BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131584.2.3
(687 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV533116.1|AV533116 AV533116 Arabidopsis thaliana flower... 121 2e-025
gb|CB254025.1|CB254025 80-E015391-019-006-O19-T7R MPIZ-ADIS... 121 2e-025
gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, compl... 121 2e-025
ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G6... 121 2e-025
gb|AV818857.1|AV818857 AV818857 RAFL11 Arabidopsis thaliana... 113 4e-023
gb|AV832022.1|AV832022 AV832022 RAFL11 Arabidopsis thaliana... 113 4e-023
gb|CB264605.1|CB264605 49-E014658-035-002-A13-T7R MPIZ-ADIS... 113 4e-023
gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucle... 113 4e-023
gb|AV819279.1|AV819279 AV819279 RAFL11 Arabidopsis thaliana... 111 2e-022
gb|BP613407.1|BP613407 BP613407 RAFL16 Arabidopsis thaliana... 107 3e-021
gb|BP866835.1|BP866835 BP866835 RAFL21 Arabidopsis thaliana... 100 6e-019
gb|BP581041.1|BP581041 BP581041 RAFL14 Arabidopsis thaliana... 94 4e-017
gb|BP864880.1|BP864880 BP864880 RAFL21 Arabidopsis thaliana... 92 1e-016
gb|AI999102.1|AI999102 701554462 A. thaliana, Columbia Col-... 90 6e-016
gb|AV820625.1|AV820625 AV820625 RAFL11 Arabidopsis thaliana... 86 9e-015
gb|F20137.1|F20137 ATTS6176 AC16H Arabidopsis thaliana cDNA... 84 4e-014
gb|BP864529.1|BP864529 BP864529 RAFL21 Arabidopsis thaliana... 84 4e-014
gb|BP788381.1|BP788381 BP788381 RAFL7 Arabidopsis thaliana ... 82 1e-013
gb|BP670363.1|BP670363 BP670363 RAFL21 Arabidopsis thaliana... 80 6e-013
gb|AI998209.1|AI998209 701515770 A. thaliana, Columbia Col-... 76 9e-012
gb|CK118493.1|CK118493 216o12.p1 AtM1 Arabidopsis thaliana ... 76 9e-012
gb|BP562727.2|BP562727 BP562727 RAFL14 Arabidopsis thaliana... 76 9e-012
gb|BP815339.1|BP815339 BP815339 RAFL19 Arabidopsis thaliana... 76 9e-012
gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complet... 76 9e-012
gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, compl... 76 9e-012
emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cD... 76 9e-012
ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G4... 76 9e-012
ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G4... 76 9e-012
ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G4... 76 9e-012
gb|AV535104.1|AV535104 AV535104 Arabidopsis thaliana flower... 74 4e-011
gb|BP597520.1|BP597520 BP597520 RAFL15 Arabidopsis thaliana... 74 4e-011
gb|BP636278.1|BP636278 BP636278 RAFL18 Arabidopsis thaliana... 74 4e-011
gb|BP650469.1|BP650469 BP650469 RAFL19 Arabidopsis thaliana... 74 4e-011
gb|BP831765.1|BP831765 BP831765 RAFL19 Arabidopsis thaliana... 74 4e-011
gb|BP854615.1|BP854615 BP854615 RAFL21 Arabidopsis thaliana... 74 4e-011
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 74 4e-011
emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome ... 74 4e-011
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 74 4e-011
gb|BP858325.1|BP858325 BP858325 RAFL21 Arabidopsis thaliana... 72 1e-010
gb|BP868432.1|BP868432 BP868432 RAFL21 Arabidopsis thaliana... 72 1e-010
gb|AU226468.1|AU226468 AU226468 RAFL14 Arabidopsis thaliana... 70 5e-010
gb|H36625.1|H36625 14293 Lambda-PRL2 Arabidopsis thaliana c... 68 2e-009
gb|BP645975.1|BP645975 BP645975 RAFL19 Arabidopsis thaliana... 68 2e-009
gb|BP850718.1|BP850718 BP850718 RAFL21 Arabidopsis thaliana... 62 1e-007
gb|BP621376.1|BP621376 BP621376 RAFL16 Arabidopsis thaliana... 58 2e-006
gb|BP851888.1|BP851888 BP851888 RAFL21 Arabidopsis thaliana... 56 8e-006
gb|BP571612.1|BP571612 BP571612 RAFL14 Arabidopsis thaliana... 54 3e-005
gb|AV549536.1|AV549536 AV549536 Arabidopsis thaliana roots ... 52 1e-004
gb|BP623210.1|BP623210 BP623210 RAFL17 Arabidopsis thaliana... 52 1e-004
gb|BP821598.1|BP821598 BP821598 RAFL19 Arabidopsis thaliana... 48 0.002
gb|AV786532.1|AV786532 AV786532 RAFL6 Arabidopsis thaliana ... 44 0.031
gb|BP657733.1|BP657733 BP657733 RAFL19 Arabidopsis thaliana... 44 0.031
gb|BP669463.1|BP669463 BP669463 RAFL21 Arabidopsis thaliana... 44 0.031
gb|BP869127.1|BP869127 BP869127 RAFL21 Arabidopsis thaliana... 44 0.031
gb|AQ250786.1|AQ250786 T18J8-T7 TAMU Arabidopsis thaliana g... 42 0.12
gb|AA395596.1|AA395596 27393 Lambda-PRL2 Arabidopsis thalia... 42 0.12
gb|BP808679.1|BP808679 BP808679 RAFL16 Arabidopsis thaliana... 42 0.12
gb|BP851641.1|BP851641 BP851641 RAFL21 Arabidopsis thaliana... 42 0.12
gb|CL467882.1|CL467882 SAIL_1278_B04.v1 SAIL Collection Ara... 40 0.49
gb|AV567335.1|AV567335 AV567335 Arabidopsis thaliana green ... 40 0.49
>gb|AV533116.1|AV533116 AV533116 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB056b01F 3', mRNA sequence
Length = 591
Score = 121 bits (61), Expect = 2e-025
Identities = 202/249 (81%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 195 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 254
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 255 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 314
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 315 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 374
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 375 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 434
Query: 532 actcatcat 540
|||||||||
Sbjct: 435 actcatcat 443
