BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.723
(715 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14... 62 1e-007
ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G3... 62 1e-007
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 62 1e-007
emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGO... 60 5e-007
dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for put... 60 5e-007
dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhea... 60 5e-007
ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G2... 60 5e-007
gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis tha... 52 1e-004
gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11... 52 1e-004
ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G2... 52 1e-004
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 52 1e-004
gb|BE525238.1|BE525238 M60B11STM Arabidopsis developing see... 44 0.033
gb|BE529725.1|BE529725 M75O17STM Arabidopsis developing see... 44 0.033
gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO... 44 0.033
gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1... 44 0.033
emb|AX505699.1| Sequence 394 from Patent WO0216655 44 0.033
gb|AC007660.2|AC007660 Arabidopsis thaliana chromosome II s... 44 0.033
emb|BX820029.1|CNS0A8FQ Arabidopsis thaliana Full-length cD... 44 0.033
emb|BX819012.1|CNS0A8VW Arabidopsis thaliana Full-length cD... 44 0.033
emb|BX819256.1|CNS0A8XD Arabidopsis thaliana Full-length cD... 44 0.033
emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cD... 44 0.033
dbj|AK222157.1| Arabidopsis thaliana mRNA for rhodanese lik... 44 0.033
ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT... 44 0.033
ref|NM_129638.2| Arabidopsis thaliana unknown protein AT2G4... 44 0.033
gb|CL476825.1|CL476825 SAIL_260_A03.v1 SAIL Collection Arab... 42 0.13
emb|AX506431.1| Sequence 1126 from Patent WO0216655 42 0.13
emb|AX651969.1| Sequence 856 from Patent WO03000898 42 0.13
gb|BZ761910.1|BZ761910 SALK_083022.50.80.x Arabidopsis thal... 40 0.51
gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 40 0.51
dbj|AB005241.1| Arabidopsis thaliana genomic DNA, chromosom... 40 0.51
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 40 0.51
ref|NM_120638.2| Arabidopsis thaliana APC1; ubiquitin-prote... 40 0.51
emb|AL085639.1|CNS00QCP Arabidopsis thaliana genome survey ... 38 2.0
gb|BZ377730.1|BZ377730 SALK_106089.15.00.x Arabidopsis thal... 38 2.0
gb|BZ378856.1|BZ378856 SALK_112057.47.85.x Arabidopsis thal... 38 2.0
gb|BZ378858.1|BZ378858 SALK_112059.54.15.x Arabidopsis thal... 38 2.0
gb|BZ379147.1|BZ379147 SALK_112923.34.65.x Arabidopsis thal... 38 2.0
gb|BZ661709.1|BZ661709 SALK_025183.55.25.x Arabidopsis thal... 38 2.0
gb|AF296827.1|F13C19 Arabidopsis thaliana BAC F13C19 38 2.0
emb|AX059513.1| Sequence 246 from Patent WO0055325 38 2.0
gb|AC006217.4| Arabidopsis thaliana chromosome 2 clone T13E... 38 2.0
dbj|AB046429.1| Arabidopsis thaliana DNA, chromosome 5 cent... 38 2.0
dbj|AB046430.1| Arabidopsis thaliana DNA, chromosome 5 cent... 38 2.0
ref|NM_114773.3| Arabidopsis thaliana unknown protein AT3G4... 38 2.0
gb|B96649.1|B96649 T30P20TR TAMU Arabidopsis thaliana genom... 36 8.0
gb|CL491979.1|CL491979 SAIL_562_E07.v1 SAIL Collection Arab... 36 8.0
gb|AI993691.1|AI993691 701497176 A. thaliana, Ohio State cl... 36 8.0
gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed... 36 8.0
gb|CD531517.1|CD531517 11B14 Arabidopsis Leaf Senescence Li... 36 8.0
gb|CD532317.1|CD532317 26K18 Arabidopsis Leaf Senescence Li... 36 8.0
gb|CD534604.1|CD534604 40D20 Arabidopsis Leaf Senescence Li... 36 8.0
gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flower... 36 8.0
gb|AV442417.1|AV442417 AV442417 Arabidopsis thaliana above-... 36 8.0
gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana ... 36 8.0
gb|CK121100.1|CK121100 204j21.p1 AtM1 Arabidopsis thaliana ... 36 8.0
emb|X97485.1|ATORF03 A.thaliana mRNA for unknown protein, O... 36 8.0
gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein... 36 8.0
gb|AY140071.1| Arabidopsis thaliana unknown protein (At3g26... 36 8.0
gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence 36 8.0
gb|BT000941.1| Arabidopsis thaliana clone C105223 putative ... 36 8.0
gb|BT003411.1| Arabidopsis thaliana unknown protein (At3g26... 36 8.0
gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis tha... 36 8.0
gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC ... 36 8.0
gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J... 36 8.0
gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F... 36 8.0
emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cD... 36 8.0
dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosom... 36 8.0
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 36 8.0
emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic se... 36 8.0
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 36 8.0
tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase ... 36 8.0
gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, ... 36 8.0
ref|NM_113566.2| Arabidopsis thaliana unknown protein AT3G2... 36 8.0
ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 36 8.0
ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT... 36 8.0
ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synth... 36 8.0
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 36 8.0
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 36 8.0
>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete
sequence
Length = 96801
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 467 ttcactgtgattgttgctcaaaagaaccaccacaccaagttctttca 513
|||||||| ||||| ||||| |||||||||||||||||||| |||||
Sbjct: 50463 ttcactgtcattgtggctcagaagaaccaccacaccaagttgtttca 50509
>ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 mRNA, complete cds
Length = 2637
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 467 ttcactgtgattgttgctcaaaagaaccaccacaccaagttctttca 513
|||||||| ||||| ||||| |||||||||||||||||||| |||||
Sbjct: 2221 ttcactgtcattgtggctcagaagaaccaccacaccaagttgtttca 2267
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 467 ttcactgtgattgttgctcaaaagaaccaccacaccaagttctttca 513
|||||||| ||||| ||||| |||||||||||||||||||| |||||
Sbjct: 13980099 ttcactgtcattgtggctcagaagaaccaccacaccaagttgtttca 13980053
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttggt 43
||||||||||||||||||||||
Sbjct: 17019013 gaagatcaatgcaaagcttggt 17019034
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 3091475 ggttagttctcgtcaatgg 3091457
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 606 ctgggatgattggaacaa 623
||||||||||||||||||
Sbjct: 5712517 ctgggatgattggaacaa 5712534
>emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE9 protein (At5g21150 gene)
Length = 2897
Score = 60.0 bits (30), Expect = 5e-007
Identities = 135/170 (79%)
Strand = Plus / Plus
Query: 341 aaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccaggtc 400
|||||||| ||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 2113 aaaccagagcacatcattattttcagggatggtgtaagcgagtctcagttcaatcaagtt 2172
Query: 401 atcaacattgagctggatcagatcatcgaggcatgtaagtttctggatgagaagtggtca 460
| || ||||| |||||||||| || ||||||| |||||||| ||||| | ||||
Sbjct: 2173 cttaatattgaattggatcagatgatgcaggcatgcaagtttcttgatgatacgtggcat 2232
Query: 461 cccaagttcactgtgattgttgctcaaaagaaccaccacaccaagttctt 510
|| ||||| || ||||| ||||| || |||||||||||||| ||||||||
Sbjct: 2233 ccgaagtttacagtgatagttgcccagaagaaccaccacacaaagttctt 2282
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 602 catgctgggatgattggaacaacaaggcccacccactatcatgttctgcacgacgagat 660
|||||||| ||||||||||| |||||||| || || || ||||||||| | ||||||||
Sbjct: 2374 catgctggcatgattggaactacaaggccaacacattaccatgttctgtatgacgagat 2432
Score = 36.2 bits (18), Expect = 8.0
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactcgttg 58
||||||| ||||| ||||||||||| |||| ||||||
Sbjct: 1790 tgaagataaatgccaagcttggtggattgaattcgttg 1827
>dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative zwille/pinhead,
complete cds, clone: RAFL19-56-B01
Length = 3090
Score = 60.0 bits (30), Expect = 5e-007
Identities = 135/170 (79%)
Strand = Plus / Plus
Query: 341 aaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccaggtc 400
|||||||| ||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 2294 aaaccagagcacatcattattttcagggatggtgtaagcgagtctcagttcaatcaagtt 2353
Query: 401 atcaacattgagctggatcagatcatcgaggcatgtaagtttctggatgagaagtggtca 460
| || ||||| |||||||||| || ||||||| |||||||| ||||| | ||||
Sbjct: 2354 cttaatattgaattggatcagatgatgcaggcatgcaagtttcttgatgatacgtggcat 2413
Query: 461 cccaagttcactgtgattgttgctcaaaagaaccaccacaccaagttctt 510
