BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.472
(1282 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV827616.1|AV827616 AV827616 RAFL9 Arabidopsis thaliana ... 78 4e-012
gb|CF652341.1|CF652341 49-L020523-066-003-A13-SP6P MPIZ-ADI... 78 4e-012
gb|AF412085.1|AF412085 Arabidopsis thaliana AT4g01100/F2N1_... 78 4e-012
gb|AF360168.1| Arabidopsis thaliana putative carrier protei... 78 4e-012
gb|AY056343.1| Arabidopsis thaliana putative carrier protei... 78 4e-012
ref|NM_116340.2| Arabidopsis thaliana binding / transporter... 78 4e-012
gb|AV522150.1|AV522150 AV522150 Arabidopsis thaliana aboveg... 70 1e-009
gb|AV522448.1|AV522448 AV522448 Arabidopsis thaliana aboveg... 70 1e-009
gb|AV540687.1|AV540687 AV540687 Arabidopsis thaliana roots ... 70 1e-009
gb|CB252364.1|CB252364 28-E010699-019-002-H08-T7R MPIZ-ADIS... 70 1e-009
gb|BP784221.1|BP784221 BP784221 RAFL7 Arabidopsis thaliana ... 68 4e-009
gb|BP790204.1|BP790204 BP790204 RAFL7 Arabidopsis thaliana ... 68 4e-009
gb|AI995038.1|AI995038 701501561 A. thaliana, Ohio State cl... 62 3e-007
gb|AV522603.1|AV522603 AV522603 Arabidopsis thaliana aboveg... 62 3e-007
gb|BP585380.1|BP585380 BP585380 RAFL15 Arabidopsis thaliana... 60 1e-006
gb|BP616388.1|BP616388 BP616388 RAFL16 Arabidopsis thaliana... 60 1e-006
gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01 60 1e-006
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 60 1e-006
emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome... 60 1e-006
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 60 1e-006
gb|AI995024.1|AI995024 701501516 A. thaliana, Ohio State cl... 54 6e-005
gb|AV793966.1|AV793966 AV793966 RAFL8 Arabidopsis thaliana ... 54 6e-005
gb|AV798786.1|AV798786 AV798786 RAFL9 Arabidopsis thaliana ... 54 6e-005
gb|BP595842.1|BP595842 BP595842 RAFL15 Arabidopsis thaliana... 54 6e-005
gb|AV818278.1|AV818278 AV818278 RAFL9 Arabidopsis thaliana ... 52 2e-004
gb|CA781665.1|CA781665 005A05AF Infected Arabidopsis Leaf A... 52 2e-004
gb|CD533878.1|CD533878 34D9 Arabidopsis Leaf Senescence Lib... 52 2e-004
gb|BP588055.1|BP588055 BP588055 RAFL15 Arabidopsis thaliana... 52 2e-004
gb|BP592775.1|BP592775 BP592775 RAFL15 Arabidopsis thaliana... 52 2e-004
gb|BP639861.1|BP639861 BP639861 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|BP651733.1|BP651733 BP651733 RAFL19 Arabidopsis thaliana... 52 2e-004
gb|H37480.1|H37480 15609 Lambda-PRL2 Arabidopsis thaliana c... 50 0.001
gb|AV793298.1|AV793298 AV793298 RAFL7 Arabidopsis thaliana ... 50 0.001
gb|AV794003.1|AV794003 AV794003 RAFL8 Arabidopsis thaliana ... 50 0.001
gb|AV794989.1|AV794989 AV794989 RAFL8 Arabidopsis thaliana ... 50 0.001
gb|AV820731.1|AV820731 AV820731 RAFL11 Arabidopsis thaliana... 50 0.001
gb|CA781387.1|CA781387 016F08AF Infected Arabidopsis Leaf A... 50 0.001
gb|BP574470.1|BP574470 BP574470 RAFL14 Arabidopsis thaliana... 50 0.001
gb|BP597656.1|BP597656 BP597656 RAFL15 Arabidopsis thaliana... 50 0.001
gb|BP603166.1|BP603166 BP603166 RAFL16 Arabidopsis thaliana... 50 0.001
gb|BP612494.1|BP612494 BP612494 RAFL16 Arabidopsis thaliana... 50 0.001
gb|BP622379.1|BP622379 BP622379 RAFL17 Arabidopsis thaliana... 50 0.001
gb|BP632562.1|BP632562 BP632562 RAFL17 Arabidopsis thaliana... 50 0.001
gb|BP647840.1|BP647840 BP647840 RAFL19 Arabidopsis thaliana... 50 0.001
gb|BP786937.1|BP786937 BP786937 RAFL7 Arabidopsis thaliana ... 50 0.001
ref|NM_116341.2| Arabidopsis thaliana unknown protein AT4G0... 50 0.001
gb|H36980.1|H36980 15109 Lambda-PRL2 Arabidopsis thaliana c... 48 0.004
gb|BE037551.1|BE037551 AA01B01 AA Arabidopsis thaliana cDNA... 48 0.004
gb|BE037596.1|BE037596 AA01F04 AA Arabidopsis thaliana cDNA... 48 0.004
gb|BE037618.1|BE037618 AA01H07 AA Arabidopsis thaliana cDNA... 48 0.004
gb|BE039297.1|BE039297 AC01F12 AC Arabidopsis thaliana cDNA... 48 0.004
gb|BU635065.1|BU635065 015D09 Infected Arabidopsis Leaf Ara... 48 0.004
gb|BU636670.1|BU636670 009H04 Infected Arabidopsis Leaf Ara... 48 0.004
gb|BU636789.1|BU636789 011F06 Infected Arabidopsis Leaf Ara... 48 0.004
gb|BU636798.1|BU636798 011G07 Infected Arabidopsis Leaf Ara... 48 0.004
gb|CA781910.1|CA781910 007D11AF Infected Arabidopsis Leaf A... 48 0.004
gb|CA782053.1|CA782053 011F05AF Infected Arabidopsis Leaf A... 48 0.004