>gb|CB254025.1|CB254025 80-E015391-019-006-O19-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768O196Q 5-PRIME, mRNA sequence
Length = 535
Score = 121 bits (61), Expect = 2e-025
Identities = 202/249 (81%)
Strand = Plus / Minus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 405 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 346
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 345 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 286
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 285 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 226
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 225 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 166
Query: 532 actcatcat 540
|||||||||
Sbjct: 165 actcatcat 157
>gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, complete sequence
Length = 646
Score = 121 bits (61), Expect = 2e-025
Identities = 202/249 (81%)
Strand = Plus / Minus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 450 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 391
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 390 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 331
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 330 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 271
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 270 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 211
Query: 532 actcatcat 540
|||||||||
Sbjct: 210 actcatcat 202
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds
Length = 1063
Score = 121 bits (61), Expect = 2e-025
Identities = 202/249 (81%)
Strand = Plus / Minus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 447 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 388
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 387 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 328
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 327 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 268
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 267 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 208
Query: 532 actcatcat 540
|||||||||
Sbjct: 207 actcatcat 199
>gb|AV818857.1|AV818857 AV818857 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A19 3',
mRNA sequence
Length = 412
Score = 113 bits (57), Expect = 4e-023
Identities = 202/249 (81%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 113 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 172
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 173 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 232
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 233 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagc-ctaac 291
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 292 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 351
Query: 532 actcatcat 540
|||||||||
Sbjct: 352 actcatcat 360
>gb|AV832022.1|AV832022 AV832022 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A19 5',
mRNA sequence
Length = 547
Score = 113 bits (57), Expect = 4e-023
Identities = 202/249 (81%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 427 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 368
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 367 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 308
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 307 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagc-ctaac 249
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 248 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 189
Query: 532 actcatcat 540
|||||||||
Sbjct: 188 actcatcat 180
>gb|CB264605.1|CB264605 49-E014658-035-002-A13-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000A132Q 5-PRIME, mRNA sequence
Length = 560
Score = 113 bits (57), Expect = 4e-023
Identities = 201/249 (80%)
Strand = Plus / Minus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 413 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 354
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 353 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 294
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 293 agtccacatttctatgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 234
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 233 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 174
Query: 532 actcatcat 540
|||||||||
Sbjct: 173 actcatcat 165
>gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucleoprotein-like protein
(F26K9.270) mRNA, complete cds
Length = 541
Score = 113 bits (57), Expect = 4e-023
Identities = 202/249 (81%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 429 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 370
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 369 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 310
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 309 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagc-ctaac 251
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 250 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 191
Query: 532 actcatcat 540
|||||||||
Sbjct: 190 actcatcat 182
>gb|AV819279.1|AV819279 AV819279 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-03-H06 3',
