BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738955.2.1
(1271 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV824246.1|AV824246 AV824246 RAFL6 Arabidopsis thaliana ... 76 2e-011
gb|BP808794.1|BP808794 BP808794 RAFL16 Arabidopsis thaliana... 76 2e-011
gb|BP851619.1|BP851619 BP851619 RAFL21 Arabidopsis thaliana... 76 2e-011
gb|AY090368.1| Arabidopsis thaliana At2g37640/F13M22.14 mRN... 76 2e-011
gb|AY122898.1| Arabidopsis thaliana At2g37640/F13M22.14 mRN... 76 2e-011
emb|AX651740.1| Sequence 581 from Patent WO03000898 76 2e-011
ref|NM_129320.3| Arabidopsis thaliana ATEXPA3 (ARABIDOPSIS ... 76 2e-011
gb|BP824631.1|BP824631 BP824631 RAFL19 Arabidopsis thaliana... 74 7e-011
gb|N37536.1|N37536 18763 Lambda-PRL2 Arabidopsis thaliana c... 70 1e-009
emb|BX821634.1|CNS0A9AF Arabidopsis thaliana Full-length cD... 68 4e-009
gb|CW801616.1|CW801616 WiscDsLox495F06 Arabidopsis thaliana... 66 2e-008
gb|CB264576.1|CB264576 53-E014659-035-002-I14-T7R MPIZ-ADIS... 66 2e-008
gb|AV439490.1|AV439490 AV439490 Arabidopsis thaliana above-... 66 2e-008
gb|AV517928.1|AV517928 AV517928 Arabidopsis thaliana aboveg... 66 2e-008
emb|AX651780.1| Sequence 631 from Patent WO03000898 66 2e-008
dbj|AB025615.1| Arabidopsis thaliana genomic DNA, chromosom... 66 2e-008
gb|U30478.1|ATU30478 Arabidopsis thaliana expansin At-EXPA5... 66 2e-008
emb|CQ805978.1| Sequence 2389 from Patent WO2004035798 66 2e-008
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 66 2e-008
ref|NM_113824.2| Arabidopsis thaliana ATEXPA5 (ARABIDOPSIS ... 66 2e-008
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 66 2e-008
gb|AY088179.1| Arabidopsis thaliana clone 42551 mRNA, compl... 62 3e-007
ref|NM_125015.1| Arabidopsis thaliana ATEXPA14 (ARABIDOPSIS... 62 3e-007
gb|BP808070.1|BP808070 BP808070 RAFL16 Arabidopsis thaliana... 60 1e-006
gb|AY064035.1| Arabidopsis thaliana putative expansin At-EX... 58 4e-006
emb|BX823143.1|CNS0A752 Arabidopsis thaliana Full-length cD... 58 4e-006
emb|BX822037.1|CNS0A93W Arabidopsis thaliana Full-length cD... 58 4e-006
dbj|AB010692.1| Arabidopsis thaliana genomic DNA, chromosom... 58 4e-006
gb|U30481.3|ATU30481 Arabidopsis thaliana expansin At-EXPA2... 58 4e-006
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 58 4e-006
ref|NM_120611.2| Arabidopsis thaliana ATEXPA2 (ARABIDOPSIS ... 58 4e-006
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 58 4e-006
gb|AV824249.1|AV824249 AV824249 RAFL6 Arabidopsis thaliana ... 56 2e-005
gb|CK119406.1|CK119406 212o22.p1 AtM1 Arabidopsis thaliana ... 56 2e-005
gb|BE529402.1|BE529402 M74M20STM Arabidopsis developing see... 54 6e-005
gb|AV826552.1|AV826552 AV826552 RAFL8 Arabidopsis thaliana ... 54 6e-005
gb|CB258037.1|CB258037 74-E011082-014-003-D19-T7R MPIZ-ADIS... 54 6e-005
gb|BX840109.1|BX840109 BX840109 Arabidopsis thaliana Hormon... 54 6e-005
gb|AV551490.1|AV551490 AV551490 Arabidopsis thaliana roots ... 54 6e-005
gb|CF774488.1|CF774488 AG_FSL_37G10 Arabidopsis ag-1 35S:AG... 54 6e-005
gb|CB253351.1|CB253351 03-E010742-019-001-F13-T7R MPIZ-ADIS... 54 6e-005
gb|CB254578.1|CB254578 65-E018437-019-009-A17-T7R MPIZ-ADIS... 54 6e-005
gb|BP796889.1|BP796889 BP796889 RAFL14 Arabidopsis thaliana... 54 6e-005
gb|BP797885.1|BP797885 BP797885 RAFL14 Arabidopsis thaliana... 54 6e-005
gb|BP820825.1|BP820825 BP820825 RAFL19 Arabidopsis thaliana... 54 6e-005
gb|AF410277.1|AF410277 Arabidopsis thaliana At2g39700/F17A1... 54 6e-005
gb|AY062683.1| Arabidopsis thaliana putative expansin (At2g... 54 6e-005
gb|AY093338.1| Arabidopsis thaliana putative expansin (At2g... 54 6e-005
gb|AY072167.1| Arabidopsis thaliana putative expansin prote... 54 6e-005
gb|AY117342.1| Arabidopsis thaliana putative expansin prote... 54 6e-005
emb|AX505394.1| Sequence 89 from Patent WO0216655 54 6e-005
emb|AX506374.1| Sequence 1069 from Patent WO0216655 54 6e-005
gb|AY085719.1| Arabidopsis thaliana clone 17353 mRNA, compl... 54 6e-005
gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M... 54 6e-005
emb|BX818782.1|CNS0A82M Arabidopsis thaliana Full-length cD... 54 6e-005
emb|BX820188.1|CNS0A9CV Arabidopsis thaliana Full-length cD... 54 6e-005
emb|BX821366.1|CNS0A97J Arabidopsis thaliana Full-length cD... 54 6e-005
emb|BX820349.1|CNS0A9O1 Arabidopsis thaliana Full-length cD... 54 6e-005
emb|BX818958.1|CNS0A9YC Arabidopsis thaliana Full-length cD... 54 6e-005
ref|NM_126361.3| Arabidopsis thaliana ATEXPA15 (ARABIDOPSIS... 54 6e-005
