BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.1
(690 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV785880.1|AV785880 AV785880 RAFL6 Arabidopsis thaliana ... 125 1e-026
gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana... 125 1e-026
gb|BP585750.1|BP585750 BP585750 RAFL15 Arabidopsis thaliana... 125 1e-026
gb|BP627452.1|BP627452 BP627452 RAFL17 Arabidopsis thaliana... 125 1e-026
gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal ... 125 1e-026
gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal ... 125 1e-026
emb|AX506868.1| Sequence 1563 from Patent WO0216655 125 1e-026
gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, compl... 125 1e-026
emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cD... 125 1e-026
ref|NM_127604.2| Arabidopsis thaliana structural constituen... 125 1e-026
gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana ... 119 7e-025
gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana ... 119 7e-025
gb|BP594946.1|BP594946 BP594946 RAFL15 Arabidopsis thaliana... 119 7e-025
gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana... 117 3e-024
gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS... 117 3e-024
gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana... 111 2e-022
gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA... 109 6e-022
gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana ... 109 6e-022
gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana ... 109 6e-022
gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS... 109 6e-022
gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-AD... 109 6e-022
gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana ... 109 6e-022
gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana ... 109 6e-022
gb|BP587944.1|BP587944 BP587944 RAFL15 Arabidopsis thaliana... 109 6e-022
gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A1... 109 6e-022
gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRN... 109 6e-022
ref|NM_118843.2| Arabidopsis thaliana structural constituen... 109 6e-022
gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana ... 96 1e-017
gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADI... 96 1e-017
gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower... 96 1e-017
gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana ... 96 1e-017
emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cD... 96 1e-017
gb|BP577085.1|BP577085 BP577085 RAFL14 Arabidopsis thaliana... 94 4e-017
gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C... 92 1e-016
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 92 1e-016
gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana... 90 6e-016
gb|AV789152.1|AV789152 AV789152 RAFL6 Arabidopsis thaliana ... 88 2e-015
gb|AV789575.1|AV789575 AV789575 RAFL6 Arabidopsis thaliana ... 88 2e-015
gb|AV790235.1|AV790235 AV790235 RAFL6 Arabidopsis thaliana ... 88 2e-015
gb|AV820668.1|AV820668 AV820668 RAFL11 Arabidopsis thaliana... 88 2e-015
gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower... 88 2e-015
gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana... 88 2e-015
gb|BP597426.1|BP597426 BP597426 RAFL15 Arabidopsis thaliana... 88 2e-015
gb|BP635805.1|BP635805 BP635805 RAFL18 Arabidopsis thaliana... 88 2e-015
gb|BP784666.1|BP784666 BP784666 RAFL7 Arabidopsis thaliana ... 88 2e-015
gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana... 88 2e-015
gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana... 88 2e-015
gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana... 88 2e-015
gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana... 88 2e-015
gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana... 88 2e-015
gb|BP625359.1|BP625359 BP625359 RAFL17 Arabidopsis thaliana... 84 4e-014
gb|BP626679.1|BP626679 BP626679 RAFL17 Arabidopsis thaliana... 84 4e-014
gb|BP628325.1|BP628325 BP628325 RAFL17 Arabidopsis thaliana... 84 4e-014
gb|BP847862.1|BP847862 BP847862 RAFL21 Arabidopsis thaliana... 82 1e-013
gb|T22860.1|T22860 4868 Lambda-PRL2 Arabidopsis thaliana cD... 80 6e-013
gb|AV785709.1|AV785709 AV785709 RAFL6 Arabidopsis thaliana ... 80 6e-013
gb|BP567540.1|BP567540 BP567540 RAFL14 Arabidopsis thaliana... 80 6e-013
gb|BP575262.1|BP575262 BP575262 RAFL14 Arabidopsis thaliana... 80 6e-013
gb|BP575360.1|BP575360 BP575360 RAFL14 Arabidopsis thaliana... 80 6e-013
gb|BP580988.1|BP580988 BP580988 RAFL14 Arabidopsis thaliana... 80 6e-013
gb|BP641343.1|BP641343 BP641343 RAFL19 Arabidopsis thaliana... 80 6e-013
gb|BP800136.1|BP800136 BP800136 RAFL14 Arabidopsis thaliana... 80 6e-013
gb|BP860997.1|BP860997 BP860997 RAFL21 Arabidopsis thaliana... 80 6e-013
gb|AA585838.1|AA585838 28487 Lambda-PRL2 Arabidopsis thalia... 78 2e-012
gb|BP629494.1|BP629494 BP629494 RAFL17 Arabidopsis thaliana... 76 9e-012
gb|BE523677.1|BE523677 M40D11STM Arabidopsis developing see... 72 1e-010
gb|BP616173.1|BP616173 BP616173 RAFL16 Arabidopsis thaliana... 72 1e-010
gb|BP799467.1|BP799467 BP799467 RAFL14 Arabidopsis thaliana... 72 1e-010
gb|BP857725.1|BP857725 BP857725 RAFL21 Arabidopsis thaliana... 72 1e-010
gb|AI997481.1|AI997481 701554127 A. thaliana, Columbia Col-... 70 5e-010
gb|AV808368.1|AV808368 AV808368 RAFL9 Arabidopsis thaliana ... 68 2e-009
gb|BP593704.1|BP593704 BP593704 RAFL15 Arabidopsis thaliana... 68 2e-009
gb|BP594218.1|BP594218 BP594218 RAFL15 Arabidopsis thaliana... 68 2e-009
gb|BP627571.1|BP627571 BP627571 RAFL17 Arabidopsis thaliana... 68 2e-009
gb|BP634478.1|BP634478 BP634478 RAFL17 Arabidopsis thaliana... 68 2e-009
gb|BP863509.1|BP863509 BP863509 RAFL21 Arabidopsis thaliana... 68 2e-009
gb|BP591947.1|BP591947 BP591947 RAFL15 Arabidopsis thaliana... 66 9e-009
gb|BP845942.1|BP845942 BP845942 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP864372.1|BP864372 BP864372 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|BP868284.1|BP868284 BP868284 RAFL21 Arabidopsis thaliana... 66 9e-009
gb|Z25616.1|Z25616 ATTS1079 AC16H Arabidopsis thaliana cDNA... 64 3e-008
gb|Z26097.1|Z26097 ATTS1369 Grenoble-B Arabidopsis thaliana... 64 3e-008
gb|R64748.1|R64748 13252 Lambda-PRL2 Arabidopsis thaliana c... 64 3e-008
gb|AV555106.1|AV555106 AV555106 Arabidopsis thaliana green ... 64 3e-008
gb|BP610096.1|BP610096 BP610096 RAFL16 Arabidopsis thaliana... 64 3e-008
gb|BP664156.1|BP664156 BP664156 RAFL21 Arabidopsis thaliana... 64 3e-008
gb|BP668776.1|BP668776 BP668776 RAFL21 Arabidopsis thaliana... 64 3e-008
gb|BP827263.1|BP827263 BP827263 RAFL19 Arabidopsis thaliana... 64 3e-008
gb|BP845987.1|BP845987 BP845987 RAFL21 Arabidopsis thaliana... 64 3e-008
