BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738931.2.11
(609 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA712836.1|AA712836 32395 Lambda-PRL2 Arabidopsis thalia... 133 4e-029
gb|AV783588.1|AV783588 AV783588 RAFL5 Arabidopsis thaliana ... 133 4e-029
gb|AV822757.1|AV822757 AV822757 RAFL5 Arabidopsis thaliana ... 133 4e-029
gb|AV824595.1|AV824595 AV824595 RAFL6 Arabidopsis thaliana ... 133 4e-029
gb|BP803849.1|BP803849 BP803849 RAFL14 Arabidopsis thaliana... 133 4e-029
gb|BP820602.1|BP820602 BP820602 RAFL19 Arabidopsis thaliana... 133 4e-029
gb|BP828179.1|BP828179 BP828179 RAFL19 Arabidopsis thaliana... 133 4e-029
gb|BP842450.1|BP842450 BP842450 RAFL21 Arabidopsis thaliana... 133 4e-029
gb|BP865718.1|BP865718 BP865718 RAFL21 Arabidopsis thaliana... 133 4e-029
gb|AY052313.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA... 133 4e-029
gb|AY054616.1| Arabidopsis thaliana 60S ribosomal protein L... 133 4e-029
gb|AY061893.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA... 133 4e-029
gb|AY072459.1| Arabidopsis thaliana 60S ribosomal protein L... 133 4e-029
emb|BX821878.1|CNS0A8AF Arabidopsis thaliana Full-length cD... 133 4e-029
ref|NM_127532.2| Arabidopsis thaliana structural constituen... 133 4e-029
gb|BP803774.1|BP803774 BP803774 RAFL14 Arabidopsis thaliana... 125 9e-027
gb|BP804077.1|BP804077 BP804077 RAFL14 Arabidopsis thaliana... 125 9e-027
gb|BP825438.1|BP825438 BP825438 RAFL19 Arabidopsis thaliana... 125 9e-027
gb|BP855065.1|BP855065 BP855065 RAFL21 Arabidopsis thaliana... 125 9e-027
gb|BP856341.1|BP856341 BP856341 RAFL21 Arabidopsis thaliana... 125 9e-027
gb|BP858909.1|BP858909 BP858909 RAFL21 Arabidopsis thaliana... 125 9e-027
gb|BP845867.1|BP845867 BP845867 RAFL21 Arabidopsis thaliana... 117 2e-024
gb|BP848402.1|BP848402 BP848402 RAFL21 Arabidopsis thaliana... 117 2e-024
gb|BP861391.1|BP861391 BP861391 RAFL21 Arabidopsis thaliana... 117 2e-024
gb|AA712793.1|AA712793 32352 Lambda-PRL2 Arabidopsis thalia... 113 4e-023
gb|BP853859.1|BP853859 BP853859 RAFL21 Arabidopsis thaliana... 111 1e-022
gb|BP833535.1|BP833535 BP833535 RAFL19 Arabidopsis thaliana... 109 6e-022
gb|BP849012.1|BP849012 BP849012 RAFL21 Arabidopsis thaliana... 109 6e-022
gb|AY085397.1| Arabidopsis thaliana clone 14992 mRNA, compl... 107 2e-021
gb|BP803340.1|BP803340 BP803340 RAFL14 Arabidopsis thaliana... 103 3e-020
gb|AA712129.1|AA712129 31857 Lambda-PRL2 Arabidopsis thalia... 100 5e-019
gb|AF162852.1|AF162852 AF162852 Arabidopsis thaliana germin... 100 5e-019
gb|AI999687.1|AI999687 701557041 A. thaliana, Columbia Col-... 100 5e-019
gb|BE038115.1|BE038115 AA09A10 AA Arabidopsis thaliana cDNA... 100 5e-019
gb|AV781856.1|AV781856 AV781856 RAFL4 Arabidopsis thaliana ... 100 5e-019
gb|AV784252.1|AV784252 AV784252 RAFL5 Arabidopsis thaliana ... 100 5e-019
gb|AV823312.1|AV823312 AV823312 RAFL5 Arabidopsis thaliana ... 100 5e-019
gb|AV828556.1|AV828556 AV828556 RAFL9 Arabidopsis thaliana ... 100 5e-019
gb|CB258758.1|CB258758 16-E011797-014-004-O03-T7R MPIZ-ADIS... 100 5e-019
gb|CB258760.1|CB258760 16-E011801-014-004-O03-T7R MPIZ-ADIS... 100 5e-019
gb|CB264052.1|CB264052 93-E020824-035-001-A01S-T7R MPIZ-ADI... 100 5e-019
gb|CB265195.1|CB265195 01-E013840-035-001-A01-T7R MPIZ-ADIS... 100 5e-019
gb|BP560567.2|BP560567 BP560567 RAFL4 Arabidopsis thaliana ... 100 5e-019
gb|BP816300.1|BP816300 BP816300 RAFL19 Arabidopsis thaliana... 100 5e-019
gb|BP819737.1|BP819737 BP819737 RAFL19 Arabidopsis thaliana... 100 5e-019
gb|BP828143.1|BP828143 BP828143 RAFL19 Arabidopsis thaliana... 100 5e-019
gb|AY050393.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA... 100 5e-019
gb|AY124821.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA... 100 5e-019
ref|NM_125054.1| Arabidopsis thaliana structural constituen... 100 5e-019
gb|BP803061.1|BP803061 BP803061 RAFL14 Arabidopsis thaliana... 98 2e-018
gb|BP566406.1|BP566406 BP566406 RAFL14 Arabidopsis thaliana... 96 8e-018
gb|AA394387.1|AA394387 25970 Lambda-PRL2 Arabidopsis thalia... 94 3e-017
gb|AA712833.1|AA712833 32392 Lambda-PRL2 Arabidopsis thalia... 94 3e-017
gb|BP587543.1|BP587543 BP587543 RAFL15 Arabidopsis thaliana... 94 3e-017
emb|BX827089.1|CNS0A3AD Arabidopsis thaliana Full-length cD... 94 3e-017
gb|H77007.1|H77007 17438 Lambda-PRL2 Arabidopsis thaliana c... 90 5e-016
gb|R30337.1|R30337 12942 Lambda-PRL2 Arabidopsis thaliana c... 90 5e-016
gb|BE526625.1|BE526625 M66E03STM Arabidopsis developing see... 90 5e-016
emb|AX506072.1| Sequence 767 from Patent WO0216655 90 5e-016
gb|BT005841.1| Arabidopsis thaliana At4g26230 gene, complet... 90 5e-016
gb|AY085228.1| Arabidopsis thaliana clone 14013 mRNA, compl... 90 5e-016
emb|BX829225.1|CNS0A2K3 Arabidopsis thaliana Full-length cD... 90 5e-016
ref|NM_118756.3| Arabidopsis thaliana structural constituen... 90 5e-016
gb|AA713212.1|AA713212 32772 Lambda-PRL2 Arabidopsis thalia... 84 3e-014
gb|B27997.1|B27997 T25A7TRB TAMU Arabidopsis thaliana genom... 82 1e-013
gb|B67505.1|B67505 T25A7TR.1 TAMU Arabidopsis thaliana geno... 82 1e-013
gb|AI994297.1|AI994297 701502419 A. thaliana, Ohio State cl... 82 1e-013
gb|BP839412.1|BP839412 BP839412 RAFL19 Arabidopsis thaliana... 82 1e-013
gb|BP859192.1|BP859192 BP859192 RAFL21 Arabidopsis thaliana... 82 1e-013
gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F2... 82 1e-013
emb|AJ837508.1| Arabidopsis thaliana T-DNA flanking sequenc... 82 1e-013
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 82 1e-013
gb|AV789868.1|AV789868 AV789868 RAFL6 Arabidopsis thaliana ... 76 8e-012
gb|BP630409.1|BP630409 BP630409 RAFL17 Arabidopsis thaliana... 76 8e-012
gb|CC057233.1|CC057233 SALK_114266.36.25.x Arabidopsis thal... 74 3e-011
emb|CR934996.1| Arabidopsis thaliana T-DNA flanking sequenc... 74 3e-011
gb|BP576329.1|BP576329 BP576329 RAFL14 Arabidopsis thaliana... 74 3e-011
dbj|AB013392.1| Arabidopsis thaliana genomic DNA, chromosom... 74 3e-011
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 74 3e-011
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 74 3e-011
gb|BP843332.1|BP843332 BP843332 RAFL21 Arabidopsis thaliana... 70 5e-010
gb|CL476153.1|CL476153 SAIL_24_F05.v1 SAIL Collection Arabi... 66 8e-009
gb|BP567792.1|BP567792 BP567792 RAFL14 Arabidopsis thaliana... 66 8e-009
gb|BP577765.1|BP577765 BP577765 RAFL14 Arabidopsis thaliana... 66 8e-009
gb|BP587821.1|BP587821 BP587821 RAFL15 Arabidopsis thaliana... 66 8e-009
gb|BP642434.1|BP642434 BP642434 RAFL19 Arabidopsis thaliana... 66 8e-009
gb|BP641329.1|BP641329 BP641329 RAFL19 Arabidopsis thaliana... 64 3e-008
gb|BP861409.1|BP861409 BP861409 RAFL21 Arabidopsis thaliana... 64 3e-008
emb|CR934995.1| Arabidopsis thaliana T-DNA flanking sequenc... 62 1e-007
gb|T20565.1|T20565 2573 Lambda-PRL2 Arabidopsis thaliana cD... 62 1e-007
gb|BP565757.1|BP565757 BP565757 RAFL14 Arabidopsis thaliana... 62 1e-007
gb|BP570485.1|BP570485 BP570485 RAFL14 Arabidopsis thaliana... 62 1e-007
gb|BP580505.1|BP580505 BP580505 RAFL14 Arabidopsis thaliana... 62 1e-007
gb|BP626959.1|BP626959 BP626959 RAFL17 Arabidopsis thaliana... 62 1e-007
gb|BP661552.1|BP661552 BP661552 RAFL21 Arabidopsis thaliana... 62 1e-007
gb|BP833745.1|BP833745 BP833745 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|BP840308.1|BP840308 BP840308 RAFL19 Arabidopsis thaliana... 62 1e-007
gb|BH619058.1|BH619058 SALK_040183 Arabidopsis thaliana TDN... 60 5e-007
gb|BP624283.1|BP624283 BP624283 RAFL17 Arabidopsis thaliana... 60 5e-007
gb|BP635854.1|BP635854 BP635854 RAFL18 Arabidopsis thaliana... 60 5e-007
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 60 5e-007
emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome... 60 5e-007
emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosom... 60 5e-007
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 60 5e-007
gb|BH905643.1|BH905643 SALK_107543.55.00.x Arabidopsis thal... 58 2e-006
gb|BZ379341.1|BZ379341 SALK_113204.32.60.x Arabidopsis thal... 58 2e-006
emb|BX536049.1| Arabidopsis thaliana T-DNA flanking sequenc... 58 2e-006
gb|BP630592.1|BP630592 BP630592 RAFL17 Arabidopsis thaliana... 58 2e-006
emb|AJ520663.1|ATH520663 Arabidopsis thaliana T-DNA flankin... 58 2e-006
emb|AJ523864.1|ATH523864 Arabidopsis thaliana T-DNA flankin... 58 2e-006
gb|Z26807.1|Z26807 ATTS1840 AC16H Arabidopsis thaliana cDNA... 56 7e-006
gb|AU236156.1|AU236156 AU236156 RAFL14 Arabidopsis thaliana... 56 7e-006
gb|AV536563.1|AV536563 AV536563 Arabidopsis thaliana liquid... 56 7e-006
gb|BP584789.1|BP584789 BP584789 RAFL14 Arabidopsis thaliana... 56 7e-006
gb|BP623963.1|BP623963 BP623963 RAFL17 Arabidopsis thaliana... 56 7e-006
gb|BP661751.1|BP661751 BP661751 RAFL21 Arabidopsis thaliana... 56 7e-006
gb|BP663261.1|BP663261 BP663261 RAFL21 Arabidopsis thaliana... 56 7e-006
gb|BP781832.1|BP781832 BP781832 RAFL7 Arabidopsis thaliana ... 56 7e-006
gb|BP791265.1|BP791265 BP791265 RAFL7 Arabidopsis thaliana ... 56 7e-006
gb|BP858264.1|BP858264 BP858264 RAFL21 Arabidopsis thaliana... 56 7e-006
gb|CF652392.1|CF652392 52-L020577-066-004-G13-SP6P MPIZ-ADI... 54 3e-005
gb|BP633575.1|BP633575 BP633575 RAFL17 Arabidopsis thaliana... 54 3e-005
gb|BP648420.1|BP648420 BP648420 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BH610802.1|BH610802 SALK_018067 Arabidopsis thaliana TDN... 52 1e-004
gb|AV786876.1|AV786876 AV786876 RAFL6 Arabidopsis thaliana ... 52 1e-004
gb|BP638305.1|BP638305 BP638305 RAFL19 Arabidopsis thaliana... 50 4e-004
gb|BP818091.1|BP818091 BP818091 RAFL19 Arabidopsis thaliana... 50 4e-004
gb|BH850264.1|BH850264 SALK_071029.36.65.x Arabidopsis thal... 48 0.002
gb|BZ769602.1|BZ769602 SALK_142432.30.60.x Arabidopsis thal... 48 0.002
gb|BP576624.1|BP576624 BP576624 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP576676.1|BP576676 BP576676 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP658216.1|BP658216 BP658216 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP782236.1|BP782236 BP782236 RAFL7 Arabidopsis thaliana ... 48 0.002
gb|CB185484.1|CB185484 EST00017 Arabidopsis Salicylic Acid ... 46 0.007
gb|BP642779.1|BP642779 BP642779 RAFL19 Arabidopsis thaliana... 46 0.007
gb|BP838498.1|BP838498 BP838498 RAFL19 Arabidopsis thaliana... 46 0.007
gb|BH251039.1|BH251039 SALK_010898 Arabidopsis thaliana TDN... 44 0.028
gb|BP628821.1|BP628821 BP628821 RAFL17 Arabidopsis thaliana... 44 0.028
gb|BP618144.1|BP618144 BP618144 RAFL16 Arabidopsis thaliana... 42 0.11
gb|BP839030.1|BP839030 BP839030 RAFL19 Arabidopsis thaliana... 42 0.11