mRNA sequence
Length = 435
Score = 111 bits (56), Expect = 2e-022
Identities = 197/244 (80%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 192 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 251
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 252 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 311
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 312 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 371
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaac 531
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 372 tcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaac 431
Query: 532 actc 535
||||
Sbjct: 432 actc 435
>gb|BP613407.1|BP613407 BP613407 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-93-A15 3',
mRNA sequence
Length = 514
Score = 107 bits (54), Expect = 3e-021
Identities = 202/250 (80%), Gaps = 1/250 (0%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 192 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 251
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 252 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 311
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 312 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 371
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgat-gagaacctgggtgttgttcttaa 530
|||||||| || ||| ||||||| ||||||||||| | ||||| ||||| |||||||
Sbjct: 372 tcggccaaggagtttcctgttgttacggcaattgatcaaccacctgagtgttattcttaa 431
Query: 531 cactcatcat 540
||||||||||
Sbjct: 432 cactcatcat 441
>gb|BP866835.1|BP866835 BP866835 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-79-B01 5',
mRNA sequence
Length = 381
Score = 99.6 bits (50), Expect = 6e-019
Identities = 167/206 (81%)
Strand = Plus / Minus
Query: 335 aggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttg 394
|||||||||||||||||||||| ||| |||| ||||| ||||| ||||| || || ||
Sbjct: 375 aggaacatcttgctgatgaatcgatctctgttaacaggaagagctttcttctttcctttt 316
Query: 395 ccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtgg 454
|| || || || ||||| |||||||| || | || || || || |||||||| |||||
Sbjct: 315 ccggttttcggaacctcagtccacatttctctgacattttcaagaaccatgttgcagtgc 256
Query: 455 cgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacc 514
| |||||||| | ||| |||||||| || ||| ||||||| ||||||||||| | |||
Sbjct: 255 ctgtcaaaagccctaactcggccaaggagtttcctgttgttacggcaattgatcaacacc 196
Query: 515 tgggtgttgttcttaacactcatcat 540
|| ||||| |||||||||||||||||
Sbjct: 195 tgagtgttattcttaacactcatcat 170
>gb|BP581041.1|BP581041 BP581041 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-30-D07 3',
mRNA sequence
Length = 467
Score = 93.7 bits (47), Expect = 4e-017
Identities = 202/251 (80%), Gaps = 2/251 (0%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgag-tcgcccctgaggaacatcttgctga 350
||||||||||||||| || ||||| ||||| ||| || || | ||||||||||||||||
Sbjct: 195 tcacttggggttcctgaggacgataatgactgagctctccacgcaggaacatcttgctga 254
Query: 351 tgaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacct 410
|||||| ||| |||| ||||| ||||| ||||| || || || || || || || ||||
Sbjct: 255 tgaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacct 314
Query: 411 ctgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacg-a 469
| |||||||| || | || || || || |||||||| ||||| | |||||||| | |
Sbjct: 315 cagtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccccta 374
Query: 470 acccggccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttctta 529
|| |||||||| || ||| ||||||| ||||||||||| | ||||| ||||| ||||||
Sbjct: 375 actcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattctta 434
Query: 530 acactcatcat 540
|||||||||||
Sbjct: 435 acactcatcat 445
>gb|BP864880.1|BP864880 BP864880 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-72-C14 5',
mRNA sequence
Length = 390
Score = 91.7 bits (46), Expect = 1e-016
Identities = 166/206 (80%)
Strand = Plus / Minus
Query: 335 aggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttg 394
|||||||||||||||||||||| ||| |||| ||||| ||||| |||| || || ||
Sbjct: 379 aggaacatcttgctgatgaatcgatctctgttaacaggaagagctttctcctttcctttt 320
Query: 395 ccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtgg 454
|| || || || ||||| |||||||| || | || || || || |||||||| |||||
Sbjct: 319 ccggttttcggaacctcagtccacatttctctgacattttcaagaaccatgttgcagtgc 260
Query: 455 cgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacc 514
| |||||||| | ||| |||||||| || ||| ||||||| ||||||||||| | |||
Sbjct: 259 ctgtcaaaagccctaactcggccaaggagtttcctgttgttacggcaattgatcaacacc 200
Query: 515 tgggtgttgttcttaacactcatcat 540
|| ||||| |||||||||||||||||
Sbjct: 199 tgagtgttattcttaacactcatcat 174
>gb|AI999102.1|AI999102 701554462 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701554462, mRNA sequence
Length = 379
Score = 89.7 bits (45), Expect = 6e-016
Identities = 171/213 (80%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 167 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 226
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 227 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 286
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 287 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 346
Query: 472 ccggccaagcagcttcttgttgttgcggcaatt 504