gb|BP856130.1|BP856130 BP856130 RAFL21 Arabidopsis thaliana... 64 3e-008
gb|BP860007.1|BP860007 BP860007 RAFL21 Arabidopsis thaliana... 64 3e-008
gb|BP860765.1|BP860765 BP860765 RAFL21 Arabidopsis thaliana... 64 3e-008
gb|BP861626.1|BP861626 BP861626 RAFL21 Arabidopsis thaliana... 64 3e-008
emb|BX826370.1|CNS0A41L Arabidopsis thaliana Full-length cD... 64 3e-008
gb|AV564782.1|AV564782 AV564782 Arabidopsis thaliana green ... 62 1e-007
gb|BP640700.1|BP640700 BP640700 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|BP643814.1|BP643814 BP643814 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|BP659935.1|BP659935 BP659935 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|BP578758.1|BP578758 BP578758 RAFL14 Arabidopsis thaliana... 60 5e-007
gb|BP613409.1|BP613409 BP613409 RAFL16 Arabidopsis thaliana... 60 5e-007
gb|BP665509.1|BP665509 BP665509 RAFL21 Arabidopsis thaliana... 60 5e-007
gb|BP844124.1|BP844124 BP844124 RAFL21 Arabidopsis thaliana... 60 5e-007
gb|BP849718.1|BP849718 BP849718 RAFL21 Arabidopsis thaliana... 60 5e-007
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 60 5e-007
emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome... 60 5e-007
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 60 5e-007
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 60 5e-007
gb|BP589850.1|BP589850 BP589850 RAFL15 Arabidopsis thaliana... 58 2e-006
gb|BP596545.1|BP596545 BP596545 RAFL15 Arabidopsis thaliana... 58 2e-006
gb|BP827473.1|BP827473 BP827473 RAFL19 Arabidopsis thaliana... 58 2e-006
gb|BP578366.1|BP578366 BP578366 RAFL14 Arabidopsis thaliana... 56 8e-006
gb|BP582688.1|BP582688 BP582688 RAFL14 Arabidopsis thaliana... 56 8e-006
gb|BP662569.1|BP662569 BP662569 RAFL21 Arabidopsis thaliana... 56 8e-006
gb|BP806298.1|BP806298 BP806298 RAFL16 Arabidopsis thaliana... 56 8e-006
gb|BP826835.1|BP826835 BP826835 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP843110.1|BP843110 BP843110 RAFL21 Arabidopsis thaliana... 56 8e-006
gb|BP867797.1|BP867797 BP867797 RAFL21 Arabidopsis thaliana... 56 8e-006
gb|Z18006.1|Z18006 ATTS0490 AC16H Arabidopsis thaliana cDNA... 54 3e-005
gb|BP648411.1|BP648411 BP648411 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|CB254828.1|CB254828 58-E018361-019-007-C16-T7R MPIZ-ADIS... 54 3e-005
gb|BP856452.1|BP856452 BP856452 RAFL21 Arabidopsis thaliana... 54 3e-005
gb|BP859248.1|BP859248 BP859248 RAFL21 Arabidopsis thaliana... 54 3e-005
gb|BP660581.1|BP660581 BP660581 RAFL21 Arabidopsis thaliana... 52 1e-004
gb|BP799123.1|BP799123 BP799123 RAFL14 Arabidopsis thaliana... 50 5e-004
gb|BP821710.1|BP821710 BP821710 RAFL19 Arabidopsis thaliana... 50 5e-004
gb|BP854616.1|BP854616 BP854616 RAFL21 Arabidopsis thaliana... 50 5e-004
gb|BP862318.1|BP862318 BP862318 RAFL21 Arabidopsis thaliana... 50 5e-004
gb|BP657327.1|BP657327 BP657327 RAFL19 Arabidopsis thaliana... 46 0.008
gb|BP664961.1|BP664961 BP664961 RAFL21 Arabidopsis thaliana... 46 0.008
gb|BP630153.1|BP630153 BP630153 RAFL17 Arabidopsis thaliana... 44 0.031
gb|BP670772.1|BP670772 BP670772 RAFL21 Arabidopsis thaliana... 40 0.49
gb|BP837234.1|BP837234 BP837234 RAFL19 Arabidopsis thaliana... 40 0.49
>gb|AV785880.1|AV785880 AV785880 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-M06 3',
mRNA sequence
Length = 394
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Minus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 367 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 308
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 307 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 248
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 247 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 197
>gb|BP575470.1|BP575470 BP575470 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-12-J16 3',
mRNA sequence
Length = 431
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Minus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 298 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 239
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 238 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 179
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 178 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 128
Score = 56.0 bits (28), Expect = 8e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 160 gtcgaccagaacagggctcttgtggatgcccccgacatgg 199
|||||||| |||||||| |||||||||||||| |||||||
Sbjct: 425 gtcgaccaaaacagggcacttgtggatgcccctgacatgg 386
>gb|BP585750.1|BP585750 BP585750 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-03-L15 3',
mRNA sequence
Length = 445
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Minus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 332 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtatgaaac 273
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 272 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 213
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 212 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 162
>gb|BP627452.1|BP627452 BP627452 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-08-J11 3',
mRNA sequence
Length = 364
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Minus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 331 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 272
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 271 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 212
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 211 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 161
>gb|AY065368.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 672
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 275 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 334
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 335 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 394
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 395 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 445
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 67 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 126
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 127 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 186
Query: 199 g 199
|
Sbjct: 187 g 187
>gb|AY096618.1| Arabidopsis thaliana putative 60S ribosomal protein L14 (At2g20450)
mRNA, complete cds
Length = 436
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 218 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 277
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 278 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 337