gb|BE037546.1|BE037546 AA01A07 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037552.1|BE037552 AA01B02 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037566.1|BE037566 AA01C08 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037572.1|BE037572 AA01D02 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037573.1|BE037573 AA01D03 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037575.1|BE037575 AA01D05 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037578.1|BE037578 AA01D08 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037583.1|BE037583 AA01E01 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037598.1|BE037598 AA01F08 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037600.1|BE037600 AA01F10 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BE037612.1|BE037612 AA01H01 AA Arabidopsis thaliana cDNA... 46 0.015
gb|BU634552.1|BU634552 005A10 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU634590.1|BU634590 008F04 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU634614.1|BU634614 011B07 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU634627.1|BU634627 011H01 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU634666.1|BU634666 016B03 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU635112.1|BU635112 016A03 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU636222.1|BU636222 005D06 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU636609.1|BU636609 008X27 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU636638.1|BU636638 009D07 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU636778.1|BU636778 011E06 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU636795.1|BU636795 011G03 Infected Arabidopsis Leaf Ara... 46 0.015
gb|BU636825.1|BU636825 012B04 Infected Arabidopsis Leaf Ara... 46 0.015
gb|CA781234.1|CA781234 012D08AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781245.1|CA781245 012F07AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781304.1|CA781304 014H04AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781320.1|CA781320 015B03AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781347.1|CA781347 015E09AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781363.1|CA781363 016A10AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781370.1|CA781370 016C02AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781381.1|CA781381 016E04AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781382.1|CA781382 016E05AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781386.1|CA781386 016F07AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781388.1|CA781388 016F09AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781395.1|CA781395 016H08AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781933.1|CA781933 007H04AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA781934.1|CA781934 007H05AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA782031.1|CA782031 011D03AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA782046.1|CA782046 011E07AF Infected Arabidopsis Leaf A... 46 0.015
gb|CA963952.1|CA963952 cATI007F06AF Infected Arabidopsis Le... 46 0.015
gb|CA963962.1|CA963962 cATI008A02AF Infected Arabidopsis Le... 46 0.015
gb|BP579375.1|BP579375 BP579375 RAFL14 Arabidopsis thaliana... 46 0.015
gb|BP633619.1|BP633619 BP633619 RAFL17 Arabidopsis thaliana... 46 0.015
dbj|BD081662.1| Method and compositions for constructing pl... 46 0.015
gb|Z26575.1|Z26575 ATTS1730 Strasbourg-FA Arabidopsis thali... 44 0.059
gb|Z33849.1|Z33849 ATTS2948 Grenoble-B Arabidopsis thaliana... 44 0.059
gb|Z33850.1|Z33850 ATTS2949 Grenoble-B Arabidopsis thaliana... 44 0.059
gb|Z34698.1|Z34698 ATTS3458 Strasbourg-A Arabidopsis thalia... 44 0.059
gb|Z34712.1|Z34712 ATTS3472 Strasbourg-A Arabidopsis thalia... 44 0.059
gb|BE037540.1|BE037540 AA01A01 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037541.1|BE037541 AA01A02 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037558.1|BE037558 AA01B12 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037559.1|BE037559 AA01C01 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037560.1|BE037560 AA01C02 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037562.1|BE037562 AA01C04 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037563.1|BE037563 AA01C05 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037564.1|BE037564 AA01C06 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037565.1|BE037565 AA01C07 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037567.1|BE037567 AA01C09 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037571.1|BE037571 AA01D01 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037574.1|BE037574 AA01D04 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037576.1|BE037576 AA01D06 