Identities = 168/205 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 209 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 150
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 149 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 90
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 89 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 30
Query: 868 tcctcaatgccaacaccactccatc 892
|||||||||| ||||| |||||||
Sbjct: 29 tcctcaatgctcacaccgctccatc 5
Score = 85.7 bits (43), Expect = 4e-014
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 466 atggaagcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttcccc 525
||||| || ||||| || ||||| |||||||||||||| ||||| ||||| || | |||
Sbjct: 431 atggaggcgagaagaaccgaccagacaatgacgatggttggtgttcggttttgtcttccc 372
Query: 526 atgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttc 585
| ||||| |||| |||||||||||| ||| || ||||| | || ||||| ||||||
Sbjct: 371 aacagacctttcaagaaagggtagagatgggcaataacccataaggcgaagaagagcttc 312
Query: 586 ccgaatagtggaccccatgattggtagccactgttgatagcatacgacactccagccac 644
||||| || |||||||| || |||||||||||||| | |||||| || || ||||||||
Sbjct: 311 ccgaaaagcggaccccacgactggtagccactgtttacagcataagagacaccagccac 253
>dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH9
Length = 82390
Score = 113 bits (57), Expect = 2e-022
Identities = 165/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||| || || |||||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 28059 tttcttacagaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaa 28000
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| ||||||||||||||||| | ||| |||| || || |||||
Sbjct: 27999 agtaagcatagcagcaccatcatcagaaacataacaggcaactctgtctaccggataatc 27940
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
|| |||||||| ||||| |||||||| | ||||| || ||||| || || | |||||
Sbjct: 27939 aaccgcaagaatagacagaacagtgtttgctgtaataagcggaggctctttcatcggatc 27880
Query: 2548 cactgtactaacaaagacatc 2568
||||||||| ||||| |||||
Sbjct: 27879 cactgtactcacaaaaacatc 27859
Score = 107 bits (54), Expect = 1e-020
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||
Sbjct: 28835 ggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatca 28776
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||||||||
Sbjct: 28775 caatcgacatttagaagataag 28754
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataa 2065
|||||||| |||||||||||||| || | || || || ||||| |||||||||||||||
Sbjct: 28609 ttcatggctccagccttcttgtgatggtcaaatccgggtctcttctcacgagaaacataa 28550
Query: 2066 acaagccgtggcaactc 2082
|| ||||| ||||||||
Sbjct: 28549 accagccgaggcaactc 28533
Score = 56.0 bits (28), Expect = 3e-005
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| || ||||| || ||||||||||| || | || |||| || ||||
Sbjct: 30388 catcatctgctgctttagatgtaactgtgaagtttgtctcaacaccggctaaaaccttta 30329
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||||||||| || || || ||||| ||||||||||| |
Sbjct: 30328 ggagaccttggaagagagcaaagagatgagctgaaacacctccaatcacccaaaactgtt 30269
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 30268 cgtttctccaccaatc 30253
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgct 1130
||||||||||| |||||||| ||||||||
Sbjct: 29883 taaccataccaaataggacaatgtctgct 29855
Score = 40.1 bits (20), Expect = 2.1
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaa 2704
||||||||||| || ||||||||||| |||| ||| || | |||||||| | ||| ||
Sbjct: 27782 ataggataccatttagggaactgatcaagaacccatgaaaccgcaaaccatatttcgcat 27723
Query: 2705 ataacagatacaagccacaa 2724
|| ||||||| ||||||||
Sbjct: 27722 atcacagatattagccacaa 27703
>ref|NM_121024.1| Arabidopsis thaliana CESA5 (CELLULASE SYNTHASE 5); transferase,
transferring glycosyl groups AT5G09870 (CESA5) mRNA,
complete cds
Length = 3210
Score = 113 bits (57), Expect = 2e-022
Identities = 165/201 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||| || || |||||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 1230 tttcttacagaaaggaacccatttcctagcaaactctgctgtttctgaaagggcttcaaa 1171
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| ||||||||||||||||| | ||| |||| || || |||||
Sbjct: 1170 agtaagcatagcagcaccatcatcagaaacataacaggcaactctgtctaccggataatc 1111
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
|| |||||||| ||||| |||||||| | ||||| || ||||| || || | |||||
Sbjct: 1110 aaccgcaagaatagacagaacagtgtttgctgtaataagcggaggctctttcatcggatc 1051
Query: 2548 cactgtactaacaaagacatc 2568
||||||||| ||||| |||||
Sbjct: 1050 cactgtactcacaaaaacatc 1030
Score = 107 bits (54), Expect = 1e-020
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||
Sbjct: 1712 ggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatca 1653
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||||||||
Sbjct: 1652 caatcgacatttagaagataag 1631
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataa 2065
|||||||| |||||||||||||| || | || || || ||||| |||||||||||||||
Sbjct: 1592 ttcatggctccagccttcttgtgatggtcaaatccgggtctcttctcacgagaaacataa 1533
Query: 2066 acaagccgtggcaactc 2082
|| ||||| ||||||||
Sbjct: 1532 accagccgaggcaactc 1516
Score = 56.0 bits (28), Expect = 3e-005
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| || ||||| || ||||||||||| || | || |||| || ||||
Sbjct: 2860 catcatctgctgctttagatgtaactgtgaagtttgtctcaacaccggctaaaaccttta 2801
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||||||||| || || || ||||| ||||||||||| |
Sbjct: 2800 ggagaccttggaagagagcaaagagatgagctgaaacacctccaatcacccaaaactgtt 2741
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 2740 cgtttctccaccaatc 2725
Score = 50.1 bits (25), Expect = 0.002
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||| || || ||||| || || ||||| || |||||
Sbjct: 2334 atgcatcttgaaacccgtaaggatatcctcggtgacagaaccgtagatccacccaatctc 2275
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 2274 ttttccccattcggttttatc 2254
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgct 1130
||||||||||| |||||||| ||||||||
Sbjct: 2492 taaccataccaaataggacaatgtctgct 2464
Score = 40.1 bits (20), Expect = 2.1
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaa 2704
||||||||||| || ||||||||||| |||| ||| || | |||||||| | ||| ||
Sbjct: 953 ataggataccatttagggaactgatcaagaacccatgaaaccgcaaaccatatttcgcat 894
Query: 2705 ataacagatacaagccacaa 2724
|| ||||||| ||||||||
Sbjct: 893 atcacagatattagccacaa 874
>gb|N96792.1|N96792 21978 Lambda-PRL1 Arabidopsis thaliana cDNA clone G9E2T7, mRNA
sequence
Length = 410
Score = 111 bits (56), Expect = 7e-022
Identities = 145/176 (82%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
|||||||||||||||||||| ||| ||| ||| || ||| |||| |||| |||| ||||
Sbjct: 212 tccatcatgaaacacatagcttctttaatagccttactgttattaaagtnatgatnacaa 153
Query: 1949 tccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattc 2008
||||| || | |||||| || ||||| || || ||||| ||||| || ||||| ||||||
Sbjct: 152 tccacgttnaaaagatatgctccattggtaagaacagcagatacacggatcaatgcattc 93
Query: 2009 atggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|| || |||||||| |||||||| || || || |||| |||||||| |||||||||
Sbjct: 92 atagctccagcctttttgtggtgttgaaatccaggccgcttttcacnagaaacata 37
>gb|AA650885.1|AA650885 30999 Lambda-PRL2 Arabidopsis thaliana cDNA clone 289G5T7, mRNA
sequence
Length = 333
Score = 107 bits (54), Expect = 1e-020
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 159 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 100
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | ||| ||||||| || |||||| |||| || ||| | || ||||||||| | || |
Sbjct: 99 tgaggagnccttggacaaccgcaaagngatgagctgagattcctccaatgaccnagaatt 40
Query: 851 gctcatttctccaccaatcctcaatgc 877
|||| ||||||||||| ||||||||||
Sbjct: 39 gctcgtttctccaccattcctcaatgc 13
>gb|N96707.1|N96707 21510 CD4-15 Arabidopsis thaliana cDNA clone G3A4T7, mRNA sequence
Length = 538
Score = 107 bits (54), Expect = 1e-020
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||
Sbjct: 345 ggatccatcatgaaacacattgcttctctaagagctttgctattattgatgtagtgatca 286
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||||||||
Sbjct: 285 caatcgacatttagaagataag 264
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataa 2065
|||||||| |||||||||||||| || | || || || ||||| |||||||||||||||
Sbjct: 225 ttcatggctccagccttcttgtgatggtcaaatccgggtctcttctcacgagaaacataa 166
Query: 2066 acaagccgtggcaactc 2082
|| ||||| ||||||||
Sbjct: 165 accagccgaggcaactc 149
>gb|AV823575.1|AV823575 AV823575 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-21-E11 5', mRNA
sequence
Length = 582
Score = 107 bits (54), Expect = 1e-020
Identities = 166/202 (82%), Gaps = 1/202 (0%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||||||||| || || ||||| ||||| |||||||| ||
Sbjct: 234 tttcttgcagaaaggaacccatttccttgcgaattcagcggtctcagaaagagcttcgaa 175
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||| | |||||| | ||| |||||||| || ||||| | || || || ||||| |||||
Sbjct: 174 agtaagcatagcagcaccatcatcagatacgtaacaagcaaccttatcgacaggataatc 115
Query: 2488 cacagcaagaatggacaggac-agtgttgccagtaattagaggaggttccttaagtggat 2546
||||||||||| |||| ||| ||| || ||||||| || ||||| || || | |||||
Sbjct: 114 aacagcaagaatagacaagactagtatttgcagtaataagcggaggctctttcaatggat 55
Query: 2547 ccactgtactaacaaagacatc 2568
|||||||||||||||| |||||
Sbjct: 54 ccactgtactaacaaatacatc 33
>emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS32ZA11 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 832
Score = 107 bits (54), Expect = 1e-020
Identities = 156/190 (82%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||| | || || || |||||||| ||||| || || || ||
Sbjct: 192 agaagagctgtccatttgaagatgtagagttctgcaaaatccccatcttcgtctgtggct 133
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
|| ||||| || |||||||| |||||||| || || || || || | |||||||||||
Sbjct: 132 ttagatgtaacggtgaagttggtgtcgataccagcaagaaccttaagtagaccttggaag 73
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct: 72 acagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcgttcctccaccaa 13
Query: 868 tcctcaatgc 877
||||||||||
Sbjct: 12 tcctcaatgc 3
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 432 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 373
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 372 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 313
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 312 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 253
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 252 taagagacaccagccac 236
>gb|AV529187.1|AV529187 AV529187 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL29h02R 5', mRNA
sequence
Length = 316
Score = 103 bits (52), Expect = 2e-019
Identities = 151/184 (82%)
Strand = Plus / Minus
Query: 2385 cccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaac 2444
|||||||| |||||||||| ||||||||||| || | |||||| || | |||||||||||
Sbjct: 316 cccatttctttgcaaactcagcggtttcagaaagggattcaaaggtaagcatagctgaac 257
Query: 2445 cgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggaca 2504
| ||||| ||||||||||| | |||||| || || ||||| ||||||| |||||| || |
Sbjct: 256 catcatctgaaacataacaggctactttatctaccgggtagtccacagaaagaatcgaga 197
Query: 2505 ggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaaga 2564
| || ||||| | |||| || ||||| || || | ||| ||||||||||||||||| |
Sbjct: 196 gaactgtgtttgctgtaacaaggggaggctctttcaatgggtccactgtactaacaaaca 137
Query: 2565 catc 2568
||||
Sbjct: 136 catc 133
>gb|BP831231.1|BP831231 BP831231 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-88-F17 5',
mRNA sequence
Length = 410
Score = 103 bits (52), Expect = 2e-019
Identities = 195/240 (81%), Gaps = 2/240 (0%)
Strand = Plus / Minus
Query: 1092 ccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaacc 1151
|||||||| ||||||||||||||||||||| ||||||||||| ||||| || | || ||
Sbjct: 402 ccttccatggtaaccataccagataggacaatgtctgctaagaagaatctcgatagatcc 343
Query: 1152 aagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccctt 1211
| |||||| || | |||||||| | ||||||||||||||| ||| | ||||| |||||
Sbjct: 342 caaagcccatcgaagaacttggttcaaacgatcagaaagattgatt-gtgcagatccctt 284
Query: 1212 gaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttgaa 1271
| || ||| || | || |||||||||| ||||||||||| | ||||||||||||||
Sbjct: 283 aacgc-agggcgtggaggattgcagtagatcgatatccaaccccgggcatgcatcttgaa 225
Query: 1272 accagttaaaatatcttcagtaacagagccatatatccatccgatctctttcccccattc 1331
||| | | ||||||||| || || || ||||| ||||| || |||||||| ||||||||
Sbjct: 224 cccactaagaatatcttccgtcacggaaccatagatccaaccaatctctttgccccattc 165
>gb|BP837495.1|BP837495 BP837495 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-20-O19 5',
mRNA sequence
Length = 390
Score = 99.6 bits (50), Expect = 3e-018
Identities = 183/226 (80%), Gaps = 1/226 (0%)
Strand = Plus / Minus
Query: 1106 cataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgta 1165
||||||||||||||| ||||||||||| ||||| || | || || | |||||| || |
Sbjct: 390 cataccagataggaccatgtctgctaagaagaatctcgatagatcccaaagcccatcgaa 331
Query: 1166 acacttggttgagacgatcagaaagattaattggagcagaacccttgaagcaaggccgaa 1225
|||||||| | ||||||||||||||| ||||| ||||| |||||||| ||| ||
Sbjct: 330 gaacttggttcaaacgatcagaaagattgattggtgcagatcccttgaacgcagggcgtg 271
Query: 1226 gtggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatat 1285
| || |||||||||| ||||||||||| | |||||||||||||| |||| ||| ||||
Sbjct: 270 gaggattgcagtagatcgatatccaaccccgggcatgcatcttgaacccag-taagatat 212
Query: 1286 cttcagtaacagagccatatatccatccgatctctttcccccattc 1331
|||| || || || ||||| ||||| || |||||||| ||||||||
Sbjct: 211 cttccgtcacggaaccatagatccaaccaatctctttgccccattc 166
>emb|AJ838254.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
355C10
Length = 556
Score = 99.6 bits (50), Expect = 3e-018
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 796 agaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctca 855
||||||||||| ||||||| ||||| || || ||||||||||||||||| ||||||||
Sbjct: 445 agaccttggaaggcagcaaaaagatgggcggatgtgccaccaatgacccagaactgctcg 386
Query: 856 tttctccaccaatcctcaatgccaacaccactccatcgaagctcca 901
|| ||||||||||||||||||| ||||| ||||||| |||||||
Sbjct: 385 ttcctccaccaatcctcaatgctcacaccgctccatctcagctcca 340
Score = 83.8 bits (42), Expect = 2e-013
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||| ||||| || ||||||||||| || || | ||||||| ||| |
Sbjct: 129 gggatggatgtaataggatagacgatggtgttgatataagcgatcctctccaaaagtctc 70
Query: 1090 agccttccattgtaaccataccagataggacagtgtctgctaagtagaat 1139
| |||||||| ||||||||||||||||||||| ||||||||||| |||||
Sbjct: 69 aaccttccatggtaaccataccagataggacaatgtctgctaagaagaat 20
>gb|T20516.1|T20516 2524 Lambda-PRL2 Arabidopsis thaliana cDNA clone 86B7T7A, mRNA
sequence
Length = 425
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 135 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 194
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 195 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 254
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 255 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 314
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 315 taagagacaccagccac 331
>gb|AV782576.1|AV782576 AV782576 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-19-E02 3',
mRNA sequence
Length = 627
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 402 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 461
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 462 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 521
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 522 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 581
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 582 taagagacaccagccac 598
>gb|AV538027.1|AV538027 AV538027 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ109c04F 3', mRNA sequence
Length = 595
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 314 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 373
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 374 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 433
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 434 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 493
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 494 taagagacaccagccac 510
>gb|AV546309.1|AV546309 AV546309 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL11g12F 3', mRNA sequence
Length = 602
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 402 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 461
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 462 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 521
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 522 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 581
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 582 taagagacaccagccac 598
>gb|AV552905.1|AV552905 AV552905 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ48e11R 5', mRNA sequence
Length = 528
Score = 97.6 bits (49), Expect = 1e-017
Identities = 160/197 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 310 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 251
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 250 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 191
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 190 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 131
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 130 taagagacaccagccac 114
>gb|BP824749.1|BP824749 BP824749 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-66-D23 5',
mRNA sequence
Length = 387
Score = 97.6 bits (49), Expect = 1e-017
Identities = 178/221 (80%)
Strand = Plus / Minus
Query: 1111 cagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgtaacact 1170
||||||||||| ||||||||||| ||||| || | || || |||||| || | |||
Sbjct: 387 cagataggacaatgtctgctaagaagaatctctatagatccccaagcccatcgaagaact 328
Query: 1171 tggttgagacgatcagaaagattaattggagcagaacccttgaagcaaggccgaagtggc 1230
||||| | ||||||||||||||| ||||| ||||| |||||||| ||| || | ||
Sbjct: 327 tggttcaaacgatcagaaagattgattggtgcagatcccttgaacgcagggcgtggagga 268
Query: 1231 atgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatcttca 1290
|||||||||| ||||||||||| | |||||||||||||| ||||| | |||||||||
Sbjct: 267 ttgcagtagatcgatatccaaccccgggcatgcatcttgaacccagtaagaatatcttcc 208
Query: 1291 gtaacagagccatatatccatccgatctctttcccccattc 1331
|| || || ||||| ||||| || |||||||| ||||||||
Sbjct: 207 gtcacggaaccatagatccaaccaatctctttgccccattc 167
>gb|BZ769710.1|BZ769710 SALK_142637.45.60.n Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_142637.45.60.n,
DNA sequence
Length = 168