|| ||||| || ||||| ||||| || |||||||||||||| ||||||||
Sbjct: 2414 ccgaagtttacagtgatagttgcccagaagaaccaccacacaaagttctt 2463
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 602 catgctgggatgattggaacaacaaggcccacccactatcatgttctgcacgacgagat 660
|||||||| ||||||||||| |||||||| || || || ||||||||| | ||||||||
Sbjct: 2555 catgctggcatgattggaactacaaggccaacacattaccatgttctgtatgacgagat 2613
Score = 36.2 bits (18), Expect = 8.0
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactcgttg 58
||||||| ||||| ||||||||||| |||| ||||||
Sbjct: 1971 tgaagataaatgccaagcttggtggattgaattcgttg 2008
>dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhead-like protein, partial
cds, clone: RAFL22-12-J01
Length = 1966
Score = 60.0 bits (30), Expect = 5e-007
Identities = 135/170 (79%)
Strand = Plus / Plus
Query: 341 aaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccaggtc 400
|||||||| ||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 1167 aaaccagagcacatcattattttcagggatggtgtaagcgagtctcagttcaatcaagtt 1226
Query: 401 atcaacattgagctggatcagatcatcgaggcatgtaagtttctggatgagaagtggtca 460
| || ||||| |||||||||| || ||||||| |||||||| ||||| | ||||
Sbjct: 1227 cttaatattgaattggatcagatgatgcaggcatgcaagtttcttgatgatacgtggcat 1286
Query: 461 cccaagttcactgtgattgttgctcaaaagaaccaccacaccaagttctt 510
|| ||||| || ||||| ||||| || |||||||||||||| ||||||||
Sbjct: 1287 ccgaagtttacagtgatagttgcccagaagaaccaccacacaaagttctt 1336
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 602 catgctgggatgattggaacaacaaggcccacccactatcatgttctgcacgacgagat 660
|||||||| ||||||||||| |||||||| || || || ||||||||| | ||||||||
Sbjct: 1428 catgctggcatgattggaactacaaggccaacacattaccatgttctgtatgacgagat 1486
Score = 36.2 bits (18), Expect = 8.0
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactcgttg 58
||||||| ||||| ||||||||||| |||| ||||||
Sbjct: 844 tgaagataaatgccaagcttggtggattgaattcgttg 881
>ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G21150 mRNA, complete cds
Length = 3018
Score = 60.0 bits (30), Expect = 5e-007
Identities = 135/170 (79%)
Strand = Plus / Plus
Query: 341 aaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccaggtc 400
|||||||| ||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 2229 aaaccagagcacatcattattttcagggatggtgtaagcgagtctcagttcaatcaagtt 2288
Query: 401 atcaacattgagctggatcagatcatcgaggcatgtaagtttctggatgagaagtggtca 460
| || ||||| |||||||||| || ||||||| |||||||| ||||| | ||||
Sbjct: 2289 cttaatattgaattggatcagatgatgcaggcatgcaagtttcttgatgatacgtggcat 2348
Query: 461 cccaagttcactgtgattgttgctcaaaagaaccaccacaccaagttctt 510
|| ||||| || ||||| ||||| || |||||||||||||| ||||||||
Sbjct: 2349 ccgaagtttacagtgatagttgcccagaagaaccaccacacaaagttctt 2398
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 602 catgctgggatgattggaacaacaaggcccacccactatcatgttctgcacgacgagat 660
|||||||| ||||||||||| |||||||| || || || ||||||||| | ||||||||
Sbjct: 2490 catgctggcatgattggaactacaaggccaacacattaccatgttctgtatgacgagat 2548
Score = 36.2 bits (18), Expect = 8.0
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactcgttg 58
||||||| ||||| ||||||||||| |||| ||||||
Sbjct: 1906 tgaagataaatgccaagcttggtggattgaattcgttg 1943
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
V, complete sequence
Length = 84413
Score = 52.0 bits (26), Expect = 1e-004
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 429 aggcatgtaagtttctggatgagaagtggtcacccaagttcactgtgattgttgctcaaa 488
||||||| |||||||| ||||| | |||| || ||||| || ||||| ||||| || |
Sbjct: 12768 aggcatgcaagtttcttgatgatacgtggcatccgaagtttacagtgatagttgcccaga 12709
Query: 489 agaaccaccacaccaagttctt 510
||||||||||||| ||||||||
Sbjct: 12708 agaaccaccacacaaagttctt 12687
Score = 40.1 bits (20), Expect = 0.51
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtgaaagtcagtttacccaggtcatcaacattgagctggatcagat 423
||||||||| ||||||||| |||||||| ||| || | || ||||| |||||||||||
Sbjct: 69133 cagggatggtgtcagtgaatctcagtttaaccaagttcttaatattgaactggatcagat 69192
Score = 38.2 bits (19), Expect = 2.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 341 aaaccagaacacataattattttcagg 367
|||||||| ||||| ||||||||||||
Sbjct: 13048 aaaccagagcacatcattattttcagg 13022
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete
sequence
Length = 112600
Score = 52.0 bits (26), Expect = 1e-004
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 429 aggcatgtaagtttctggatgagaagtggtcacccaagttcactgtgattgttgctcaaa 488