gb|AA042257.1|AA042257 24578 CD4-13 Arabidopsis thaliana cD... 40 0.43
gb|BP577790.1|BP577790 BP577790 RAFL14 Arabidopsis thaliana... 40 0.43
gb|BP639189.1|BP639189 BP639189 RAFL19 Arabidopsis thaliana... 40 0.43
gb|BP654887.1|BP654887 BP654887 RAFL19 Arabidopsis thaliana... 40 0.43
gb|BP660137.1|BP660137 BP660137 RAFL19 Arabidopsis thaliana... 40 0.43
>gb|AA712836.1|AA712836 32395 Lambda-PRL2 Arabidopsis thaliana cDNA clone 201E11T7, mRNA
sequence
Length = 539
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 63 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 122
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 123 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 182
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 183 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 237
>gb|AV783588.1|AV783588 AV783588 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-11-E13 3',
mRNA sequence
Length = 562
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Minus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 482 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 423
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 422 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 363
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 362 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 308
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 266 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 207
Query: 365 gcggagat 372
|| |||||
Sbjct: 206 gctgagat 199
>gb|AV822757.1|AV822757 AV822757 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-11-E13 5',
mRNA sequence
Length = 601
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 81 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 141 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 200
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 201 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 255
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 297 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 356
Query: 365 gcggagat 372
|| |||||
Sbjct: 357 gctgagat 364
>gb|AV824595.1|AV824595 AV824595 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-D05 5',
mRNA sequence
Length = 354
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 81 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 141 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 200
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 201 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 255
>gb|BP803849.1|BP803849 BP803849 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-31-F14 5',
mRNA sequence
Length = 363
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 80 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 139
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 140 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 199
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 200 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 254
Score = 44.1 bits (22), Expect = 0.028
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccg 362
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||
Sbjct: 294 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccg 351
>gb|BP820602.1|BP820602 BP820602 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-55-B08 5',
mRNA sequence
Length = 401
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 79 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 138
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 139 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 198
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 199 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 253
Score = 40.1 bits (20), Expect = 0.43
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||| ||||| || ||| |||||| |||||||||
Sbjct: 295 gcccgtaagagaaacgatgatgaagatgc-aaggaagagttcttctccctcgtcaccgtc 353
Query: 365 gcggagat 372
|| |||||
Sbjct: 354 gctgagat 361
>gb|BP828179.1|BP828179 BP828179 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-78-A15 5',
mRNA sequence
Length = 384
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 85 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 144
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 145 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 204
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 205 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 259
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 301 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 360
Query: 365 gcggagat 372
|| |||||
Sbjct: 361 gctgagat 368
>gb|BP842450.1|BP842450 BP842450 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-54-N18 5',
mRNA sequence
Length = 387
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 81 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 141 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 200
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 201 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 255
Score = 60.0 bits (30), Expect = 5e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 297 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 356
Query: 365 gcggagatcc 374
|| |||||||
Sbjct: 357 gctgagatcc 366
