BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.3
(801 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA... 103 5e-020
gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana ... 103 5e-020
gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana ... 103 5e-020
gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS... 103 5e-020
gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-AD... 103 5e-020
gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana ... 103 5e-020
gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana ... 103 5e-020
gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A1... 103 5e-020
gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRN... 103 5e-020
ref|NM_118843.2| Arabidopsis thaliana structural constituen... 103 5e-020
gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana ... 98 3e-018
gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower... 98 3e-018
gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana ... 98 3e-018
gb|AV785880.1|AV785880 AV785880 RAFL6 Arabidopsis thaliana ... 96 1e-017
gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana... 96 1e-017
gb|BP585750.1|BP585750 BP585750 RAFL15 Arabidopsis thaliana... 96 1e-017
gb|BP627452.1|BP627452 BP627452 RAFL17 Arabidopsis thaliana... 96 1e-017
gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal ... 96 1e-017
gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal ... 96 1e-017
emb|AX506868.1| Sequence 1563 from Patent WO0216655 96 1e-017
gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, compl... 96 1e-017
emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cD... 96 1e-017
ref|NM_127604.2| Arabidopsis thaliana structural constituen... 96 1e-017
gb|BP594946.1|BP594946 BP594946 RAFL15 Arabidopsis thaliana... 94 4e-017
gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana ... 90 7e-016
gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana ... 90 7e-016
gb|BP587944.1|BP587944 BP587944 RAFL15 Arabidopsis thaliana... 90 7e-016
gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADI... 88 3e-015
gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana... 88 3e-015
gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS... 88 3e-015
gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana... 88 3e-015
gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana... 88 3e-015
gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana... 88 3e-015
gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana... 88 3e-015
gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana... 88 3e-015
gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower... 82 2e-013
gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana... 82 2e-013
gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana... 82 2e-013
gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana... 82 2e-013
gb|BP635805.1|BP635805 BP635805 RAFL18 Arabidopsis thaliana... 80 7e-013
gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana... 80 7e-013
gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C... 80 7e-013
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 80 7e-013
gb|BE523677.1|BE523677 M40D11STM Arabidopsis developing see... 78 3e-012
gb|AA585838.1|AA585838 28487 Lambda-PRL2 Arabidopsis thalia... 76 1e-011
gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana... 76 1e-011
gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana... 76 1e-011
gb|AV789152.1|AV789152 AV789152 RAFL6 Arabidopsis thaliana ... 74 4e-011
gb|AV789575.1|AV789575 AV789575 RAFL6 Arabidopsis thaliana ... 74 4e-011
gb|AV790235.1|AV790235 AV790235 RAFL6 Arabidopsis thaliana ... 74 4e-011
gb|AV820668.1|AV820668 AV820668 RAFL11 Arabidopsis thaliana... 74 4e-011
gb|BP577085.1|BP577085 BP577085 RAFL14 Arabidopsis thaliana... 74 4e-011
gb|BP597426.1|BP597426 BP597426 RAFL15 Arabidopsis thaliana... 74 4e-011
gb|BP626679.1|BP626679 BP626679 RAFL17 Arabidopsis thaliana... 74 4e-011
gb|BP784666.1|BP784666 BP784666 RAFL7 Arabidopsis thaliana ... 74 4e-011
gb|BP799467.1|BP799467 BP799467 RAFL14 Arabidopsis thaliana... 74 4e-011
gb|T22860.1|T22860 4868 Lambda-PRL2 Arabidopsis thaliana cD... 72 2e-010
gb|BP625359.1|BP625359 BP625359 RAFL17 Arabidopsis thaliana... 72 2e-010
gb|BP628325.1|BP628325 BP628325 RAFL17 Arabidopsis thaliana... 72 2e-010
gb|BP800136.1|BP800136 BP800136 RAFL14 Arabidopsis thaliana... 72 2e-010
gb|BP845987.1|BP845987 BP845987 RAFL21 Arabidopsis thaliana... 72 2e-010
gb|BP641343.1|BP641343 BP641343 RAFL19 Arabidopsis thaliana... 70 6e-010
gb|BP634478.1|BP634478 BP634478 RAFL17 Arabidopsis thaliana... 68 3e-009
gb|AV785709.1|AV785709 AV785709 RAFL6 Arabidopsis thaliana ... 66 1e-008
gb|BP567540.1|BP567540 BP567540 RAFL14 Arabidopsis thaliana... 66 1e-008
gb|BP575262.1|BP575262 BP575262 RAFL14 Arabidopsis thaliana... 66 1e-008
gb|BP575360.1|BP575360 BP575360 RAFL14 Arabidopsis thaliana... 66 1e-008
gb|BP580988.1|BP580988 BP580988 RAFL14 Arabidopsis thaliana... 66 1e-008
gb|BP643814.1|BP643814 BP643814 RAFL19 Arabidopsis thaliana... 66 1e-008
gb|BP845942.1|BP845942 BP845942 RAFL21 Arabidopsis thaliana... 66 1e-008
gb|BP627571.1|BP627571 BP627571 RAFL17 Arabidopsis thaliana... 64 4e-008
gb|BP629494.1|BP629494 BP629494 RAFL17 Arabidopsis thaliana... 64 4e-008
gb|BP857725.1|BP857725 BP857725 RAFL21 Arabidopsis thaliana... 64 4e-008
gb|BP864372.1|BP864372 BP864372 RAFL21 Arabidopsis thaliana... 64 4e-008
gb|BP868284.1|BP868284 BP868284 RAFL21 Arabidopsis thaliana... 64 4e-008
emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cD... 64 4e-008
gb|BP593704.1|BP593704 BP593704 RAFL15 Arabidopsis thaliana... 62 2e-007
gb|BP594218.1|BP594218 BP594218 RAFL15 Arabidopsis thaliana... 62 2e-007
gb|BP616173.1|BP616173 BP616173 RAFL16 Arabidopsis thaliana... 62 2e-007
gb|BP664961.1|BP664961 BP664961 RAFL21 Arabidopsis thaliana... 62 2e-007
gb|AV808368.1|AV808368 AV808368 RAFL9 Arabidopsis thaliana ... 60 6e-007
gb|BP861626.1|BP861626 BP861626 RAFL21 Arabidopsis thaliana... 60 6e-007
gb|BP863509.1|BP863509 BP863509 RAFL21 Arabidopsis thaliana... 60 6e-007
gb|AI997481.1|AI997481 701554127 A. thaliana, Columbia Col-... 58 2e-006
gb|BP596545.1|BP596545 BP596545 RAFL15 Arabidopsis thaliana... 58 2e-006