ref|NM_129526.2| Arabidopsis thaliana ATEXPA4 (ARABIDOPSIS ... 54 6e-005
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 54 6e-005
dbj|AK175875.1| Arabidopsis thaliana mRNA for expansin-like... 50 0.001
emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome... 50 0.001
ref|NM_115407.2| Arabidopsis thaliana ATEXPA16 (ARABIDOPSIS... 50 0.001
gb|AA042239.1|AA042239 24560 CD4-13 Arabidopsis thaliana cD... 48 0.004
gb|AV831530.1|AV831530 AV831530 RAFL9 Arabidopsis thaliana ... 48 0.004
gb|AV536668.1|AV536668 AV536668 Arabidopsis thaliana liquid... 48 0.004
gb|BP806706.1|BP806706 BP806706 RAFL16 Arabidopsis thaliana... 48 0.004
gb|BP837993.1|BP837993 BP837993 RAFL19 Arabidopsis thaliana... 48 0.004
gb|BP840903.1|BP840903 BP840903 RAFL19 Arabidopsis thaliana... 48 0.004
gb|BP856066.1|BP856066 BP856066 RAFL21 Arabidopsis thaliana... 48 0.004
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 48 0.004
gb|AF083687.1| Arabidopsis thaliana clone sps111 unknown mRNA 48 0.004
gb|AF083782.1| Arabidopsis thaliana clone sps811 unknown mRNA 48 0.004
gb|AY080738.1| Arabidopsis thaliana At1g20190 mRNA sequence 48 0.004
gb|AF332436.1| Arabidopsis thaliana clone C00124 (e) putati... 48 0.004
gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis ... 48 0.004
dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosom... 48 0.004
emb|CQ805880.1| Sequence 2291 from Patent WO2004035798 48 0.004
ref|NM_101872.2| Arabidopsis thaliana ATEXPA11 (ARABIDOPSIS... 48 0.004
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 48 0.004
gb|AV827688.1|AV827688 AV827688 RAFL9 Arabidopsis thaliana ... 46 0.015
gb|AV828357.1|AV828357 AV828357 RAFL9 Arabidopsis thaliana ... 46 0.015
gb|AV831130.1|AV831130 AV831130 RAFL9 Arabidopsis thaliana ... 46 0.015
gb|AV439843.1|AV439843 AV439843 Arabidopsis thaliana above-... 46 0.015
gb|AV524500.1|AV524500 AV524500 Arabidopsis thaliana aboveg... 46 0.015
gb|AV524924.2|AV524924 AV524924 Arabidopsis thaliana aboveg... 46 0.015
gb|AV524938.2|AV524938 AV524938 Arabidopsis thaliana aboveg... 46 0.015
gb|AV565496.1|AV565496 AV565496 Arabidopsis thaliana green ... 46 0.015
gb|CB254180.1|CB254180 77-E010934-019-003-J20-T7R MPIZ-ADIS... 46 0.015
gb|BP796409.1|BP796409 BP796409 RAFL5 Arabidopsis thaliana ... 46 0.015
gb|BP797632.1|BP797632 BP797632 RAFL14 Arabidopsis thaliana... 46 0.015
gb|BP797777.1|BP797777 BP797777 RAFL14 Arabidopsis thaliana... 46 0.015
gb|BP820492.1|BP820492 BP820492 RAFL19 Arabidopsis thaliana... 46 0.015
gb|BP841091.1|BP841091 BP841091 RAFL19 Arabidopsis thaliana... 46 0.015
gb|BP844728.1|BP844728 BP844728 RAFL21 Arabidopsis thaliana... 46 0.015
gb|BP858073.1|BP858073 BP858073 RAFL21 Arabidopsis thaliana... 46 0.015
gb|BP860147.1|BP860147 BP860147 RAFL21 Arabidopsis thaliana... 46 0.015
gb|BP868335.1|BP868335 BP868335 RAFL21 Arabidopsis thaliana... 46 0.015
gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 46 0.015
gb|AY052247.1| Arabidopsis thaliana At1g26770/T24P13_14 mRN... 46 0.015
gb|AY060512.1| Arabidopsis thaliana At1g26770/T24P13_14 mRN... 46 0.015
gb|AF360291.1| Arabidopsis thaliana putative expansin prote... 46 0.015
gb|AY051047.1| Arabidopsis thaliana putative expansin prote... 46 0.015
emb|AX505396.1| Sequence 91 from Patent WO0216655 46 0.015
emb|AX506351.1| Sequence 1046 from Patent WO0216655 46 0.015
gb|AY085242.1| Arabidopsis thaliana clone 14132 mRNA, compl... 46 0.015
gb|AY089063.1| Arabidopsis thaliana clone 255048 mRNA, comp... 46 0.015
gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis tha... 46 0.015
gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BA... 46 0.015
emb|BX815073.1|CNS0ABGA Arabidopsis thaliana Full-length cD... 46 0.015
emb|BX815362.1|CNS0ABIP Arabidopsis thaliana Full-length cD... 46 0.015
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 46 0.015
gb|U30476.1|ATU30476 Arabidopsis thaliana expansin At-EXPA1... 46 0.015
gb|AF229437.1| Arabidopsis thaliana expansin 10 (EXPA10) mR... 46 0.015
gb|AF229431.1| Arabidopsis thaliana expansin 10 (EXPA10) ge... 46 0.015
emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome... 46 0.015
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 46 0.015
ref|NM_116393.1| Arabidopsis thaliana ATEXPA17 (ARABIDOPSIS... 46 0.015
ref|NM_105622.2| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS ... 46 0.015
ref|NM_179537.1| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS ... 46 0.015
ref|NM_179538.1| Arabidopsis thaliana ATEXPA1 (ARABIDOPSIS ... 46 0.015