|||||||| || ||| ||||||| ||||||||
Sbjct: 347 tcggccaaggagtttcctgttgttacggcaatt 379
>gb|AV820625.1|AV820625 AV820625 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-H04 3',
mRNA sequence
Length = 404
Score = 85.7 bits (43), Expect = 9e-015
Identities = 202/251 (80%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 113 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 172
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 173 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 232
Query: 412 tg-tccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaa 470
| ||||||| || | || || || || |||||||| ||||| | |||||||| | ||
Sbjct: 233 agctccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagc-ctaa 291
Query: 471 cccggccaagcagcttcttgttgttgcggcaattgatgagaacctg-ggtgttgttctta 529
| |||||||| || ||| ||| ||| ||||||||||| | ||||| |||||| ||||||
Sbjct: 292 ctcggccaaggagtttcgtgtcgttacggcaattgatcaacacctgaggtgttattctta 351
Query: 530 acactcatcat 540
|||||||||||
Sbjct: 352 acactcatcat 362
>gb|F20137.1|F20137 ATTS6176 AC16H Arabidopsis thaliana cDNA clone TAP0004 similar to
Homo sapiens., mRNA sequence
Length = 574
Score = 83.8 bits (42), Expect = 4e-014
Identities = 219/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 408 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 349
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 348 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 289
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || ||||||||
Sbjct: 288 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcggccaaga 229
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 228 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 169
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 168 agaacagagagtggcccggtgttgaattcctcttcctc 131
>gb|BP864529.1|BP864529 BP864529 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-I12 5',
mRNA sequence
Length = 390
Score = 83.8 bits (42), Expect = 4e-014
Identities = 166/206 (80%), Gaps = 1/206 (0%)
Strand = Plus / Minus
Query: 335 aggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttg 394
|||||||||||||||||||||| ||| |||| ||||| ||||| ||||| || || ||
Sbjct: 373 aggaacatcttgctgatgaatcgatctctgttaacaggaagagctttcttctttcctttt 314
Query: 395 ccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtgg 454
|| || || || ||||| |||||||| || | || || || || |||||||| |||||
Sbjct: 313 ccggttttcggaacctcagtccacatttctctgacattttcaagaaccatgttgcagtgc 254
Query: 455 cgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacc 514
| ||||| || | ||| |||||||| || ||| ||||||| ||||||||||| | |||
Sbjct: 253 ctgtcaaa-gccctaactcggccaaggagtttcctgttgttacggcaattgatcaacacc 195
Query: 515 tgggtgttgttcttaacactcatcat 540
|| ||||| |||||||||||||||||
Sbjct: 194 tgagtgttattcttaacactcatcat 169
>gb|BP788381.1|BP788381 BP788381 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-33-J03 3',
mRNA sequence
Length = 403
Score = 81.8 bits (41), Expect = 1e-013
Identities = 167/209 (79%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 195 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 254
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 255 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 314
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|||||||| || | || || || || |||||||| ||||| | |||||||| | |||
Sbjct: 315 agtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaac 374
Query: 472 ccggccaagcagcttcttgttgttgcggc 500
|||||||| || ||| ||||||| ||||
Sbjct: 375 tcggccaaggagtttcctgttgttacggc 403
>gb|BP670363.1|BP670363 BP670363 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-34-M09 3',
mRNA sequence
Length = 419
Score = 79.8 bits (40), Expect = 6e-013
Identities = 173/216 (80%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 191 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 250
Query: 352 gaatctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctc 411
||||| ||| |||| ||||| ||||| ||||| || || || || || || || |||||
Sbjct: 251 gaatcgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctc 310
Query: 412 tgtccacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaac 471
|| ||||| || | || || || || |||||||| ||||||| |||||||| | |||
Sbjct: 311 agt-cacatttctctgacattttcaagaaccatgttgcagtggctgtcaaaagccctaac 369
Query: 472 ccggccaagcagcttcttgttgttgcggcaattgat 507
|||||||| || ||| ||||||| ||||||||||
Sbjct: 370 tcggccaaggagtttcctgttgttagggcaattgat 405
>gb|AI998209.1|AI998209 701515770 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701515770, mRNA sequence
Length = 515
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Plus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 136 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 195
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 196 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 255
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 256 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 315
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 316 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 375
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 376 agaacagagagtggcccggtgttgaattcctcttcctc 413
>gb|CK118493.1|CK118493 216o12.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O12216