||||||| |||||||| ||||| | |||| || ||||| || ||||| ||||| || |
Sbjct: 77683 aggcatgcaagtttcttgatgatacgtggcatccgaagtttacagtgatagttgcccaga 77624
Query: 489 agaaccaccacaccaagttctt 510
||||||||||||| ||||||||
Sbjct: 77623 agaaccaccacacaaagttctt 77602
Score = 38.2 bits (19), Expect = 2.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 341 aaaccagaacacataattattttcagg 367
|||||||| ||||| ||||||||||||
Sbjct: 77963 aaaccagagcacatcattattttcagg 77937
>ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 mRNA, complete cds
Length = 2553
Score = 52.0 bits (26), Expect = 1e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 350 cacataattattttcagggatggagtcagtgaaagtcagtttacccaggtcatcaacatt 409
||||| || |||||||||||||| ||||||||| |||||||| ||| || | || |||
Sbjct: 2041 cacattatcattttcagggatggtgtcagtgaatctcagtttaaccaagttcttaatatt 2100
Query: 410 gagctggatcagat 423
|| |||||||||||
Sbjct: 2101 gaactggatcagat 2114
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 52.0 bits (26), Expect = 1e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 429 aggcatgtaagtttctggatgagaagtggtcacccaagttcactgtgattgttgctcaaa 488
||||||| |||||||| ||||| | |||| || ||||| || ||||| ||||| || |
Sbjct: 7197256 aggcatgcaagtttcttgatgatacgtggcatccgaagtttacagtgatagttgcccaga 7197315
Query: 489 agaaccaccacaccaagttctt 510
||||||||||||| ||||||||
Sbjct: 7197316 agaaccaccacacaaagttctt 7197337
Score = 40.1 bits (20), Expect = 0.51
Identities = 50/60 (83%)
Strand = Plus / Minus
Query: 364 cagggatggagtcagtgaaagtcagtttacccaggtcatcaacattgagctggatcagat 423
||||||||| ||||||||| |||||||| ||| || | || ||||| |||||||||||
Sbjct: 7140891 cagggatggtgtcagtgaatctcagtttaaccaagttcttaatattgaactggatcagat 7140832
Score = 40.1 bits (20), Expect = 0.51
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 437 aagtttctggatgagaagtg 456
||||||||||||||||||||
Sbjct: 1645373 aagtttctggatgagaagtg 1645392
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 11931313 ggttagttctcgtcaatgg 11931295
Score = 38.2 bits (19), Expect = 2.0
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 341 aaaccagaacacataattattttcagg 367
|||||||| ||||| ||||||||||||
Sbjct: 7196976 aaaccagagcacatcattattttcagg 7197002
>gb|BE525238.1|BE525238 M60B11STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M60B11 5', mRNA sequence
Length = 366
Score = 44.1 bits (22), Expect = 0.033
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactc 54
||||||| |||||||||||||| || ||||||||
Sbjct: 102 tgaagattaatgcaaagcttggaggcctgaactc 135
>gb|BE529725.1|BE529725 M75O17STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600038972R1 5', mRNA sequence
Length = 260
Score = 44.1 bits (22), Expect = 0.033
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactc 54
||||||| |||||||||||||| || ||||||||
Sbjct: 197 tgaagattaatgcaaagcttggaggcctgaactc 230
>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
mRNA, complete cds
Length = 3171
Score = 44.1 bits (22), Expect = 0.033
Identities = 76/94 (80%)
Strand = Plus / Plus
Query: 339 gaaaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccagg 398
|||||||||| || || || |||||||||||||| || |||||| ||| || | ||||
Sbjct: 2325 gaaaaccagagcatatcataattttcagggatggtgtgagtgaatctcaattcaatcagg 2384
Query: 399 tcatcaacattgagctggatcagatcatcgaggc 432
| | || ||||| || |||||||||||||||||
Sbjct: 2385 ttctgaatattgaacttgatcagatcatcgaggc 2418
Score = 44.1 bits (22), Expect = 0.033
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactc 54
||||||| |||||||||||||| || ||||||||
Sbjct: 2004 tgaagattaatgcaaagcttggaggcctgaactc 2037
>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
mRNA, complete cds
Length = 2806
Score = 44.1 bits (22), Expect = 0.033
Identities = 76/94 (80%)
Strand = Plus / Plus
Query: 339 gaaaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccagg 398
|||||||||| || || || |||||||||||||| || |||||| ||| || | ||||
Sbjct: 2195 gaaaaccagagcatatcataattttcagggatggtgtgagtgaatctcaattcaatcagg 2254
Query: 399 tcatcaacattgagctggatcagatcatcgaggc 432
| | || ||||| || |||||||||||||||||
Sbjct: 2255 ttctgaatattgaacttgatcagatcatcgaggc 2288
Score = 44.1 bits (22), Expect = 0.033
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactc 54
||||||| |||||||||||||| || ||||||||
Sbjct: 1874 tgaagattaatgcaaagcttggaggcctgaactc 1907
>emb|AX505699.1| Sequence 394 from Patent WO0216655