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Plus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 30 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 89
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 90 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 149
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 150 cccttgaa 157
>emb|AL771826.1| Arabidopsis thaliana T-DNA flanking sequence GK-183E08-013595,
genomic survey sequence
Length = 724
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Plus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 345 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 404
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 405 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 464
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 465 cccttgaa 472
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 486 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 545
Query: 1288 tcagtaacagagccatatatccatccgatct 1318
|| || ||||| ||||| |||||||| ||||
Sbjct: 546 tctgtcacagaaccatagatccatccaatct 576
>gb|CW794531.1|CW794531 WiscDsLox364G07 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 840
Score = 95.6 bits (48), Expect = 4e-017
Identities = 170/211 (80%)
Strand = Plus / Minus
Query: 1789 aaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttg 1848
|||||||||| | |||| ||| || ||||||||||||||||| |||||||| || | |||
Sbjct: 618 aaagaagacagtattcctgttggcgtatcgatcatgcaagtcaataccatcgaaacgttg 559
Query: 1849 tggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagc 1908
||||||||| || |||||| ||| |||| | ||| || ||||||||||||||||| ||
Sbjct: 558 tggaaactgcacgtagcaacacttctttccgattgcagggtccatcatgaaacacatggc 499
Query: 1909 ctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagc 1968
|| ||| || |||||| | |||||||| ||||||||||| || || | |||||| ||
Sbjct: 498 ttccttaatcgccttgctgttgttgaagtaatgatcacaatcaacgttcaaaagatacgc 439
Query: 1969 accattcgtcaggacagctgatacgcgaatc 1999
||||| || || ||||| || || ||||||
Sbjct: 438 cccattagtaagaacagcagaaacncgaatc 408
>gb|BU635836.1|BU635836 039C03 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 656
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 511 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 452
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 451 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 392
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 391 cccttgaa 384
Score = 61.9 bits (31), Expect = 6e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 370 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 311
Query: 1288 tcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcata 1346
|| || ||||| ||||| |||||||| ||||| | ||||| |||| |||||||||||
Sbjct: 310 tctgtcacagaaccatagatccatccaatctccattccccaatctgacttatcctcata 252
>gb|CB074343.1|CB074343 EST00858 Virulent Peronospora parasitica Infected Arabidopsis
Forward-Subtracted Library Arabidopsis thaliana cDNA
clone VPP-DC2 similar to CELLULOSE SYNTHASE CATALYTIC
SUBUNIT, mRNA sequence
Length = 585
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 512 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 453
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 452 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 393
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 392 cccttgaa 385
Score = 56.0 bits (28), Expect = 3e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 371 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 312
Query: 1288 tcagtaacagagccatatatccatccgatctc 1319
|| || ||||| ||||| |||||||| |||||
Sbjct: 311 tctgtcacagaaccatagatccatccaatctc 280
>gb|AF027174.1|AF027174 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-B)
mRNA, complete cds
Length = 3682
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 2747 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 2688
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 2687 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 2628
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 2627 cccttgaa 2620
Score = 91.7 bits (46), Expect = 6e-016
Identities = 166/206 (80%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 3149 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 3090
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 3089 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 3030
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 3029 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 2970
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 2969 cattcgtctatgcctacgccactcca 2944
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 3303 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 3244
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 3243 gagtggtccccatgattggtatccactgttgatagcataagagactcc 3196
Score = 75.8 bits (38), Expect = 4e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| ||||| ||||| |||||||||||||| ||||||| ||| ||| |||||||||
Sbjct: 2108 catccagttccgacatatacaggtccttgaatcccatctaaacctctcaagttaatatca 2049
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| || | || || || ||||||| ||| | | || ||||||||||||||||||
Sbjct: 2048 aagaacacggtattacgattagcatatctatcgttcttatcgataccatcaaatctttgt 1989
Query: 1850 ggaaactgaacata 1863
|| |||||||||||
Sbjct: 1988 gggaactgaacata 1975
Score = 75.8 bits (38), Expect = 4e-011
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct: 1835 gcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcgagaaaca 1776
Query: 2063 ta 2064
||
Sbjct: 1775 ta 1774
Score = 71.9 bits (36), Expect = 6e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 2579 aactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttca 2638
||||| ||||||||||| || | ||||||||| || ||||| || |||||||| ||||||
Sbjct: 1259 aactgtgatggctcaccttcacgatcatatcttaaagcaagcctgtcgaggtaggtttca 1200
Query: 2639 cggttgataggataccactttgggaactgatc 2670
||||| | |||| ||||||| || ||||||||
Sbjct: 1199 cggttcacaggaaaccacttgggaaactgatc 1168
Score = 61.9 bits (31), Expect = 6e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 2606 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 2547
Query: 1288 tcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcata 1346
|| || ||||| ||||| |||||||| ||||| | ||||| |||| |||||||||||
Sbjct: 2546 tctgtcacagaaccatagatccatccaatctccattccccaatctgacttatcctcata 2488
Score = 56.0 bits (28), Expect = 3e-005
Identities = 106/132 (80%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 1470 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 1411
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| |||||| |||||||||| || || |||||||| ||||| ||
Sbjct: 1410 tgataacatagcagcaccatcatcaaaaacataacaggacaccttgtcaactgggtagtc 1351
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 1350 aacagccagaat 1339
>dbj|BD022678.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 3614
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 2708 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 2649
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 2648 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 2589
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 2588 cccttgaa 2581
Score = 91.7 bits (46), Expect = 6e-016
Identities = 166/206 (80%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 3110 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 3051
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 3050 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 2991
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 2990 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 2931
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 2930 cattcgtctatgcctacgccactcca 2905
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 3264 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 3205
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 3204 gagtggtccccatgattggtatccactgttgatagcataagagactcc 3157
Score = 75.8 bits (38), Expect = 4e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| ||||| ||||| |||||||||||||| ||||||| ||| ||| |||||||||
Sbjct: 2069 catccagttccgacatatacaggtccttgaatcccatctaaacctctcaagttaatatca 2010
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| || | || || || ||||||| ||| | | || ||||||||||||||||||
Sbjct: 2009 aagaacacggtattacgattagcatatctatcgttcttatcgataccatcaaatctttgt 1950
Query: 1850 ggaaactgaacata 1863
|| |||||||||||
Sbjct: 1949 gggaactgaacata 1936
Score = 75.8 bits (38), Expect = 4e-011
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct: 1796 gcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcgagaaaca 1737
Query: 2063 ta 2064
||
Sbjct: 1736 ta 1735
Score = 71.9 bits (36), Expect = 6e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 2579 aactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttca 2638
||||| ||||||||||| || | ||||||||| || ||||| || |||||||| ||||||
Sbjct: 1220 aactgtgatggctcaccttcacgatcatatcttaaagcaagcctgtcgaggtaggtttca 1161
Query: 2639 cggttgataggataccactttgggaactgatc 2670
||||| | |||| ||||||| || ||||||||
Sbjct: 1160 cggttcacaggaaaccacttgggaaactgatc 1129
Score = 63.9 bits (32), Expect = 1e-007
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 1431 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 1372
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 1371 tgataacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtc 1312
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 1311 aacagccagaat 1300
Score = 61.9 bits (31), Expect = 6e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 2567 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 2508
Query: 1288 tcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcata 1346
|| || ||||| ||||| |||||||| ||||| | ||||| |||| |||||||||||
Sbjct: 2507 tctgtcacagaaccatagatccatccaatctccattccccaatctgacttatcctcata 2449
>emb|AX030946.1| Sequence 9 from Patent WO9800549
Length = 3614
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 2708 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 2649
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 2648 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 2589
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 2588 cccttgaa 2581
Score = 91.7 bits (46), Expect = 6e-016
Identities = 166/206 (80%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 3110 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 3051
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 3050 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 2991
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 2990 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 2931
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 2930 cattcgtctatgcctacgccactcca 2905
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 3264 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 3205
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 3204 gagtggtccccatgattggtatccactgttgatagcataagagactcc 3157
Score = 75.8 bits (38), Expect = 4e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| ||||| ||||| |||||||||||||| ||||||| ||| ||| |||||||||
Sbjct: 2069 catccagttccgacatatacaggtccttgaatcccatctaaacctctcaagttaatatca 2010
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| || | || || || ||||||| ||| | | || ||||||||||||||||||
Sbjct: 2009 aagaacacggtattacgattagcatatctatcgttcttatcgataccatcaaatctttgt 1950
Query: 1850 ggaaactgaacata 1863
|| |||||||||||
Sbjct: 1949 gggaactgaacata 1936
Score = 75.8 bits (38), Expect = 4e-011
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct: 1796 gcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcgagaaaca 1737
Query: 2063 ta 2064
||
Sbjct: 1736 ta 1735
Score = 71.9 bits (36), Expect = 6e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 2579 aactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttca 2638
||||| ||||||||||| || | ||||||||| || ||||| || |||||||| ||||||
Sbjct: 1220 aactgtgatggctcaccttcacgatcatatcttaaagcaagcctgtcgaggtaggtttca 1161
Query: 2639 cggttgataggataccactttgggaactgatc 2670
||||| | |||| ||||||| || ||||||||
Sbjct: 1160 cggttcacaggaaaccacttgggaaactgatc 1129
Score = 63.9 bits (32), Expect = 1e-007
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 1431 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 1372
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 1371 tgataacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtc 1312
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 1311 aacagccagaat 1300
Score = 61.9 bits (31), Expect = 6e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 2567 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 2508
Query: 1288 tcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcata 1346
|| || ||||| ||||| |||||||| ||||| | ||||| |||| |||||||||||
Sbjct: 2507 tctgtcacagaaccatagatccatccaatctccattccccaatctgacttatcctcata 2449
>gb|BT002335.1| Arabidopsis thaliana clone C104938 putative cellulose synthase
catalytic subunit (At5g05170) mRNA, complete cds
Length = 3229
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 2492 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 2433
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 2432 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 2373
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 2372 cccttgaa 2365
Score = 91.7 bits (46), Expect = 6e-016
Identities = 166/206 (80%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 2894 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 2835
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 2834 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 2775
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 2774 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 2715
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 2714 cattcgtctatgcctacgccactcca 2689
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 3048 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 2989
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 2988 gagtggtccccatgattggtatccactgttgatagcataagagactcc 2941
Score = 83.8 bits (42), Expect = 2e-013
Identities = 142/176 (80%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct: 1580 gcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcgagaaaca 1521
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaat 2122
|| || | || || | |||||| || || | ||||| |||||| | || || |||||
Sbjct: 1520 tataccaaacgcgggagctcattgccctctgcatcaagtccaccattttgccctaagaag 1461
Query: 2123 acttggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
|| ||||||||||| ||||| || || | ||||| |||||||| || ||||||||
Sbjct: 1460 acctggatcattcctggatggtcccttgtattatttccaggccacggtgtgccatc 1405
Score = 75.8 bits (38), Expect = 4e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| ||||| ||||| |||||||||||||| ||||||| ||| ||| |||||||||
Sbjct: 1853 catccagttccgacatatacaggtccttgaatcccatctaaacctctcaagttaatatca 1794
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| || | || || || ||||||| ||| | | || ||||||||||||||||||
Sbjct: 1793 aagaacacggtattacgattagcatatctatcgttcttatcgataccatcaaatctttgt 1734
Query: 1850 ggaaactgaacata 1863
|| |||||||||||
Sbjct: 1733 gggaactgaacata 1720
Score = 71.9 bits (36), Expect = 6e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 2579 aactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttca 2638
||||| ||||||||||| || | ||||||||| || ||||| || |||||||| ||||||
Sbjct: 1004 aactgtgatggctcaccttcacgatcatatcttaaagcaagcctgtcgaggtaggtttca 945
Query: 2639 cggttgataggataccactttgggaactgatc 2670
||||| | |||| ||||||| || ||||||||
Sbjct: 944 cggttcacaggaaaccacttgggaaactgatc 913
Score = 63.9 bits (32), Expect = 1e-007
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 1215 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 1156
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 1155 tgataacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtc 1096
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 1095 aacagccagaat 1084
Score = 61.9 bits (31), Expect = 6e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 2351 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 2292
Query: 1288 tcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcata 1346
|| || ||||| ||||| |||||||| ||||| | ||||| |||| |||||||||||
Sbjct: 2291 tctgtcacagaaccatagatccatccaatctccattccccaatctgacttatcctcata 2233
>emb|BX821788.1|CNS0A924 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL73ZH10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 1152
Score = 95.6 bits (48), Expect = 4e-017
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| ||||| ||||| || || ||||| ||||| || ||||| ||||| | ||
Sbjct: 697 agaagagacgtccatttgaagacgtaaagctctgcaaagtctccatcttcatctgaggct 638
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||||||||| |||||||||||||| |||||||| | ||||| | |||||||| |||
Sbjct: 637 tttgatgtgactgtgaagtttgtgtctatccctgcaaaaactttgagtagaccttgaaac 578
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| || || || ||||| || |||||||||||||| || ||||||||
Sbjct: 577 actgcaaaaagatgagccgatgttccaccgattacccaaaactgctcgttcctccaccag 518
Query: 868 tcctcaatgccaacaccactccat 891
|| |||| | | ||| ||||||||
Sbjct: 517 tcttcaagggccacatcactccat 494
Score = 93.7 bits (47), Expect = 2e-016
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 1234 cagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagta 1293
|||||||| ||||||||||| ||||||||||||||||| ||||| | ||||||||| ||
Sbjct: 151 cagtagattgatatccaaccccttgcatgcatcttgaatccagtaagaatatcttctgtc 92
Query: 1294 acagagccatatatccatccgatctctttccccca 1328
||||| || || ||||| ||||||||||| |||||
Sbjct: 91 acagaaccgtagatccacccgatctctttgcccca 57
Score = 60.0 bits (30), Expect = 2e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagcttt 1089
||||| |||||||||||||| || ||||| |||||||| || | |||||||| ||| ||
Sbjct: 355 gggatggatgtaattggatagactatggtattgatgtaggcaattctctccaaaagtttc 296
Query: 1090 agccttccattgtaaccataccagataggacagtgtct 1127
| ||| ||||| || |||||||| ||||| || |||||
Sbjct: 295 aacctcccattatagccataccatatagggcaatgtct 258
>dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A11
Length = 29292
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Plus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 11860 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 11919
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 11920 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 11979
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 11980 cccttgaa 11987
Score = 91.7 bits (46), Expect = 6e-016