gb|BP664156.1|BP664156 BP664156 RAFL21 Arabidopsis thaliana... 58 2e-006
gb|BP843110.1|BP843110 BP843110 RAFL21 Arabidopsis thaliana... 58 2e-006
gb|BP856130.1|BP856130 BP856130 RAFL21 Arabidopsis thaliana... 58 2e-006
emb|BX826370.1|CNS0A41L Arabidopsis thaliana Full-length cD... 58 2e-006
gb|Z25616.1|Z25616 ATTS1079 AC16H Arabidopsis thaliana cDNA... 56 1e-005
gb|AV555106.1|AV555106 AV555106 Arabidopsis thaliana green ... 56 1e-005
gb|BP659935.1|BP659935 BP659935 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BP665509.1|BP665509 BP665509 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP860765.1|BP860765 BP860765 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP867797.1|BP867797 BP867797 RAFL21 Arabidopsis thaliana... 56 1e-005
gb|BP640700.1|BP640700 BP640700 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP660581.1|BP660581 BP660581 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|CB254828.1|CB254828 58-E018361-019-007-C16-T7R MPIZ-ADIS... 54 4e-005
gb|BP862318.1|BP862318 BP862318 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|BP578758.1|BP578758 BP578758 RAFL14 Arabidopsis thaliana... 52 2e-004
gb|BP662569.1|BP662569 BP662569 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BP849718.1|BP849718 BP849718 RAFL21 Arabidopsis thaliana... 52 2e-004
gb|BP860007.1|BP860007 BP860007 RAFL21 Arabidopsis thaliana... 52 2e-004
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 52 2e-004
emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome... 52 2e-004
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 52 2e-004
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 52 2e-004
gb|Z26097.1|Z26097 ATTS1369 Grenoble-B Arabidopsis thaliana... 50 6e-004
gb|R64748.1|R64748 13252 Lambda-PRL2 Arabidopsis thaliana c... 50 6e-004
gb|AV564782.1|AV564782 AV564782 Arabidopsis thaliana green ... 50 6e-004
gb|BP610096.1|BP610096 BP610096 RAFL16 Arabidopsis thaliana... 50 6e-004
gb|BP668776.1|BP668776 BP668776 RAFL21 Arabidopsis thaliana... 50 6e-004
gb|BP854616.1|BP854616 BP854616 RAFL21 Arabidopsis thaliana... 50 6e-004
gb|BP591947.1|BP591947 BP591947 RAFL15 Arabidopsis thaliana... 48 0.002
gb|BP648411.1|BP648411 BP648411 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP826835.1|BP826835 BP826835 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP856452.1|BP856452 BP856452 RAFL21 Arabidopsis thaliana... 48 0.002
gb|BP799123.1|BP799123 BP799123 RAFL14 Arabidopsis thaliana... 46 0.009
gb|BP806298.1|BP806298 BP806298 RAFL16 Arabidopsis thaliana... 46 0.009
gb|BP844124.1|BP844124 BP844124 RAFL21 Arabidopsis thaliana... 46 0.009
gb|BP859248.1|BP859248 BP859248 RAFL21 Arabidopsis thaliana... 46 0.009
gb|BP589850.1|BP589850 BP589850 RAFL15 Arabidopsis thaliana... 44 0.037
gb|BP630153.1|BP630153 BP630153 RAFL17 Arabidopsis thaliana... 44 0.037
gb|BP578366.1|BP578366 BP578366 RAFL14 Arabidopsis thaliana... 42 0.14
gb|BP582688.1|BP582688 BP582688 RAFL14 Arabidopsis thaliana... 42 0.14
gb|BP821710.1|BP821710 BP821710 RAFL19 Arabidopsis thaliana... 42 0.14
>gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l14, mRNA sequence
Length = 647
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Minus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 608 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 549
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 548 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 489
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 488 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 429
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 428 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 369
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 368 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 309
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 308 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 249
Query: 461 caagagct 468
||||||||
Sbjct: 248 caagagct 241
>gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 3',
mRNA sequence
Length = 640
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Minus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 550 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 491
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 490 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 431
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 430 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 371
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 370 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 311
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 310 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 251
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 250 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 191
Query: 461 caagagct 468
||||||||
Sbjct: 190 caagagct 183
>gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 3',
mRNA sequence
Length = 599
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Minus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 528 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 469
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 468 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 409
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 408 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 349
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 348 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 289
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 288 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 229
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 228 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 169
Query: 461 caagagct 468
||||||||
Sbjct: 168 caagagct 161
>gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000B144Q 5-PRIME, mRNA sequence
Length = 596
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 51 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 110
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 111 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 170
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 171 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 230