Length = 2793
Score = 44.1 bits (22), Expect = 0.033
Identities = 76/94 (80%)
Strand = Plus / Plus
Query: 339 gaaaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccagg 398
|||||||||| || || || |||||||||||||| || |||||| ||| || | ||||
Sbjct: 2213 gaaaaccagagcatatcataattttcagggatggtgtgagtgaatctcaattcaatcagg 2272
Query: 399 tcatcaacattgagctggatcagatcatcgaggc 432
| | || ||||| || |||||||||||||||||
Sbjct: 2273 ttctgaatattgaacttgatcagatcatcgaggc 2306
Score = 44.1 bits (22), Expect = 0.033
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactc 54
||||||| |||||||||||||| || ||||||||
Sbjct: 1892 tgaagattaatgcaaagcttggaggcctgaactc 1925
>gb|AC007660.2|AC007660 Arabidopsis thaliana chromosome II section 220 of 255 of the complete
sequence. Sequence from clones T2P4, T7D17, T20B5
Length = 72808
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttggt 43
||||||||||||||||||||||
Sbjct: 54338 gaagatcaatgcaaagcttggt 54359
>emb|BX820029.1|CNS0A8FQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS65ZB10 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1439
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttggt 43
||||||||||||||||||||||
Sbjct: 1354 gaagatcaatgcaaagcttggt 1375
>emb|BX819012.1|CNS0A8VW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB37ZE05 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1494
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttggt 43
||||||||||||||||||||||
Sbjct: 1389 gaagatcaatgcaaagcttggt 1410
>emb|BX819256.1|CNS0A8XD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB60ZD06 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1483
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttggt 43
||||||||||||||||||||||
Sbjct: 1394 gaagatcaatgcaaagcttggt 1415
>emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS63ZA02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 838
Score = 44.1 bits (22), Expect = 0.033
Identities = 76/94 (80%)
Strand = Plus / Plus
Query: 339 gaaaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccagg 398
|||||||||| || || || |||||||||||||| || |||||| ||| || | ||||
Sbjct: 39 gaaaaccagagcatatcataattttcagggatggtgtgagtgaatctcaattcaatcagg 98
Query: 399 tcatcaacattgagctggatcagatcatcgaggc 432
| | || ||||| || |||||||||||||||||
Sbjct: 99 ttctgaatattgaacttgatcagatcatcgaggc 132
>dbj|AK222157.1| Arabidopsis thaliana mRNA for rhodanese like protein, complete cds,
clone: RAFL23-13-J22
Length = 1515
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttggt 43
||||||||||||||||||||||
Sbjct: 1373 gaagatcaatgcaaagcttggt 1394
>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA,
complete cds
Length = 3166
Score = 44.1 bits (22), Expect = 0.033
Identities = 76/94 (80%)
Strand = Plus / Plus
Query: 339 gaaaaccagaacacataattattttcagggatggagtcagtgaaagtcagtttacccagg 398
|||||||||| || || || |||||||||||||| || |||||| ||| || | ||||
Sbjct: 2325 gaaaaccagagcatatcataattttcagggatggtgtgagtgaatctcaattcaatcagg 2384
Query: 399 tcatcaacattgagctggatcagatcatcgaggc 432
| | || ||||| || |||||||||||||||||
Sbjct: 2385 ttctgaatattgaacttgatcagatcatcgaggc 2418
Score = 44.1 bits (22), Expect = 0.033
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 tgaagatcaatgcaaagcttggtggtctgaactc 54
||||||| |||||||||||||| || ||||||||
Sbjct: 2004 tgaagattaatgcaaagcttggaggcctgaactc 2037
>ref|NM_129638.2| Arabidopsis thaliana unknown protein AT2G40760 mRNA, complete cds
Length = 1492
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttggt 43
||||||||||||||||||||||
Sbjct: 1394 gaagatcaatgcaaagcttggt 1415
>gb|CL476825.1|CL476825 SAIL_260_A03.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_260_A03.v1, DNA sequence
Length = 929
Score = 42.1 bits (21), Expect = 0.13
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 474 tgattgttgctcaaaagaaccaccacaccaagttctt 510
|||| ||||| || |||||||||||||| ||||||||
Sbjct: 100 tgatagttgcccagaagaaccaccacacaaagttctt 136
>emb|AX506431.1| Sequence 1126 from Patent WO0216655
Length = 1569
Score = 42.1 bits (21), Expect = 0.13
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttgg 42
|||||||||||||||||||||
Sbjct: 1311 gaagatcaatgcaaagcttgg 1331
>emb|AX651969.1| Sequence 856 from Patent WO03000898
Length = 1569
Score = 42.1 bits (21), Expect = 0.13
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 gaagatcaatgcaaagcttgg 42