Identities = 166/206 (80%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 11303 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 11362
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 11363 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 11422
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 11423 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 11482
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 11483 cattcgtctatgcctacgccactcca 11508
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 11149 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 11208
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 11209 gagtggtccccatgattggtatccactgttgatagcataagagactcc 11256
Score = 75.8 bits (38), Expect = 4e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct: 13238 gcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcgagaaaca 13297
Query: 2063 ta 2064
||
Sbjct: 13298 ta 13299
Score = 63.9 bits (32), Expect = 1e-007
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 13771 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 13830
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 13831 tgataacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtc 13890
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 13891 aacagccagaat 13902
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1832 ataccatcaaatctttgtggaaactgaacata 1863
|||||||||||||||||||| |||||||||||
Sbjct: 12986 ataccatcaaatctttgtgggaactgaacata 13017
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 12001 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 12060
Query: 1288 tcagtaacagagccatatatccatccgatct 1318
|| || ||||| ||||| |||||||| ||||
Sbjct: 12061 tctgtcacagaaccatagatccatccaatct 12091
Score = 48.1 bits (24), Expect = 0.009
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 2615 gcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactgatc 2670
||||| || |||||||| ||||||||||| | |||| ||||||| || ||||||||
Sbjct: 14118 gcaagcctgtcgaggtaggtttcacggttcacaggaaaccacttgggaaactgatc 14173
Score = 48.1 bits (24), Expect = 0.009
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatcta 1769
||||| ||||| ||||| |||||||||||||| |||||||
Sbjct: 12758 catccagttccgacatatacaggtccttgaatcccatcta 12797
Score = 38.2 bits (19), Expect = 8.2
Identities = 44/53 (83%)
Strand = Plus / Plus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||||||||| ||||| || || | ||||| |||||||| || ||||||||
Sbjct: 13449 tggatcattcctggatggtcccttgtattatttccaggccacggtgtgccatc 13501
>ref|NM_127746.1| Arabidopsis thaliana CESA9 (CELLULASE SYNTHASE 9); transferase,
transferring glycosyl groups AT2G21770 (CESA9) mRNA,
complete cds
Length = 3308
Score = 95.6 bits (48), Expect = 4e-017
Identities = 144/176 (81%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
|||||||||||||||||||| ||||||| || |||||| | |||| ||| ||||||||
Sbjct: 1763 tccatcatgaaacacatagcttctctaattgccttgctgttgttgatgtaatgatcacag 1704
Query: 1949 tccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattc 2008
|||||||||||||| |||| | |||| | || ||||| ||||| || ||||| | ||||
Sbjct: 1703 tccacattaagaaggtaaggagcatttgagagaacagcagatacccggatcaaggaattc 1644
Query: 2009 atggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|| || ||||||||||| ||||| | || || || | ||| ||||||||||||||
Sbjct: 1643 atagctccagccttcttatggtgatcaaatcccggtcgcttctcacgagaaacata 1588
Score = 91.7 bits (46), Expect = 6e-016
Identities = 247/314 (78%)
Strand = Plus / Minus
Query: 2381 ggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagct 2440
||||||||||| ||||||||||| || || | ||| ||||||||||| || | ||| ||
Sbjct: 1271 ggaacccattttcttgcaaactcggctgtgtaagagagagcttcaaatgtaagcattgca 1212
Query: 2441 gaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatg 2500
| ||| ||||| || |||||||||| || || ||||| || ||||| ||||| |||||
Sbjct: 1211 gcaccatcatctgatacataacatgcaaccttctcaaccggataatcaacagcgagaata 1152
Query: 2501 gacaggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaaca 2560
||||| || || || | ||||| || ||||| || || | ||||||||| |||||||||
Sbjct: 1151 gacagaaccgtatttgctgtaatcagtggaggctctttcaatggatccacagtactaaca 1092
Query: 2561 aagacatcgattggagccaactgggatggctcaccctccctatcatatctcaatgcaagt 2620
|||||||||| || || |||| ||||||| || ||| | ||||| || | | |||
Sbjct: 1091 aagacatcgacaggcgctaactctgatggcttcccttccttctcataccttagagaaagc 1032
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
|| ||||| || ||||| | | ||| |||||||| |||||||||||||| |||| ||||
Sbjct: 1031 ctgtcgagatatgtttctctttcgatgggataccattttgggaactgatcaagaatccaa 972
Query: 2681 gacaaagcaaacca 2694
|||| ||| |||||
Sbjct: 971 gacacagcgaacca 958
Score = 75.8 bits (38), Expect = 4e-011
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| ||||| ||||| ||||| || |||||||| ||||| || |||||
Sbjct: 2388 atgcatcttgaaacccgttaagatatcctcagtgaccgagccataaatccacccaatctc 2329
Query: 1320 tttcccccattctgtttt 1337
||| |||||||| |||||
Sbjct: 2328 ttttccccattcggtttt 2311
Score = 63.9 bits (32), Expect = 1e-007
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 798 accttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatt 857
|||||| |||| |||||| ||||| | |||| || |||||||||||||||||||| ||
Sbjct: 2850 accttgaaacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtt 2791
Query: 858 tctccaccaatc 869
||||||||||||
Sbjct: 2790 tctccaccaatc 2779
>ref|NM_120599.2| Arabidopsis thaliana CESA3 (CELLULASE SYNTHASE 3); cellulose
synthase/ transferase, transferring glycosyl groups
AT5G05170 (CESA3) mRNA, complete cds
Length = 3607
Score = 95.6 bits (48), Expect = 4e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 2674 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 2615
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 2614 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 2555
Query: 1207 cccttgaa 1214
||||||||
Sbjct: 2554 cccttgaa 2547
Score = 91.7 bits (46), Expect = 6e-016
Identities = 166/206 (80%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 3076 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 3017
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 3016 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 2957
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 2956 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 2897
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 2896 cattcgtctatgcctacgccactcca 2871
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 3230 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 3171
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 3170 gagtggtccccatgattggtatccactgttgatagcataagagactcc 3123
Score = 83.8 bits (42), Expect = 2e-013
Identities = 142/176 (80%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||| |||||||||||||| ||||| | |||||| |||||||||
Sbjct: 1762 gcattcatagcaccagcctttttgtggtgctggaatcctggtcgcttttctcgagaaaca 1703
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaat 2122
|| || | || || | |||||| || || | ||||| |||||| | || || |||||
Sbjct: 1702 tataccaaacgcgggagctcattgccctctgcatcaagtccaccattttgccctaagaag 1643
Query: 2123 acttggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
|| ||||||||||| ||||| || || | ||||| |||||||| || ||||||||
Sbjct: 1642 acctggatcattcctggatggtcccttgtattatttccaggccacggtgtgccatc 1587
Score = 75.8 bits (38), Expect = 4e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| ||||| ||||| |||||||||||||| ||||||| ||| ||| |||||||||
Sbjct: 2035 catccagttccgacatatacaggtccttgaatcccatctaaacctctcaagttaatatca 1976
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| || | || || || ||||||| ||| | | || ||||||||||||||||||
Sbjct: 1975 aagaacacggtattacgattagcatatctatcgttcttatcgataccatcaaatctttgt 1916
Query: 1850 ggaaactgaacata 1863
|| |||||||||||
Sbjct: 1915 gggaactgaacata 1902
Score = 71.9 bits (36), Expect = 6e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 2579 aactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttca 2638
||||| ||||||||||| || | ||||||||| || ||||| || |||||||| ||||||
Sbjct: 1186 aactgtgatggctcaccttcacgatcatatcttaaagcaagcctgtcgaggtaggtttca 1127
Query: 2639 cggttgataggataccactttgggaactgatc 2670
||||| | |||| ||||||| || ||||||||
Sbjct: 1126 cggttcacaggaaaccacttgggaaactgatc 1095
Score = 63.9 bits (32), Expect = 1e-007
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 1397 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 1338
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 1337 tgataacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtc 1278
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 1277 aacagccagaat 1266
Score = 61.9 bits (31), Expect = 6e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 2533 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 2474
Query: 1288 tcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcata 1346
|| || ||||| ||||| |||||||| ||||| | ||||| |||| |||||||||||
Sbjct: 2473 tctgtcacagaaccatagatccatccaatctccattccccaatctgacttatcctcata 2415
>gb|AV546311.1|AV546311 AV546311 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL11h06F 3', mRNA sequence
Length = 596
Score = 93.7 bits (47), Expect = 2e-016
Identities = 158/195 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 402 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 461
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 462 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 521
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 522 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 581
Query: 628 tacgacactccagcc 642
|| || || ||||||
Sbjct: 582 taagagacaccagcc 596
>dbj|BD022675.1| Manipulation of cellulose and/or beta-1,4-glucan
Length = 5009
Score = 93.7 bits (47), Expect = 2e-016
Identities = 151/183 (82%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||| |||| ||| ||||||| |||| |||||| || || |||||||||||
Sbjct: 3935 atcaaagaacacaacgttacggtttgagtatctatcatgtctatcaatcccatcaaatct 3876
Query: 1846 ttgtggaaactgaacatagcaagttttccttcct-agtgctggatccatcatgaaacaca 1904
|| |||||||||||||| ||| |||| |||| | ||| || ||||||||||||||||
Sbjct: 3875 ctgcggaaactgaacataacaaactttctttcccgattgcggg-tccatcatgaaacaca 3817
Query: 1905 tagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagat 1964
||| ||||||| ||||||||| | |||| ||||||||||||||| ||||||||||| |
Sbjct: 3816 tagattctctaattgctttgctgttgttgatgtagtgatcacaatcgacattaagaaggt 3757
Query: 1965 aag 1967
|||
Sbjct: 3756 aag 3754
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 2678 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 2619
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 2618 caagacactgcaaacca 2602
Score = 60.0 bits (30), Expect = 2e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||| ||||||||||| | || || |||| ||| ||||||||||||||
Sbjct: 3626 attcatagctccagctttcttgtggtgatcaaatccaggccgcttctcacgagaaacata 3567
Query: 2065 aacaagccgtggcaactcattcccatccgt 2094
|| || ||||| |||||||| ||||||||
Sbjct: 3566 cactagacgtggtaactcattaccatccgt 3537
Score = 58.0 bits (29), Expect = 9e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 3015 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 2956
Query: 2429 gtcaacatagctg 2441
|| | ||||||||
Sbjct: 2955 gtaagcatagctg 2943
Score = 46.1 bits (23), Expect = 0.034
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||||||||||||| || | ||||||||||| || || ||||| ||||| |||||||
Sbjct: 4715 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatct 4657
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2543 ggatccactgtactaacaaagacatc 2568
|||||||||||||||||||| |||||
Sbjct: 2841 ggatccactgtactaacaaaaacatc 2816
>emb|AX030941.1| Sequence 4 from Patent WO9800549
Length = 5009
Score = 93.7 bits (47), Expect = 2e-016
Identities = 151/183 (82%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||| |||| ||| ||||||| |||| |||||| || || |||||||||||
Sbjct: 3935 atcaaagaacacaacgttacggtttgagtatctatcatgtctatcaatcccatcaaatct 3876
Query: 1846 ttgtggaaactgaacatagcaagttttccttcct-agtgctggatccatcatgaaacaca 1904
|| |||||||||||||| ||| |||| |||| | ||| || ||||||||||||||||
Sbjct: 3875 ctgcggaaactgaacataacaaactttctttcccgattgcggg-tccatcatgaaacaca 3817
Query: 1905 tagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagat 1964
||| ||||||| ||||||||| | |||| ||||||||||||||| ||||||||||| |
Sbjct: 3816 tagattctctaattgctttgctgttgttgatgtagtgatcacaatcgacattaagaaggt 3757
Query: 1965 aag 1967
|||
Sbjct: 3756 aag 3754
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 2678 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 2619
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 2618 caagacactgcaaacca 2602
Score = 60.0 bits (30), Expect = 2e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||| ||||||||||| | || || |||| ||| ||||||||||||||
Sbjct: 3626 attcatagctccagctttcttgtggtgatcaaatccaggccgcttctcacgagaaacata 3567
Query: 2065 aacaagccgtggcaactcattcccatccgt 2094
|| || ||||| |||||||| ||||||||
Sbjct: 3566 cactagacgtggtaactcattaccatccgt 3537
Score = 58.0 bits (29), Expect = 9e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 3015 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 2956
Query: 2429 gtcaacatagctg 2441
|| | ||||||||
Sbjct: 2955 gtaagcatagctg 2943
Score = 46.1 bits (23), Expect = 0.034
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||||||||||||| || | ||||||||||| || || ||||| ||||| |||||||
Sbjct: 4715 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatct 4657
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2543 ggatccactgtactaacaaagacatc 2568
|||||||||||||||||||| |||||
Sbjct: 2841 ggatccactgtactaacaaaaacatc 2816
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
Length = 89035
Score = 93.7 bits (47), Expect = 2e-016
Identities = 151/183 (82%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||| |||| ||| ||||||| |||| |||||| || || |||||||||||
Sbjct: 82839 atcaaagaacacaacgttacggtttgagtatctatcatgtctatcaatcccatcaaatct 82780
Query: 1846 ttgtggaaactgaacatagcaagttttccttcct-agtgctggatccatcatgaaacaca 1904
|| |||||||||||||| ||| |||| |||| | ||| || ||||||||||||||||
Sbjct: 82779 ctgcggaaactgaacataacaaactttctttcccgattgcggg-tccatcatgaaacaca 82721
Query: 1905 tagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagat 1964
||| ||||||| ||||||||| | |||| ||||||||||||||| ||||||||||| |
Sbjct: 82720 tagattctctaattgctttgctgttgttgatgtagtgatcacaatcgacattaagaaggt 82661
Query: 1965 aag 1967
|||
Sbjct: 82660 aag 82658
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 81583 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 81524
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 81523 caagacactgcaaacca 81507
Score = 63.9 bits (32), Expect = 1e-007
Identities = 158/200 (79%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 81919 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 81860
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||||| ||| || || || |||||||| | || || || ||||| |||||
Sbjct: 81859 gtaagcatagctgcaccatcgtctgatacataacacgcaaccttatccacaggataatca 81800
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| || |||||||| || || ||||| | ||||| | || || || || | ||||||
Sbjct: 81799 actgctagaatggaaagaactgtgtttgctgtaatcaagggtggctctttcaacggatcc 81740
Query: 2549 actgtactaacaaagacatc 2568
|||||||||||||| |||||
Sbjct: 81739 actgtactaacaaaaacatc 81720
Score = 60.0 bits (30), Expect = 2e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||| ||||||||||| | || || |||| ||| ||||||||||||||
Sbjct: 82530 attcatagctccagctttcttgtggtgatcaaatccaggccgcttctcacgagaaacata 82471
Query: 2065 aacaagccgtggcaactcattcccatccgt 2094
|| || ||||| |||||||| ||||||||
Sbjct: 82470 cactagacgtggtaactcattaccatccgt 82441
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 84122 acccaaaactgctcgtttctccaccaatc 84094
Score = 46.1 bits (23), Expect = 0.034
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||||||||||||| || | ||||||||||| || || ||||| ||||| |||||||
Sbjct: 83619 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatct 83561
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
Length = 198151
Score = 93.7 bits (47), Expect = 2e-016
Identities = 151/183 (82%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||| |||| ||| ||||||| |||| |||||| || || |||||||||||
Sbjct: 20316 atcaaagaacacaacgttacggtttgagtatctatcatgtctatcaatcccatcaaatct 20257
Query: 1846 ttgtggaaactgaacatagcaagttttccttcct-agtgctggatccatcatgaaacaca 1904
|| |||||||||||||| ||| |||| |||| | ||| || ||||||||||||||||
Sbjct: 20256 ctgcggaaactgaacataacaaactttctttcccgattgcggg-tccatcatgaaacaca 20198
Query: 1905 tagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagat 1964
||| ||||||| ||||||||| | |||| ||||||||||||||| ||||||||||| |
Sbjct: 20197 tagattctctaattgctttgctgttgttgatgtagtgatcacaatcgacattaagaaggt 20138
Query: 1965 aag 1967
|||
Sbjct: 20137 aag 20135
Score = 65.9 bits (33), Expect = 4e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 2618 agtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagc 2677
|||||||||||||| |||||||| | ||||||||||| || ||||| ||||| |||| |
Sbjct: 19060 agtctatcgaggtatgtttcacgttctataggataccatttggggaattgatcaagaatc 19001
Query: 2678 caagacaaagcaaacca 2694
||||||| ||||||||
Sbjct: 19000 caagacactgcaaacca 18984
Score = 63.9 bits (32), Expect = 1e-007
Identities = 158/200 (79%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| ||||| ||||||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 19396 ttcttacaaaaaggaacccattttctagcaaactcagctgtatcagagagagcttcaaat 19337
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||||| ||| || || || |||||||| | || || || ||||| |||||
Sbjct: 19336 gtaagcatagctgcaccatcgtctgatacataacacgcaaccttatccacaggataatca 19277
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| || |||||||| || || ||||| | ||||| | || || || || | ||||||
Sbjct: 19276 actgctagaatggaaagaactgtgtttgctgtaatcaagggtggctctttcaacggatcc 19217
Query: 2549 actgtactaacaaagacatc 2568
|||||||||||||| |||||
Sbjct: 19216 actgtactaacaaaaacatc 19197
Score = 60.0 bits (30), Expect = 2e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||| ||||||||||| | || || |||| ||| ||||||||||||||
Sbjct: 20007 attcatagctccagctttcttgtggtgatcaaatccaggccgcttctcacgagaaacata 19948
Query: 2065 aacaagccgtggcaactcattcccatccgt 2094
|| || ||||| |||||||| ||||||||
Sbjct: 19947 cactagacgtggtaactcattaccatccgt 19918
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 21599 acccaaaactgctcgtttctccaccaatc 21571
Score = 46.1 bits (23), Expect = 0.034
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||||||||||||| || | ||||||||||| || || ||||| ||||| |||||||
Sbjct: 21096 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatct 21038
