BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.8
(708 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|F19854.1|F19854 ATTS5893 Ors-B Arabidopsis thaliana cDNA... 56 8e-006
gb|BE038151.1|BE038151 AA09E09 AA Arabidopsis thaliana cDNA... 56 8e-006
gb|BE039244.1|BE039244 AC01A08 AC Arabidopsis thaliana cDNA... 56 8e-006
gb|AV785733.1|AV785733 AV785733 RAFL6 Arabidopsis thaliana ... 56 8e-006
gb|AV787104.1|AV787104 AV787104 RAFL6 Arabidopsis thaliana ... 56 8e-006
gb|AV787108.1|AV787108 AV787108 RAFL6 Arabidopsis thaliana ... 56 8e-006
gb|AV788015.1|AV788015 AV788015 RAFL6 Arabidopsis thaliana ... 56 8e-006
gb|AV802724.1|AV802724 AV802724 RAFL9 Arabidopsis thaliana ... 56 8e-006
gb|AV824639.1|AV824639 AV824639 RAFL6 Arabidopsis thaliana ... 56 8e-006
gb|CB263473.1|CB263473 20-E9724-008-016-H06-pBl2 MPIZ-ADIS-... 56 8e-006
gb|CD531919.1|CD531919 12J01 Arabidopsis Leaf Senescence Li... 56 8e-006
gb|CD534117.1|CD534117 35L2 Arabidopsis Leaf Senescence Lib... 56 8e-006
gb|BP576809.1|BP576809 BP576809 RAFL14 Arabidopsis thaliana... 56 8e-006
gb|BP588279.1|BP588279 BP588279 RAFL15 Arabidopsis thaliana... 56 8e-006
gb|BP591843.1|BP591843 BP591843 RAFL15 Arabidopsis thaliana... 56 8e-006
gb|BP591915.1|BP591915 BP591915 RAFL15 Arabidopsis thaliana... 56 8e-006
gb|BP602416.1|BP602416 BP602416 RAFL16 Arabidopsis thaliana... 56 8e-006
gb|BP617033.1|BP617033 BP617033 RAFL16 Arabidopsis thaliana... 56 8e-006
gb|BP654917.1|BP654917 BP654917 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP656997.1|BP656997 BP656997 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP560607.2|BP560607 BP560607 RAFL4 Arabidopsis thaliana ... 56 8e-006
gb|BP802211.1|BP802211 BP802211 RAFL14 Arabidopsis thaliana... 56 8e-006
gb|BP809885.1|BP809885 BP809885 RAFL16 Arabidopsis thaliana... 56 8e-006
gb|BP813417.1|BP813417 BP813417 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP821343.1|BP821343 BP821343 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP829420.1|BP829420 BP829420 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP829505.1|BP829505 BP829505 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP834741.1|BP834741 BP834741 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP835536.1|BP835536 BP835536 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP840268.1|BP840268 BP840268 RAFL19 Arabidopsis thaliana... 56 8e-006
gb|BP851191.1|BP851191 BP851191 RAFL21 Arabidopsis thaliana... 56 8e-006
gb|BP853998.1|BP853998 BP853998 RAFL21 Arabidopsis thaliana... 56 8e-006
gb|AY052343.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 56 8e-006
gb|AY056377.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 56 8e-006
gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R0... 56 8e-006
gb|AY143800.1| Arabidopsis thaliana At2g23090/F21P24.15 mRN... 56 8e-006
gb|AY085311.1| Arabidopsis thaliana clone 14468 mRNA, compl... 56 8e-006
emb|BX819905.1|CNS0A9GG Arabidopsis thaliana Full-length cD... 56 8e-006
emb|BX821290.1|CNS0A98Y Arabidopsis thaliana Full-length cD... 56 8e-006
ref|NM_127873.3| Arabidopsis thaliana unknown protein AT2G2... 56 8e-006
gb|BP797782.1|BP797782 BP797782 RAFL14 Arabidopsis thaliana... 54 3e-005
gb|BP812336.1|BP812336 BP812336 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP828254.1|BP828254 BP828254 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|BP839059.1|BP839059 BP839059 RAFL19 Arabidopsis thaliana... 54 3e-005
gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P... 54 3e-005
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 54 3e-005
gb|AV828766.1|AV828766 AV828766 RAFL9 Arabidopsis thaliana ... 52 1e-004
gb|BP591032.1|BP591032 BP591032 RAFL15 Arabidopsis thaliana... 50 5e-004
gb|BP832596.1|BP832596 BP832596 RAFL19 Arabidopsis thaliana... 50 5e-004
gb|BP847952.1|BP847952 BP847952 RAFL21 Arabidopsis thaliana... 50 5e-004
gb|AV522137.1|AV522137 AV522137 Arabidopsis thaliana aboveg... 48 0.002
gb|BP568258.1|BP568258 BP568258 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP583966.1|BP583966 BP583966 RAFL14 Arabidopsis thaliana... 48 0.002
gb|BP589484.1|BP589484 BP589484 RAFL15 Arabidopsis thaliana... 48 0.002
gb|BP602671.1|BP602671 BP602671 RAFL16 Arabidopsis thaliana... 48 0.002
gb|BP614016.1|BP614016 BP614016 RAFL16 Arabidopsis thaliana... 48 0.002
gb|BP651762.1|BP651762 BP651762 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP657047.1|BP657047 BP657047 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP806898.1|BP806898 BP806898 RAFL16 Arabidopsis thaliana... 48 0.002
gb|BP822249.1|BP822249 BP822249 RAFL19 Arabidopsis thaliana... 48 0.002
gb|BP854157.1|BP854157 BP854157 RAFL21 Arabidopsis thaliana... 48 0.002
emb|BX821559.1|CNS0A96B Arabidopsis thaliana Full-length cD... 48 0.002
gb|BH849450.1|BH849450 SALK_069708.53.10.x Arabidopsis thal... 46 0.008
gb|Z17529.1|Z17529 ATTS0103 AC16H Arabidopsis thaliana cDNA... 46 0.008
gb|H76367.1|H76367 18072 Lambda-PRL2 Arabidopsis thaliana c... 46 0.008
gb|AI999629.1|AI999629 701556759 A. thaliana, Columbia Col-... 44 0.032
gb|BP592341.1|BP592341 BP592341 RAFL15 Arabidopsis thaliana... 42 0.13
gb|BP630169.1|BP630169 BP630169 RAFL17 Arabidopsis thaliana... 42 0.13
gb|BP638670.1|BP638670 BP638670 RAFL19 Arabidopsis thaliana... 42 0.13
gb|BP805505.1|BP805505 BP805505 RAFL16 Arabidopsis thaliana... 42 0.13
emb|BX821485.1|CNS0A95U Arabidopsis thaliana Full-length cD... 42 0.13
>gb|F19854.1|F19854 ATTS5893 Ors-B Arabidopsis thaliana cDNA 3', mRNA sequence
Length = 351
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 250 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 309
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 310 tgcatacaaaccttgcactg 329
>gb|BE038151.1|BE038151 AA09E09 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 550