ref|NM_102440.3| Arabidopsis thaliana ATEXPA10 (ARABIDOPSIS... 46 0.015
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 46 0.015
gb|CW835871.1|CW835871 ET6459.Ds3.03.14.00.b.239 Arabidopsi... 44 0.059
gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M... 44 0.059
emb|AJ595013.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.23
emb|BX531046.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.23
emb|BX531047.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.23
gb|CW841666.1|CW841666 ET11464.Ds5.04.02.2003.jw86.430 Arab... 42 0.23
gb|Z37585.1|Z37585 ATTS4050 Strasbourg-A Arabidopsis thalia... 42 0.23
gb|AI999398.1|AI999398 701555702 A. thaliana, Columbia Col-... 42 0.23
gb|BE038703.1|BE038703 AB04C11 AB Arabidopsis thaliana cDNA... 42 0.23
gb|BU635169.1|BU635169 016F09 Infected Arabidopsis Leaf Ara... 42 0.23
gb|BP607883.1|BP607883 BP607883 RAFL16 Arabidopsis thaliana... 42 0.23
gb|CB253996.1|CB253996 81-E018427-019-008-A21-T7R MPIZ-ADIS... 42 0.23
gb|BP804183.1|BP804183 BP804183 RAFL14 Arabidopsis thaliana... 42 0.23
gb|BP811357.1|BP811357 BP811357 RAFL16 Arabidopsis thaliana... 42 0.23
emb|BX294461.1| Arabidopsis thaliana transposon insertion S... 42 0.23
gb|AC003674.3| Arabidopsis thaliana chromosome 2 clone F17A... 42 0.23
emb|BX816448.1|CNS0ADWQ Arabidopsis thaliana Full-length cD... 42 0.23
>gb|AV824246.1|AV824246 AV824246 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-16-I08 5', mRNA
sequence
Length = 624
Score = 75.8 bits (38), Expect = 2e-011
Identities = 116/142 (81%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 287 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 228
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||||||||| || |||||||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 227 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccaccgtagaaa 168
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 167 gtggcgtgtgcattctgccacg 146
>gb|BP808794.1|BP808794 BP808794 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-19-D02 5',
mRNA sequence
Length = 390
Score = 75.8 bits (38), Expect = 2e-011
Identities = 116/142 (81%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 286 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 227
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||||||||| || |||||||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 226 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccaccgtagaaa 167
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 166 gtggcgtgtgcattctgccacg 145
>gb|BP851619.1|BP851619 BP851619 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-A07 5',
mRNA sequence
Length = 393
Score = 75.8 bits (38), Expect = 2e-011
Identities = 116/142 (81%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 286 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 227
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||||||||| || |||||||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 226 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccaccgtagaaa 167
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 166 gtggcgtgtgcattctgccacg 145
>gb|AY090368.1| Arabidopsis thaliana At2g37640/F13M22.14 mRNA, complete cds
Length = 1099
Score = 75.8 bits (38), Expect = 2e-011
Identities = 116/142 (81%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 286 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 227
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||||||||| || |||||||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 226 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccaccgtagaaa 167
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 166 gtggcgtgtgcattctgccacg 145
>gb|AY122898.1| Arabidopsis thaliana At2g37640/F13M22.14 mRNA, complete cds
Length = 789
Score = 75.8 bits (38), Expect = 2e-011
Identities = 116/142 (81%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 245 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 186
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||||||||| || |||||||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 185 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccaccgtagaaa 126
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 125 gtggcgtgtgcattctgccacg 104
>emb|AX651740.1| Sequence 581 from Patent WO03000898
Length = 789
Score = 75.8 bits (38), Expect = 2e-011