>gb|AV546312.1|AV546312 AV546312 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL11h08F 3', mRNA sequence
Length = 603
Score = 91.7 bits (46), Expect = 6e-016
Identities = 148/182 (81%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 420 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 479
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 480 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 539
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||||||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 540 aaggcgaagaagagcttcccgaaaagcggaccccacgactggtagccactgtttacagca 599
Query: 628 ta 629
||
Sbjct: 600 ta 601
>gb|CB253730.1|CB253730 90-E010932-019-003-C24-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768C243Q 5-PRIME, mRNA sequence
Length = 565
Score = 91.7 bits (46), Expect = 6e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||
Sbjct: 368 ggatccatcatgaaacacattgcttctctaagagctttgctattgttgatgtagtgatca 309
Query: 1946 caatccacattaagaagataag 1967
||||| ||||| ||||| ||||
Sbjct: 308 caatcgacattcagaaggtaag 287
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
sequence
Length = 107848
Score = 91.7 bits (46), Expect = 6e-016
Identities = 247/314 (78%)
Strand = Plus / Minus
Query: 2381 ggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagct 2440
||||||||||| ||||||||||| || || | ||| ||||||||||| || | ||| ||
Sbjct: 17787 ggaacccattttcttgcaaactcggctgtgtaagagagagcttcaaatgtaagcattgca 17728
Query: 2441 gaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatg 2500
| ||| ||||| || |||||||||| || || ||||| || ||||| ||||| |||||
Sbjct: 17727 gcaccatcatctgatacataacatgcaaccttctcaaccggataatcaacagcgagaata 17668
Query: 2501 gacaggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaaca 2560
||||| || || || | ||||| || ||||| || || | ||||||||| |||||||||
Sbjct: 17667 gacagaaccgtatttgctgtaatcagtggaggctctttcaatggatccacagtactaaca 17608
Query: 2561 aagacatcgattggagccaactgggatggctcaccctccctatcatatctcaatgcaagt 2620
|||||||||| || || |||| ||||||| || ||| | ||||| || | | |||
Sbjct: 17607 aagacatcgacaggcgctaactctgatggcttcccttccttctcataccttagagaaagc 17548
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
|| ||||| || ||||| | | ||| |||||||| |||||||||||||| |||| ||||
Sbjct: 17547 ctgtcgagatatgtttctctttcgatgggataccattttgggaactgatcaagaatccaa 17488
Query: 2681 gacaaagcaaacca 2694
|||| ||| |||||
Sbjct: 17487 gacacagcgaacca 17474
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
|||||||||||||||||||| ||||||| || |||||| | |||| ||| ||||||||
Sbjct: 18536 tccatcatgaaacacatagcttctctaattgccttgctgttgttgatgtaatgatcacag 18477
Query: 1949 tccacattaagaagataag 1967
|||||||||||||| ||||
Sbjct: 18476 tccacattaagaaggtaag 18458
Score = 63.9 bits (32), Expect = 1e-007
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 798 accttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatt 857
|||||| |||| |||||| ||||| | |||| || |||||||||||||||||||| ||
Sbjct: 20001 accttgaaacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtt 19942
Query: 858 tctccaccaatc 869
||||||||||||
Sbjct: 19941 tctccaccaatc 19930
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
||||||||||||||| ||||| ||||| ||||| || |||||||| |||||
Sbjct: 19423 atgcatcttgaaacccgttaagatatcctcagtgaccgagccataaatcca 19373
>gb|AV523139.1|AV523139 AV523139 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL17g05F 3', mRNA
sequence
Length = 601
Score = 89.7 bits (45), Expect = 3e-015
Identities = 159/197 (80%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 357 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 416
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 417 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 476
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||| ||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 477 aaggcgaagaagagctttccgaaaagcggaccccacgactggtagccactgtttacagca 536
Query: 628 tacgacactccagccac 644
|| || || ||||||||
Sbjct: 537 taagagacaccagccac 553
>emb|BX829135.1|CNS0A3FB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL74ZE06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 666
Score = 89.7 bits (45), Expect = 3e-015
Identities = 159/197 (80%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| | |||||||||||| |||
Sbjct: 225 acccaaagcaacgagaagatggaggcgagaagaacagaccagaaaatgacgatggttggt 166
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 165 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 106
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| || ||||| ||||| ||||| || |||||||| || |||||||||||||| | ||||
Sbjct: 105 aaggcgaagaagagcttaccgaaaagcggaccccacgactggtagccactgtttacagca 46
Query: 628 tacgacactccagccac 644
|| ||||| ||||||||
Sbjct: 45 taagacacaccagccac 29
>gb|BH252912.1|BH252912 SALK_014134 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_014134, DNA sequence
Length = 465
Score = 87.7 bits (44), Expect = 1e-014
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||| ||||||||||||||||| |||||||| || | || | ||||| ||||||
Sbjct: 341 tttagcctcccattgtaaccataccatataggacaatgccgactgaagagaatctcaact 400
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | |||||| | | ||||||||| |||||||| |||||||| || |||||||||
Sbjct: 401 gaacctaaagcccacctcagcacttggttcagacgatctgaaagattgataggagcagaa 460
Query: 1207 ccct 1210
||||
Sbjct: 461 ccct 464
>gb|CW794257.1|CW794257 WiscDsLox358C09 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 878
Score = 87.7 bits (44), Expect = 1e-014
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 1691 acaggatcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaaca 1750
||||||||||| ||||||||||||||||| ||||||||||| || || |||||||| |||
Sbjct: 533 acaggatcatacccatacaaggcctgcctgttgaaacagcagccagtgcccacatacaca 474
Query: 1751 ggtccttgaatgccatctagacccttca 1778
|| ||||| || ||||||| |||||||
Sbjct: 473 ggaccttgtataccatctaaccccttca 446
Score = 71.9 bits (36), Expect = 6e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||||||| | |||| ||| || ||||||||||||||||| |||||||| || |
Sbjct: 338 atcaaagaagacagtattcctgttggcgtatcgatcatgcaagtcaataccatcgaaacg 279
Query: 1846 ttgtggaaactg 1857
||||||||||||
Sbjct: 278 ttgtggaaactg 267
>gb|BE038216.1|BE038216 AA10E02 AA Arabidopsis thaliana cDNA 5' similar to cellulose
synthase catalytic subunit, mRNA sequence
Length = 691
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 263 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 204
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 203 gagtggtccccatgattggtatccactgttgatagcataagagactcc 156
Score = 50.1 bits (25), Expect = 0.002
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 109 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccctcttcatctgaa 50
Query: 745 gcctttgatgtgaccgtgaagtttgtgtc 773
|| ||||| || || ||||||||||||||
Sbjct: 49 gcttttgaggtaactgtgaagtttgtgtc 21
>gb|AV823492.1|AV823492 AV823492 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-19-M03 5',
mRNA sequence
Length = 540
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 181 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 122
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 121 gagtggtccccatgattggtatccactgttgatagcataagagactcc 74
>gb|AV523438.1|AV523438 AV523438 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL27f02F 3', mRNA
sequence
Length = 596
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 312 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 371
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 372 gagtggtccccatgattggtatccactgttgatagcataagagactcc 419
Score = 48.1 bits (24), Expect = 0.009
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || | || ||||| |
Sbjct: 466 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctacgtcttcatctgaa 525
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 526 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 585
Query: 805 aacacagc 812
||||||||
Sbjct: 586 aacacagc 593
>gb|AV523635.1|AV523635 AV523635 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL34f12F 3', mRNA
sequence
Length = 545
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 306 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 365
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 366 gagtggtccccatgattggtatccactgttgatagcataagagactcc 413
Score = 44.1 bits (22), Expect = 0.13
Identities = 70/86 (81%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 460 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 519
Query: 745 gcctttgatgtgaccgtgaagtttgt 770
|| ||||| || || |||||||||||
Sbjct: 520 gcttttgaggtaactgtgaagtttgt 545
>gb|AV530046.1|AV530046 AV530046 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL56g12R 5', mRNA
sequence
Length = 506
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 361 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 420
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 421 gagtggtccccatgattggtatccactgttgatagcataagagactcc 468
>gb|AV546683.1|AV546683 AV546683 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL17h10F 3', mRNA sequence
Length = 563
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 366 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 425
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 426 gagtggtccccatgattggtatccactgttgatagcataagagactcc 473
Score = 42.1 bits (21), Expect = 0.53
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaa 725
|||||||| |||||||| ||||||| || |||||||||||
Sbjct: 520 atcagaagtgttgtccatttgaacaagtagagctcagcaaa 560
>gb|AV547198.1|AV547198 AV547198 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL27a09F 3', mRNA sequence
Length = 541
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 364 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 423
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 424 gagtggtccccatgattggtatccactgttgatagcataagagactcc 471
>gb|AY045960.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit
(At5g05170) mRNA, partial cds
Length = 574
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 181 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 122
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 121 gagtggtccccatgattggtatccactgttgatagcataagagactcc 74
>emb|BX833092.1|CNS0A0FM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL33ZG12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 670
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 310 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 251
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 250 gagtggtccccatgattggtatccactgttgatagcataagagactcc 203
Score = 56.0 bits (28), Expect = 3e-005
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 156 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 97
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 96 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 37
Query: 805 aacacagc 812
||||||||
Sbjct: 36 aacacagc 29
>emb|BX833785.1|CNS0A0C4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL77ZA04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 509
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 146 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 87
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 86 gagtggtccccatgattggtatccactgttgatagcataagagactcc 39
>gb|AV523533.1|AV523533 AV523533 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL31a04F 3', mRNA
sequence
Length = 433
Score = 85.7 bits (43), Expect = 4e-014
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 333 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 392
Query: 591 tagtggaccccatgattggtagccactgttgatagcata 629
||||| |||||||||||||| |||||||||||||||||
Sbjct: 393 gagtggtccccatgattggtatccactgttgatagcata 431
>gb|AV566035.1|AV566035 AV566035 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ235d12F 3', mRNA sequence
Length = 545
Score = 85.7 bits (43), Expect = 4e-014
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
|||||||||| ||||||||||||||||| |||||||||||||| || ||||||| | ||
Sbjct: 445 catcatcatctgttgcctttgatgtgacggtgaagtttgtgtcaatgcctgctaagattt 504
Query: 791 ttaagagaccttggaacacagcaaagagatg 821
| | ||||||||||| || |||||||||||
Sbjct: 505 tgaggagaccttggacaaccgcaaagagatg 535
>gb|AF267742.1|AF267742 Arabidopsis thaliana cellulose synthase catalytic subunit (IRX1)
mRNA, complete cds
Length = 2958
Score = 85.7 bits (43), Expect = 4e-014
Identities = 112/135 (82%)
Strand = Plus / Minus
Query: 1733 cctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaag 1792
||||| || |||||||| || |||||||| ||||| || || ||||||||| ||| |||
Sbjct: 1625 cctgtaccaacataaactggaccttgaatcccatcaagccctctcatattaacatcgaag 1566
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
|| |||||||| ||||| |||||||||||| | ||| || ||||||||||| |||||
Sbjct: 1565 aaaacaatgttgcggttagcatatcgatcactcttgtcgattccatcaaatctctgtggg 1506
Query: 1853 aactgaacatagcaa 1867
||||||||| |||||
Sbjct: 1505 aactgaacaaagcaa 1491
Score = 58.0 bits (29), Expect = 9e-006
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || ||||||| ||| | || |||||||| ||
Sbjct: 2585 gatgtgactgtgaaatttgtgtcgagaccagctagcattttgaggaatccttggaaaacg 2526
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 2525 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 2473
Score = 52.0 bits (26), Expect = 5e-004
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || ||||| ||||| || | || || || ||||||||||| ||
Sbjct: 2073 atgcatcttgaaacccgtcaaaatgtcttccgtgatcgacccgtaaatccatccgatttc 2014
Query: 1320 tttcccccattctgtttt 1337
||| |||||||| |||||
Sbjct: 2013 ttttccccattcggtttt 1996
Score = 42.1 bits (21), Expect = 0.53
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 2246 aactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttg 2298
||||||||||| || || ||||| || | | |||||||||||||||||||||
Sbjct: 1112 aactcttcataatctcttttcatggctctacgttctttcacaaaagaaggttg 1060
>gb|AY099636.1| Arabidopsis thaliana cellulose synthase-like protein (At4g18780)
mRNA, complete cds
Length = 3109
Score = 85.7 bits (43), Expect = 4e-014
Identities = 112/135 (82%)
Strand = Plus / Minus
Query: 1733 cctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaag 1792
||||| || |||||||| || |||||||| ||||| || || ||||||||| ||| |||
Sbjct: 1692 cctgtaccaacataaactggaccttgaatcccatcaagccctctcatattaacatcgaag 1633
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
|| |||||||| ||||| |||||||||||| | ||| || ||||||||||| |||||
Sbjct: 1632 aaaacaatgttgcggttagcatatcgatcactcttgtcgattccatcaaatctctgtggg 1573
Query: 1853 aactgaacatagcaa 1867
||||||||| |||||
Sbjct: 1572 aactgaacaaagcaa 1558
Score = 52.0 bits (26), Expect = 5e-004
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 2624 tcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaagac 2683
|||| ||||||||| ||||| |||||| |||| || ||||||||||| | | ||||||
Sbjct: 801 tcgatgtaagtttctcggttaataggagaccatttagggaactgatccaacacccaagaa 742
Query: 2684 aaagcaaaccaaacttcacaaataacagat 2713
| ||||||||||| ||||| || ||||||
Sbjct: 741 acagcaaaccaaatctcacatatcacagat 712
Score = 50.1 bits (25), Expect = 0.002
Identities = 91/113 (80%)
Strand = Plus / Minus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || || |||| ||| | || |||||||| ||
Sbjct: 2652 gatgtgactgtgaaatttgtgtcgagaccagcgagcattttgaggaatccttggaaaacg 2593
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 2592 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 2540
Score = 44.1 bits (22), Expect = 0.13
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || ||||| ||||| || | || || || |||||||| || ||
Sbjct: 2140 atgcatcttgaaacccgtcaaaatgtcttcggtgatcgacccgtaaatccatcctatttc 2081
Query: 1320 tttcccccattctgtttt 1337
||| |||||||| |||||
Sbjct: 2080 ttttccccattcagtttt 2063
Score = 42.1 bits (21), Expect = 0.53
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 2246 aactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttg 2298
||||||||||| || || ||||| || | | |||||||||||||||||||||
Sbjct: 1179 aactcttcataatctcttttcatggctctacgttctttcacaaaagaaggttg 1127
>emb|BX822015.1|CNS0AAAJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL92ZB06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 775
Score = 85.7 bits (43), Expect = 4e-014
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| ||||| ||||| || || ||||| ||||| || ||||| ||||| | ||
Sbjct: 280 agaagagacgtccatttgaagacgtaaagctctgcaaagtctccatcttcatctgaggct 221
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||||||||| |||||||||||||| |||||||| | ||||| | |||||||| ||
Sbjct: 220 tttgatgtgactgtgaagtttgtgtctatccctgcaaaaactttgagtagaccttgaaaa 161
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacca 866
|| ||||| ||||| || || || ||||| || |||||||||||||| || ||||||||
Sbjct: 160 actgcaaaaagatgagccgatgttccaccgattacccaaaactgctcgttcctccacca 102
>ref|NM_117994.2| Arabidopsis thaliana CESA8 (CELLULASE SYNTHASE 8); cellulose
synthase/ transferase, transferring glycosyl groups
AT4G18780 (CESA8) mRNA, complete cds
Length = 3217
Score = 85.7 bits (43), Expect = 4e-014
Identities = 112/135 (82%)
Strand = Plus / Minus
Query: 1733 cctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaag 1792
||||| || |||||||| || |||||||| ||||| || || ||||||||| ||| |||
Sbjct: 1692 cctgtaccaacataaactggaccttgaatcccatcaagccctctcatattaacatcgaag 1633
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
|| |||||||| ||||| |||||||||||| | ||| || ||||||||||| |||||
Sbjct: 1632 aaaacaatgttgcggttagcatatcgatcactcttgtcgattccatcaaatctctgtggg 1573
Query: 1853 aactgaacatagcaa 1867
||||||||| |||||
Sbjct: 1572 aactgaacaaagcaa 1558
Score = 52.0 bits (26), Expect = 5e-004
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 2624 tcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaagac 2683
|||| ||||||||| ||||| |||||| |||| || ||||||||||| | | ||||||
Sbjct: 801 tcgatgtaagtttctcggttaataggagaccatttagggaactgatccaacacccaagaa 742
Query: 2684 aaagcaaaccaaacttcacaaataacagat 2713
| ||||||||||| ||||| || ||||||
Sbjct: 741 acagcaaaccaaatctcacatatcacagat 712
Score = 50.1 bits (25), Expect = 0.002
Identities = 91/113 (80%)
Strand = Plus / Minus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || || |||| ||| | || |||||||| ||
Sbjct: 2652 gatgtgactgtgaaatttgtgtcgagaccagcgagcattttgaggaatccttggaaaacg 2593
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 2592 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 2540
Score = 44.1 bits (22), Expect = 0.13
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || ||||| ||||| || | || || || |||||||| || ||
Sbjct: 2140 atgcatcttgaaacccgtcaaaatgtcttcggtgatcgacccgtaaatccatcctatttc 2081
Query: 1320 tttcccccattctgtttt 1337