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 281 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 222
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 221 tgcatacaaaccttgcactg 202
>gb|BE039244.1|BE039244 AC01A08 AC Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 470
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 207 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 148
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 147 tgcatacaaaccttgcactg 128
>gb|AV785733.1|AV785733 AV785733 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-68-D15 3',
mRNA sequence
Length = 405
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 222 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 281
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 282 tgcatacaaaccttgcactg 301
>gb|AV787104.1|AV787104 AV787104 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-74-B18 3',
mRNA sequence
Length = 409
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 249 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 308
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 309 tgcatacaaaccttgcactg 328
>gb|AV787108.1|AV787108 AV787108 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-74-C05 3',
mRNA sequence
Length = 401
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 208 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 267
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 268 tgcatacaaaccttgcactg 287
>gb|AV788015.1|AV788015 AV788015 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-77-N07 3',
mRNA sequence
Length = 421
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 209 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 268
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 269 tgcatacaaaccttgcactg 288
>gb|AV802724.1|AV802724 AV802724 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-32-P22 3',
mRNA sequence
Length = 395
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 209 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 268
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 269 tgcatacaaaccttgcactg 288
>gb|AV824639.1|AV824639 AV824639 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-74-C05 5',
mRNA sequence
Length = 481
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 271 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 212
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 211 tgcatacaaaccttgcactg 192
>gb|CB263473.1|CB263473 20-E9724-008-016-H06-pBl2 MPIZ-ADIS-008 Arabidopsis thaliana cDNA
clone MPIZp767H0616Q 5-PRIME, mRNA sequence
Length = 483
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 238 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 297
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 298 tgcatacaaaccttgcactg 317
>gb|CD531919.1|CD531919 12J01 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 384
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 176 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 117
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 116 tgcatacaaaccttgcactg 97
>gb|CD534117.1|CD534117 35L2 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 466
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 219 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 160
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 159 tgcatacaaaccttgcactg 140
>gb|BP576809.1|BP576809 BP576809 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-93-G19 3',
mRNA sequence
Length = 431
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 247 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 306
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 307 tgcatacaaaccttgcactg 326
>gb|BP588279.1|BP588279 BP588279 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-45-L11 3',
mRNA sequence
Length = 429
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 249 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 308
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 309 tgcatacaaaccttgcactg 328
>gb|BP591843.1|BP591843 BP591843 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-D15 3',
mRNA sequence
Length = 439
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 249 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 308
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 309 tgcatacaaaccttgcactg 328
>gb|BP591915.1|BP591915 BP591915 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-16-H05 3',
mRNA sequence
Length = 439
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 246 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 305
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 306 tgcatacaaaccttgcactg 325
>gb|BP602416.1|BP602416 BP602416 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-54-K14 3',
mRNA sequence
Length = 421
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 238 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 297
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 298 tgcatacaaaccttgcactg 317
>gb|BP617033.1|BP617033 BP617033 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-22-F08 3',
mRNA sequence
Length = 447
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 223 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 282
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 283 tgcatacaaaccttgcactg 302
>gb|BP654917.1|BP654917 BP654917 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-19-E23 3',
mRNA sequence
Length = 393
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 209 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 268
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 269 tgcatacaaaccttgcactg 288
>gb|BP656997.1|BP656997 BP656997 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-29-G05 3',
mRNA sequence