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 231 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 290
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 291 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 350
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 351 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 410
Query: 461 caagagct 468
||||||||
Sbjct: 411 caagagct 418
>gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 705
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 58 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 117
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 118 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 177
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 178 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 237
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 238 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 297
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 298 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 357
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 358 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 417
Query: 461 caagagct 468
||||||||
Sbjct: 418 caagagct 425
>gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A16218
5-PRIME, mRNA sequence
Length = 630
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 74 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 133
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 134 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 193
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 194 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 253
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 254 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 313
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 314 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 373
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 374 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 433
Query: 461 caagagct 468
||||||||
Sbjct: 434 caagagct 441
>gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L04214
5-PRIME, mRNA sequence
Length = 604
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 62 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 121
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 122 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 181
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 182 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 241
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 242 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 301
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 302 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 361
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 362 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 421
Query: 461 caagagct 468
||||||||
Sbjct: 422 caagagct 429
>gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 619
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 70 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 129
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 130 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 189
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 190 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 249
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 250 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 309
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 310 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 369
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 370 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 429
Query: 461 caagagct 468
||||||||
Sbjct: 430 caagagct 437
>gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 405
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 7 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 66
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 67 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 126
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 127 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 186
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 187 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 246
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 247 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 306
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 307 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 366
Query: 461 caagagct 468
||||||||
Sbjct: 367 caagagct 374
>ref|NM_118843.2| Arabidopsis thaliana structural constituent of ribosome AT4G27090
mRNA, complete cds
Length = 668
Score = 103 bits (52), Expect = 5e-020
Identities = 289/368 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 71 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 130
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 131 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 190
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 191 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 250
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 251 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 310
Query: 341 aagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactc 400
||||||||||| ||||||||||| | |||||| || || ||||| | |||||| ||
Sbjct: 311 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 370
Query: 401 agtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcagg 460
| |||||||| ||||||||| ||||| |||| | |||||||| | ||||| | |||||
Sbjct: 371 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 430
Query: 461 caagagct 468
||||||||
Sbjct: 431 caagagct 438
>gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 5',
mRNA sequence
Length = 677
Score = 97.6 bits (49), Expect = 3e-018
Identities = 241/305 (79%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
|||||||| |||||||| || || ||||||||||| || | ||||| ||||||||||||
Sbjct: 136 ctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgatatg 195
Query: 224 gtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatcaaa 283
| ||| |||||| |||||||| || | || |||||||| || |||||||||||
Sbjct: 196 gagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatcaac 255
Query: 284 cgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagactaag 343