||| |||||||| |||||
Sbjct: 2080 ttttccccattcagtttt 2063
Score = 42.1 bits (21), Expect = 0.53
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 2246 aactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttg 2298
||||||||||| || || ||||| || | | |||||||||||||||||||||
Sbjct: 1179 aactcttcataatctcttttcatggctctacgttctttcacaaaagaaggttg 1127
>emb|AL758408.1| Arabidopsis thaliana T-DNA flanking sequence GK-158D06-013215,
genomic survey sequence
Length = 318
Score = 83.8 bits (42), Expect = 2e-013
Identities = 165/206 (80%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| ||| ||||| |||| || || || ||||| |
Sbjct: 95 atcagaagtgttgtccatttgaacaaatagagctctacaaagtctccgtcttcatctgaa 154
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 155 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 214
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|||||||| || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 215 aacacagcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 274
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 275 cattcgtctatgcctacgccactcca 300
>emb|BX948437.1| Arabidopsis thaliana T-DNA flanking sequence GK-789H12-024934,
genomic survey sequence
Length = 321
Score = 83.8 bits (42), Expect = 2e-013
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 1168 acttggttgagacgatcagaaagattaattggagcagaacccttgaagcaaggccgaagt 1227
|||||||| | ||||||||||||||| ||||||||||| |||||||| ||| || |
Sbjct: 29 acttggttcaaacgatcagaaagattgattggagcagatcccttgaacgcagggcgtgga 88
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
|| |||||||||| ||||||||||| | |||||||||||||| ||||| | |||||||
Sbjct: 89 ggattgcagtagatcgatatccaaccccgggcatgcatcttgaacccagtaagaatatct 148
Query: 1288 tc 1289
||
Sbjct: 149 tc 150
>gb|T20782.1|T20782 2790 Lambda-PRL2 Arabidopsis thaliana cDNA clone 92K17T7, mRNA
sequence
Length = 352
Score = 83.8 bits (42), Expect = 2e-013
Identities = 179/227 (78%)
Strand = Plus / Plus
Query: 1982 acagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcct 2041
||||| ||||| || ||||| |||||||| || |||||||| |||||||| || || ||
Sbjct: 114 acagcagatacacggatcaatgcattcatagctccagcctttttgtggtgttgaaatcca 173
Query: 2042 ggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagc 2101
|||| |||||||| ||||||||| | || | |||| |||||| ||| | || || ||
Sbjct: 174 ggccgcttttcacnagaaacatagatgagtctaggcagctcatttccancggtatccaga 233
Query: 2102 ccaccactgtggcccaagaatacttggatcattccnggatgatctctagggttattccca 2161
|| ||||| ||||| ||||| || || | || ||| ||||||||||||| ||| || |||
Sbjct: 234 cccccactatggcctaagaacacctgtancantccaggatgatctctagtgttgttacca 293
Query: 2162 ggccanggagtgccatcagccatggtccagccctcctcaggtatttt 2208
| ||| ||||| ||||| ||| |||||||| || ||||| |||||
Sbjct: 294 gnccagggagtaccatcctgcattgtccagccttcttcagggatttt 340
>gb|AI994106.1|AI994106 701498975 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701498975, mRNA sequence
Length = 534
Score = 83.8 bits (42), Expect = 2e-013
Identities = 165/206 (80%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||| ||||||| || ||||||||||| || || || ||||| |
Sbjct: 366 atcagaagtgttgtccatttgaacaagtagagctcagcaaagtctccgtcttcatctgaa 307
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|| ||||| || || |||||||||||||| || || || || ||||| | || ||||||
Sbjct: 306 gcttttgaggtaactgtgaagtttgtgtcaataccggcaaggactttgaggataccttga 247
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
||||| || || | ||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 246 aacacggcgaataaatgagcggatactccaccaatgacccaaaactgctcgtttctccac 187
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || ||||| || ||||||||
Sbjct: 186 cattcgtctatgcctacgccactcca 161
Score = 79.8 bits (40), Expect = 2e-012
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||| | |||||||||| ||| || ||
Sbjct: 520 acccttgaggaaagggtacaagtgaacaatcacccaaaaggcaaagaacaacttgccaaa 461
Query: 591 tagtggaccccatgattggtagccactgttgatagcatacgacactcc 638
||||| |||||||||||||| ||||||||||||||||| || |||||
Sbjct: 460 gagtggtccccatgattggtatccactgttgatagcataagagactcc 413
>gb|AV536569.1|AV536569 AV536569 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0292R 5', mRNA
sequence
Length = 396
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 367 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 308
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 307 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 248
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 247 cgtttctccaccaatc 232
>gb|AF375439.1| Arabidopsis thaliana AT5g64740/MVP7_7 mRNA, complete cds
Length = 1492
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 997 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 938
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 937 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 878
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 877 cgtttctccaccaatc 862
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 629 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 570
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 569 cgaagaacttgatggagacgatccgaaagattgattggagc 529
>gb|AY143957.1| Arabidopsis thaliana At5g64740/MVP7_7 mRNA, complete cds
Length = 1101
Score = 79.8 bits (40), Expect = 2e-012
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 751 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 692
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||| ||||| ||||| || ||||||||||||||||| |
Sbjct: 691 ggagaccttggaagagagcaaacagatgcgcagaaacacctccaatgacccaaaactgtt 632
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 631 cgtttctccaccaatc 616
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 383 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 324
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 323 cgaagaacttgatggagacgatccgaaagattgattggagc 283
>gb|BH748699.1|BH748699 SALK_046453.54.75.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_046453.54.75.x,
DNA sequence
Length = 444
Score = 77.8 bits (39), Expect = 1e-011
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
|||||||||||||||||||| ||||||| || |||||| | |||| ||| ||||||||
Sbjct: 258 tccatcatgaaacacatagcttctctaattgccttgctgttgttgatgtaatgatcacag 317
Query: 1949 tccacattaagaagataag 1967
|||||||||||||| ||||
Sbjct: 318 tccacattaagaaggtaag 336
>gb|AV523143.1|AV523143 AV523143 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL17h06F 3', mRNA
sequence
Length = 385
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 284 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 343
Query: 591 tagtggaccccatgattggtagccactgttgatagcata 629
||||| |||||||||||| | |||||||||||||||||
Sbjct: 344 gagtggtccccatgattggcatccactgttgatagcata 382
>gb|AV528856.1|AV528856 AV528856 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL21a10R 5', mRNA
sequence
Length = 352
Score = 75.8 bits (38), Expect = 4e-011
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 2747 tgagttatacgatattgaaagaagaaacataggatgataagccggagaacaatcacgatc 2806
|||||| |||||||||| ||||||||||| | ||||||||||||||||| |||||| | |
Sbjct: 282 tgagttgtacgatattgcaagaagaaacacaagatgataagccggagaataatcacaacc 223
Query: 2807 cgataa 2812
||||||
Sbjct: 222 cgataa 217
>gb|BP841009.1|BP841009 BP841009 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-31-O12 5',
mRNA sequence
Length = 393
Score = 75.8 bits (38), Expect = 4e-011
Identities = 119/146 (81%)
Strand = Plus / Minus
Query: 747 ctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaa 806
|||| ||||||| |||||||||||||| || ||| || | ||| | |||||||||||
Sbjct: 393 ctttcatgtgacggtgaagtttgtgtcaatgccttttaatattttgaggagaccttggac 334
Query: 807 cacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacca 866
|| |||||||||| || ||| | || ||||||||||| || ||||| |||||||||||
Sbjct: 333 aaccccaaagagatgagctgagattcctccaatgacccagaattgctcgtttctccacca 274
Query: 867 atcctcaatgccaacaccactccatc 892
|||||||||| ||| || |||||||
Sbjct: 273 ttcctcaatgctaactccgctccatc 248
>gb|AY059858.1| Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A)
(At4g39350; T22F8.250) mRNA, complete cds
Length = 1699
Score = 75.8 bits (38), Expect = 4e-011
Identities = 130/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|||||||| || ||||| ||||| ||||| |||||||||||||| |||| ||| ||||||
Sbjct: 159 ggtccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggttt 100
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
| |||| |||||| || || ||||||||||| || |||||||||||||| ||| |
Sbjct: 99 gagtatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacataacaaact 40
Query: 1871 ttcctt-cctagtgctggatccatcatgaaacacatag 1907
||| || || | ||| || |||||||||||||||||||
Sbjct: 39 ttctttcccgattgc-gggtccatcatgaaacacatag 3
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||||||||| || || ||||| ||||| ||||||||
Sbjct: 649 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatctc 590
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 589 ttttccccattcggttttatc 569
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 1068 acccaaaactgctcgtttctccaccaatc 1040
>gb|CC887589.1|CC887589 SALK_150405.56.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_150405.56.00.x,
DNA sequence
Length = 357
Score = 73.8 bits (37), Expect = 1e-010
Identities = 133/165 (80%)
Strand = Plus / Plus
Query: 2648 ggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaata 2707
|||||||| |||||||||||||| ||||||||||| || |||||||| | |||||||||
Sbjct: 31 ggataccattttgggaactgatcaagaagccaagaaaaggcaaaccagatctcacaaata 90
Query: 2708 acagatacaagccacaacccataagcatcttccactggatgagttatacgatattgaaag 2767
|| || | ||||| |||| ||||||| ||| ||||||||| ||||||| || |||
Sbjct: 91 actgaggtcaaccacagggcatatgcatctttcacgggatgagttgtacgataatgcaag 150
Query: 2768 aagaaacataggatgataagccggagaacaatcacgatccgataa 2812
|||| | | ||||| ||||||||||| ||||| || ||||||
Sbjct: 151 aagactcccaaaatgatgagccggagaactatcactatacgataa 195
>gb|BE521782.1|BE521782 M21E12STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M21E12 5', mRNA sequence
Length = 338
Score = 73.8 bits (37), Expect = 1e-010
Identities = 145/181 (80%)
Strand = Plus / Minus
Query: 1685 gtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttcccaca 1744
||||| ||||||||||| ||||| | ||||||||||| ||||| || || || ||||||
Sbjct: 188 gtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtacccaca 129
Query: 1745 taaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttc 1804
|| || || || || || ||||| | || ||||| |||||||| || ||||| || |||
Sbjct: 128 tatactggaccgtggataccatccaaccctttcatgttaatatcgaaaaagactatattc 69
Query: 1805 cggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatag 1864
| ||| ||||||||||| ||||| || ||||| ||||| | ||| || ||||| ||||||
Sbjct: 68 ctgttggcatatcgatcgtgcaaatcaataccgtcaaaacgttgagggaactggacatag 9
Query: 1865 c 1865
|
Sbjct: 8 c 8
>gb|BP617268.1|BP617268 BP617268 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-23-E02 3',
mRNA sequence
Length = 461
Score = 73.8 bits (37), Expect = 1e-010
Identities = 92/109 (84%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 350 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 409
Query: 591 tagtggacccca-tgattggtagccactgttgatagcatacgacactcc 638
||||| ||||| ||||||||| ||||||||||||||||| || |||||
Sbjct: 410 gagtggtccccactgattggtatccactgttgatagcataagagactcc 458
>gb|BP819896.1|BP819896 BP819896 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-52-M12 5',
mRNA sequence
Length = 386
Score = 73.8 bits (37), Expect = 1e-010
Identities = 135/165 (81%), Gaps = 2/165 (1%)
Strand = Plus / Minus
Query: 1168 acttggttgagacgatcagaaagattaattggagcagaacccttgaagcaaggccgaagt 1227
|||||||| | ||||||||||||||| ||||| ||||| |||||||| ||| || |
Sbjct: 329 acttggttcaaacgatcagaaagattgattggtgcagatcccttgaacgcagggcgtgga 270
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaa-accagttaaaatatc 1286
|| |||||||||| ||||||||||| | |||||||||||||| ||||| | ||||||
Sbjct: 269 ggattgcagtagatcgatatccaaccccgggcatgcatcttgaagcccagtaagaatatc 210
Query: 1287 ttcagtaacagagccatatatccatccgatctctttcccccattc 1331
||| || || || ||||| ||||| || |||||||| ||||||||
Sbjct: 209 ttccgtcacgga-ccatagatccaaccaatctctttgccccattc 166
>gb|AY093308.1| Arabidopsis thaliana cellulose synthase catalytic subunit (At4g39350)
mRNA, complete cds
Length = 1587
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||||||||| || || ||||| ||||| ||||||||
Sbjct: 645 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatctc 586
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 585 ttttccccattcggttttatc 565
Score = 73.8 bits (37), Expect = 1e-010
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|||||||| || ||||| ||||| ||||| |||||||||||||| |||| ||| ||||||
Sbjct: 155 ggtccttgtatcccatcaagacctttcatgttaatatcaaagaacacaacgttacggttt 96
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacata 1863
| |||| |||||| || || ||||||||||| || ||||||||||||||
Sbjct: 95 gagtatctatcatgtctatcaatcccatcaaatctctgcggaaactgaacata 43
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatc 869
|||||||||||||| ||||||||||||||
Sbjct: 1064 acccaaaactgctcgtttctccaccaatc 1036
>gb|AV830043.1|AV830043 AV830043 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-61-B05 5', mRNA
sequence
Length = 593
Score = 71.9 bits (36), Expect = 6e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 2579 aactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttca 2638
||||| ||||||||||| || | ||||||||| || ||||| || |||||||| ||||||
Sbjct: 363 aactgtgatggctcaccttcacgatcatatcttaaagcaagcctgtcgaggtaggtttca 304
Query: 2639 cggttgataggataccactttgggaactgatc 2670
||||| | |||| ||||||| || ||||||||
Sbjct: 303 cggttcacaggaaaccacttgggaaactgatc 272
Score = 63.9 bits (32), Expect = 1e-007
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 574 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 515
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| |||||||| | ||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 514 tgataacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtc 455
Query: 2488 cacagcaagaat 2499
||||| |||||
Sbjct: 454 aacagccagaat 443
>gb|AV529432.1|AV529432 AV529432 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL36f12R 5', mRNA
sequence
Length = 530
Score = 71.9 bits (36), Expect = 6e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 2579 aactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttca 2638
||||| ||||||||||| || | ||||||||| || ||||| || |||||||| ||||||
Sbjct: 358 aactgtgatggctcaccttcacgatcatatcttaaagcaagcctgtcgaggtaggtttca 299
Query: 2639 cggttgataggataccactttgggaactgatc 2670
||||| | |||| ||||||| || ||||||||
Sbjct: 298 cggttcacaggaaaccacttgggaaactgatc 267
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
|||||||| | ||| ||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 505 aacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtcaaca 446
Query: 2492 gcaagaat 2499
|| |||||
Sbjct: 445 gccagaat 438
>gb|AV529461.1|AV529461 AV529461 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL37e09R 5', mRNA
sequence
Length = 532
Score = 71.9 bits (36), Expect = 6e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 2579 aactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttca 2638
||||| ||||||||||| || | ||||||||| || ||||| || |||||||| ||||||
Sbjct: 358 aactgtgatggctcaccttcacgatcatatcttaaagcaagcctgtcgaggtaggtttca 299
Query: 2639 cggttgataggataccactttgggaactgatc 2670
||||| | |||| ||||||| || ||||||||
Sbjct: 298 cggttcacaggaaaccacttgggaaactgatc 267
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
|||||||| | ||| ||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 505 aacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtcaaca 446
Query: 2492 gcaagaat 2499
|| |||||
Sbjct: 445 gccagaat 438
>gb|H36425.1|H36425 14093 Lambda-PRL2 Arabidopsis thaliana cDNA clone 172D1T7, mRNA
sequence
Length = 421
Score = 69.9 bits (35), Expect = 2e-009
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 832 ccaccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactcca 890
||||||||||||||||||||||| ||||||||||| || || ||||| || ||||||||
Sbjct: 217 ccaccaatgacccaaaactgctcgtttctccaccattcgtctatgcctacgccactcca 159
>gb|AV562949.1|AV562949 AV562949 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ178g04F 3', mRNA sequence
Length = 561
Score = 69.9 bits (35), Expect = 2e-009
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 402 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 461
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||| || | |||| ||||| |||| |||||||||||| ||| || |||||
Sbjct: 462 gttcggttttgtcttcccaacagacctttcaagaaagggtagagatgggcaataacccat 521
Query: 568 attgcaaagaacagcttcccgaatagtggacccca 602
| || ||||| ||||||||||| || ||||||||
Sbjct: 522 aaggcgaagaagagcttcccgaaaagcggacccca 556
>gb|AF458083.1| Arabidopsis thaliana cellulose synthase (IRX5) mRNA, complete cds
Length = 3168
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||||||||||||||| || || |||| |||| ||||||||||| ||||||||| ||
Sbjct: 1121 aagtaaaactctggagctcttggctcaacattgtacttcttgcaaaacggaacccatctc 1062
Query: 2393 cttgcaaactc 2403
|||||||||||
Sbjct: 1061 cttgcaaactc 1051
Score = 56.0 bits (28), Expect = 3e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||||||||| ||||| || |||||||| || ||||||| || |||| || |||||
Sbjct: 1724 catcctgttcctacatagactggtccttggattccatctaagcctctcatgtttatatcg 1665
Query: 1790 aagaagacaatgttccggtttgcatatcgatc 1821
|||||||| ||||| | |||||| ||||||||
Sbjct: 1664 aagaagacgatgtttctgtttgcgtatcgatc 1633
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatc 2568
||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 926 ggaggttccttgagcggatccactgtactgacaaacacatc 886
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 1451 gcattcatggctccagctttcttgtggtg 1423
Score = 40.1 bits (20), Expect = 2.1
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 2627 aggtaagtttcacggttgataggataccactttgggaactgatc 2670
||||| ||||| ||||| || ||| |||| ||||||||||||||
Sbjct: 827 aggtaggtttctcggttaattggaaaccattttgggaactgatc 784
>gb|BT005710.1| Arabidopsis thaliana clone RAFL15-30-K05 (R50150) putative cellulose
synthase catalytic subunit (At5g44030) mRNA, complete cds
Length = 3377
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||||||||||||||| || || |||| |||| ||||||||||| ||||||||| ||
Sbjct: 1189 aagtaaaactctggagctcttggctcaacattgtacttcttgcaaaacggaacccatctc 1130
Query: 2393 cttgcaaactc 2403
|||||||||||
Sbjct: 1129 cttgcaaactc 1119
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatc 2568
||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 994 ggaggttccttgagcggatccactgtactgacaaacacatc 954