|||||||||||||||||||||
Sbjct: 1311 gaagatcaatgcaaagcttgg 1331
>gb|BZ761910.1|BZ761910 SALK_083022.50.80.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_083022.50.80.x,
DNA sequence
Length = 430
Score = 40.1 bits (20), Expect = 0.51
Identities = 50/60 (83%)
Strand = Plus / Minus
Query: 364 cagggatggagtcagtgaaagtcagtttacccaggtcatcaacattgagctggatcagat 423
||||||||| ||||||||| |||||||| ||| || | || ||||| |||||||||||
Sbjct: 387 cagggatggtgtcagtgaatctcagtttaaccaagttgttaatattgaactggatcagat 328
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
Length = 96102
Score = 40.1 bits (20), Expect = 0.51
Identities = 50/60 (83%)
Strand = Plus / Minus
Query: 364 cagggatggagtcagtgaaagtcagtttacccaggtcatcaacattgagctggatcagat 423
||||||||| ||||||||| |||||||| ||| || | || ||||| |||||||||||
Sbjct: 84581 cagggatggtgtcagtgaatctcagtttaaccaagttcttaatattgaactggatcagat 84522
>dbj|AB005241.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOP10
Length = 57892
Score = 40.1 bits (20), Expect = 0.51
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 437 aagtttctggatgagaagtg 456
||||||||||||||||||||
Sbjct: 23987 aagtttctggatgagaagtg 24006
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 40.1 bits (20), Expect = 0.51
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtgaaagtcagtttacccaggtcatcaacattgagctggatcagat 423
||||||||| ||||||||| |||||||| ||| || | || ||||| |||||||||||
Sbjct: 6907273 cagggatggtgtcagtgaatctcagtttaaccaagttcttaatattgaactggatcagat 6907332
Score = 40.1 bits (20), Expect = 0.51
Identities = 50/60 (83%)
Strand = Plus / Minus
Query: 364 cagggatggagtcagtgaaagtcagtttacccaggtcatcaacattgagctggatcagat 423
||||||||| ||||||||| |||||||| ||| || | || ||||| |||||||||||
Sbjct: 6853421 cagggatggtgtcagtgaatctcagtttaaccaagttcttaatattgaactggatcagat 6853362
Score = 40.1 bits (20), Expect = 0.51
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 437 aagtttctggatgagaagtg 456
||||||||||||||||||||
Sbjct: 1554410 aagtttctggatgagaagtg 1554429
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 11091308 ggttagttctcgtcaatgg 11091290
>ref|NM_120638.2| Arabidopsis thaliana APC1; ubiquitin-protein ligase AT5G05560 (APC1)
mRNA, complete cds
Length = 5108
Score = 40.1 bits (20), Expect = 0.51
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 437 aagtttctggatgagaagtg 456
||||||||||||||||||||
Sbjct: 1843 aagtttctggatgagaagtg 1862
>emb|AL085639.1|CNS00QCP Arabidopsis thaliana genome survey sequence T7 end of BAC F11C6 of
IGF library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 265
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 173 ggttagttctcgtcaatgg 155
>gb|BZ377730.1|BZ377730 SALK_106089.15.00.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_106089.15.00.x,
DNA sequence
Length = 266
Score = 38.2 bits (19), Expect = 2.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 341 aaaccagaacacataattattttcagg 367
|||||||| ||||| ||||||||||||
Sbjct: 250 aaaccagagcacatcattattttcagg 224
>gb|BZ378856.1|BZ378856 SALK_112057.47.85.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_112057.47.85.x,
DNA sequence
Length = 399
Score = 38.2 bits (19), Expect = 2.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 341 aaaccagaacacataattattttcagg 367
|||||||| ||||| ||||||||||||
Sbjct: 91 aaaccagagcacatcattattttcagg 65
>gb|BZ378858.1|BZ378858 SALK_112059.54.15.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_112059.54.15.x,
DNA sequence
Length = 423
Score = 38.2 bits (19), Expect = 2.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 341 aaaccagaacacataattattttcagg 367
|||||||| ||||| ||||||||||||
Sbjct: 92 aaaccagagcacatcattattttcagg 66
>gb|BZ379147.1|BZ379147 SALK_112923.34.65.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_112923.34.65.x,
DNA sequence
Length = 395
Score = 38.2 bits (19), Expect = 2.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 341 aaaccagaacacataattattttcagg 367
|||||||| ||||| ||||||||||||
Sbjct: 65 aaaccagagcacatcattattttcagg 39
>gb|BZ661709.1|BZ661709 SALK_025183.55.25.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_025183.55.25.x,
DNA sequence
Length = 455
Score = 38.2 bits (19), Expect = 2.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 341 aaaccagaacacataattattttcagg 367
|||||||| ||||| ||||||||||||
Sbjct: 45 aaaccagagcacatcattattttcagg 19