>gb|BP865718.1|BP865718 BP865718 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-75-D02 5',
mRNA sequence
Length = 379
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 81 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 141 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 200
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 201 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 255
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 297 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 356
Query: 365 gcggagat 372
|| |||||
Sbjct: 357 gctgagat 364
>gb|AY052313.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA, complete cds
Length = 593
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 82 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 141
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 142 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 201
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 202 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 256
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 298 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 357
Query: 365 gcggagat 372
|| |||||
Sbjct: 358 gctgagat 365
>gb|AY054616.1| Arabidopsis thaliana 60S ribosomal protein L31 (At2g19740;
F6F22.23) mRNA, complete cds
Length = 562
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 80 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 139
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 140 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 199
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 200 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 254
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 296 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 355
Query: 365 gcggagat 372
|| |||||
Sbjct: 356 gctgagat 363
>gb|AY061893.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA, complete cds
Length = 360
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 22 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 81
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 82 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 141
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 142 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 196
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 238 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 297
Query: 365 gcggagat 372
|| |||||
Sbjct: 298 gctgagat 305
>gb|AY072459.1| Arabidopsis thaliana 60S ribosomal protein L31 (At2g19740;
F6F22.23) mRNA, complete cds
Length = 425
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 22 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 81
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 82 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 141
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 142 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 196
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 238 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 297
Query: 365 gcggagat 372
|| |||||
Sbjct: 298 gctgagat 305
>emb|BX821878.1|CNS0A8AF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL81ZB02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 525
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 55 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 114
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 115 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 174
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 175 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 229
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 271 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 330
Query: 365 gcggagat 372
|| |||||
Sbjct: 331 gctgagat 338
>ref|NM_127532.2| Arabidopsis thaliana structural constituent of ribosome AT2G19740
mRNA, complete cds
Length = 593
Score = 133 bits (67), Expect = 4e-029
Identities = 148/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 82 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 141
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 142 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 201
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 202 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 256
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 298 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 357
Query: 365 gcggagat 372
|| |||||
Sbjct: 358 gctgagat 365
>gb|BP803774.1|BP803774 BP803774 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-30-P17 5',
mRNA sequence
Length = 381
Score = 125 bits (63), Expect = 9e-027
Identities = 147/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || ||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 79 aaggaagaggtcgtgaccagggagtacattatcaatctccacaggcgcctccatagctgc 138
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 139 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 198
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 199 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 253
>gb|BP804077.1|BP804077 BP804077 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-32-F20 5',
mRNA sequence
Length = 401
Score = 125 bits (63), Expect = 9e-027