||||| || |||||| | |||||| |||| ||||| | ||||||||||||| |||
Sbjct: 256 cgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaacaag 315
Query: 344 tgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactcagt 403
|||||||| ||||||||||| | |||||| || || ||||| | |||||| || |
Sbjct: 316 tgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaaccttaac 375
Query: 404 gactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcaggcaa 463
|||||||| ||||||||| ||||| |||| | |||||||| | ||||| | ||||||||
Sbjct: 376 gactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcaggcaa 435
Query: 464 gagct 468
|||||
Sbjct: 436 gagct 440
>gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB086g02F 3', mRNA sequence
Length = 512
Score = 97.6 bits (49), Expect = 3e-018
Identities = 241/305 (79%)
Strand = Plus / Minus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
|||||||| |||||||| || || ||||||||||| || | ||||| ||||||||||||
Sbjct: 466 ctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgatatg 407
Query: 224 gtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatcaaa 283
| ||| |||||| |||||||| || | || |||||||| || |||||||||||
Sbjct: 406 gagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatcaac 347
Query: 284 cgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagactaag 343
||||| || |||||| | |||||| |||| ||||| | ||||||||||||| |||
Sbjct: 346 cgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaacaag 287
Query: 344 tgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactcagt 403
|||||||| ||||||||||| | |||||| || || ||||| | |||||| || |
Sbjct: 286 tgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaaccttaac 227
Query: 404 gactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcaggcaa 463
|||||||| ||||||||| ||||| |||| | |||||||| | ||||| | ||||||||
Sbjct: 226 gactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcaggcaa 167
Query: 464 gagct 468
|||||
Sbjct: 166 gagct 162
>gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 5',
mRNA sequence
Length = 617
Score = 97.6 bits (49), Expect = 3e-018
Identities = 241/305 (79%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
|||||||| |||||||| || || ||||||||||| || | ||||| ||||||||||||
Sbjct: 132 ctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgatatg 191
Query: 224 gtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatcaaa 283
| ||| |||||| |||||||| || | || |||||||| || |||||||||||
Sbjct: 192 gagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatcaac 251
Query: 284 cgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagactaag 343
||||| || |||||| | |||||| |||| ||||| | ||||||||||||| |||
Sbjct: 252 cgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaacaag 311
Query: 344 tgggagaacagctcatggggcaagaagctgattgtccagaagaggagggctgcactcagt 403
|||||||| ||||||||||| | |||||| || || ||||| | |||||| || |
Sbjct: 312 tgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaaccttaac 371
Query: 404 gactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgctatcaggcaa 463
|||||||| ||||||||| ||||| |||| | |||||||| | ||||| | ||||||||
Sbjct: 372 gactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcaggcaa 431
Query: 464 gagct 468
|||||
Sbjct: 432 gagct 436
>gb|AV785880.1|AV785880 AV785880 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-M06 3',
mRNA sequence
Length = 394
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 367 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 308
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 307 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 248
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 247 ccaaaatcaagagggctggt 228
>gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-12-J16 3',
mRNA sequence
Length = 431
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 298 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 239
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 238 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 179
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 178 ccaaaatcaagagggctggt 159
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 184 ggtcgaccagaacagggcacttgtggacgcccctgatatgg 224
||||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 426 ggtcgaccaaaacagggcacttgtggatgcccctgacatgg 386
>gb|BP585750.1|BP585750 BP585750 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-03-L15 3',
mRNA sequence
Length = 445
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 332 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtatgaaac 273
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 272 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 213
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 212 ccaaaatcaagagggctggt 193
>gb|BP627452.1|BP627452 BP627452 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-08-J11 3',
mRNA sequence
Length = 364
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 331 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 272
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 271 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 212
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 211 ccaaaatcaagagggctggt 192
>gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 672
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 275 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 334
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 335 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 394
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 395 ccaaaatcaagagggctggt 414
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 127 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 186
Query: 224 g 224
|
Sbjct: 187 g 187
>gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 436
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 218 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 277
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 278 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 337
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 338 ccaaaatcaagagggctggt 357
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 70 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 129
Query: 224 g 224
|
Sbjct: 130 g 130
>emb|AX506868.1| Sequence 1563 from Patent WO0216655