>gb|AF296827.1|F13C19 Arabidopsis thaliana BAC F13C19
Length = 85943
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 74488 ggttagttctcgtcaatgg 74470
>emb|AX059513.1| Sequence 246 from Patent WO0055325
Length = 48128
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 1801 ggttagttctcgtcaatgg 1783
>gb|AC006217.4| Arabidopsis thaliana chromosome 2 clone T13E11 map mi310, complete
sequence
Length = 95959
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 84510 ggttagttctcgtcaatgg 84492
>dbj|AB046429.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F26M13
Length = 97695
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 96742 ggttagttctcgtcaatgg 96724
>dbj|AB046430.1| Arabidopsis thaliana DNA, chromosome 5 centromere region,
clone:F06O24
Length = 58411
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 175 ggttagttctcgtcaatgg 193
|||||||||||||||||||
Sbjct: 6194 ggttagttctcgtcaatgg 6176
>ref|NM_114773.3| Arabidopsis thaliana unknown protein AT3G49140 mRNA, complete cds
Length = 3773
Score = 38.2 bits (19), Expect = 2.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 348 aacacataattattttcag 366
|||||||||||||||||||
Sbjct: 2657 aacacataattattttcag 2639
>gb|B96649.1|B96649 T30P20TR TAMU Arabidopsis thaliana genomic clone T30P20, DNA
sequence
Length = 436
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 309 cagggatggagtcagtga 292
>gb|CL491979.1|CL491979 SAIL_562_E07.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_562_E07.v1, DNA sequence
Length = 968
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 588 tctacatgtgtgcacatg 605
||||||||||||||||||
Sbjct: 919 tctacatgtgtgcacatg 902
>gb|AI993691.1|AI993691 701497176 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701497176, mRNA sequence
Length = 481
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 311 cagggatggagtcagtga 328
>gb|BE523184.1|BE523184 M35A4STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M35A4 5', mRNA sequence
Length = 394
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 33 cagggatggagtcagtga 50
>gb|CD531517.1|CD531517 11B14 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 593
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 237 ttgctgataaagatcaatgcaa 216
>gb|CD532317.1|CD532317 26K18 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 420
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 238 ttgctgataaagatcaatgcaa 217
>gb|CD534604.1|CD534604 40D20 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 525
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 390 ttgctgataaagatcaatgcaa 369
>gb|BX836647.1|BX836647 BX836647 Arabidopsis thaliana Flowers and buds Col-0 Arabidopsis
thaliana cDNA clone GSLTFB75ZH02 3PRIM, mRNA sequence
Length = 922
Score = 36.2 bits (18), Expect = 8.0
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 407 attgagctggatcagatcatcgaggc 432
||||| || |||||||||||||||||
Sbjct: 721 attgaacttgatcagatcatcgaggc 696
>gb|AV442417.1|AV442417 AV442417 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ31g03_r 5', mRNA
sequence
Length = 393
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 305 cagggatggagtcagtga 322
>gb|CK119358.1|CK119358 212p13.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011P13212
5-PRIME, mRNA sequence
Length = 775
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 14 cagggatggagtcagtga 31
>gb|CK121100.1|CK121100 204j21.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J21204
5-PRIME, mRNA sequence
Length = 777
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 506 cagggatggagtcagtga 523
>emb|X97485.1|ATORF03 A.thaliana mRNA for unknown protein, ORF03
Length = 1264
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 757 ttgctgataaagatcaatgcaa 736
>gb|U91995.1|ATU91995 Arabidopsis thaliana Argonaute protein (AGO1) mRNA, complete cds
Length = 3473
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 2658 cagggatggagtcagtga 2675
>gb|AY140071.1| Arabidopsis thaliana unknown protein (At3g26580) mRNA, complete cds
Length = 1289
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 753 ttgctgataaagatcaatgcaa 732
>gb|AY080690.1| Arabidopsis thaliana At1g48410 mRNA sequence
Length = 2764
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 1930 cagggatggagtcagtga 1947
>gb|BT000941.1| Arabidopsis thaliana clone C105223 putative leaf development protein