Identities = 147/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 81 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 141 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 200
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
| ||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 201 aggggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 255
Score = 40.1 bits (20), Expect = 0.43
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||| ||||| || ||| |||||| |||||||||
Sbjct: 297 gcccgtaagagaaacgatgatgaagatgc-aaggaagagttcttctccctcgtcaccgtc 355
Query: 365 gcggagat 372
|| |||||
Sbjct: 356 gctgagat 363
>gb|BP825438.1|BP825438 BP825438 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-68-J11 5',
mRNA sequence
Length = 388
Score = 125 bits (63), Expect = 9e-027
Identities = 99/111 (89%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 81 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgca 199
|| |||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 141 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 191
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 297 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 356
Query: 365 gc 366
||
Sbjct: 357 gc 358
>gb|BP855065.1|BP855065 BP855065 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-25-G14 5',
mRNA sequence
Length = 376
Score = 125 bits (63), Expect = 9e-027
Identities = 147/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| || |||||| |||||
Sbjct: 82 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcacctccatagctgc 141
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 142 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 201
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 202 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 256
Score = 60.0 bits (30), Expect = 5e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 298 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 357
Query: 365 gcggagatcc 374
|| |||||||
Sbjct: 358 gctgagatcc 367
>gb|BP856341.1|BP856341 BP856341 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-29-K16 5',
mRNA sequence
Length = 369
Score = 125 bits (63), Expect = 9e-027
Identities = 147/175 (84%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || ||||||||||| || ||||| ||||||| ||||||||| |||||
Sbjct: 81 aaggaagaggtcgtgaccagggagtaaactatcaatctccacaggcgcctccatagctgc 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 141 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 200
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 201 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 255
Score = 40.1 bits (20), Expect = 0.43
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcac 360
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||
Sbjct: 297 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcac 352
>gb|BP858909.1|BP858909 BP858909 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-38-O12 5',
mRNA sequence
Length = 393
Score = 125 bits (63), Expect = 9e-027
Identities = 99/111 (89%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 85 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 144
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgca 199
|| |||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 145 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 195
Score = 56.0 bits (28), Expect = 7e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 302 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 361
Query: 365 gcggagat 372
|| |||||
Sbjct: 362 gctgagat 369
>gb|BP845867.1|BP845867 BP845867 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-95-A22 5',
mRNA sequence
Length = 406
Score = 117 bits (59), Expect = 2e-024
Identities = 146/175 (83%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||| | | ||||||| |||||
Sbjct: 100 aaggaagaggtcgtgaccagggagtacactatcaatctccaaaggggcctccatagctgc 159
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 160 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 219
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 220 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 274
Score = 40.1 bits (20), Expect = 0.43
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcac 360
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||
Sbjct: 316 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcac 371
>gb|BP848402.1|BP848402 BP848402 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-05-E04 5',
mRNA sequence
Length = 397
Score = 117 bits (59), Expect = 2e-024
Identities = 146/175 (83%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 72 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 131
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| ||||||||||||||| |||| ||||| || |||||||||||||||| | ||| ||
Sbjct: 132 accttcaagaagaaggcagccaatgccattaaagagatcaggaagtttggattgaaagca 191
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 192 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 246
Score = 58.0 bits (29), Expect = 2e-006
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 288 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 347
Query: 365 gcggagatc 373
|| ||||||
Sbjct: 348 gctgagatc 356
>gb|BP861391.1|BP861391 BP861391 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-47-H08 5',