Length = 405
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 218 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 277
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 278 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 337
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 338 ccaaaatcaagagggctggt 357
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 70 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 129
Query: 224 g 224
|
Sbjct: 130 g 130
>gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, complete sequence
Length = 628
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 275 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 334
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 335 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 394
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 395 ccaaaatcaagagggctggt 414
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 127 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 186
Query: 224 g 224
|
Sbjct: 187 g 187
>emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH2ZA05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 580
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 249 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 308
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 309 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 368
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 369 ccaaaatcaagagggctggt 388
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 101 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 160
Query: 224 g 224
|
Sbjct: 161 g 161
>ref|NM_127604.2| Arabidopsis thaliana structural constituent of ribosome AT2G20450
mRNA, complete cds
Length = 642
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 275 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 334
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 335 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 394
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 395 ccaaaatcaagagggctggt 414
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 127 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 186
Query: 224 g 224
|
Sbjct: 187 g 187
>gb|BP594946.1|BP594946 BP594946 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-27-M14 3',
mRNA sequence
Length = 466
Score = 93.7 bits (47), Expect = 4e-017
Identities = 113/135 (83%)
Strand = Plus / Minus
Query: 317 atggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagctgatt 376
|||||| | ||||||||||||| ||||||||||| || |||||||| | ||| || |||
Sbjct: 362 atggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaacttatt 303
Query: 377 gtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctggcaagg 436
|| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||| |
Sbjct: 302 gtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttggccaaa 243
Query: 437 atcaagaggggtggt 451
|||||||||| ||||
Sbjct: 242 atcaagagggctggt 228
>gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-M06 5',
mRNA sequence
Length = 648
Score = 89.7 bits (45), Expect = 7e-016
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 276 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 335
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 336 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 395
Query: 432 caaggatcaagaggggtggt 451
| |||||||||| ||||
Sbjct: 396 ncaaaatcaagagggctggt 415
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 128 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 187
Query: 224 g 224
|
Sbjct: 188 g 188
>gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I19217
5-PRIME, mRNA sequence
Length = 441
Score = 89.7 bits (45), Expect = 7e-016
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 205 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 264
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| | ||||||||||||| ||||| |||
Sbjct: 265 ttattgtgcagaagagaagagctgccctcaatgattntgacaggttcaagatcatgttgg 324
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 325 ccaaaatcaagagggctggt 344
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 57 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 116
Query: 224 g 224
|
Sbjct: 117 g 117
>gb|BP587944.1|BP587944 BP587944 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-44-H22 3',
mRNA sequence
Length = 406
Score = 89.7 bits (45), Expect = 7e-016
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 367 aggccatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 308
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 307 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 248
Query: 432 c 432
|
Sbjct: 247 c 247
>gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 397
Score = 87.7 bits (44), Expect = 3e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 58 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 117
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 118 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 177
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 178 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 237
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 238 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 297
Query: 341 aagtgggagaacagctcatggggcaagaagct 372
||||||||||| ||||||||||| | ||||||
Sbjct: 298 aagtgggagaaaagctcatggggtaggaagct 329
>gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-05-H08 3',
mRNA sequence
Length = 465
Score = 87.7 bits (44), Expect = 3e-015
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | |||||| |||||| ||||||||||| || |||||||| | ||| |
Sbjct: 332 aggcaatggagaaggctgatttgaagaacaagtgggagaagagttcatggggtaggaaac 273
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 272 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 213
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 212 ccaaaatcaagagggctggt 193
Score = 58.0 bits (29), Expect = 2e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 180 atgtggtcgaccagaacagggcacttgtggacgcccctgatatgg 224
|||| |||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 464 atgtagtcgaccaaaacagggcacttgtggatgcccctgacatgg 420
>gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768M238Q 5-PRIME, mRNA sequence
Length = 611