Length = 407
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 245 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 304
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 305 tgcatacaaaccttgcactg 324
>gb|BP560607.2|BP560607 BP560607 RAFL4 Arabidopsis thaliana cDNA clone RAFL04-14-I04 5',
mRNA sequence
Length = 680
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 310 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 251
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 250 tgcatacaaaccttgcactg 231
>gb|BP802211.1|BP802211 BP802211 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-23-G12 5',
mRNA sequence
Length = 368
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 265 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 206
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 205 tgcatacaaaccttgcactg 186
>gb|BP809885.1|BP809885 BP809885 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-23-L20 5',
mRNA sequence
Length = 399
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 301 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 242
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 241 tgcatacaaaccttgcactg 222
>gb|BP813417.1|BP813417 BP813417 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-06-G01 5',
mRNA sequence
Length = 392
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 293 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 234
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 233 tgcatacaaaccttgcactg 214
>gb|BP821343.1|BP821343 BP821343 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-57-K19 5',
mRNA sequence
Length = 395
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 227 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 168
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 167 tgcatacaaaccttgcactg 148
>gb|BP829420.1|BP829420 BP829420 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-82-A10 5',
mRNA sequence
Length = 374
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 267 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 208
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 207 tgcatacaaaccttgcactg 188
>gb|BP829505.1|BP829505 BP829505 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-82-E16 5',
mRNA sequence
Length = 383
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 297 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 238
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 237 tgcatacaaaccttgcactg 218
>gb|BP834741.1|BP834741 BP834741 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-11-D24 5',
mRNA sequence
Length = 378
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 265 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 206
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 205 tgcatacaaaccttgcactg 186
>gb|BP835536.1|BP835536 BP835536 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-13-L02 5',
mRNA sequence
Length = 389
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 298 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 239
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 238 tgcatacaaaccttgcactg 219
>gb|BP840268.1|BP840268 BP840268 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-29-K20 5',
mRNA sequence
Length = 392
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 269 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 210
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 209 tgcatacaaaccttgcactg 190
>gb|BP851191.1|BP851191 BP851191 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-15-J06 5',
mRNA sequence
Length = 410
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 331 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 272
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 271 tgcatacaaaccttgcactg 252
>gb|BP853998.1|BP853998 BP853998 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-60-C07 5',
mRNA sequence
Length = 395
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 268 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 209
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 208 tgcatacaaaccttgcactg 189
>gb|AY052343.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 480
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 270 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 211
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 210 tgcatacaaaccttgcactg 191
>gb|AY056377.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 475
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 267 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 208
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 207 tgcatacaaaccttgcactg 188
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence
Length = 2116
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 310 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 251
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 250 tgcatacaaaccttgcactg 231
>gb|AY143800.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds
Length = 237
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 194 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 135
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 134 tgcatacaaaccttgcactg 115
>gb|AY085311.1| Arabidopsis thaliana clone 14468 mRNA, complete sequence
Length = 571
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 329 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 270
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 269 tgcatacaaaccttgcactg 250
>emb|BX819905.1|CNS0A9GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS46ZE05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 487
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 237 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 178