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 338 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 388
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 10 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 69
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 70 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 129
Query: 199 g 199
|
Sbjct: 130 g 130
>emb|AX506868.1| Sequence 1563 from Patent WO0216655
Length = 405
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 218 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 277
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 278 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 337
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 338 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 388
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 10 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 69
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 70 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 129
Query: 199 g 199
|
Sbjct: 130 g 130
>gb|AY085447.1| Arabidopsis thaliana clone 15198 mRNA, complete sequence
Length = 628
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 275 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 334
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 335 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 394
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 395 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 445
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 67 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 126
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 127 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 186
Query: 199 g 199
|
Sbjct: 187 g 187
>emb|BX820403.1|CNS0A7WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH2ZA05 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 580
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 249 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 308
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 309 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 368
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 369 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 419
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 41 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 100
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 101 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 160
Query: 199 g 199
|
Sbjct: 161 g 161
>ref|NM_127604.2| Arabidopsis thaliana structural constituent of ribosome AT2G20450
mRNA, complete cds
Length = 642
Score = 125 bits (63), Expect = 1e-026
Identities = 144/171 (84%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 275 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 334
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 335 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 394
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 395 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 445
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 67 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 126
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 127 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 186
Query: 199 g 199
|
Sbjct: 187 g 187
>gb|AV824370.1|AV824370 AV824370 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-M06 5',
mRNA sequence
Length = 648
Score = 119 bits (60), Expect = 7e-025
Identities = 143/171 (83%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 276 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 335
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 336 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 395
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
|| |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 396 ncaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 446
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 68 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 127
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 128 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 187
Query: 199 g 199
|
Sbjct: 188 g 188
>gb|CK118237.1|CK118237 217i19.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011I19217
5-PRIME, mRNA sequence
Length = 441
Score = 119 bits (60), Expect = 7e-025
Identities = 143/171 (83%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 205 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 264
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| | ||||||||||||| |||||||||
Sbjct: 265 ttattgtgcagaagagaagagctgccctcaatgattntgacaggttcaagatcatgttgg 324
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 325 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 375
Score = 85.7 bits (43), Expect = 9e-015
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 85 ttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgcctcgtc 144
||||||||||| ||| ||||||| || || ||||||||| |||| ||||| |||||
Sbjct: 3 ttcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaagctcgtg 62
Query: 145 gtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatgg 199
|| |||||||| || |||||||| |||||||| |||||||||||||| |||||||
Sbjct: 63 gttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatgg 117
>gb|BP594946.1|BP594946 BP594946 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-27-M14 3',
mRNA sequence
Length = 466
Score = 119 bits (60), Expect = 7e-025
Identities = 141/168 (83%)
Strand = Plus / Minus
Query: 290 caatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctga 349
|||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| || |
Sbjct: 364 caatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaactta 305
Query: 350 ttgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttggcga 409
|||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||| |
Sbjct: 304 ttgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttggcca 245
Query: 410 agatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 244 aaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 197
>gb|BP586216.1|BP586216 BP586216 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-05-H08 3',
mRNA sequence
Length = 465
Score = 117 bits (59), Expect = 3e-024
Identities = 143/171 (83%)
Strand = Plus / Minus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | |||||| |||| | |||||||||||| || |||||||| | ||| |
Sbjct: 332 aggcaatggagaaggctgatttgaagaacaagtgggagaagagttcatggggtaggaaac 273
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 272 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 213