Score = 87.7 bits (44), Expect = 3e-015
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 224 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 283
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| || ||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 284 ttattgtgcaaaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 343
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 344 ccaaaatcaagagggctggt 363
Score = 65.9 bits (33), Expect = 1e-008
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || |||||| |||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 76 ctcgtggttatcgtcaatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 135
Query: 224 g 224
|
Sbjct: 136 g 136
>gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-42-L13 5',
mRNA sequence
Length = 407
Score = 87.7 bits (44), Expect = 3e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 68 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 127
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 128 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 187
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 188 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 247
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 248 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 307
Query: 341 aagtgggagaacagctcatggggcaagaagct 372
||||||||||| ||||||||||| | ||||||
Sbjct: 308 aagtgggagaaaagctcatggggtaggaagct 339
>gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-87-E19 5',
mRNA sequence
Length = 385
Score = 87.7 bits (44), Expect = 3e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 66 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 125
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 126 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 185
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 186 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 245
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 246 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 305
Query: 341 aagtgggagaacagctcatggggcaagaagct 372
||||||||||| ||||||||||| | ||||||
Sbjct: 306 aagtgggagaaaagctcatggggtaggaagct 337
>gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-A08 5',
mRNA sequence
Length = 397
Score = 87.7 bits (44), Expect = 3e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 66 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 125
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 126 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 185
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 186 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 245
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 246 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 305
Query: 341 aagtgggagaacagctcatggggcaagaagct 372
||||||||||| ||||||||||| | ||||||
Sbjct: 306 aagtgggagaaaagctcatggggtaggaagct 337
>gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-G16 5',
mRNA sequence
Length = 384
Score = 87.7 bits (44), Expect = 3e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||||||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 67 ttcaagaggtacgtggagatcgggagagtagcacttgtgaactacggagaagatcatgga 126
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || ||||| |||||||||
Sbjct: 127 aagctcgtcgttatcgtcgacgttgttgaccagaacagagcttgggtggatgcccctgat 186
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 187 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 246
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 247 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 306
Query: 341 aagtgggagaacagctcatggggcaagaagct 372
||||||||||| ||||||||||| | ||||||
Sbjct: 307 aagtgggagaaaagctcatggggtaggaagct 338
>gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-76-N21 5',
mRNA sequence
Length = 386
Score = 87.7 bits (44), Expect = 3e-015
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | |||
Sbjct: 238 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaat 297
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgctgg 431
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||| ||||| |||
Sbjct: 298 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 357
Query: 432 caaggatcaagaggggtggt 451
| | |||||||||| ||||
Sbjct: 358 ccaaaatcaagagggctggt 377
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 89 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 148
Query: 224 g 224
|
Sbjct: 149 g 149
>gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB033c09F 3', mRNA sequence
Length = 476
Score = 81.8 bits (41), Expect = 2e-013
Identities = 221/281 (78%)
Strand = Plus / Minus
Query: 188 gaccagaacagggcacttgtggacgcccctgatatggtcaggtgccagattaacttcaaa 247
||||||||||| || | ||||| ||||||||||||| ||| |||||| ||||||||
Sbjct: 472 gaccagaacagagctttggtggatgcccctgatatggagaggatccagatgaacttcaag 413
Query: 248 cggctctcacttaccgacatcaagattgacatcaaacgtgtccccaagaagtcaaccttg 307
|| | || |||||||| || ||||||||||| ||||| || |||||| | |||
Sbjct: 412 aggttgtctcttaccgatattgtcattgacatcaaccgtgtgccaaagaagaaggctttg 353
Query: 308 atcaaggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaag 367
||| |||| ||||| | ||||||||||||| ||||||||||| ||||||||||| | |
Sbjct: 352 atcgaggcaatggaaaaggctgatgtgaagaacaagtgggagaaaagctcatggggtagg 293
Query: 368 aagctgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatg 427
||||| || || ||||| | |||||| || | |||||||| ||||||||| |||||
Sbjct: 292 aagcttatcgtgcagaaacgtagggctaaccttaacgactttgataggttcaagatcatg 233
Query: 428 ctggcaaggatcaagaggggtggtgctatcaggcaagagct 468
|||| | |||||||| | ||||| | |||||||||||||
Sbjct: 232 ttggccaagatcaagaaagctggtgttgtcaggcaagagct 192
>gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-06-J22 3',
mRNA sequence
Length = 445
Score = 81.8 bits (41), Expect = 2e-013
Identities = 221/281 (78%)
Strand = Plus / Minus
Query: 188 gaccagaacagggcacttgtggacgcccctgatatggtcaggtgccagattaacttcaaa 247
||||||||||| || | ||||| ||||||||||||| ||| |||||| ||||||||
Sbjct: 441 gaccagaacagagctttggtggatgcccctgatatggagaggatccagatgaacttcaag 382
Query: 248 cggctctcacttaccgacatcaagattgacatcaaacgtgtccccaagaagtcaaccttg 307
|| | || |||||||| || ||||||||||| ||||| || |||||| | |||
Sbjct: 381 aggttgtctcttaccgatattgtcattgacatcaaccgtgtgccaaagaagaaggctttg 322
Query: 308 atcaaggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaag 367