5-PRIME, mRNA sequence
Length = 582
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 420 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 361
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 360 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 301
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 300 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 241
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 240 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 181
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 180 agaacagagagtggcccggtgttgaattcctcttcctc 143
>gb|BP562727.2|BP562727 BP562727 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-35-O15 5',
mRNA sequence
Length = 491
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 414 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 355
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 354 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 295
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 294 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 235
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 234 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 175
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 174 agaacagagagtggcccggtgttgaattcctcttcctc 137
>gb|BP815339.1|BP815339 BP815339 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-38-I16 5',
mRNA sequence
Length = 391
Score = 75.8 bits (38), Expect = 9e-012
Identities = 165/206 (80%), Gaps = 1/206 (0%)
Strand = Plus / Minus
Query: 335 aggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttg 394
||||||||||| |||||||||| ||| |||| |||| ||||| ||||| || || ||
Sbjct: 375 aggaacatcttcctgatgaatccatctctgttaacaga-agagctttcttctttcctttt 317
Query: 395 ccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtgg 454
|| || || || ||||| |||||||| || | || || || || |||||||| |||||
Sbjct: 316 ccggttttcggaacctcagtccacatttctctgacattttcaagaaccatgttgcagtgc 257
Query: 455 cgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacc 514
| |||||||| | ||| |||||||| || ||| ||||||| ||||||||||| | |||
Sbjct: 256 ctgtcaaaagccctaactcggccaaggagtttcctgttgttacggcaattgatcaacacc 197
Query: 515 tgggtgttgttcttaacactcatcat 540
|| ||||| |||||||||||||||||
Sbjct: 196 tgagtgttattcttaacactcatcat 171
>gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complete cds
Length = 327
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 317 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 258
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 257 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 198
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 197 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 138
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 137 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 78
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 77 agaacagagagtggcccggtgttgaattcctcttcctc 40
>gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, complete sequence
Length = 619
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 441 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 382
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 381 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 322
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 321 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 262
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 261 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 202
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 201 agaacagagagtggcccggtgttgaattcctcttcctc 164
>emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL37ZF02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 586
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 416 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 357
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 356 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 297
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 296 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 237
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 236 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 177
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 176 agaacagagagtggcccggtgttgaattcctcttcctc 139
>ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.1 mRNA, complete cds
Length = 624
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 446 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 387
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 386 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 327
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 326 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 267
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 266 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 207
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 206 agaacagagagtggcccggtgttgaattcctcttcctc 169
>ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.2 mRNA, complete cds
Length = 586
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 408 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 349