Score = 48.1 bits (24), Expect = 0.009
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||||||||| ||||| || |||||||| || ||||||| || |||| || |||||
Sbjct: 1792 catcctgttcctacatagactggtccttggattccatctaagcctctcatgtttatatcg 1733
Query: 1790 aagaagacaatgttccggtttgcatatcgatc 1821
|||||||| ||||| | ||| || ||||||||
Sbjct: 1732 aagaagacgatgtttctgttggcgtatcgatc 1701
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 1519 gcattcatggctccagctttcttgtggtg 1491
Score = 40.1 bits (20), Expect = 2.1
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||| || |||||||| | || ||||||||||||||| || || |||||
Sbjct: 1393 atcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatc 1344
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1045 ggataaacaatggtgttgatgta 1067
||||||||||| |||||||||||
Sbjct: 2554 ggataaacaattgtgttgatgta 2532
>gb|BT006111.1| Arabidopsis thaliana clone U50150 putative cellulose synthase
catalytic subunit (At5g44030) mRNA, complete cds
Length = 3181
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||||||||||||||| || || |||| |||| ||||||||||| ||||||||| ||
Sbjct: 1118 aagtaaaactctggagctcttggctcaacattgtacttcttgcaaaacggaacccatctc 1059
Query: 2393 cttgcaaactc 2403
|||||||||||
Sbjct: 1058 cttgcaaactc 1048
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatc 2568
||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 923 ggaggttccttgagcggatccactgtactgacaaacacatc 883
Score = 48.1 bits (24), Expect = 0.009
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||||||||| ||||| || |||||||| || ||||||| || |||| || |||||
Sbjct: 1721 catcctgttcctacatagactggtccttggattccatctaagcctctcatgtttatatcg 1662
Query: 1790 aagaagacaatgttccggtttgcatatcgatc 1821
|||||||| ||||| | ||| || ||||||||
Sbjct: 1661 aagaagacgatgtttctgttggcgtatcgatc 1630
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 1448 gcattcatggctccagctttcttgtggtg 1420
Score = 40.1 bits (20), Expect = 2.1
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||| || |||||||| | || ||||||||||||||| || || |||||
Sbjct: 1322 atcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatc 1273
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1045 ggataaacaatggtgttgatgta 1067
||||||||||| |||||||||||
Sbjct: 2483 ggataaacaattgtgttgatgta 2461
>dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRH10
Length = 71522
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||||||||||||||| || || |||| |||| ||||||||||| ||||||||| ||
Sbjct: 46375 aagtaaaactctggagctcttggctcaacattgtacttcttgcaaaacggaacccatctc 46316
Query: 2393 cttgcaaactc 2403
|||||||||||
Sbjct: 46315 cttgcaaactc 46305
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatc 2568
||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 46180 ggaggttccttgagcggatccactgtactgacaaacacatc 46140
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 46872 gcattcatggctccagctttcttgtggtg 46844
Score = 40.1 bits (20), Expect = 2.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatcta 1769
||||||||||| ||||| || |||||||| || |||||||
Sbjct: 47295 catcctgttcctacatagactggtccttggattccatcta 47256
Score = 40.1 bits (20), Expect = 2.1
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||| || |||||||| | || ||||||||||||||| || || |||||
Sbjct: 46652 atcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatc 46603
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1045 ggataaacaatggtgttgatgta 1067
||||||||||| |||||||||||
Sbjct: 48618 ggataaacaattgtgttgatgta 48596
>ref|NM_123770.2| Arabidopsis thaliana CESA4 (CELLULASE SYNTHASE 4); transferase,
transferring glycosyl groups AT5G44030 (CESA4) mRNA,
complete cds
Length = 3745
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||||||||||||||| || || |||| |||| ||||||||||| ||||||||| ||
Sbjct: 1186 aagtaaaactctggagctcttggctcaacattgtacttcttgcaaaacggaacccatctc 1127
Query: 2393 cttgcaaactc 2403
|||||||||||
Sbjct: 1126 cttgcaaactc 1116
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatc 2568
||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 991 ggaggttccttgagcggatccactgtactgacaaacacatc 951
Score = 48.1 bits (24), Expect = 0.009
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||||||||| ||||| || |||||||| || ||||||| || |||| || |||||
Sbjct: 1789 catcctgttcctacatagactggtccttggattccatctaagcctctcatgtttatatcg 1730
Query: 1790 aagaagacaatgttccggtttgcatatcgatc 1821
|||||||| ||||| | ||| || ||||||||
Sbjct: 1729 aagaagacgatgtttctgttggcgtatcgatc 1698
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtg 2031
||||||||||| ||||| |||||||||||
Sbjct: 1516 gcattcatggctccagctttcttgtggtg 1488
Score = 40.1 bits (20), Expect = 2.1
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||||| || |||||||| | || ||||||||||||||| || || |||||
Sbjct: 1390 atcatcccgggatgatcacgagtgttattcccaggccatggtgtaccatc 1341
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1045 ggataaacaatggtgttgatgta 1067
||||||||||| |||||||||||
Sbjct: 2551 ggataaacaattgtgttgatgta 2529
>emb|CR396441.1| Arabidopsis thaliana T-DNA flanking sequence GK-333E05-016060,
genomic survey sequence
Length = 359
Score = 67.9 bits (34), Expect = 9e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 2399 aactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaaca 2458
||||| || |||||||| || ||||||||||| | |||| ||||||||||||| |||||
Sbjct: 40 aactccgccgtttcagaaagggcttcaaaagttagcatatctgaaccgtcatccgaaacg 99
Query: 2459 taacatgatactttgtcaacagggtaatccacagcaag 2496
||||| | ||||| || || ||||| |||||||||||
Sbjct: 100 taacacgcaactttatccactgggtagtccacagcaag 137
>emb|CR401305.1| Arabidopsis thaliana T-DNA flanking sequence GK-844F11-025726,
genomic survey sequence
Length = 461
Score = 67.9 bits (34), Expect = 9e-009
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 850 tgctcatttctccaccaatcctcaatgccaacaccactccatcgaagctccaaaatacca 909
||||| ||||||||||| |||| ||||| ||||| |||||||| |||||||| |||||
Sbjct: 461 tgctcgtttctccaccagtcctggatgccgacacctctccatcggagctccaatataccc 402
Query: 910 gtggcgaagatagaagcaaaaagcaggatgaagaacgccccagcataatt 959
||||| ||||| || ||||| | || || |||||| ||||||||||||
Sbjct: 401 gtggcaaagatggaggcaaacataagaataaagaacatcccagcataatt 352
>gb|BH753096.1|BH753096 SALK_019756.53.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_019756.53.00.x,
DNA sequence
Length = 314
Score = 65.9 bits (33), Expect = 4e-008
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || | || | ||||| ||||||||||| | ||||||
Sbjct: 183 taaccataccatataggacaatgccgactgaagagaatctcaactgaacctaaagcccac 242
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagcagaacccttgaa 1214
| | ||||||||| |||||||| |||||||| || |||||| ||||||||||
Sbjct: 243 ctcagcacttggttcagacgatctgaaagattgataggagcataacccttgaa 295
>gb|B24204.1|B24204 F19F17TF IGF Arabidopsis thaliana genomic clone F19F17, DNA
sequence
Length = 598
Score = 63.9 bits (32), Expect = 1e-007
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 798 accttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatt 857
|||||| |||| |||||| ||||| | |||| || |||||||||||||||||||| ||
Sbjct: 43 accttgaaacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtt 102
Query: 858 tctccaccaatc 869
||||||||||||
Sbjct: 103 tctccaccaatc 114
>gb|BH611908.1|BH611908 SALK_031874 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_031874, DNA sequence
Length = 212
Score = 63.9 bits (32), Expect = 1e-007
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 798 accttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatt 857
|||||| |||| |||||| ||||| | |||| || |||||||||||||||||||| ||
Sbjct: 97 accttgaaacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgtt 38
Query: 858 tctccaccaatc 869
||||||||||||
Sbjct: 37 tctccaccaatc 26
>gb|AV537459.1|AV537459 AV537459 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ06e01F 3', mRNA sequence
Length = 570
Score = 63.9 bits (32), Expect = 1e-007
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 354 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 413
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagag 551
|| ||||| || | |||| ||||| |||| ||||||||||||
Sbjct: 414 gttcggttttgtcttcccaacagacctttcaagaaagggtagag 457
>gb|AV545907.1|AV545907 AV545907 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL05b03F 3', mRNA sequence
Length = 482
Score = 63.9 bits (32), Expect = 1e-007
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 377 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 436
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagag 551
|| ||||| || | |||| ||||| |||| ||||||||||||
Sbjct: 437 gttcggttttgtcttcccaacagacctttcaagaaagggtagag 480
>gb|AV546317.1|AV546317 AV546317 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL12a02F 3', mRNA sequence
Length = 547
Score = 63.9 bits (32), Expect = 1e-007
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 428 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 487
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagag 551
|| ||||| || | |||| ||||| |||| ||||||||||||
Sbjct: 488 gttcggttttgtcttcccaacagacctttcaagaaagggtagag 531
>gb|AV560817.1|AV560817 AV560817 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ141b11F 3', mRNA sequence
Length = 553
Score = 63.9 bits (32), Expect = 1e-007
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 406 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 465
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagag 551
|| ||||| || | |||| ||||| |||| ||||||||||||
Sbjct: 466 gttcggttttgtcttcccaacagacctttcaagaaagggtagag 509
>gb|B67810.1|B67810 T24H20TR TAMU Arabidopsis thaliana genomic clone T24H20, DNA sequence
Length = 554
Score = 60.0 bits (30), Expect = 2e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| |||||||| ||||| |||||||||||| | ||| || ||||||||||| |||
Sbjct: 378 aagaaaacaatgttgcggttagcatatcgatcactcttgtcgattccatcaaatctctgt 437
Query: 1850 ggaaactgaacatagcaa 1867
|| ||||||||| |||||
Sbjct: 438 gggaactgaacaaagcaa 455
>gb|BP832279.1|BP832279 BP832279 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-92-A12 5',
mRNA sequence
Length = 364
Score = 60.0 bits (30), Expect = 2e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1258 gcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatc 1317
|||||||||||||| ||||| | ||||||||| || || || ||||| ||||| || |||
Sbjct: 238 gcatgcatcttgaacccagtaagaatatcttccgtcacggaaccatagatccaaccaatc 179
Query: 1318 tctttcccccattc 1331
||||| ||||||||
Sbjct: 178 tctttgccccattc 165
>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
Length = 94301
Score = 60.0 bits (30), Expect = 2e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| |||||||| ||||| |||||||||||| | ||| || ||||||||||| |||
Sbjct: 73332 aagaaaacaatgttgcggttagcatatcgatcactcttgtcgattccatcaaatctctgt 73391
Query: 1850 ggaaactgaacatagcaa 1867
|| ||||||||| |||||
Sbjct: 73392 gggaactgaacaaagcaa 73409
Score = 52.0 bits (26), Expect = 5e-004
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 2624 tcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaagac 2683
|||| ||||||||| ||||| |||||| |||| || ||||||||||| | | ||||||
Sbjct: 74492 tcgatgtaagtttctcggttaataggagaccatttagggaactgatccaacacccaagaa 74551
Query: 2684 aaagcaaaccaaacttcacaaataacagat 2713
| ||||||||||| ||||| || ||||||
Sbjct: 74552 acagcaaaccaaatctcacatatcacagat 74581
Score = 50.1 bits (25), Expect = 0.002
Identities = 91/113 (80%)
Strand = Plus / Plus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || || |||| ||| | || |||||||| ||
Sbjct: 72077 gatgtgactgtgaaatttgtgtcgagaccagcgagcattttgaggaatccttggaaaacg 72136
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 72137 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 72189
Score = 42.1 bits (21), Expect = 0.53
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2278 ttctttcacaaaagaaggttg 2298
|||||||||||||||||||||
Sbjct: 74055 ttctttcacaaaagaaggttg 74075
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
Length = 199075
Score = 60.0 bits (30), Expect = 2e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| |||||||| ||||| |||||||||||| | ||| || ||||||||||| |||
Sbjct: 92613 aagaaaacaatgttgcggttagcatatcgatcactcttgtcgattccatcaaatctctgt 92672
Query: 1850 ggaaactgaacatagcaa 1867
|| ||||||||| |||||
Sbjct: 92673 gggaactgaacaaagcaa 92690
Score = 52.0 bits (26), Expect = 5e-004
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 2624 tcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaagac 2683
|||| ||||||||| ||||| |||||| |||| || ||||||||||| | | ||||||
Sbjct: 93773 tcgatgtaagtttctcggttaataggagaccatttagggaactgatccaacacccaagaa 93832
Query: 2684 aaagcaaaccaaacttcacaaataacagat 2713
| ||||||||||| ||||| || ||||||
Sbjct: 93833 acagcaaaccaaatctcacatatcacagat 93862
Score = 50.1 bits (25), Expect = 0.002
Identities = 91/113 (80%)
Strand = Plus / Plus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || || |||| ||| | || |||||||| ||
Sbjct: 91358 gatgtgactgtgaaatttgtgtcgagaccagcgagcattttgaggaatccttggaaaacg 91417
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 91418 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 91470
Score = 42.1 bits (21), Expect = 0.53
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2278 ttctttcacaaaagaaggttg 2298
|||||||||||||||||||||
Sbjct: 93336 ttctttcacaaaagaaggttg 93356
>gb|AQ967081.1|AQ967081 LERIP40TF LERG Arabidopsis thaliana genomic clone LERIP40, DNA
sequence
Length = 660
Score = 58.0 bits (29), Expect = 9e-006
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || ||||||| ||| | || |||||||| ||
Sbjct: 286 gatgtgactgtgaaatttgtgtcgagaccagctagcattttgaggaatccttggaaaacg 227
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 226 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 174
>gb|AQ967082.1|AQ967082 LERIP40TR LERG Arabidopsis thaliana genomic clone LERIP40, DNA
sequence
Length = 645
Score = 58.0 bits (29), Expect = 9e-006
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|||||||| ||||| |||||||||| || ||||||| ||| | || |||||||| ||
Sbjct: 370 gatgtgactgtgaaatttgtgtcgagaccagctagcattttgaggaatccttggaaaacg 429
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
||||||||||| || ||| || ||||| ||||||||||| || ||||||||
Sbjct: 430 gcaaagagatgagctgagacacctccaataacccaaaactgttcgtttctcca 482
>gb|BP582979.1|BP582979 BP582979 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-38-P11 3',
mRNA sequence
Length = 455
Score = 58.0 bits (29), Expect = 9e-006
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 531 acccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaa 590
|||||| ||||||||||| | ||| | |||||||||| |||||||||| ||| || ||
Sbjct: 369 acccttgaggaaagggtacaagtgaacaatcacccagaaggcaaagaacaacttaccaaa 428
Query: 591 tagtggaccccatgattggta 611
||||| ||||||||||||||
Sbjct: 429 gagtggtccccatgattggta 449
>gb|N96884.1|N96884 21830 Lambda-PRL1 Arabidopsis thaliana cDNA clone G6E2T7, mRNA
sequence
Length = 503
Score = 56.0 bits (28), Expect = 3e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 1896 tgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccacat 1955
|||||||||| || || |||||||||||||| | |||| |||||||| |||||| ||||
Sbjct: 345 tgaaacacattgcttccctaagagctttgctattgttgatgtagtgattacaatcgacat 286
Query: 1956 taagaagataag 1967
| ||||| ||||
Sbjct: 285 tcagaaggtaag 274
>gb|AV806728.1|AV806728 AV806728 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-47-L16 3',
mRNA sequence
Length = 408
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 340 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 399
Query: 508 gtgcggtt 515
|| |||||
Sbjct: 400 gttcggtt 407
>gb|AV439681.1|AV439681 AV439681 Arabidopsis thaliana above-ground organ two to six-week old
Arabidopsis thaliana cDNA clone APD10h12_f 3', mRNA
sequence
Length = 507
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
|||||||| | ||| ||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 375 aacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtcaaca 434
Query: 2492 gcaagaat 2499
|| |||||
Sbjct: 435 gccagaat 442
>gb|AV518616.1|AV518616 AV518616 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APD33h10F 3', mRNA
sequence
Length = 558
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
|||||||| | ||| ||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 370 aacatagcagcaccatcatcagaaacataacaggacaccttgtcaactgggtagtcaaca 429
Query: 2492 gcaagaat 2499
|| |||||
Sbjct: 430 gccagaat 437
>gb|AV544042.1|AV544042 AV544042 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ31f05F 3', mRNA sequence
Length = 457
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 384 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 443
Query: 508 gtgcggtt 515
|| |||||
Sbjct: 444 gttcggtt 451
>gb|AV545922.1|AV545922 AV545922 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL05e01F 3', mRNA sequence
Length = 499
Score = 56.0 bits (28), Expect = 3e-005
Identities = 86/104 (82%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||| ||||| |||
Sbjct: 386 acccaaagcaacgagaagatggaggcgagaagaacagaccatacaatgacaatggtgggt 445
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagag 551
|| ||||| |||| || | ||||| |||||||||||||||||
Sbjct: 446 gttcggtttggctttccaac-agacctttcaggaaagggtagag 488
>gb|BP608218.1|BP608218 BP608218 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-77-M21 3',
mRNA sequence
Length = 441
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 347 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 406
Query: 508 gtgcggtt 515
|| |||||
Sbjct: 407 gttcggtt 414
>gb|AY136423.1| Arabidopsis thaliana cellulose synthase catalytic subunit
(At5g09870) mRNA, complete cds
Length = 1490
Score = 56.0 bits (28), Expect = 3e-005
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| || ||||| || ||||||||||| || | || |||| || ||||
Sbjct: 850 catcatctgctgctttagatgtaactgtgaagtttgtctcaacaccggctaaaaccttta 791
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||||||||| || || || ||||| ||||||||||| |
Sbjct: 790 ggagaccttggaagagagcaaagagatgagctgaaacacctccaatcacccaaaactgtt 731
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 730 cgtttctccaccaatc 715
Score = 50.1 bits (25), Expect = 0.002
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||| || || ||||| || || ||||| || |||||
Sbjct: 324 atgcatcttgaaacccgtaaggatatcctcggtgacagaaccgtagatccacccaatctc 265
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 264 ttttccccattcggttttatc 244
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgct 1130
||||||||||| |||||||| ||||||||
Sbjct: 482 taaccataccaaataggacaatgtctgct 454
>gb|BT008832.1| Arabidopsis thaliana At5g09870 mRNA, complete cds
Length = 1041
Score = 56.0 bits (28), Expect = 3e-005