Identities = 116/142 (81%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 245 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 186
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||||||||| || |||||||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 185 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccaccgtagaaa 126
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 125 gtggcgtgtgcattctgccacg 104
>ref|NM_129320.3| Arabidopsis thaliana ATEXPA3 (ARABIDOPSIS THALIANA EXPANSIN A3)
AT2G37640 (ATEXPA3) mRNA, complete cds
Length = 1202
Score = 75.8 bits (38), Expect = 2e-011
Identities = 116/142 (81%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 286 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 227
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||||||||| || |||||||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 226 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccaccgtagaaa 167
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 166 gtggcgtgtgcattctgccacg 145
>gb|BP824631.1|BP824631 BP824631 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-10-D03 5',
mRNA sequence
Length = 378
Score = 73.8 bits (37), Expect = 7e-011
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 1032 gctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgcc 1091
|||||||| ||||||||| || |||||||||||||| ||||| || ||||| | ||| ||
Sbjct: 231 gctgtacaagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccacc 172
Query: 1092 gtagaacgtggcgtgggcgctctgccacg 1120
|||||| |||||||| || |||||||||
Sbjct: 171 gtagaaagtggcgtgtgcattctgccacg 143
>gb|N37536.1|N37536 18763 Lambda-PRL2 Arabidopsis thaliana cDNA clone 214G4T7, mRNA
sequence
Length = 533
Score = 69.9 bits (35), Expect = 1e-009
Identities = 115/142 (80%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 269 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 210
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||||||||| || |||||||||||||| ||||| || |||| | ||| ||||||||
Sbjct: 209 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtnactgccaccgtagaaa 150
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 149 gtggcgtgtgcattctgccacg 128
>emb|BX821634.1|CNS0A9AF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL5ZD10 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 986
Score = 67.9 bits (34), Expect = 4e-009
Identities = 115/142 (80%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 270 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 211
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
||||||||| || |||||||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 210 gagttcccgtacccacacgcgccgcccattgtgccggaggcgtcactgccaccgtagaaa 151
Query: 1099 gtggcgtgggcgctctgccacg 1120
|||||||| || |||||||||
Sbjct: 150 gtggcgtgtgcattctgccacg 129
>gb|CW801616.1|CW801616 WiscDsLox495F06 Arabidopsis thaliana T-DNA insertion flanking
sequences Arabidopsis thaliana genomic, DNA sequence
Length = 865
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 342 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 283
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 282 atcgtgaaccttatccc 266
>gb|CB264576.1|CB264576 53-E014659-035-002-I14-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000I142Q 5-PRIME, mRNA sequence
Length = 540
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 284 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 225
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 224 atcgtgaaccttatccc 208
>gb|AV439490.1|AV439490 AV439490 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APD02d10_f 3', mRNA
sequence
Length = 611
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 406 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 465
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 466 atcgtgaaccttatccc 482
>gb|AV517928.1|AV517928 AV517928 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APD02h12F 3', mRNA
sequence
Length = 616
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 442 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 501
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 502 atcgtgaaccttatccc 518
>emb|AX651780.1| Sequence 631 from Patent WO03000898
Length = 768
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 557 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 498
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 497 atcgtgaaccttatccc 481
>dbj|AB025615.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K5K13
Length = 83544