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 348 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 289
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 288 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 229
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 228 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 169
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 168 agaacagagagtggcccggtgttgaattcctcttcctc 131
>ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.3 mRNA, complete cds
Length = 594
Score = 75.8 bits (38), Expect = 9e-012
Identities = 218/278 (78%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 416 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 357
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 356 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 297
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 296 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 237
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcatt 541
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 236 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcata 177
Query: 542 agtactgacagagggcctgtgctaaattcctcttcctc 579
|| || || || || || ||| | ||||||||||||||
Sbjct: 176 agaacagagagtggcccggtgttgaattcctcttcctc 139
>gb|AV535104.1|AV535104 AV535104 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB091a12F 3', mRNA sequence
Length = 326
Score = 73.8 bits (37), Expect = 4e-011
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 195 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 254
Query: 352 gaatctatccttgttcacaggcagagccttctt 384
||||| ||| |||| ||||| ||||| |||||
Sbjct: 255 gaatcgatctctgttaacaggaagagctttctt 287
>gb|BP597520.1|BP597520 BP597520 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-39-O12 3',
mRNA sequence
Length = 435
Score = 73.8 bits (37), Expect = 4e-011
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 195 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 254
Query: 352 gaatctatccttgttcacaggcagagccttctt 384
||||| ||| |||| ||||| ||||| |||||
Sbjct: 255 gaatcgatctctgttaacaggaagagctttctt 287
>gb|BP636278.1|BP636278 BP636278 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-03-P22 3',
mRNA sequence
Length = 469
Score = 73.8 bits (37), Expect = 4e-011
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 240 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 299
Query: 352 gaatctatccttgttcacaggcagagccttctt 384
||||| ||| |||| ||||| ||||| |||||
Sbjct: 300 gaatcgatctctgttaacaggaagagctttctt 332
>gb|BP650469.1|BP650469 BP650469 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-84-H22 3',
mRNA sequence
Length = 410
Score = 73.8 bits (37), Expect = 4e-011
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 194 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 253
Query: 352 gaatctatccttgttcacaggcagagccttctt 384
||||| ||| |||| ||||| ||||| |||||
Sbjct: 254 gaatcgatctctgttaacaggaagagctttctt 286
>gb|BP831765.1|BP831765 BP831765 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-90-C10 5',
mRNA sequence
Length = 364
Score = 73.8 bits (37), Expect = 4e-011
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 440 accatgttacagtggcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcgg 499
|||||||| ||||| | |||||||| | ||| |||||||| || ||| ||||||| |||
Sbjct: 273 accatgttgcagtgcctgtcaaaagccctaactcggccaaggagtttcctgttgttacgg 214
Query: 500 caattgatgagaacctgggtgttgttcttaacactcatcat 540
|||||||| | ||||| ||||| |||||||||||||||||
Sbjct: 213 caattgatcaacacctgagtgttattcttaacactcatcat 173
>gb|BP854615.1|BP854615 BP854615 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-23-N20 5',
mRNA sequence
Length = 371
Score = 73.8 bits (37), Expect = 4e-011
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 440 accatgttacagtggcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcgg 499
|||||||| ||||| | |||||||| | ||| |||||||| || ||| ||||||| |||
Sbjct: 296 accatgttgcagtgcctgtcaaaagccctaactcggccaaggagtttcctgttgttacgg 237
Query: 500 caattgatgagaacctgggtgttgttcttaacactcatcat 540
|||||||| | ||||| ||||| |||||||||||||||||
Sbjct: 236 caattgatcaacacctgagtgttattcttaacactcatcat 196
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 73.8 bits (37), Expect = 4e-011
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 440 accatgttacagtggcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcgg 499
|||||||| ||||| | |||||||| | ||| |||||||| || ||| ||||||| |||
Sbjct: 23179194 accatgttgcagtgcctgtcaaaagccctaactcggccaaggagtttcctgttgttacgg 23179253
Query: 500 caattgatgagaacctgggtgttgttcttaacactcatcat 540
|||||||| | ||||| ||||| |||||||||||||||||
Sbjct: 23179254 caattgatcaacacctgagtgttattcttaacactcatcat 23179294
Score = 73.8 bits (37), Expect = 4e-011
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 23178958 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 23179017
Query: 352 gaatctatccttgttcacaggcagagccttctt 384
||||| ||| |||| ||||| ||||| |||||
Sbjct: 23179018 gaatcgatctctgttaacaggaagagctttctt 23179050
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
Length = 110257
Score = 73.8 bits (37), Expect = 4e-011
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 440 accatgttacagtggcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcgg 499