mRNA sequence
Length = 385
Score = 117 bits (59), Expect = 2e-024
Identities = 147/175 (84%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||| | |||||
Sbjct: 85 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctc-atagctgc 143
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggcc 208
|| |||||||||||||||||||| ||||| || |||||||||||||||||| ||| ||
Sbjct: 144 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgcattgaaagca 203
Query: 209 atgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 204 atgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 258
>gb|AA712793.1|AA712793 32352 Lambda-PRL2 Arabidopsis thaliana cDNA clone 198L19T7, mRNA
sequence
Length = 410
Score = 113 bits (57), Expect = 4e-023
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||| ||||| |||||
Sbjct: 51 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgnctccatagctgc 110
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagttt 196
|| |||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 111 accttcaagaagaaggcacccaatgccattaaagagatcaggaagttt 158
>gb|BP853859.1|BP853859 BP853859 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-59-K17 5',
mRNA sequence
Length = 394
Score = 111 bits (56), Expect = 1e-022
Identities = 147/176 (83%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 82 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 141
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaag-tttgcacagaaggc 207
|| |||||||||||||||||||| ||||| || ||||||||| || |||||| ||| ||
Sbjct: 142 accttcaagaagaaggcacccaatgccattaaagagatcagggagctttgcattgaaagc 201
Query: 208 catgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 202 aatgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 257
Score = 40.1 bits (20), Expect = 0.43
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcac 360
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||
Sbjct: 299 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcac 354
>gb|BP833535.1|BP833535 BP833535 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-96-J01 5',
mRNA sequence
Length = 375
Score = 109 bits (55), Expect = 6e-022
Identities = 98/111 (88%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 81 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 140
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgca 199
|| ||||||||||||||| |||| ||||| || ||||||||||||||||||
Sbjct: 141 accttcaagaagaaggca-ccaatgccattaaagagatcaggaagtttgca 190
>gb|BP849012.1|BP849012 BP849012 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-07-I06 5',
mRNA sequence
Length = 395
Score = 109 bits (55), Expect = 6e-022
Identities = 98/111 (88%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggctgc 148
||||| ||||| || |||||||||||||| ||||| ||||||| ||||||||| |||||
Sbjct: 82 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 141
Query: 149 acattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgca 199
|| ||||||||||||||| |||| ||||| || ||||||||||||||||||
Sbjct: 142 accttcaagaagaaggca-ccaatgccattaaagagatcaggaagtttgca 191
Score = 60.0 bits (30), Expect = 5e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 305 gcccgcaagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtc 364
||||| ||||| |||||||| || ||||||||||| || ||| |||||| |||||||||
Sbjct: 297 gcccgtaagagaaacgatgatgaagatgccaaggaagagttcttctccctcgtcaccgtc 356
Query: 365 gcggagatcc 374
|| |||||||
Sbjct: 357 gctgagatcc 366
>gb|AY085397.1| Arabidopsis thaliana clone 14992 mRNA, complete sequence
Length = 600
Score = 107 bits (54), Expect = 2e-021
Identities = 147/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 92 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 151
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 152 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 211
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||||| || ||||| | |||||||| ||||||||||
Sbjct: 212 gctatggggactaaggacgttaggatagacgtgaaattgaacaagcaaatctggagca 269
>gb|BP803340.1|BP803340 BP803340 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-28-M23 5',
mRNA sequence
Length = 379
Score = 103 bits (52), Expect = 3e-020
Identities = 146/176 (82%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc-tg 147
||||| ||||| || ||||||||||| || ||||| ||||||| ||||||||| || ||
Sbjct: 79 aaggaagaggtcgtgaccagggagtaaactatcaatctccacaggcgcctccatagcctg 138
Query: 148 cacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaaggc 207
||| |||||||||||||||||||| ||||| || |||||||||||||||| | ||| ||
Sbjct: 139 caccttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgtattgaaagc 198
Query: 208 catgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
||||| || | |||||| || | ||||| || ||||||||||| || |||||||
Sbjct: 199 aatgggaacaaaggacgttagagtggatgttaaactcaacaagcagatatggagca 254
>gb|AA712129.1|AA712129 31857 Lambda-PRL2 Arabidopsis thaliana cDNA clone 180E22T7, mRNA
sequence
Length = 515
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 23 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 82
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 83 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 142
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 143 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 200