||| |||| ||||| | ||||||||||||| ||||||||||| ||||||||||| | |
Sbjct: 321 atcgaggcaatggaaaaggctgatgtgaagaacaagtgggagaaaagctcatggggtagg 262
Query: 368 aagctgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatg 427
||||| || || ||||| | |||||| || | |||||||| ||||||||| |||||
Sbjct: 261 aagcttatcgtgcagaaacgtagggctaaccttaacgactttgataggttcaagatcatg 202
Query: 428 ctggcaaggatcaagaggggtggtgctatcaggcaagagct 468
|||| | |||||||| | ||||| | |||||||||||||
Sbjct: 201 ttggccaagatcaagaaagctggtgttgtcaggcaagagct 161
>gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-74-O20 5',
mRNA sequence
Length = 381
Score = 81.8 bits (41), Expect = 2e-013
Identities = 167/209 (79%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
|||||||| |||||||| ||||| ||||||||||| || | ||||| ||||||||||||
Sbjct: 133 ctcgtcgttatcgtcgacgtggttgaccagaacagagctttggtggatgcccctgatatg 192
Query: 224 gtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatcaaa 283
| ||| |||||| |||||||| || | || |||||||| || |||||||||||
Sbjct: 193 gagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatcaat 252
Query: 284 cgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagactaag 343
||||| || |||||| | | |||| |||| ||||| | ||||||||||||| |||
Sbjct: 253 cgtgtgccaaagaagaaggcttggatcgaggcaatggaaaaggctgatgtgaagaacaag 312
Query: 344 tgggagaacagctcatggggcaagaagct 372
|||||||| ||||||||||| | ||||||
Sbjct: 313 tgggagaaaagctcatggggtaggaagct 341
>gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-54-O16 5',
mRNA sequence
Length = 387
Score = 81.8 bits (41), Expect = 2e-013
Identities = 92/109 (84%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 279 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 338
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaa 420
| ||||| |||||||| || ||||| |||| ||| ||||||||||||||
Sbjct: 339 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaa 387
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 131 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 190
Query: 224 g 224
|
Sbjct: 191 g 191
>gb|BP635805.1|BP635805 BP635805 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-02-F17 3',
mRNA sequence
Length = 466
Score = 79.8 bits (40), Expect = 7e-013
Identities = 220/280 (78%)
Strand = Plus / Minus
Query: 189 accagaacagggcacttgtggacgcccctgatatggtcaggtgccagattaacttcaaac 248
|||||||||| || | ||||| ||||||||||||| ||| |||||| ||||||||
Sbjct: 465 accagaacagagctttggtggatgcccctgatatggagaggatccagatgaacttcaaga 406
Query: 249 ggctctcacttaccgacatcaagattgacatcaaacgtgtccccaagaagtcaaccttga 308
|| | || |||||||| || ||||||||||| ||||| || |||||| | ||||
Sbjct: 405 ggttgtctcttaccgatattgtcattgacatcaaccgtgtgccaaagaagaaggctttga 346
Query: 309 tcaaggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaaga 368
|| |||| ||||| | ||||||||||||| ||||||||||| ||||||||||| | ||
Sbjct: 345 tcgaggcaatggaaaaggctgatgtgaagaacaagtgggagaaaagctcatggggtagga 286
Query: 369 agctgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgc 428
|||| || || ||||| | |||||| || | |||||||| ||||||||| |||||
Sbjct: 285 agcttatcgtgcagaaacgtagggctaaccttaacgactttgataggttcaagatcatgt 226
Query: 429 tggcaaggatcaagaggggtggtgctatcaggcaagagct 468
|||| | |||||||| | ||||| | |||||||||||||
Sbjct: 225 tggccaagatcaagaaagctggtgttgtcaggcaagagct 186
>gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-45-P07 5',
mRNA sequence
Length = 374
Score = 79.8 bits (40), Expect = 7e-013
Identities = 214/272 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 65 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 124
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || ||||| |||||||||
Sbjct: 125 aagctcgtcgttatcgtcgacgttgttgaccagaacagagcttgggtggatgcccctgat 184
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 185 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 244
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || |||||| | |||||| |||| ||||| | |||||||||||||
Sbjct: 245 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 304
Query: 341 aagtgggagaacagctcatggggcaagaagct 372
||||||||||| ||||||||||| | ||||||
Sbjct: 305 aagtgggagaaaagctcatggggtaggaagct 336
>gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C7 map mi148, complete
sequence
Length = 52784
Score = 79.8 bits (40), Expect = 7e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 329 gatgtgaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagagg 388
|||||||||| ||||||||||| || |||||||| | ||| || ||||| ||||||||
Sbjct: 8092 gatgtgaagaacaagtgggagaagagttcatggggtaggaaacttattgtgcagaagaga 8151
Query: 389 agggctgcactcagtgactttgacaggttcaaggtcatgctggc 432
|| ||||| |||| ||| ||||||||||||||| ||||| ||||
Sbjct: 8152 agagctgccctcaatgattttgacaggttcaagatcatgttggc 8195
Score = 42.1 bits (21), Expect = 0.14
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacaggg 200
||||| || ||||||||||| |||||||| |||||||
Sbjct: 7605 ctcgtggttatcgtcgatgtagtcgaccaaaacaggg 7641
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 79.8 bits (40), Expect = 7e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 329 gatgtgaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagagg 388
|||||||||| ||||||||||| || |||||||| | ||| || ||||| ||||||||
Sbjct: 8821713 gatgtgaagaacaagtgggagaagagttcatggggtaggaaacttattgtgcagaagaga 8821772
Query: 389 agggctgcactcagtgactttgacaggttcaaggtcatgctggc 432
|| ||||| |||| ||| ||||||||||||||| ||||| ||||
Sbjct: 8821773 agagctgccctcaatgattttgacaggttcaagatcatgttggc 8821816
Score = 42.1 bits (21), Expect = 0.14
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacaggg 200
||||| || ||||||||||| |||||||| |||||||
Sbjct: 8821226 ctcgtggttatcgtcgatgtagtcgaccaaaacaggg 8821262
>gb|BE523677.1|BE523677 M40D11STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M40D11 5', mRNA sequence
Length = 313
Score = 77.8 bits (39), Expect = 3e-012
Identities = 205/261 (78%)
Strand = Plus / Plus
Query: 101 ttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagactacggc 160
|||||||||| ||| ||||||||| | || || |||||||||||||| |||| | ||
Sbjct: 53 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 112
Query: 161 cgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgat 220
|||||||| |||||||| || || ||||||||||| || | ||||| |||||||||
Sbjct: 113 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 172