|||||||| ||||| | |||||||| | ||| |||||||| || ||| ||||||| |||
Sbjct: 88937 accatgttgcagtgcctgtcaaaagccctaactcggccaaggagtttcctgttgttacgg 88996
Query: 500 caattgatgagaacctgggtgttgttcttaacactcatcat 540
|||||||| | ||||| ||||| |||||||||||||||||
Sbjct: 88997 caattgatcaacacctgagtgttattcttaacactcatcat 89037
Score = 73.8 bits (37), Expect = 4e-011
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 88701 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 88760
Query: 352 gaatctatccttgttcacaggcagagccttctt 384
||||| ||| |||| ||||| ||||| |||||
Sbjct: 88761 gaatcgatctctgttaacaggaagagctttctt 88793
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 73.8 bits (37), Expect = 4e-011
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 440 accatgttacagtggcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcgg 499
|||||||| ||||| | |||||||| | ||| |||||||| || ||| ||||||| |||
Sbjct: 23246938 accatgttgcagtgcctgtcaaaagccctaactcggccaaggagtttcctgttgttacgg 23246997
Query: 500 caattgatgagaacctgggtgttgttcttaacactcatcat 540
|||||||| | ||||| ||||| |||||||||||||||||
Sbjct: 23246998 caattgatcaacacctgagtgttattcttaacactcatcat 23247038
Score = 73.8 bits (37), Expect = 4e-011
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||||| || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 23246702 tcacttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgat 23246761
Query: 352 gaatctatccttgttcacaggcagagccttctt 384
||||| ||| |||| ||||| ||||| |||||
Sbjct: 23246762 gaatcgatctctgttaacaggaagagctttctt 23246794
>gb|BP858325.1|BP858325 BP858325 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-36-N11 5',
mRNA sequence
Length = 398
Score = 71.9 bits (36), Expect = 1e-010
Identities = 167/208 (80%), Gaps = 2/208 (0%)
Strand = Plus / Minus
Query: 335 aggaacatcttg-ctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
|||||||||||| |||||||||| ||| |||| ||||| ||||| ||||| || || ||
Sbjct: 378 aggaacatcttggctgatgaatcgatctctgttaacaggaagagctttcttctttccttt 319
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
|| || || || ||||| |||||||| || | || || || || |||||||| |||||
Sbjct: 318 tccggttttcggaacctcagtccacatttctctgacattttcaagaaccatgttgcagtg 259
Query: 454 gcgatcaaaag-cacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaa 512
| ||||||| | | ||| |||||||| || ||| ||||||| ||||||||||| | |
Sbjct: 258 cctgtcaaaaggccctaactcggccaaggagtttcctgttgttacggcaattgatcaaca 199
Query: 513 cctgggtgttgttcttaacactcatcat 540
|||| ||||| |||||||||||||||||
Sbjct: 198 cctgagtgttattcttaacactcatcat 171
>gb|BP868432.1|BP868432 BP868432 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-84-F15 5',
mRNA sequence
Length = 396
Score = 71.9 bits (36), Expect = 1e-010
Identities = 163/204 (79%), Gaps = 1/204 (0%)
Strand = Plus / Minus
Query: 337 gaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttgcc 396
|||||||||||||||||||| ||| | || ||||| ||||| ||||| || || || ||
Sbjct: 373 gaacatcttgctgatgaatcgatctcttttaacaggaagagctttcttctttccttttcc 314
Query: 397 agtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtggcg 456
|| || || ||||| |||||||| || | || || || || |||||||| ||||| |
Sbjct: 313 ggttttcggaacctcagtccacatttctctgacattttcaagaaccatgttgcagtgcct 254
Query: 457 atcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacctg 516
||||| || | ||| |||||||| || ||| ||||||| ||||||||||| | |||||
Sbjct: 253 gtcaaa-gccctaactcggccaaggagtttcctgttgttacggcaattgatcaacacctg 195
Query: 517 ggtgttgttcttaacactcatcat 540
||||| |||||||||||||||||
Sbjct: 194 agtgttattcttaacactcatcat 171
>gb|AU226468.1|AU226468 AU226468 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-35-O15 3',
mRNA sequence
Length = 425
Score = 69.9 bits (35), Expect = 5e-010
Identities = 188/239 (78%)
Strand = Plus / Plus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 171 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 230
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
|||||| || || || ||||| ||||| || ||||| ||||| ||||| |||||||||
Sbjct: 231 ctgttcaacggaagtgctttcttcttgcctttcccagttttgggaacctcagtccacatc 290
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 291 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 350
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcat 540
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 351 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcat 409
>gb|H36625.1|H36625 14293 Lambda-PRL2 Arabidopsis thaliana cDNA clone 175N1T7, mRNA
sequence
Length = 450
Score = 67.9 bits (34), Expect = 2e-009
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 440 accatgttacagtggcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcgg 499
|||||||| ||||| | | |||||| | ||| |||||||| || ||| ||||||| |||
Sbjct: 288 accatgttgcagtgcctgtnaaaagccctaactcggccaaggagtttcctgttgttacgg 229
Query: 500 caattgatgagaacctgggtgttgttcttaacactcatcat 540
|||||||| | ||||| ||||| |||||||||||||||||
Sbjct: 228 caattgatcaacacctgagtgttattcttaacactcatcat 188
>gb|BP645975.1|BP645975 BP645975 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-70-J05 3',
mRNA sequence
Length = 393
Score = 67.9 bits (34), Expect = 2e-009
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 295 cttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaa 354
|||||||||||| || ||||| ||||| ||||| || | ||||||||||||||||||||