>gb|AF162852.1|AF162852 AF162852 Arabidopsis thaliana germinating seeds Arabidopsis
thaliana cDNA clone AtGER20 similar to ribosomal
protein, mRNA sequence
Length = 621
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Minus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 494 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 435
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 434 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 375
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 374 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 317
>gb|AI999687.1|AI999687 701557041 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701557041, mRNA sequence
Length = 515
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Minus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 453 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 394
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 393 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 334
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 333 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 276
>gb|BE038115.1|BE038115 AA09A10 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 732
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 71 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 130
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 131 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 190
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 191 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 248
>gb|AV781856.1|AV781856 AV781856 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-O09 3',
mRNA sequence
Length = 586
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Minus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 483 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 424
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 423 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 364
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 363 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 306
>gb|AV784252.1|AV784252 AV784252 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-17-M03 3',
mRNA sequence
Length = 571
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Minus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 485 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 426
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 425 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 366
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 365 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 308
>gb|AV823312.1|AV823312 AV823312 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-17-M03 5',
mRNA sequence
Length = 638
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 85 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 144
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 145 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 204
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 205 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 262
>gb|AV828556.1|AV828556 AV828556 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-29-L21 5',
mRNA sequence
Length = 365
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 85 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 144
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 145 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 204
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 205 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 262
>gb|CB258758.1|CB258758 16-E011797-014-004-O03-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771O034Q 5-PRIME, mRNA sequence
Length = 508
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 54 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 113
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 114 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 173
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 174 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 231
>gb|CB258760.1|CB258760 16-E011801-014-004-O03-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771O034Q 5-PRIME, mRNA sequence
Length = 424
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 54 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 113
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 114 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 173
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 174 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 231
>gb|CB264052.1|CB264052 93-E020824-035-001-A01S-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000A011Q 5-PRIME, mRNA sequence
Length = 578
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 77 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 136
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 137 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 196
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 197 gctatggggactaaggacgttagggtagacgtgaaattaaacaagcaaatctggagca 254
>gb|CB265195.1|CB265195 01-E013840-035-001-A01-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000A011Q 5-PRIME, mRNA sequence
Length = 575