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 212 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 162
Score = 56.0 bits (28), Expect = 8e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 160 gtcgaccagaacagggctcttgtggatgcccccgacatgg 199
|||||||| |||||||| |||||||||||||| |||||||
Sbjct: 459 gtcgaccaaaacagggcacttgtggatgcccctgacatgg 420
>gb|CB253512.1|CB253512 95-E018427-019-008-M23-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768M238Q 5-PRIME, mRNA sequence
Length = 611
Score = 117 bits (59), Expect = 3e-024
Identities = 143/171 (83%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 224 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 283
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| || ||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 284 ttattgtgcaaaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 343
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| || |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 344 ccaaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 394
Score = 81.8 bits (41), Expect = 1e-013
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 16 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 75
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||| | || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 76 ctcgtggttatcgtcaatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 135
Query: 199 g 199
|
Sbjct: 136 g 136
>gb|BP866196.1|BP866196 BP866196 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-76-N21 5',
mRNA sequence
Length = 386
Score = 111 bits (56), Expect = 2e-022
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | |||
Sbjct: 238 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaat 297
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 298 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 357
Query: 407 cgaagatcaagaggggtggt 426
| || |||||||||| ||||
Sbjct: 358 ccaaaatcaagagggctggt 377
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 29 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 88
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 89 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 148
Query: 199 g 199
|
Sbjct: 149 g 149
>gb|BE038422.1|BE038422 AA17C08 AA Arabidopsis thaliana cDNA 5' similar to ribosomal
protein l14, mRNA sequence
Length = 647
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Minus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 608 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 549
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 548 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 489
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 488 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 429
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 428 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 369
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 368 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 309
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 308 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 249
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 248 caagagcttgc 238
>gb|AV781844.1|AV781844 AV781844 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 3',
mRNA sequence
Length = 640
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Minus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 550 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 491
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 490 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 431
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 430 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 371
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 370 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 311
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 310 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 251
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 250 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 191
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 190 caagagcttgc 180
>gb|AV784036.1|AV784036 AV784036 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 3',
mRNA sequence
Length = 599
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Minus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 528 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 469
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 468 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 409
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 408 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 349
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 348 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 289
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 288 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 229
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 228 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 169
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 168 caagagcttgc 158
>gb|CB264616.1|CB264616 49-E015024-035-004-B14-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000B144Q 5-PRIME, mRNA sequence
Length = 596
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 51 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 110
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 111 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 170
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 171 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 230
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 231 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 290
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 291 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 350
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 351 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 410
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 411 caagagcttgc 421
>gb|CF651604.1|CF651604 12-L020135w-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 705
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 58 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 117
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 118 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 177
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 178 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 237
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 238 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 297