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 177 tgcatacaaaccttgcactg 158
>emb|BX821290.1|CNS0A98Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL32ZB02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 535
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 319 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 260
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 259 tgcatacaaaccttgcactg 240
>ref|NM_127873.3| Arabidopsis thaliana unknown protein AT2G23090 mRNA, complete cds
Length = 580
Score = 56.0 bits (28), Expect = 8e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 330 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 271
Query: 433 tgcatgcacactttgcactg 452
||||| || || ||||||||
Sbjct: 270 tgcatacaaaccttgcactg 251
>gb|BP797782.1|BP797782 BP797782 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-04-M12 5',
mRNA sequence
Length = 381
Score = 54.0 bits (27), Expect = 3e-005
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 374 gatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgttt 433
||||||| ||||| |||||||||| ||| |||||||| | || || || ||||||||||
Sbjct: 258 gatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgttt 199
Query: 434 gcatgcacactttgcactg 452
|||| || || ||||||||
Sbjct: 198 gcatacaaaccttgcactg 180
>gb|BP812336.1|BP812336 BP812336 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-03-B14 5',
mRNA sequence
Length = 406
Score = 54.0 bits (27), Expect = 3e-005
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 374 gatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgttt 433
||||||| ||||| |||||||||| ||| |||||||| | || || || ||||||||||
Sbjct: 272 gatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgttt 213
Query: 434 gcatgcacactttgcactg 452
|||| || || ||||||||
Sbjct: 212 gcatacaaaccttgcactg 194
>gb|BP828254.1|BP828254 BP828254 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-78-E09 5',
mRNA sequence
Length = 360
Score = 54.0 bits (27), Expect = 3e-005
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 374 gatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgttt 433
||||||| ||||| |||||||||| ||| |||||||| | || || || ||||||||||
Sbjct: 265 gatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgttt 206
Query: 434 gcatgcacactttgcactg 452
|||| || || ||||||||
Sbjct: 205 gcatacaaaccttgcactg 187
>gb|BP839059.1|BP839059 BP839059 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-25-N21 5',
mRNA sequence
Length = 411
Score = 54.0 bits (27), Expect = 3e-005
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 374 gatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgttt 433
||||||| ||||| |||||||||| ||| |||||||| | || || || ||||||||||
Sbjct: 273 gatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgttt 214
Query: 434 gcatgcacactttgcactg 452
|||| || || ||||||||
Sbjct: 213 gcatacaaaccttgcactg 195
>gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P24 map CIC06C07, complete
sequence
Length = 94038
Score = 54.0 bits (27), Expect = 3e-005
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 61261 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 61320
Query: 433 tgcatgcacactttgcact 451
||||| || || |||||||
Sbjct: 61321 tgcatacaaaccttgcact 61339
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 54.0 bits (27), Expect = 3e-005
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 9836780 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 9836839
Query: 433 tgcatgcacactttgcact 451
||||| || || |||||||
Sbjct: 9836840 tgcatacaaaccttgcact 9836858
>gb|AV828766.1|AV828766 AV828766 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-32-P22 5',
mRNA sequence
Length = 342
Score = 52.0 bits (26), Expect = 1e-004
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 375 atgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtttg 434
|||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||||
Sbjct: 263 atgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtttg 204
Query: 435 catgcacactttgcactg 452
||| || || ||||||||
Sbjct: 203 catacaaaccttgcactg 186
>gb|BP591032.1|BP591032 BP591032 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-13-C04 3',
mRNA sequence
Length = 420
Score = 50.1 bits (25), Expect = 5e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 244 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 303
Query: 433 tgcat 437
|||||
Sbjct: 304 tgcat 308
>gb|BP832596.1|BP832596 BP832596 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-93-C11 5',
mRNA sequence
Length = 398
Score = 50.1 bits (25), Expect = 5e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 267 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 208
Query: 433 tgcat 437
|||||
Sbjct: 207 tgcat 203
>gb|BP847952.1|BP847952 BP847952 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-03-L05 5',
mRNA sequence
Length = 390
Score = 50.1 bits (25), Expect = 5e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 373 ggatgcttggcctcggcgtgctcccggcacttcacttcagtcgtggtacacatgaatgtt 432
|||||||| ||||| |||||||||| ||| |||||||| | || || || |||||||||
Sbjct: 276 ggatgcttcgcctccgcgtgctccctgcatttcacttccgatgtcgtgcagatgaatgtt 217
Query: 433 tgcat 437
|||||
Sbjct: 216 tgcat 212
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 253,488
Number of Sequences: 1013581
Number of extensions: 253488
Number of successful extensions: 21830
Number of sequences better than 0.5: 71
Number of HSP's better than 0.5 without gapping: 67
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 21675
Number of HSP's gapped (non-prelim): 159
length of query: 708
length of database: 908,940,872
effective HSP length: 20
effective length of query: 688
effective length of database: 888,669,252
effective search space: 611404445376
effective search space used: 611404445376
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)