Sbjct: 200 cttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaa 259
Query: 355 tctatccttgttcacaggcagagccttctt 384
|| ||| |||| ||||| ||||| |||||
Sbjct: 260 tcgatctctgttaacaggaagagctttctt 289
>gb|BP850718.1|BP850718 BP850718 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-14-A12 5',
mRNA sequence
Length = 401
Score = 61.9 bits (31), Expect = 1e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 458 tcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacctgg 517
|||||||| | ||| |||||||| || ||| | ||||| ||||||||||| | |||||
Sbjct: 255 tcaaaagccctaactcggccaaggagtttccttttgttacggcaattgatcaacacctga 196
Query: 518 gtgttgttcttaacactcatcat 540
||||| |||||||||||||||||
Sbjct: 195 gtgttattcttaacactcatcat 173
>gb|BP621376.1|BP621376 BP621376 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-41-B20 3',
mRNA sequence
Length = 426
Score = 58.0 bits (29), Expect = 2e-006
Identities = 78/93 (83%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 292 tcacttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgat 351
||||||||||||| | || ||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 192 tcacttggggttc-tgaggacgataatgactgagtctccacgcaggaacatcttgctgat 250
Query: 352 gaatctatccttgttcacaggcagagccttctt 384
||||| ||| |||| ||||| ||||| |||||
Sbjct: 251 gaatcgatctctgttaacaggaagagctttctt 283
>gb|BP851888.1|BP851888 BP851888 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-N19 5',
mRNA sequence
Length = 388
Score = 56.0 bits (28), Expect = 8e-006
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
||||| || ||| ||||||| ||||||||||| | |||||| ||||| ||||| || |||
Sbjct: 258 ccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctc 199
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctc 579
||||| || || || || || || ||| | ||||||||||||||
Sbjct: 198 atcataagaacagagagtggcccggtgttgaattcctcttcctc 155
>gb|BP571612.1|BP571612 BP571612 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-O18 3',
mRNA sequence
Length = 451
Score = 54.0 bits (27), Expect = 3e-005
Identities = 186/239 (77%)
Strand = Plus / Plus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||| | ||||| | |||
Sbjct: 176 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttggttatgaaccgatct 235
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| ||||| |||
Sbjct: 236 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccaaatc 295
Query: 422 tcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccggccaagc 481
|| | || || || || |||||||| ||||| | ||||| || | || || |||||
Sbjct: 296 tctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcactcgcccaaga 355
Query: 482 agcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactcatcat 540
|| ||| ||||||| ||||||||||| | |||||| ||||| ||||| || ||||||||
Sbjct: 356 agtttcctgttgttccggcaattgattaaaacctgagtgttattcttgacgctcatcat 414
>gb|AV549536.1|AV549536 AV549536 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09a07R 5', mRNA sequence
Length = 352
Score = 52.0 bits (26), Expect = 1e-004
Identities = 98/122 (80%)
Strand = Plus / Minus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 179 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 120
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 119 ctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 60
Query: 422 tc 423
||
Sbjct: 59 tc 58
>gb|BP623210.1|BP623210 BP623210 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-05-P16 3',
mRNA sequence
Length = 368
Score = 52.0 bits (26), Expect = 1e-004
Identities = 98/122 (80%)
Strand = Plus / Plus
Query: 302 ttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaatctatcc 361
||||| || ||||| ||||||||||| || | || ||||||||||| ||||| | |||
Sbjct: 204 ttcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttatgaaccgatct 263
Query: 362 ttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtccacatc 421
||||||| || || || ||||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 264 ctgttcacgggaagtgctttcttcttgcctttcccagttttcggaacctcagtccacatc 323
Query: 422 tc 423
||
Sbjct: 324 tc 325
>gb|BP821598.1|BP821598 BP821598 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-58-J16 5',
mRNA sequence
Length = 398
Score = 48.1 bits (24), Expect = 0.002
Identities = 84/104 (80%)
Strand = Plus / Minus
Query: 476 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 535
||||| || ||| |||| || ||||||||||| | |||||| ||||| ||||| || |||
Sbjct: 233 ccaagaagtttcctgtttttccggcaattgattaaaacctgagtgttattcttgacgctc 174
Query: 536 atcattagtactgacagagggcctgtgctaaattcctcttcctc 579
||||| || || || || || || ||| | ||||||||||||||
Sbjct: 173 atcataagaacagagagtggcccggtgttgaattcctcttcctc 130
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 297,708
Number of Sequences: 1013581
Number of extensions: 297708
Number of successful extensions: 25412
Number of sequences better than 0.5: 60
Number of HSP's better than 0.5 without gapping: 59
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 25131
Number of HSP's gapped (non-prelim): 265
length of query: 687
length of database: 908,940,872
effective HSP length: 20
effective length of query: 667
effective length of database: 888,669,252
effective search space: 592742391084
effective search space used: 592742391084
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)