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 298 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 357
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 358 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 417
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 418 caagagcttgc 428
>gb|CK118127.1|CK118127 218a16.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011A16218
5-PRIME, mRNA sequence
Length = 630
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 74 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 133
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 134 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 193
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 194 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 253
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 254 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 313
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 314 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 373
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 374 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 433
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 434 caagagcttgc 444
>gb|CK119040.1|CK119040 214l04.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L04214
5-PRIME, mRNA sequence
Length = 604
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 62 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 121
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 122 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 181
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 182 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 241
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 242 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 301
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 302 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 361
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 362 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 421
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 422 caagagcttgc 432
>gb|BP587944.1|BP587944 BP587944 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-44-H22 3',
mRNA sequence
Length = 406
Score = 109 bits (55), Expect = 6e-022
Identities = 142/171 (83%)
Strand = Plus / Minus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
|||| |||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 367 aggccatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 308
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 307 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttgg 248
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| | |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 247 cccaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 197
>gb|AF378869.1|AF378869 Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 619
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 70 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 129
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 130 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 189
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 190 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 249
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 250 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 309
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 310 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 369
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 370 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 429
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 430 caagagcttgc 440
>gb|AY050473.1| Arabidopsis thaliana AT4g27090/T24A18_40 mRNA, complete cds
Length = 405
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 7 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 66
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 67 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 126
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 127 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 186
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 187 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 246
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 247 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 306
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 307 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 366
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 367 caagagcttgc 377
>ref|NM_118843.2| Arabidopsis thaliana structural constituent of ribosome AT4G27090
mRNA, complete cds
Length = 668
Score = 109 bits (55), Expect = 6e-022
Identities = 292/371 (78%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 71 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 130
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 131 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 190
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 191 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 250
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 251 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 310
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 311 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 370
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcagg 435
|| |||||||| ||||||||| |||||||||| |||||||||| | ||||| |||||
Sbjct: 371 aacgactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcagg 430
Query: 436 caagagcttgc 446
|||||||||||
Sbjct: 431 caagagcttgc 441
>gb|AV821405.1|AV821405 AV821405 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-M12 5',
mRNA sequence
Length = 677
Score = 95.6 bits (48), Expect = 1e-017
Identities = 279/356 (78%)
Strand = Plus / Plus
Query: 91 gagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgcctcgtcgtcatc 150
||||||||| |||| || |||||||||||||| | || |||| |||||||| |||
Sbjct: 88 gagatcgggagagtagcacttgtgaactacggagaagatcatggaaagctcgtcgttatc 147
Query: 151 gtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatggttcgttgccaa 210
|||||||| || ||||||||||| ||| | ||||||||||| || |||| | |||
Sbjct: 148 gtcgacgttgttgaccagaacagagctttggtggatgcccctgatatggagaggatccag 207
Query: 211 atgaacttcaagcggctttccctgactgacatcaagattgacattaaacgtgtcccaaag 270
|||||||||||| || | || || || || || |||||||| || ||||| ||||||
Sbjct: 208 atgaacttcaagaggttgtctcttaccgatattgtcattgacatcaaccgtgtgccaaag 267
Query: 271 aagactacactgatcaaggcaatggaggaagctgatgtgaaaagcaagtgggagaatagc 330
|||| | ||||| |||||||||| | ||||||||||| | |||||||||||| |||
Sbjct: 268 aagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaacaagtgggagaaaagc 327
Query: 331 tcatggggcaagaagctgattgttcagaagaggagagcatcactcaatgactttgacagg 390
|||||||| | |||||| || || ||||| | || || || || |||||||| |||
Sbjct: 328 tcatggggtaggaagcttatcgtgcagaaacgtagggctaaccttaacgactttgatagg 387
Query: 391 ttcaaggtcatgttggcgaagatcaagaggggtggtgccatcaggcaagagcttgc 446
|||||| |||||||||| |||||||||| | ||||| ||||||||||||||||
Sbjct: 388 ttcaagatcatgttggccaagatcaagaaagctggtgttgtcaggcaagagcttgc 443
>gb|CF651603.1|CF651603 12-L020135-066-001-G03-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001G031Q 5-PRIME, mRNA sequence
Length = 397
Score = 95.6 bits (48), Expect = 1e-017
Identities = 267/340 (78%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 58 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 117
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 118 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 177
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 178 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 237
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 238 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 297
Query: 316 aagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactc 375
||||||||||| ||||||||||| | |||||| || || ||||| | || || ||
Sbjct: 298 aagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaacctt 357
Query: 376 aatgactttgacaggttcaaggtcatgttggcgaagatca 415
|| |||||||| ||||||||| |||||||||| |||||||
Sbjct: 358 aacgactttgataggttcaagatcatgttggccaagatca 397
>gb|AV534837.1|AV534837 AV534837 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB086g02F 3', mRNA sequence
Length = 512
Score = 95.6 bits (48), Expect = 1e-017
Identities = 243/308 (78%)
Strand = Plus / Minus
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| || |||
Sbjct: 466 ctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgatatg 407
Query: 199 gttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacattaaa 258
| | ||| |||||||||||| || | || || || || || |||||||| ||
Sbjct: 406 gagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatcaac 347
Query: 259 cgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagcaag 318
||||| |||||||||| | ||||| |||||||||| | ||||||||||| | ||||
Sbjct: 346 cgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaacaag 287
Query: 319 tgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactcaat 378
|||||||| ||||||||||| | |||||| || || ||||| | || || || ||
Sbjct: 286 tgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagggctaaccttaac 227
Query: 379 gactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcaggcaa 438
|||||||| ||||||||| |||||||||| |||||||||| | ||||| ||||||||
Sbjct: 226 gactttgataggttcaagatcatgttggccaagatcaagaaagctggtgttgtcaggcaa 167
Query: 439 gagcttgc 446
||||||||
Sbjct: 166 gagcttgc 159
>gb|BP560955.2|BP560955 BP560955 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-15-J03 5',
mRNA sequence
Length = 617
Score = 95.6 bits (48), Expect = 1e-017
Identities = 279/356 (78%)
Strand = Plus / Plus
Query: 91 gagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgcctcgtcgtcatc 150
||||||||| |||| || |||||||||||||| | || |||| |||||||| |||
Sbjct: 84 gagatcgggagagtagcacttgtgaactacggagaagatcatggaaagctcgtcgttatc 143
Query: 151 gtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatggttcgttgccaa 210
|||||||| || ||||||||||| ||| | ||||||||||| || |||| | |||
Sbjct: 144 gtcgacgttgttgaccagaacagagctttggtggatgcccctgatatggagaggatccag 203
Query: 211 atgaacttcaagcggctttccctgactgacatcaagattgacattaaacgtgtcccaaag 270
|||||||||||| || | || || || || || |||||||| || ||||| ||||||
Sbjct: 204 atgaacttcaagaggttgtctcttaccgatattgtcattgacatcaaccgtgtgccaaag 263
Query: 271 aagactacactgatcaaggcaatggaggaagctgatgtgaaaagcaagtgggagaatagc 330
|||| | ||||| |||||||||| | ||||||||||| | |||||||||||| |||
Sbjct: 264 aagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaacaagtgggagaaaagc 323
Query: 331 tcatggggcaagaagctgattgttcagaagaggagagcatcactcaatgactttgacagg 390
|||||||| | |||||| || || ||||| | || || || || |||||||| |||
Sbjct: 324 tcatggggtaggaagcttatcgtgcagaaacgtagggctaaccttaacgactttgatagg 383
Query: 391 ttcaaggtcatgttggcgaagatcaagaggggtggtgccatcaggcaagagcttgc 446
|||||| |||||||||| |||||||||| | ||||| ||||||||||||||||
Sbjct: 384 ttcaagatcatgttggccaagatcaagaaagctggtgttgtcaggcaagagcttgc 439
>emb|BX818834.1|CNS0A8VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB17ZH01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 586
Score = 95.6 bits (48), Expect = 1e-017
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | |||||||| || | ||||||||| || || |||||||| | ||| |
Sbjct: 216 aggcaatggagaaggctgatgttaagaacaagtgggaaaagagttcatggggtaggaaac 275
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||| ||||||||| ||||| | |||||||| ||||||||||||||| |||||||||
Sbjct: 276 ttatttttcagaagaaaagagctgccctcaatgattttgacaggttcaagatcatgttgg 335
Query: 407 cgaagatcaagaggggtggt 426
| || |||||||||| ||||
Sbjct: 336 ccaaaatcaagagggctggt 355
Score = 65.9 bits (33), Expect = 9e-009
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||| ||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 8 aagagattcgtggggattgggggagtggcgctcgttaactacggcgaggattatggaaag 67
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccc 191
||||| || |||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 68 ctcgtggttatcgtcgatgtagttgaccaaaacagggcacttgtggatgcccc 120
>gb|BP577085.1|BP577085 BP577085 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-95-E17 3',
mRNA sequence
Length = 404
Score = 93.7 bits (47), Expect = 4e-017
Identities = 140/171 (81%)
Strand = Plus / Minus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
|||| |||||| | ||||||||||| | | |||||||||| || |||||||| | ||| |
Sbjct: 298 aggccatggagaaggctgatgtgaagaaccagtgggagaagagttcatggggtaggaaac 239
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttgg 406
| ||||| |||||||| ||||| | ||| |||| ||||||||||||||| |||||||||
Sbjct: 238 ttattgtgcagaagagaagagctgccctccatgattttgacaggttcaagatcatgttgg 179
Query: 407 cgaagatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaa 457
| | |||||||||| |||| | ||||| |||||||||||||| ||||
Sbjct: 178 cccaaatcaagagggctggtattgtgaggcaggagcttgctaagctaaaaa 128
>gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C7 map mi148, complete
sequence
Length = 52784
Score = 91.7 bits (46), Expect = 1e-016
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 304 gatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagagg 363
|||||||| | |||||||||||| || |||||||| | ||| || ||||| ||||||||
Sbjct: 8092 gatgtgaagaacaagtgggagaagagttcatggggtaggaaacttattgtgcagaagaga 8151
Query: 364 agagcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaag 417