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 61151 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 61210
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 61211 atcgtgaaccttatccc 61227
>gb|U30478.1|ATU30478 Arabidopsis thaliana expansin At-EXPA5 (At-EXPA5) mRNA, complete
cds
Length = 1062
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 657 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 598
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 597 atcgtgaaccttatccc 581
>emb|CQ805978.1| Sequence 2389 from Patent WO2004035798
Length = 768
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 557 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 498
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 497 atcgtgaaccttatccc 481
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 10935265 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 10935324
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 10935325 atcgtgaaccttatccc 10935341
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 664 ccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaacctg 723
||||||||||| || | |||||||| ||||||||| ||| |||||||| ||||||||
Sbjct: 20538748 ccggccacgttcgtaatcagcaccaagttgaagtaacggtgaccgttgatcgtgaacctt 20538807
Query: 724 atccc 728
|||||
Sbjct: 20538808 atccc 20538812
Score = 42.1 bits (21), Expect = 0.23
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 997 gtgctcagcgccgccgtgttggtgccgta 1025
|||||||||||||||||||| || |||||
Sbjct: 20539204 gtgctcagcgccgccgtgtttgttccgta 20539232
>ref|NM_113824.2| Arabidopsis thaliana ATEXPA5 (ARABIDOPSIS THALIANA EXPANSIN A5)
AT3G29030 (ATEXPA5) mRNA, complete cds
Length = 1288
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 847 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 788
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 787 atcgtgaaccttatccc 771
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| ||||||||||||
Sbjct: 11012986 acgtccccggctccacccacgtttgtgaccaacaccaagttaaagtatgagtggccgttg 11013045
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 11013046 atcgtgaaccttatccc 11013062
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 664 ccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaacctg 723
||||||||||| || | |||||||| ||||||||| ||| |||||||| ||||||||
Sbjct: 20586275 ccggccacgttcgtaatcagcaccaagttgaagtaacggtgaccgttgatcgtgaacctt 20586334
Query: 724 atccc 728
|||||
Sbjct: 20586335 atccc 20586339
Score = 42.1 bits (21), Expect = 0.23
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 997 gtgctcagcgccgccgtgttggtgccgta 1025
|||||||||||||||||||| || |||||
Sbjct: 20586731 gtgctcagcgccgccgtgtttgttccgta 20586759
>gb|AY088179.1| Arabidopsis thaliana clone 42551 mRNA, complete sequence
Length = 1203
Score = 61.9 bits (31), Expect = 3e-007
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgta 1037
|||| ||||||| || |||||||| || ||||||||||| |||||||| || |||||
Sbjct: 329 gccgccgttgaatagagccgtgcttagagccgccgtgttagtgccgtatccttgactgta 270
Query: 1038 catgttcccgtagccgcacgcgccgcccatcgtgccaga 1076
| ||| ||||| || |||||||||||||| ||||||||
Sbjct: 269 taagtttccgtaaccacacgcgccgcccatggtgccaga 231
Score = 44.1 bits (22), Expect = 0.059
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 658 ccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtg 717
||||||||||| |||||||| | || || ||||||||||| || || |||||||| |||
Sbjct: 649 ccggcgccggcgacgttggttataagtacgaggttgaagtatgaatgaccgttgatcgtg 590
Query: 718 aa 719
||
Sbjct: 589 aa 588
>ref|NM_125015.1| Arabidopsis thaliana ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14)
AT5G56320 (ATEXPA14) mRNA, complete cds
Length = 1203
Score = 61.9 bits (31), Expect = 3e-007
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgta 1037
|||| ||||||| || |||||||| || ||||||||||| |||||||| || |||||
Sbjct: 329 gccgccgttgaatagagccgtgcttagagccgccgtgttagtgccgtatccttgactgta 270
Query: 1038 catgttcccgtagccgcacgcgccgcccatcgtgccaga 1076
| ||| ||||| || |||||||||||||| ||||||||
Sbjct: 269 taagtttccgtaaccacacgcgccgcccatggtgccaga 231
Score = 44.1 bits (22), Expect = 0.059
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 658 ccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtg 717
||||||||||| |||||||| | || || ||||||||||| || || |||||||| |||
Sbjct: 649 ccggcgccggcgacgttggttataagtacgaggttgaagtatgaatgaccgttgatcgtg 590
Query: 718 aa 719
||
Sbjct: 589 aa 588
>gb|BP808070.1|BP808070 BP808070 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-16-F04 5',
mRNA sequence