Argonaute (At1g48410) mRNA, complete cds
Length = 3177
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 2532 cagggatggagtcagtga 2549
>gb|BT003411.1| Arabidopsis thaliana unknown protein (At3g26580) mRNA, complete cds
Length = 1177
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 711 ttgctgataaagatcaatgcaa 690
>gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana BAC T1N15 from chromosome
I, complete sequence
Length = 95295
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 2254 cagggatggagtcagtga 2237
>gb|AC007932.3|F11A17 Arabidopsis thaliana chromosome 1 BAC F11A17 sequence, complete
sequence
Length = 102078
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 16702 cagggatggagtcagtga 16719
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
sequence
Length = 104009
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 606 ctgggatgattggaacaa 623
||||||||||||||||||
Sbjct: 13660 ctgggatgattggaacaa 13677
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete
sequence
Length = 102585
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 606 ctgggatgattggaacaa 623
||||||||||||||||||
Sbjct: 95862 ctgggatgattggaacaa 95879
>emb|BX815116.1|CNS0AAU5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS34ZG07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 3188
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 2407 cagggatggagtcagtga 2424
>dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFE16
Length = 82646
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 52521 ttgctgataaagatcaatgcaa 52500
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 9697437 ttgctgataaagatcaatgcaa 9697416
>emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence
Length = 81493
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 12051 ttgctgataaagatcaatgcaa 12030
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 2246624 cagggatggagtcagtga 2246607
>tpg|BK001470.1| TPA: Arabidopsis thaliana callose synthase (LAP1) mRNA, complete cds
Length = 5772
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 606 ctgggatgattggaacaa 623
||||||||||||||||||
Sbjct: 5073 ctgggatgattggaacaa 5090
>gb|AY337762.1| Arabidopsis thaliana LAP1 (At2g13680) mRNA, complete cds
Length = 5950
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 606 ctgggatgattggaacaa 623
||||||||||||||||||
Sbjct: 5226 ctgggatgattggaacaa 5243
>ref|NM_113566.2| Arabidopsis thaliana unknown protein AT3G26580 mRNA, complete cds
Length = 1294
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 757 ttgctgataaagatcaatgcaa 736
>ref|NM_103737.2| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.1 mRNA, complete cds
Length = 3483
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 2681 cagggatggagtcagtga 2698
>ref|NM_179453.1| Arabidopsis thaliana AGO1 (ARGONAUTE 1) AT1G48410 (AGO1) transcript
variant AT1G48410.2 mRNA, complete cds
Length = 3489
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 2687 cagggatggagtcagtga 2704
>ref|NM_179622.2| Arabidopsis thaliana 1,3-beta-glucan synthase AT2G13680 mRNA,
complete cds
Length = 5772
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 606 ctgggatgattggaacaa 623
||||||||||||||||||
Sbjct: 5073 ctgggatgattggaacaa 5090
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 36.2 bits (18), Expect = 8.0
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 14 ttgctgatgaagatcaatgcaa 35
|||||||| |||||||||||||
Sbjct: 9761164 ttgctgataaagatcaatgcaa 9761143
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 36.2 bits (18), Expect = 8.0
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 364 cagggatggagtcagtga 381
||||||||||||||||||
Sbjct: 17891030 cagggatggagtcagtga 17891013
Database: At_nucl_with_EST.fasta
Posted date: May 2, 2006 2:53 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 373,953
Number of Sequences: 1013581
Number of extensions: 373953
Number of successful extensions: 24429
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22293
Number of HSP's gapped (non-prelim): 2136
length of query: 715
length of database: 908,940,872
effective HSP length: 20
effective length of query: 695
effective length of database: 888,669,252
effective search space: 617625130140
effective search space used: 617625130140
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)