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 77 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 136
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 137 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 196
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 197 gctatggggactaaggacgttagggtagacgtgaaattaaacaagcaaatctggagca 254
>gb|BP560567.2|BP560567 BP560567 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-09-O09 5',
mRNA sequence
Length = 540
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 85 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 144
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 145 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 204
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 205 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 262
>gb|BP816300.1|BP816300 BP816300 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-41-H08 5',
mRNA sequence
Length = 407
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 88 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 147
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 148 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 207
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 208 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 265
>gb|BP819737.1|BP819737 BP819737 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-52-E14 5',
mRNA sequence
Length = 389
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 87 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 146
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 147 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 206
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 207 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 264
>gb|BP828143.1|BP828143 BP828143 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-77-O13 5',
mRNA sequence
Length = 387
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 88 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 147
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 148 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 207
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 208 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 265
>gb|AY050393.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA, complete cds
Length = 569
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 86 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 145
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 146 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 205
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 206 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 263
>gb|AY124821.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA, complete cds
Length = 360
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 19 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 78
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 79 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 138
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 139 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 196
>ref|NM_125054.1| Arabidopsis thaliana structural constituent of ribosome AT5G56710
mRNA, complete cds
Length = 600
Score = 99.6 bits (50), Expect = 5e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 86 aggaaggaggaggtggtcaccagggagtacaccatcaacctccacaagcgcctccacggc 145
||||| ||||| ||| | ||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 92 aggaaagaggaagtgattaccagagagtacaccattaacctccacagacgccttcacaaa 151
Query: 146 tgcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgcacagaag 205
||||| || |||||||||||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 152 tgcacctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaa 211
Query: 206 gccatgggcaccacggacgtcaggatcgatgtgaagctcaacaagcacatctggagca 263
|| ||||| || | |||||| ||| | || ||||| | |||||||| ||||||||||
Sbjct: 212 gctatggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 269
>gb|BP803061.1|BP803061 BP803061 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-27-I08 5',
mRNA sequence
Length = 398
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/113 (87%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 89 aaggaggaggtggtcaccagggagtacaccatcaacctccacaag-cgcc-tccacggct 146
||||| ||||| || |||||||||||||| ||||| |||||| || |||| |||| |||
Sbjct: 83 aaggaagaggtcgtgaccagggagtacactatcaatctccaccaggcgccgtccatagct 142
Query: 147 gcacattcaagaagaaggcacccaacgccatcaaggagatcaggaagtttgca 199
|||| |||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 143 gcaccttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 195
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 350,621
Number of Sequences: 1013581
Number of extensions: 350621
Number of successful extensions: 26339
Number of sequences better than 0.5: 145
Number of HSP's better than 0.5 without gapping: 140
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 25367
Number of HSP's gapped (non-prelim): 958
length of query: 609
length of database: 908,940,872
effective HSP length: 20
effective length of query: 589
effective length of database: 888,669,252
effective search space: 523426189428
effective search space used: 523426189428
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)