Length = 399
Score = 60.0 bits (30), Expect = 1e-006
Identities = 76/90 (84%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 1032 gctgtacatgttcccgtagccgcacgcgccgcccatcgt-gccagacgcgtcgccgccgc 1090
|||||||| ||||||||| || |||||||||||||| || ||| || ||||| | ||| |
Sbjct: 234 gctgtacaagttcccgtacccacacgcgccgcccattgtggccggaggcgtcactgccac 175
Query: 1091 cgtagaacgtggcgtgggcgctctgccacg 1120
||||||| |||||||| || |||||||||
Sbjct: 174 cgtagaaagtggcgtgtgcattctgccacg 145
>gb|AY064035.1| Arabidopsis thaliana putative expansin At-EXP2 protein (At5g05290)
mRNA, complete cds
Length = 994
Score = 58.0 bits (29), Expect = 4e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 760 gcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatg 819
||||| || ||||| || || |||||||| ||||||||||||||||| |||| ||||| |
Sbjct: 510 gcgacaggaacgatcccagctcggtactgagcgatctggaggaaggcaggctcggccaag 451
Query: 820 tcgaagtgc 828
|| ||||||
Sbjct: 450 tcaaagtgc 442
>emb|BX823143.1|CNS0A752 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB93ZA05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1782
Score = 58.0 bits (29), Expect = 4e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 652 acgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttg 711
||||||||||| || ||||||| || |||| ||||| ||| ||||| |||||||||| |
Sbjct: 1406 acgtccccggctccacccacgtttgtaaccaacaccaagttaaagtatgagtggccgtgg 1347
Query: 712 atggtgaacctgatccc 728
|| |||||||| |||||
Sbjct: 1346 atcgtgaaccttatccc 1330
>emb|BX822037.1|CNS0A93W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL93ZF12 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 996
Score = 58.0 bits (29), Expect = 4e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 1032 gctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgcc 1091
|||||||| ||||||||| | |||||||||||||| ||||| || |||| | ||| ||
Sbjct: 220 gctgtacaagttcccgtacctacacgcgccgcccattgtgccggaggcgtaactgccacc 161
Query: 1092 gtagaacgtggcgtgggcgctctgccacg 1120
|||||| |||||||| || |||||||||
Sbjct: 160 gtagaaagtggcgtgtgcattctgccacg 132
>dbj|AB010692.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18I23
Length = 72691
Score = 58.0 bits (29), Expect = 4e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 760 gcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatg 819
||||| || ||||| || || |||||||| ||||||||||||||||| |||| ||||| |
Sbjct: 20604 gcgacaggaacgatcccagctcggtactgagcgatctggaggaaggcaggctcggccaag 20545
Query: 820 tcgaagtgc 828
|| ||||||
Sbjct: 20544 tcaaagtgc 20536
>gb|U30481.3|ATU30481 Arabidopsis thaliana expansin At-EXPA2 (At-EXPA2) mRNA, complete
cds
Length = 926
Score = 58.0 bits (29), Expect = 4e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 760 gcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatg 819
||||| || ||||| || || |||||||| ||||||||||||||||| |||| ||||| |
Sbjct: 474 gcgacaggaacgatcccagctcggtactgagcgatctggaggaaggcaggctcggccaag 415
Query: 820 tcgaagtgc 828
|| ||||||
Sbjct: 414 tcaaagtgc 406
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 58.0 bits (29), Expect = 4e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 760 gcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatg 819
||||| || ||||| || || |||||||| ||||||||||||||||| |||| ||||| |
Sbjct: 1488336 gcgacaggaacgatcccagctcggtactgagcgatctggaggaaggcaggctcggccaag 1488277
Query: 820 tcgaagtgc 828
|| ||||||
Sbjct: 1488276 tcaaagtgc 1488268
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgta 1025
|||| ||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 20337469 gccgccgttgaatagagccgtgcttagagccgccgtgttagtgccgta 20337422
Score = 44.1 bits (22), Expect = 0.059
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 658 ccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtg 717
||||||||||| |||||||| | || || ||||||||||| || || |||||||| |||
Sbjct: 20337868 ccggcgccggcgacgttggttataagtacgaggttgaagtatgaatgaccgttgatcgtg 20337809
Query: 718 aa 719
||
Sbjct: 20337808 aa 20337807
>ref|NM_120611.2| Arabidopsis thaliana ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)
AT5G05290 (ATEXPA2) mRNA, complete cds
Length = 978
Score = 58.0 bits (29), Expect = 4e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 760 gcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatg 819
||||| || ||||| || || |||||||| ||||||||||||||||| |||| ||||| |
Sbjct: 510 gcgacaggaacgatcccagctcggtactgagcgatctggaggaaggcaggctcggccaag 451
Query: 820 tcgaagtgc 828
|| ||||||
Sbjct: 450 tcaaagtgc 442