Identities = 109/136 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| || ||||| || ||||||||||| || | || |||| || ||||
Sbjct: 691 catcatctgctgctttagatgtaactgtgaagtttgtctcaacaccggctaaaaccttta 632
Query: 794 agagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgct 853
|||||||||||| | |||||||||||| || || || ||||| ||||||||||| |
Sbjct: 631 ggagaccttggaagagagcaaagagatgagctgaaacacctccaatcacccaaaactgtt 572
Query: 854 catttctccaccaatc 869
| ||||||||||||||
Sbjct: 571 cgtttctccaccaatc 556
Score = 50.1 bits (25), Expect = 0.002
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||||||||||||| || | ||||| || || ||||| || || ||||| || |||||
Sbjct: 165 atgcatcttgaaacccgtaaggatatcctcggtgacagaaccgtagatccacccaatctc 106
Query: 1320 tttcccccattctgttttatc 1340
||| |||||||| ||||||||
Sbjct: 105 ttttccccattcggttttatc 85
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgct 1130
||||||||||| |||||||| ||||||||
Sbjct: 323 taaccataccaaataggacaatgtctgct 295
>gb|BZ766414.1|BZ766414 SALK_137389.45.80.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_137389.45.80.x,
DNA sequence
Length = 176
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
||||||||||| |||||| ||| || | |||||||| ||||| ||||| | |||||||
Sbjct: 170 ggcatgcagtaaatggatcgccatccacgggcatgcattttgaacccagtcagaatatct 111
Query: 1288 tcagtaacagagccatatatccatccgatct 1318
|| || ||||| ||||| |||||||| ||||
Sbjct: 110 tctgtcacagaaccatagatccatccaatct 80
>gb|AV529949.1|AV529949 AV529949 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL53c11R 5', mRNA
sequence
Length = 303
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 2644 gataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcaca 2703
|||||| ||||| || ||||||||||| |||| ||| || | ||||||||| | |||||
Sbjct: 192 gatagggtaccatttagggaactgatcaagaacccatgaaacagcaaaccatatctcaca 133
Query: 2704 aataacagatacaagccacaacccataagcatctt 2738
|||||||| | ||||||||| |||| |||||||
Sbjct: 132 tataacagaaataagccacaaagcatatgcatctt 98
Score = 46.1 bits (23), Expect = 0.034
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2542 tggatccactgtactaacaaagacatc 2568
||||||||||||||||||||| |||||
Sbjct: 294 tggatccactgtactaacaaatacatc 268
>gb|AV560162.1|AV560162 AV560162 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ130c09F 3', mRNA sequence
Length = 484
Score = 54.0 bits (27), Expect = 1e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttg 769
|||||||||| ||||||||||||||||| | ||||||||
Sbjct: 446 catcatcatctgttgcctttgatgtgacggagaagtttg 484
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 1776 tcatattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatac 1835
||||| ||| ||||||||||||| |||| |||||||||| ||||||| ||| ||||
Sbjct: 596147 tcatactaacatcaaagaagacagtgttgtggtttgcataacgatcatttgggtcaatac 596206
Query: 1836 catcaaatctttgtggaaactgaacatagca 1866
| ||||| || || || ||||||||||||||
Sbjct: 596207 cttcaaacctctgagggaactgaacatagca 596237
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1774 cttcatattaatatcaaagaagacaatgttccggtttgcatatcgatcat 1823
||||||| ||| ||||||||||||| |||| |||||||||| |||||||
Sbjct: 47292 cttcatagtaagatcaaagaagacagtgttgtggtttgcataacgatcat 47243
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 838 atgacccaaaactgctcatttctccacca 866
|||||||| |||||||| |||||||||||
Sbjct: 595210 atgacccagaactgctcgtttctccacca 595238
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 2665 ctgatctagaagccaagacaaagcaaaccaaa 2696
|||||| | |||||||||||| ||||||||||
Sbjct: 597300 ctgatccaaaagccaagacaaggcaaaccaaa 597331
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
sequence
Length = 100239
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 1776 tcatattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatac 1835
||||| ||| ||||||||||||| |||| |||||||||| ||||||| ||| ||||
Sbjct: 96389 tcatactaacatcaaagaagacagtgttgtggtttgcataacgatcatttgggtcaatac 96330
Query: 1836 catcaaatctttgtggaaactgaacatagca 1866
| ||||| || || || ||||||||||||||
Sbjct: 96329 cttcaaacctctgagggaactgaacatagca 96299
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 838 atgacccaaaactgctcatttctccacca 866
|||||||| |||||||| |||||||||||
Sbjct: 97326 atgacccagaactgctcgtttctccacca 97298
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 2665 ctgatctagaagccaagacaaagcaaaccaaa 2696
|||||| | |||||||||||| ||||||||||
Sbjct: 95236 ctgatccaaaagccaagacaaggcaaaccaaa 95205
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete
sequence
Length = 121668
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 1776 tcatattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatac 1835
||||| ||| ||||||||||||| |||| |||||||||| ||||||| ||| ||||
Sbjct: 21750 tcatactaacatcaaagaagacagtgttgtggtttgcataacgatcatttgggtcaatac 21691
Query: 1836 catcaaatctttgtggaaactgaacatagca 1866
| ||||| || || || ||||||||||||||
Sbjct: 21690 cttcaaacctctgagggaactgaacatagca 21660
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 838 atgacccaaaactgctcatttctccacca 866
|||||||| |||||||| |||||||||||
Sbjct: 22687 atgacccagaactgctcgtttctccacca 22659
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 2665 ctgatctagaagccaagacaaagcaaaccaaa 2696
|||||| | |||||||||||| ||||||||||
Sbjct: 20597 ctgatccaaaagccaagacaaggcaaaccaaa 20566
>ref|NM_100153.2| Arabidopsis thaliana ATCSLD5; cellulose synthase AT1G02730 (ATCSLD5)
mRNA, complete cds
Length = 3837
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 1776 tcatattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatac 1835
||||| ||| ||||||||||||| |||| |||||||||| ||||||| ||| ||||
Sbjct: 2339 tcatactaacatcaaagaagacagtgttgtggtttgcataacgatcatttgggtcaatac 2280
Query: 1836 catcaaatctttgtggaaactgaacatagca 1866
| ||||| || || || ||||||||||||||
Sbjct: 2279 cttcaaacctctgagggaactgaacatagca 2249
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 838 atgacccaaaactgctcatttctccacca 866
|||||||| |||||||| |||||||||||
Sbjct: 3276 atgacccagaactgctcgtttctccacca 3248
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 2665 ctgatctagaagccaagacaaagcaaaccaaa 2696
|||||| | |||||||||||| ||||||||||
Sbjct: 1279 ctgatccaaaagccaagacaaggcaaaccaaa 1248
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 54.0 bits (27), Expect = 1e-004
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 1776 tcatattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatac 1835
||||| ||| ||||||||||||| |||| |||||||||| ||||||| ||| ||||
Sbjct: 596088 tcatactaacatcaaagaagacagtgttgtggtttgcataacgatcatttgggtcaatac 596147
Query: 1836 catcaaatctttgtggaaactgaacatagca 1866
| ||||| || || || ||||||||||||||
Sbjct: 596148 cttcaaacctctgagggaactgaacatagca 596178
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1774 cttcatattaatatcaaagaagacaatgttccggtttgcatatcgatcat 1823
||||||| ||| ||||||||||||| |||| |||||||||| |||||||
Sbjct: 47292 cttcatagtaagatcaaagaagacagtgttgtggtttgcataacgatcat 47243
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 838 atgacccaaaactgctcatttctccacca 866
|||||||| |||||||| |||||||||||
Sbjct: 595151 atgacccagaactgctcgtttctccacca 595179
Score = 40.1 bits (20), Expect = 2.1
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 2665 ctgatctagaagccaagacaaagcaaaccaaa 2696
|||||| | |||||||||||| ||||||||||
Sbjct: 597241 ctgatccaaaagccaagacaaggcaaaccaaa 597272
>gb|BH902267.1|BH902267 SALK_091568.32.80.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_091568.32.80.x,
DNA sequence
Length = 110
Score = 52.0 bits (26), Expect = 5e-004
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||| ||||||||||| | || || |||| ||| ||||||||||||||
Sbjct: 109 attcatagctccagctttcttgtggtgatcaaatccaggccgcttctcacgagaaacata 50
Query: 2065 aacaagccgtggcaactcattcccatccgt 2094
| || ||||| |||||||| ||||||||
Sbjct: 49 ctctagacgtggtaactcattaccatccgt 20
>gb|CL460544.1|CL460544 SAIL_107_E07.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_107_E07.v1, DNA sequence
Length = 928
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 1774 cttcatattaatatcaaagaagacaatgttccggtttgcatatcgatcat 1823
||||||| ||| ||||||||||||| |||| |||||||||| |||||||
Sbjct: 124 cttcatagtaagatcaaagaagacagtgttgtggtttgcataacgatcat 173
>emb|BX649822.1| Arabidopsis thaliana T-DNA flanking sequence GK-511A03-021258,
genomic survey sequence
Length = 261
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1774 cttcatattaatatcaaagaagacaatgttccggtttgcatatcgatcat 1823
||||||| ||| ||||||||||||| |||| |||||||||| |||||||
Sbjct: 128 cttcatagtaagatcaaagaagacagtgttgtggtttgcataacgatcat 79
>gb|AI999519.1|AI999519 701556274 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701556274, mRNA sequence
Length = 613
Score = 52.0 bits (26), Expect = 5e-004
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 798 accttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatt 857
|||||| |||| |||||| ||||| | |||| || |||||||||||||||||||| |
Sbjct: 456 accttgaaacagagcaaatagatgcgaagagactcctccaatgacccaaaactgctcgnt 515
Query: 858 tctccaccaatc 869
|||||||| |||
Sbjct: 516 tctccaccnatc 527
>gb|AV782896.1|AV782896 AV782896 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-02-P19 3',
mRNA sequence
Length = 593
Score = 52.0 bits (26), Expect = 5e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
||||||| | ||| ||||||||||| |||||||| ||||||| || || || || || |
Sbjct: 493 catcatcagctgcttttgatgtgactgtgaagttagtgtcgacaccagcaagaaccttga 552
Query: 794 agagaccttggaacacagcaaagagatgtgcaga 827
|||||||||||| | |||||| ||||| |||||
Sbjct: 553 ggagaccttggaagagagcaaacagatgcgcaga 586
>gb|AV806463.1|AV806463 AV806463 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-46-L03 3',
mRNA sequence
Length = 465
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 404 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 463
Query: 508 gt 509
||
Sbjct: 464 gt 465
>gb|AV523011.1|AV523011 AV523011 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL12h06F 3', mRNA
sequence
Length = 403
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 339 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 398
Query: 508 gt 509
||
Sbjct: 399 gt 400
>gb|BP614740.1|BP614740 BP614740 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-98-E05 3',
mRNA sequence
Length = 481
Score = 52.0 bits (26), Expect = 5e-004
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||||||||| | ||| | || ||||||| | |||||||| ||| || ||
Sbjct: 333 cccttgaggaaagggtacaagtgaacaattacccagaagggaaagaacaacttaccaaag 392
Query: 592 agtggaccccatgattggtagccactgttgatagcata 629
||||| |||||||||||||| |||||||||| |||||
Sbjct: 393 agtggtccccatgattggtatgcactgttgatcgcata 430
>gb|BP640849.1|BP640849 BP640849 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-53-D05 3',
mRNA sequence
Length = 441
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 378 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggttggt 437
Query: 508 gt 509
||
Sbjct: 438 gt 439
>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I,
complete sequence
Length = 86436
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1774 cttcatattaatatcaaagaagacaatgttccggtttgcatatcgatcat 1823
||||||| ||| ||||||||||||| |||| |||||||||| |||||||
Sbjct: 46994 cttcatagtaagatcaaagaagacagtgttgtggtttgcataacgatcat 46945
>emb|AJ834251.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
015B10
Length = 264
Score = 52.0 bits (26), Expect = 5e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1774 cttcatattaatatcaaagaagacaatgttccggtttgcatatcgatcat 1823
||||||| ||| ||||||||||||| |||| |||||||||| |||||||
Sbjct: 242 cttcatagtaagatcaaagaagacagtgttgtggtttgcataacgatcat 193
>gb|CL468735.1|CL468735 SAIL_1290b_D01.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_1290b_D01.v1, DNA sequence
Length = 926
Score = 50.1 bits (25), Expect = 0.002
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatc 2568
||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 184 ggaggttccttgagcggatccactgtactgacaaacacatc 224
>gb|T45311.1|T45311 8574 Lambda-PRL2 Arabidopsis thaliana cDNA clone 86B7T7, mRNA
sequence
Length = 241
Score = 48.1 bits (24), Expect = 0.009
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 575 agaacagcttcccgaatagtggaccccatgattggtagccactgttgatagcatacgaca 634
|||| |||||||| || || |||||||| || |||||||||||||| | ||||| || |
Sbjct: 162 agaagagcttcccnaaaagcggaccccacgactggtagccactgtttacagcattagana 103
Query: 635 ctccagccac 644
| ||||||||
Sbjct: 102 caccagccac 93
>gb|BP581479.1|BP581479 BP581479 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-32-B22 3',
mRNA sequence
Length = 462
Score = 48.1 bits (24), Expect = 0.009
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggt 503
||||| |||| |||||| ||||| || ||||| || ||||| ||||||||||||||
Sbjct: 403 acccaaagcaacgagaagatggaggcgagaagaacagaccagacaatgacgatggt 458
>gb|BP811914.1|BP811914 BP811914 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-01-K22 5',
mRNA sequence
Length = 386
Score = 48.1 bits (24), Expect = 0.009
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||||||||| ||||| || |||||||| || ||||||| || |||| || |||||
Sbjct: 172 catcctgttcctacatagactggtccttggattccatctaagcctctcatgtttatatcg 113
Query: 1790 aagaagacaatgttccggtttgcatatcgatc 1821
|||||||| ||||| | ||| || ||||||||
Sbjct: 112 aagaagacgatgtttctgttggcgtatcgatc 81
>gb|BP836287.1|BP836287 BP836287 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-15-P11 5',
mRNA sequence
Length = 384
Score = 48.1 bits (24), Expect = 0.009
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||||||||| ||||| || |||||||| || ||||||| || |||| || |||||
Sbjct: 173 catcctgttcctacatagactggtccttggattccatctaagcctctcatgtttatatcg 114
Query: 1790 aagaagacaatgttccggtttgcatatcgatc 1821
|||||||| ||||| | ||| || ||||||||
Sbjct: 113 aagaagacgatgtttctgttggcgtatcgatc 82
>gb|BP837778.1|BP837778 BP837778 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-21-N09 5',
mRNA sequence
Length = 375
Score = 48.1 bits (24), Expect = 0.009
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||||||||| ||||| || |||||||| || ||||||| || |||| || |||||
Sbjct: 176 catcctgttcctacatagactggtccttggattccatctaagcctctcatgtttatatcg 117
Query: 1790 aagaagacaatgttccggtttgcatatcgatc 1821
|||||||| ||||| | ||| || ||||||||
Sbjct: 116 aagaagacgatgtttctgttggcgtatcgatc 85
>gb|CC458575.1|CC458575 SALK_119808.46.70.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_119808.46.70.x,
DNA sequence
Length = 107
Score = 46.1 bits (23), Expect = 0.034
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2660 gggaactgatctagaagccaagacaaagcaaacca 2694
|||| |||||| |||||||||||||| ||||||||
Sbjct: 90 gggagctgatcaagaagccaagacaaggcaaacca 56
>gb|CL469416.1|CL469416 SAIL_1303_D08.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_1303_D08.v1, DNA sequence
Length = 949
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1680 cttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgttc 1739
|||| ||||| ||||||||||| ||||| | ||||||||||| ||||| || || || |
Sbjct: 275 cttccgtcaaaacaggatcatacccatatagagcctgcctattaaaacaacaaccagtac 216
Query: 1740 ccacata 1746
|||||||
Sbjct: 215 ccacata 209
>gb|CW801166.1|CW801166 WiscDsLox293-296invG24 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 755
Score = 46.1 bits (23), Expect = 0.034
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||||||||||||| || | ||||||||||| || || ||||| ||||| |||||||
Sbjct: 413 atgcatcttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatct 471
>gb|AA042439.1|AA042439 24744 CD4-16 Arabidopsis thaliana cDNA clone H10C11T7, mRNA sequence
Length = 476
Score = 46.1 bits (23), Expect = 0.034
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2660 gggaactgatctagaagccaagacaaagcaaacca 2694
|||| |||||| |||||||||||||| ||||||||
Sbjct: 139 gggagctgatcaagaagccaagacaaggcaaacca 105
>gb|AV530048.1|AV530048 AV530048 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL57a09R 5', mRNA
sequence
Length = 358
Score = 46.1 bits (23), Expect = 0.034
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2660 gggaactgatctagaagccaagacaaagcaaacca 2694
|||| |||||| |||||||||||||| ||||||||
Sbjct: 141 gggagctgatcaagaagccaagacaaggcaaacca 107
>gb|BP602343.1|BP602343 BP602343 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-54-G01 3',
mRNA sequence
Length = 418
Score = 46.1 bits (23), Expect = 0.034
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||| |||||| ||||| || ||||| || ||||| | |||||||||||| |||
Sbjct: 336 acccaaagcaacgagaagatggaggcgagaagaacagaccagaaaatgacgatggttggt 395
Query: 508 gtgcggt 514
|| ||||
Sbjct: 396 gttcggt 402
>emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BAC clone F2K13 (ESSA project)
Length = 98101
Score = 46.1 bits (23), Expect = 0.034
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2660 gggaactgatctagaagccaagacaaagcaaacca 2694
|||| |||||| |||||||||||||| ||||||||
Sbjct: 19901 gggagctgatcaagaagccaagacaaggcaaacca 19867
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctc 872
||||||| ||||||||| || ||||||||||| |||||
Sbjct: 21933 ccaatgagccaaaactgttcgtttctccaccattcctc 21896
>ref|NM_121697.3| Arabidopsis thaliana ATCSLD2; cellulose synthase/ transferase,
transferring glycosyl groups AT5G16910 (ATCSLD2) mRNA,
complete cds
Length = 3728
Score = 46.1 bits (23), Expect = 0.034
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 2660 gggaactgatctagaagccaagacaaagcaaacca 2694
|||| |||||| |||||||||||||| ||||||||
Sbjct: 1037 gggagctgatcaagaagccaagacaaggcaaacca 1003
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctc 872
||||||| ||||||||| || ||||||||||| |||||
Sbjct: 2987 ccaatgagccaaaactgttcgtttctccaccattcctc 2950
>emb|CR395103.1| Arabidopsis thaliana T-DNA flanking sequence GK-014H03-025961,
genomic survey sequence
Length = 509
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1778 atattaatatcaaagaagacaatgtt 1803
||||||| ||||||||||||||||||
Sbjct: 34 atattaacatcaaagaagacaatgtt 59
>gb|AI995332.1|AI995332 701673135 A. thaliana, Columbia Col-0, inflorescence-1 Arabidopsis
thaliana cDNA clone 701673135, mRNA sequence
Length = 465
Score = 44.1 bits (22), Expect = 0.13
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 598 ccccatgattggtagccactgttgatagcatacgacactccagccactataccaaccagg 657
||||| ||||||||||||||||| || ||||| || || || ||||| ||||| || |||
Sbjct: 380 ccccacgattggtagccactgtttattgcataggagacaccggccacaataccgacaagg 439
Query: 658 tt 659
||
Sbjct: 440 tt 441
>gb|AV546144.1|AV546144 AV546144 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZL09b12F 3', mRNA sequence
Length = 404
Score = 44.1 bits (22), Expect = 0.13
Identities = 76/94 (80%)
Strand = Plus / Plus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| || |||||||| | |||||||||| ||||| | || | ||||||