||||| | |||||||| ||||||||||||||| |||||||||| || ||||||
Sbjct: 8152 agagctgccctcaatgattttgacaggttcaagatcatgttggccaaaatcaag 8205
Score = 58.0 bits (29), Expect = 2e-006
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 7545 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 7604
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
||||| || |||||||| || |||||||| |||||||
Sbjct: 7605 ctcgtggttatcgtcgatgtagtcgaccaaaacaggg 7641
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 91.7 bits (46), Expect = 1e-016
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 304 gatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagagg 363
|||||||| | |||||||||||| || |||||||| | ||| || ||||| ||||||||
Sbjct: 8821713 gatgtgaagaacaagtgggagaagagttcatggggtaggaaacttattgtgcagaagaga 8821772
Query: 364 agagcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaag 417
||||| | |||||||| ||||||||||||||| |||||||||| || ||||||
Sbjct: 8821773 agagctgccctcaatgattttgacaggttcaagatcatgttggccaaaatcaag 8821826
Score = 58.0 bits (29), Expect = 2e-006
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 8821166 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 8821225
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
||||| || |||||||| || |||||||| |||||||
Sbjct: 8821226 ctcgtggttatcgtcgatgtagtcgaccaaaacaggg 8821262
>gb|BP842465.1|BP842465 BP842465 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-54-O16 5',
mRNA sequence
Length = 387
Score = 89.7 bits (45), Expect = 6e-016
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
||||||||||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 279 aggcaatggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 338
Query: 347 tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaa 395
| ||||| |||||||| ||||| | |||||||| ||||||||||||||
Sbjct: 339 ttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaa 387
Score = 89.7 bits (45), Expect = 6e-016
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 79 aagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgc 138
||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||
Sbjct: 71 aagagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaag 130
Query: 139 ctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatg 198
||||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 131 ctcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatg 190
Query: 199 g 199
|
Sbjct: 191 g 191
>gb|AV789152.1|AV789152 AV789152 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-82-H02 3',
mRNA sequence
Length = 413
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 382 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 323
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 322 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 263
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 262 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 203
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 202 gttgtcaggcaagagcttgc 183
>gb|AV789575.1|AV789575 AV789575 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-84-C23 3',
mRNA sequence
Length = 401
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 364 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 305
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 304 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 245
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 244 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 185
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 184 gttgtcaggcaagagcttgc 165
>gb|AV790235.1|AV790235 AV790235 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-87-J06 3',
mRNA sequence
Length = 407
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 382 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 323
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 322 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 263
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 262 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 203
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 202 gttgtcaggcaagagcttgc 183
>gb|AV820668.1|AV820668 AV820668 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-K13 3',
mRNA sequence
Length = 420
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 383 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 324
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 323 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 264
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 263 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 204
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 203 gttgtcaggcaagagcttgc 184
>gb|AV531951.1|AV531951 AV531951 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB033c09F 3', mRNA sequence
Length = 476
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 388 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 329
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 328 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 269
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 268 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 209
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 208 gttgtcaggcaagagcttgc 189
>gb|BP586511.1|BP586511 BP586511 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-06-J22 3',
mRNA sequence
Length = 445
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 357 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 298
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 297 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 238
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 237 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 178
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 177 gttgtcaggcaagagcttgc 158
>gb|BP597426.1|BP597426 BP597426 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-39-G17 3',
mRNA sequence
Length = 433
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 381 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 322
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 321 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 262
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 261 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 202
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 201 gttgtcaggcaagagcttgc 182
>gb|BP635805.1|BP635805 BP635805 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-02-F17 3',
mRNA sequence
Length = 466
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 382 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 323
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 322 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 263