Query: 221 atggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagattgacatc 280
|||| ||| |||||| |||||||| || | || |||||||| || |||||||||
Sbjct: 173 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 232
Query: 281 aaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtgaagact 340
|| ||||| || ||||| | | |||||| |||| ||||| | ||||||||||| |
Sbjct: 233 aaccgtgtgccaaagaanaaagctttgatcgaggcaatggaaaaggctgatgtgaanaac 292
Query: 341 aagtgggagaacagctcatgg 361
||||||||||| |||||||||
Sbjct: 293 aagtgggagaaaagctcatgg 313
>gb|AA585838.1|AA585838 28487 Lambda-PRL2 Arabidopsis thaliana cDNA clone 107M11XP 3', mRNA
sequence
Length = 477
Score = 75.8 bits (38), Expect = 1e-011
Identities = 116/142 (81%)
Strand = Plus / Plus
Query: 327 ctgatgtgaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaaga 386
||||||||||||| ||||||||||| ||||||||||| | |||||| || || |||||
Sbjct: 176 ctgatgtgaagaccaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaac 235
Query: 387 ggagggctgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggg 446
| |||||| || | |||||||| ||||||||| ||||| |||| | |||||||| |
Sbjct: 236 gtagggctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaag 295
Query: 447 gtggtgctatcaggcaagagct 468
||||| | |||||||||||||
Sbjct: 296 ctggtgttgtcaggcaagagct 317
>gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-G07 5',
mRNA sequence
Length = 393
Score = 75.8 bits (38), Expect = 1e-011
Identities = 98/118 (83%)
Strand = Plus / Plus
Query: 312 aggctatggaggaagctgatgtgaagactaagtgggagaacagctcatggggcaagaagc 371
|||| |||||| | ||||||||||||| ||||||||||| || |||||||| | ||| |
Sbjct: 243 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 302
Query: 372 tgattgtccagaagaggagggctgcactcagtgactttgacaggttcaaggtcatgct 429
| || || ||||||| || ||||| |||| ||| ||||||||||||||| |||||||
Sbjct: 303 ttatggtgaagaagagaagagctgccctcaatgattttgacaggttcaagatcatgct 360
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 95 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 154
Query: 224 g 224
|
Sbjct: 155 g 155
>gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-10-C13 5',
mRNA sequence
Length = 359
Score = 75.8 bits (38), Expect = 1e-011
Identities = 93/110 (84%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 326 gctgatgtgaagactaagtgggagaacagctcatggggcaagaagc-tgattgtccagaa 384
||||||||||||| ||||||||||| || |||||||| | ||| | | ||||| |||||
Sbjct: 250 gctgatgtgaagaacaagtgggagaagagttcatggggtaggaaaccttattgtgcagaa 309
Query: 385 gaggagggctgcactcagtgactttgacaggttcaaggtcatgctggcaa 434
||| || ||||| |||| ||| ||||||||||||||| ||||| ||||||
Sbjct: 310 gagaagagctgccctcaatgattttgacaggttcaagatcatgttggcaa 359
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 164 ctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatg 223
||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||
Sbjct: 89 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 148
Query: 224 g 224
|
Sbjct: 149 g 149
>gb|AV789152.1|AV789152 AV789152 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-82-H02 3',
mRNA sequence
Length = 413
Score = 73.8 bits (37), Expect = 4e-011
Identities = 157/197 (79%)
Strand = Plus / Minus
Query: 272 attgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgat 331
||||||||||| ||||| || |||||| | |||||| |||| ||||| | ||||||
Sbjct: 382 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 323
Query: 332 gtgaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagg 391
||||||| ||||||||||| ||||||||||| | |||||| || || ||||| | |||
Sbjct: 322 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 263
Query: 392 gctgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggt 451
||| || | |||||||| ||||||||| ||||| |||| | |||||||| | ||||
Sbjct: 262 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 203
Query: 452 gctatcaggcaagagct 468
| | |||||||||||||
Sbjct: 202 gttgtcaggcaagagct 186
>gb|AV789575.1|AV789575 AV789575 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-84-C23 3',
mRNA sequence
Length = 401
Score = 73.8 bits (37), Expect = 4e-011
Identities = 157/197 (79%)
Strand = Plus / Minus
Query: 272 attgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgat 331
||||||||||| ||||| || |||||| | |||||| |||| ||||| | ||||||
Sbjct: 364 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 305
Query: 332 gtgaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagg 391
||||||| ||||||||||| ||||||||||| | |||||| || || ||||| | |||
Sbjct: 304 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 245
Query: 392 gctgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggt 451
||| || | |||||||| ||||||||| ||||| |||| | |||||||| | ||||
Sbjct: 244 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 185
Query: 452 gctatcaggcaagagct 468
| | |||||||||||||
Sbjct: 184 gttgtcaggcaagagct 168
>gb|AV790235.1|AV790235 AV790235 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-87-J06 3',
mRNA sequence
Length = 407
Score = 73.8 bits (37), Expect = 4e-011
Identities = 157/197 (79%)
Strand = Plus / Minus
Query: 272 attgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgat 331
||||||||||| ||||| || |||||| | |||||| |||| ||||| | ||||||
Sbjct: 382 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 323
Query: 332 gtgaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagg 391
||||||| ||||||||||| ||||||||||| | |||||| || || ||||| | |||
Sbjct: 322 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 263
Query: 392 gctgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggt 451
||| || | |||||||| ||||||||| ||||| |||| | |||||||| | ||||
Sbjct: 262 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 203
Query: 452 gctatcaggcaagagct 468
| | |||||||||||||
Sbjct: 202 gttgtcaggcaagagct 186
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 398,973
Number of Sequences: 1013581
Number of extensions: 398973
Number of successful extensions: 32001
Number of sequences better than 0.5: 126
Number of HSP's better than 0.5 without gapping: 124
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 31134
Number of HSP's gapped (non-prelim): 786
length of query: 801
length of database: 908,940,872
effective HSP length: 20
effective length of query: 781
effective length of database: 888,669,252
effective search space: 694050685812
effective search space used: 694050685812
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)