Sbjct: 311 tttcttgcaaaatggtacccatttacgagcaaactctgatgtttctgcaagtgattcaaa 370
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataa 2461
| |||||||| | ||| |||||||||||||||
Sbjct: 371 tgataacatagcagcaccatcatcagaaacataa 404
Score = 42.1 bits (21), Expect = 0.53
Identities = 67/83 (80%)
Strand = Plus / Plus
Query: 2096 tcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtta 2155
||||| |||||| | || || ||||| || ||||||||||| ||||| || || | |||
Sbjct: 39 tcaagtccaccattttgccctaagaagacctggatcattcctggatggtcccttgtatta 98
Query: 2156 ttcccaggccanggagtgccatc 2178
|| |||||||| || ||||||||
Sbjct: 99 tttccaggccacggtgtgccatc 121
>dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5
Length = 88356
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1778 atattaatatcaaagaagacaatgtt 1803
||||||| ||||||||||||||||||
Sbjct: 30926 atattaacatcaaagaagacaatgtt 30901
>gb|AQ955592.1|AQ955592 LERAE88TF LERA Arabidopsis thaliana genomic clone LERAE88, DNA
sequence
Length = 694
Score = 42.1 bits (21), Expect = 0.53
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2278 ttctttcacaaaagaaggttg 2298
|||||||||||||||||||||
Sbjct: 208 ttctttcacaaaagaaggttg 188
>gb|AQ955593.1|AQ955593 LERAE88TR LERA Arabidopsis thaliana genomic clone LERAE88, DNA
sequence
Length = 813
Score = 42.1 bits (21), Expect = 0.53
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2278 ttctttcacaaaagaaggttg 2298
|||||||||||||||||||||
Sbjct: 638 ttctttcacaaaagaaggttg 658
>emb|AL951915.1| Arabidopsis thaliana T-DNA flanking sequence GK-339E12-016138,
genomic survey sequence
Length = 366
Score = 42.1 bits (21), Expect = 0.53
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2278 ttctttcacaaaagaaggttg 2298
|||||||||||||||||||||
Sbjct: 228 ttctttcacaaaagaaggttg 248
>emb|BX002729.1| Arabidopsis thaliana T-DNA flanking sequence GK-366F07-017045,
genomic survey sequence
Length = 302
Score = 42.1 bits (21), Expect = 0.53
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| || ||||||||||| || ||| || ||||| ||||||||||| || |||
Sbjct: 68 ccttggaaaacggcaaagagatgagctgagacacctccaataacccaaaactgttcgttt 127
Query: 859 ctcca 863
|||||
Sbjct: 128 ctcca 132
>emb|BX546656.1| Arabidopsis thaliana T-DNA flanking sequence GK-532B11-020373,
genomic survey sequence
Length = 478
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1102 taaccataccagataggacagtgtctgct 1130
||||||||||| |||||||| ||||||||
Sbjct: 78 taaccataccaaataggacaatgtctgct 106
>gb|H36985.1|H36985 15114 Lambda-PRL2 Arabidopsis thaliana cDNA clone 181G15T7, mRNA
sequence
Length = 540
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 168 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 109
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 108 cgaagaacttgatggagacgatccgaaagattgattggagc 68
>gb|AV822205.1|AV822205 AV822205 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-02-P19 5', mRNA
sequence
Length = 675
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 629 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 570
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 569 cgaagaacttgatggagacgatccgaaagattgattggagc 529
>gb|AV527222.1|AV527222 AV527222 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZ31h04R 5', mRNA
sequence
Length = 510
Score = 42.1 bits (21), Expect = 0.53
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| |||||||| || || || | | ||| ||||| || ||||| |||||
Sbjct: 464 taaccataccaaataggacaatgcctactcaagaaaatctcaaccgacccaagcgcccat 405
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagc 1202
|| | ||||| | ||||||||| |||||||| ||||||||
Sbjct: 404 cgaagaacttgatggagacgatccgaaagattgattggagc 364
>gb|CK117572.1|CK117572 215o03.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O03215
5-PRIME, mRNA sequence
Length = 485
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 838 atgacccaaaactgctcatttctccacca 866
|||||||| |||||||| |||||||||||
Sbjct: 160 atgacccagaactgctcgtttctccacca 132
>gb|CK119314.1|CK119314 204i17.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I17204
5-PRIME, mRNA sequence
Length = 800
Score = 42.1 bits (21), Expect = 0.53
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 838 atgacccaaaactgctcatttctccacca 866
|||||||| |||||||| |||||||||||
Sbjct: 784 atgacccagaactgctcgtttctccacca 756
>gb|BP804496.1|BP804496 BP804496 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-02-B22 5',
mRNA sequence
Length = 376
Score = 42.1 bits (21), Expect = 0.53
Identities = 67/83 (80%)
Strand = Plus / Plus
Query: 2096 tcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtta 2155
||||| |||||| | || || ||||| || ||||||||||| ||||| || || | |||
Sbjct: 36 tcaagtccaccattttgccctaagaagacctggatcattcctggatggtcccttgtatta 95
Query: 2156 ttcccaggccanggagtgccatc 2178
|| |||||||| || ||||||||
Sbjct: 96 tttccaggccacggtgtgccatc 118
>emb|BX829237.1|CNS0A4ID Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL83ZF02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 657
Score = 42.1 bits (21), Expect = 0.53
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| || ||||||||||| || ||| || ||||| ||||||||||| || |||
Sbjct: 104 ccttggaaaacggcaaagagatgagctgagacacctccaataacccaaaactgttcgttt 45
Query: 859 ctcca 863
|||||
Sbjct: 44 ctcca 40
>gb|B61152.1|B61152 T20O6TF TAMU Arabidopsis thaliana genomic clone T20O6, DNA sequence
Length = 535
Score = 40.1 bits (20), Expect = 2.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1832 ataccatcaaatctttgtggaaactgaacatagcaa 1867
||||| ||||| | |||||| |||||||||||||||
Sbjct: 70 ataccttcaaaccgttgtgggaactgaacatagcaa 35
>gb|BH902269.1|BH902269 SALK_091570.47.60.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_091570.47.60.x,
DNA sequence
Length = 182
Score = 40.1 bits (20), Expect = 2.1
Identities = 50/60 (83%)
Strand = Plus / Minus
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||| || ||||| ||||||||||| | || || |||| ||| ||||||||||||||
Sbjct: 181 attcatagctccagctttcttgtggtgatcaaatccaggccgcttctcacgagaaacata 122
>gb|CL482395.1|CL482395 SAIL_360_A05.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_360_A05.v1, DNA sequence
Length = 783
Score = 40.1 bits (20), Expect = 2.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2273 cgcctttctttcacaaaaga 2292
||||||||||||||||||||
Sbjct: 637 cgcctttctttcacaaaaga 656
>emb|AL951949.1| Arabidopsis thaliana T-DNA flanking sequence GK-339G12-016138,
genomic survey sequence
Length = 324
Score = 40.1 bits (20), Expect = 2.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2279 tctttcacaaaagaaggttg 2298
||||||||||||||||||||
Sbjct: 200 tctttcacaaaagaaggttg 219
>emb|BX572207.1| Arabidopsis thaliana T-DNA flanking sequence GK-177E03-013519,
genomic survey sequence
Length = 121
Score = 40.1 bits (20), Expect = 2.1
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 839 tgacccaaaactgctcatttctccacca 866
|||||||||||||||| | |||||||||
Sbjct: 54 tgacccaaaactgctcgtgtctccacca 81
>gb|CW844332.1|CW844332 GT10903.Ds5.07.29.2004.jx81.865 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT10903, DNA sequence
Length = 865
Score = 40.1 bits (20), Expect = 2.1
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 760 gtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaa 815
|||||||| |||||||| || ||||| ||||| | ||||||||||| || |||||
Sbjct: 592 gtgaagttggtgtcgataccggctaggactttaagtagaccttggaagactgcaaa 537
>gb|Z30729.1|Z30729 ATTS2475 Versailles-VB Arabidopsis thaliana cDNA clone VBVAA05,
mRNA sequence
Length = 308
Score = 40.1 bits (20), Expect = 2.1
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 842 cccaaaactgctcatttctccaccaatc 869
|||||||||| || ||||||||||||||
Sbjct: 241 cccaaaactgttcgtttctccaccaatc 214
>gb|AF360180.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit
(At3g03050) mRNA, complete cds
Length = 3962
Score = 40.1 bits (20), Expect = 2.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1832 ataccatcaaatctttgtggaaactgaacatagcaa 1867
||||| ||||| | |||||| |||||||||||||||
Sbjct: 2267 ataccttcaaaccgttgtgggaactgaacatagcaa 2232
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 2215 gatccatcatgaaacacat 2197
>gb|AY039996.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit
(At3g03050) mRNA, complete cds
Length = 3438
Score = 40.1 bits (20), Expect = 2.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1832 ataccatcaaatctttgtggaaactgaacatagcaa 1867
||||| ||||| | |||||| |||||||||||||||
Sbjct: 2015 ataccttcaaaccgttgtgggaactgaacatagcaa 1980
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 1963 gatccatcatgaaacacat 1945
>emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene for cellulose synthase-like protein,
exons 1-3
Length = 5385
Score = 40.1 bits (20), Expect = 2.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1832 ataccatcaaatctttgtggaaactgaacatagcaa 1867
||||| ||||| | |||||| |||||||||||||||
Sbjct: 3539 ataccttcaaaccgttgtgggaactgaacatagcaa 3504
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 3487 gatccatcatgaaacacat 3469
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence,
complete sequence
Length = 96540
Score = 40.1 bits (20), Expect = 2.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1832 ataccatcaaatctttgtggaaactgaacatagcaa 1867
||||| ||||| | |||||| |||||||||||||||
Sbjct: 90550 ataccttcaaaccgttgtgggaactgaacatagcaa 90585
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 90602 gatccatcatgaaacacat 90620
>gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC T7M13 genomic sequence,
complete sequence
Length = 80379
Score = 40.1 bits (20), Expect = 2.1
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 760 gtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaa 815
|||||||| |||||||| || ||||| ||||| | ||||||||||| || |||||
Sbjct: 15453 gtgaagttggtgtcgataccggctaggactttaagtagaccttggaagactgcaaa 15398
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
sequence
Length = 93158
Score = 40.1 bits (20), Expect = 2.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 843 ccaaaactgctcatttctccacca 866
||||||||| ||||||||||||||
Sbjct: 63513 ccaaaactgttcatttctccacca 63490
>dbj|AK175868.1| Arabidopsis thaliana mRNA for putative cellulose synthase, partial
cds, clone: RAFL22-49-F01
Length = 2586
Score = 40.1 bits (20), Expect = 2.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 843 ccaaaactgctcatttctccacca 866
||||||||| ||||||||||||||
Sbjct: 2014 ccaaaactgttcatttctccacca 1991
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 40.1 bits (20), Expect = 2.1
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 760 gtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaa 815
|||||||| |||||||| || ||||| ||||| | ||||||||||| || |||||
Sbjct: 3347460 gtgaagttggtgtcgataccggctaggactttaagtagaccttggaagactgcaaa 3347405
Score = 40.1 bits (20), Expect = 2.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1832 ataccatcaaatctttgtggaaactgaacatagcaa 1867
||||| ||||| | |||||| |||||||||||||||
Sbjct: 774775 ataccttcaaaccgttgtgggaactgaacatagcaa 774810
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 774827 gatccatcatgaaacacat 774845
>ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNTHASE-LIKE 3); cellulose
synthase/ transferase, transferring glycosyl groups
AT3G03050 (CSLD3) mRNA, complete cds
Length = 4206
Score = 40.1 bits (20), Expect = 2.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1832 ataccatcaaatctttgtggaaactgaacatagcaa 1867
||||| ||||| | |||||| |||||||||||||||
Sbjct: 2514 ataccttcaaaccgttgtgggaactgaacatagcaa 2479
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 2462 gatccatcatgaaacacat 2444
>ref|NM_128870.3| Arabidopsis thaliana ATCSLD1; cellulose synthase/ transferase,
transferring glycosyl groups AT2G33100 (ATCSLD1) mRNA,
complete cds
Length = 3286
Score = 40.1 bits (20), Expect = 2.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 843 ccaaaactgctcatttctccacca 866
||||||||| ||||||||||||||
Sbjct: 2658 ccaaaactgttcatttctccacca 2635
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 40.1 bits (20), Expect = 2.1
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 760 gtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaa 815
|||||||| |||||||| || ||||| ||||| | ||||||||||| || |||||
Sbjct: 3400960 gtgaagttggtgtcgataccggctaggactttaagtagaccttggaagactgcaaa 3401015
Score = 40.1 bits (20), Expect = 2.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1832 ataccatcaaatctttgtggaaactgaacatagcaa 1867
||||| ||||| | |||||| |||||||||||||||
Sbjct: 690213 ataccttcaaaccgttgtgggaactgaacatagcaa 690178
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 690161 gatccatcatgaaacacat 690143
>emb|AL093113.1|CNS00W4B Arabidopsis thaliana genome survey sequence SP6 end of BAC T11A15 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 526
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 2303 ttgtcctttaggtaatctatctt 2325
|||||||||| ||||||||||||
Sbjct: 469 ttgtcctttaagtaatctatctt 447
>gb|BH865757.1|BH865757 SALK_099805 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_099805, DNA sequence
Length = 236
Score = 38.2 bits (19), Expect = 8.2
Identities = 49/59 (83%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||||||| || | ||||||||||| || || ||||| ||||| |||||||
Sbjct: 223 atgcaccttgaaacccgtcaggatatcttcagtcaccgatccataaatccacccgatct 165
>emb|AL765187.1| Arabidopsis thaliana T-DNA flanking sequence GK-136B01-012754,
genomic survey sequence
Length = 367
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 2303 ttgtcctttaggtaatctatctt 2325
|||||||||| ||||||||||||
Sbjct: 39 ttgtcctttaagtaatctatctt 17
>gb|N96510.1|N96510 21201 CD4-14 Arabidopsis thaliana cDNA clone F4E7T7, mRNA sequence
Length = 543
Score = 38.2 bits (19), Expect = 8.2
Identities = 73/90 (81%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 1258 gcatgcatcttgaaaccagttaaaatatc-ttcagtaacagagccatatatccatccgat 1316
|||||||| ||||| ||||| | |||| | ||| || ||||| ||||| |||||||| ||
Sbjct: 387 gcatgcattttgaacccagtcagaatanccttctgtcacagaaccatagatccatccaat 328
Query: 1317 ctctttcccccattctgttttatcctcata 1346
||| | ||||| |||| |||||||||||
Sbjct: 327 ctccattccccaatctgacttatcctcata 298
>gb|AI992761.1|AI992761 701493456 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA
clone 701493456, mRNA sequence
Length = 511
Score = 38.2 bits (19), Expect = 8.2
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||||||||| || || |||||||| || || | ||||||||| |||||
Sbjct: 249 atgcatcttgaatcccgtcaaaatatcctctgtgatagagccatagatcca 199
>gb|AI993628.1|AI993628 701496831 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701496831, mRNA sequence
Length = 457
Score = 38.2 bits (19), Expect = 8.2
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 599 cccatgattggtagccactgttgatagcata 629
|||||| |||||| || ||||||||||||||
Sbjct: 405 cccatggttggtatcccctgttgatagcata 435
>gb|AV807703.1|AV807703 AV807703 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-51-J19 3',
mRNA sequence
Length = 494
Score = 38.2 bits (19), Expect = 8.2
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgt 509
||||| || ||||| |||||||||||||| |||||
Sbjct: 435 agaagaacagaccagacaatgacgatggtgggtgt 469
>gb|AU237456.1|AU237456 AU237456 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-26-P17 5',
mRNA sequence
Length = 668
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1165 aacacttggttgagacgatcaga 1187
||||||| |||||||||||||||
Sbjct: 559 aacactttgttgagacgatcaga 537
>gb|CB260305.1|CB260305 81-E9600-013-003-A21-t7r MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770A213Q 5-PRIME, mRNA sequence
Length = 82
Score = 38.2 bits (19), Expect = 8.2
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgat 1064
||||| |||||||| ||||| || |||||||||||
Sbjct: 82 gggatggatgtaataggatagacgatggtgttgat 48
>gb|AV553463.1|AV553463 AV553463 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ63c06R 5', mRNA sequence
Length = 549
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1045 ggataaacaatggtgttgatgta 1067
||||||||||| |||||||||||
Sbjct: 313 ggataaacaattgtgttgatgta 291
>gb|BP570054.1|BP570054 BP570054 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-71-E01 3',
mRNA sequence
Length = 469
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1098 attgtaaccataccagata 1116
|||||||||||||||||||
Sbjct: 30 attgtaaccataccagata 48
>gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synthase-like CSLD3 (CslD3) mRNA,
complete cds
Length = 3827
Score = 38.2 bits (19), Expect = 8.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 2211 gatccatcatgaaacacat 2193
>emb|AJ520593.1|ATH520593 Arabidopsis thaliana T-DNA flanking sequence, left border, clone
038C12
Length = 114
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1781 ttaatatcaaagaagacaatgtt 1803
|||| ||||||||||||||||||
Sbjct: 3 ttaacatcaaagaagacaatgtt 25
>gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K3 map mi320, complete
sequence
Length = 73009
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1165 aacacttggttgagacgatcaga 1187
||||||| |||||||||||||||
Sbjct: 64466 aacactttgttgagacgatcaga 64444
>dbj|AB006698.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCL19
Length = 84510
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2303 ttgtcctttaggtaatctatctt 2325
|||||||||| ||||||||||||
Sbjct: 4011 ttgtcctttaagtaatctatctt 4033
>ref|NM_001035868.1| Arabidopsis thaliana unknown protein AT2G01910 transcript variant
AT2G01910.2 mRNA, complete cds
Length = 2100
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1165 aacacttggttgagacgatcaga 1187
||||||| |||||||||||||||
Sbjct: 545 aacactttgttgagacgatcaga 523
>ref|NM_126252.3| Arabidopsis thaliana unknown protein AT2G01910 transcript variant
AT2G01910.1 mRNA, complete cds
Length = 2410
Score = 38.2 bits (19), Expect = 8.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1165 aacacttggttgagacgatcaga 1187
||||||| |||||||||||||||
Sbjct: 855 aacactttgttgagacgatcaga 833
Database: At_nucl_with_EST.fasta
Posted date: May 2, 2006 2:53 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,462,811
Number of Sequences: 1013581
Number of extensions: 1462811
Number of successful extensions: 106217
Number of sequences better than 10.0: 249
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 93540
Number of HSP's gapped (non-prelim): 12489
length of query: 2856
length of database: 908,940,872
effective HSP length: 21
effective length of query: 2835
effective length of database: 887,655,671
effective search space: 2516503827285
effective search space used: 2516503827285
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)