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 58.0 bits (29), Expect = 4e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 760 gcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatg 819
||||| || ||||| || || |||||||| ||||||||||||||||| |||| ||||| |
Sbjct: 1569299 gcgacaggaacgatcccagctcggtactgagcgatctggaggaaggcaggctcggccaag 1569240
Query: 820 tcgaagtgc 828
|| ||||||
Sbjct: 1569239 tcaaagtgc 1569231
Score = 48.1 bits (24), Expect = 0.004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgta 1025
|||| ||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 22826510 gccgccgttgaatagagccgtgcttagagccgccgtgttagtgccgta 22826463
Score = 44.1 bits (22), Expect = 0.059
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 658 ccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtg 717
||||||||||| |||||||| | || || ||||||||||| || || |||||||| |||
Sbjct: 22826909 ccggcgccggcgacgttggttataagtacgaggttgaagtatgaatgaccgttgatcgtg 22826850
Query: 718 aa 719
||
Sbjct: 22826849 aa 22826848
>gb|AV824249.1|AV824249 AV824249 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-16-I21 5', mRNA
sequence
Length = 554
Score = 56.0 bits (28), Expect = 2e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 373 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 314
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 313 taaccncaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 255
>gb|CK119406.1|CK119406 212o22.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O22212
5-PRIME, mRNA sequence
Length = 699
Score = 56.0 bits (28), Expect = 2e-005
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| |||||||| || ||||||| |||||||||||| ||||| || |||||||
Sbjct: 112 ccgttgttgaacaaagcagtgctcaacgccgccgtgttcacaccgtatccttggctgtac 53
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtc 1082
| ||||||||| || |||||||||||||| ||||| || |||||
Sbjct: 52 aagttcccgtacccacacgcgccgcccattgtgccggaggcgtc 9
>gb|BE529402.1|BE529402 M74M20STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600038679R1 5', mRNA sequence
Length = 246
Score = 54.0 bits (27), Expect = 6e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgta 1025
|||| ||||||||| || ||||||| ||||||||||||||| |||||
Sbjct: 138 ccgttgttgaacagagcagtgctcaacgccgccgtgttggtcccgta 92
>gb|AV826552.1|AV826552 AV826552 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-17-L22 5', mRNA
sequence
Length = 608
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 369 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 310
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 309 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 251
>gb|CB258037.1|CB258037 74-E011082-014-003-D19-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771D193Q 5-PRIME, mRNA sequence
Length = 533
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 344 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 285
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 284 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 226
>gb|BX840109.1|BX840109 BX840109 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH40ZF08 5PRIM, mRNA
sequence
Length = 975
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 348 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 289
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 288 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 230
>gb|AV551490.1|AV551490 AV551490 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ127e02R 5', mRNA sequence
Length = 405
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 349 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 290
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 289 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 231
>gb|CF774488.1|CF774488 AG_FSL_37G10 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 37G10, mRNA sequence
Length = 411
Score = 54.0 bits (27), Expect = 6e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgta 1025
|||| ||||||||| || ||||||| ||||||||||||||| |||||
Sbjct: 195 ccgttgttgaacagagcagtgctcaacgccgccgtgttggtcccgta 241
>gb|CB253351.1|CB253351 03-E010742-019-001-F13-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768F131Q 5-PRIME, mRNA sequence
Length = 601
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 369 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 310
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 309 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 251