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 262 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 203
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 202 gttgtcaggcaagagcttgc 183
>gb|BP784666.1|BP784666 BP784666 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-91-L19 3',
mRNA sequence
Length = 426
Score = 87.7 bits (44), Expect = 2e-015
Identities = 161/200 (80%)
Strand = Plus / Minus
Query: 247 attgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat 306
|||||||| || ||||| |||||||||| | ||||| |||||||||| | ||||||
Sbjct: 365 attgacatcaaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgat 306
Query: 307 gtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggaga 366
||||| | |||||||||||| ||||||||||| | |||||| || || ||||| | ||
Sbjct: 305 gtgaagaacaagtgggagaaaagctcatggggtaggaagcttatcgtgcagaaacgtagg 246
Query: 367 gcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggt 426
|| || || |||||||| ||||||||| |||||||||| |||||||||| | ||||
Sbjct: 245 gctaaccttaacgactttgataggttcaagatcatgttggccaagatcaagaaagctggt 186
Query: 427 gccatcaggcaagagcttgc 446
| ||||||||||||||||
Sbjct: 185 gttgtcaggcaagagcttgc 166
>gb|BP816684.1|BP816684 BP816684 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-42-L13 5',
mRNA sequence
Length = 407
Score = 87.7 bits (44), Expect = 2e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 68 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 127
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 128 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 187
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 188 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 247
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 248 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 307
Query: 316 aagtgggagaatagctcatggggcaagaagct 347
||||||||||| ||||||||||| | ||||||
Sbjct: 308 aagtgggagaaaagctcatggggtaggaagct 339
>gb|BP843574.1|BP843574 BP843574 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-87-E19 5',
mRNA sequence
Length = 385
Score = 87.7 bits (44), Expect = 2e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 66 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 125
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 126 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 185
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 186 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 245
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 246 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 305
Query: 316 aagtgggagaatagctcatggggcaagaagct 347
||||||||||| ||||||||||| | ||||||
Sbjct: 306 aagtgggagaaaagctcatggggtaggaagct 337
>gb|BP849678.1|BP849678 BP849678 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-10-C13 5',
mRNA sequence
Length = 359
Score = 87.7 bits (44), Expect = 2e-015
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 80 agaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggccgcc 139
|||| ||||||||||| ||| ||||||| || || ||||||||| |||| ||||| |
Sbjct: 30 agagattcgtggagattgggagagtggcgctcgttaactacggcgaggattatggaaagc 89
Query: 140 tcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatgg 199
|||| || |||||||| || |||||||| |||||||| |||||||||||||| |||||||
Sbjct: 90 tcgtggttatcgtcgatgtagtcgaccaaaacagggcacttgtggatgcccctgacatgg 149
Score = 83.8 bits (42), Expect = 4e-014
Identities = 103/122 (84%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 287 aggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagc 346
|||||| |||| | ||||||||||| | |||||||||||| || |||||||| | ||| |
Sbjct: 236 aggcaagggagaaggctgatgtgaagaacaagtgggagaagagttcatggggtaggaaac 295
Query: 347 -tgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttg 405
| ||||| |||||||| ||||| | |||||||| ||||||||||||||| ||||||||
Sbjct: 296 cttattgtgcagaagagaagagctgccctcaatgattttgacaggttcaagatcatgttg 355
Query: 406 gc 407
||
Sbjct: 356 gc 357
>gb|BP853658.1|BP853658 BP853658 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-A08 5',
mRNA sequence
Length = 397
Score = 87.7 bits (44), Expect = 2e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||| ||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 66 ttcaagaggtacgttgagatcgggagagtagcacttgtgaactacggagaagatcatgga 125
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| | ||||||||||| ||
Sbjct: 126 aagctcgtcgttatcgtcgacgttgttgaccagaacagagctttggtggatgcccctgat 185
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 186 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 245
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 246 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 305
Query: 316 aagtgggagaatagctcatggggcaagaagct 347
||||||||||| ||||||||||| | ||||||
Sbjct: 306 aagtgggagaaaagctcatggggtaggaagct 337
>gb|BP864490.1|BP864490 BP864490 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-G16 5',
mRNA sequence
Length = 384
Score = 87.7 bits (44), Expect = 2e-015
Identities = 215/272 (79%)
Strand = Plus / Plus
Query: 76 ttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatggc 135
|||||||||| ||||||||||||| |||| || |||||||||||||| | || ||||
Sbjct: 67 ttcaagaggtacgtggagatcgggagagtagcacttgtgaactacggagaagatcatgga 126
Query: 136 cgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgac 195
|||||||| ||||||||||| || ||||||||||| ||| ||||||||||| ||
Sbjct: 127 aagctcgtcgttatcgtcgacgttgttgaccagaacagagcttgggtggatgcccctgat 186
Query: 196 atggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacatt 255
|||| | ||| |||||||||||| || | || || || || || ||||||||
Sbjct: 187 atggagaggatccagatgaacttcaagaggttgtctcttaccgatattgtcattgacatc 246
Query: 256 aaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagc 315
|| ||||| |||||||||| | ||||| |||||||||| | ||||||||||| | |
Sbjct: 247 aaccgtgtgccaaagaagaaggctttgatcgaggcaatggaaaaggctgatgtgaagaac 306
Query: 316 aagtgggagaatagctcatggggcaagaagct 347
||||||||||| ||||||||||| | ||||||
Sbjct: 307 aagtgggagaaaagctcatggggtaggaagct 338
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 354,202
Number of Sequences: 1013581
Number of extensions: 354202
Number of successful extensions: 27216
Number of sequences better than 0.5: 132
Number of HSP's better than 0.5 without gapping: 125
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 26431
Number of HSP's gapped (non-prelim): 757
length of query: 690
length of database: 908,940,872
effective HSP length: 20
effective length of query: 670
effective length of database: 888,669,252
effective search space: 595408398840
effective search space used: 595408398840
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)