>gb|CB254578.1|CB254578 65-E018437-019-009-A17-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A179Q 5-PRIME, mRNA sequence
Length = 691
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 357 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 298
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 297 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 239
>gb|BP796889.1|BP796889 BP796889 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-01-D23 5',
mRNA sequence
Length = 382
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 367 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 308
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 307 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 249
>gb|BP797885.1|BP797885 BP797885 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-05-D24 5',
mRNA sequence
Length = 384
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 367 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 308
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 307 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 249
>gb|BP820825.1|BP820825 BP820825 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-55-N06 5',
mRNA sequence
Length = 384
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 370 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 311
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 310 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 252
>gb|AF410277.1|AF410277 Arabidopsis thaliana At2g39700/F17A14.7 mRNA, complete cds
Length = 1306
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 371 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 312
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 311 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 253
>gb|AY062683.1| Arabidopsis thaliana putative expansin (At2g39700; F17A14.7) mRNA,
complete cds
Length = 1318
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 368 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 309
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 308 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 250
>gb|AY093338.1| Arabidopsis thaliana putative expansin (At2g39700) mRNA, complete cds
Length = 871
Score = 54.0 bits (27), Expect = 6e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 988 aacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccg 1047
||||||||||| |||| || ||||||||||| |||||||| |||||| | ||| |||
Sbjct: 221 aacagcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccg 162
Query: 1048 tagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
|| || || || || ||||| ||||| || ||||||| ||| ||||| || ||||||||
Sbjct: 161 taaccacaagctcctcccattgtgccggaggcgtcgctgccaccgtaaaaagtggcgtg 103
>gb|AY072167.1| Arabidopsis thaliana putative expansin protein (At2g03090) mRNA,
complete cds
Length = 1384
Score = 54.0 bits (27), Expect = 6e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgta 1025
|||| ||||||||| || ||||||| ||||||||||||||| |||||
Sbjct: 316 ccgttgttgaacagagcagtgctcaacgccgccgtgttggtcccgta 270
Score = 46.1 bits (23), Expect = 0.015
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 673 ttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaa 719
|||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 622 ttggtcaccaagacaaggttgaagtaagagtgaccgttgattgtgaa 576
>gb|AY117342.1| Arabidopsis thaliana putative expansin protein (At2g03090) mRNA,
complete cds
Length = 793
Score = 54.0 bits (27), Expect = 6e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgta 1025
|||| ||||||||| || ||||||| ||||||||||||||| |||||
Sbjct: 227 ccgttgttgaacagagcagtgctcaacgccgccgtgttggtcccgta 181
Score = 46.1 bits (23), Expect = 0.015
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 673 ttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaa 719
|||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct: 533 ttggtcaccaagacaaggttgaagtaagagtgaccgttgattgtgaa 487
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 432,223
Number of Sequences: 1013581
Number of extensions: 432223
Number of successful extensions: 32257
Number of sequences better than 0.5: 142
Number of HSP's better than 0.5 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29720
Number of HSP's gapped (non-prelim): 2522
length of query: 1271
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1251
effective length of database: 888,669,252
effective search space: 1111725234252
effective search space used: 1111725234252
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)