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037579.1|BE037579 AA01D09 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037582.1|BE037582 AA01D12 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037584.1|BE037584 AA01E02 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037585.1|BE037585 AA01E04 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037586.1|BE037586 AA01E05 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037587.1|BE037587 AA01E06 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037588.1|BE037588 AA01E08 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037589.1|BE037589 AA01E09 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037590.1|BE037590 AA01E10 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037591.1|BE037591 AA01E11 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037592.1|BE037592 AA01E12 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037593.1|BE037593 AA01F01 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037594.1|BE037594 AA01F02 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037597.1|BE037597 AA01F07 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037599.1|BE037599 AA01F09 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037602.1|BE037602 AA01G02 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037604.1|BE037604 AA01G04 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037605.1|BE037605 AA01G05 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037606.1|BE037606 AA01G06 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037607.1|BE037607 AA01G07 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037608.1|BE037608 AA01G08 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037613.1|BE037613 AA01H02 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037615.1|BE037615 AA01H04 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037616.1|BE037616 AA01H05 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BE037617.1|BE037617 AA01H06 AA Arabidopsis thaliana cDNA... 44 0.059
gb|BU634585.1|BU634585 008B04 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU634615.1|BU634615 011B08 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU634631.1|BU634631 012B05 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU634661.1|BU634661 015D10 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU634671.1|BU634671 016D08 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU634672.1|BU634672 016E02 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU634777.1|BU634777 009D11 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU634910.1|BU634910 012F06 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635022.1|BU635022 014H01 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635060.1|BU635060 015D03 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635062.1|BU635062 015D05 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635071.1|BU635071 015E03 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635111.1|BU635111 016A02 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635117.1|BU635117 016A08 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635147.1|BU635147 016D07 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635150.1|BU635150 016D12 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU635985.1|BU635985 005B06 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636024.1|BU636024 005B08 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636537.1|BU636537 007A05 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636547.1|BU636547 007D02 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636615.1|BU636615 009A06 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636639.1|BU636639 009D08 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636654.1|BU636654 009F07 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636738.1|BU636738 011A08 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636756.1|BU636756 011C06 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636765.1|BU636765 011D06 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636793.1|BU636793 011G01 Infected Arabidopsis Leaf Ara... 44 0.059
gb|BU636824.1|BU636824 012B03 Infected Arabidopsis Leaf Ara... 44 0.059
gb|CA781283.1|CA781283 014D08AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781362.1|CA781362 016A07AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781365.1|CA781365 016B02AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781375.1|CA781375 016D02AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781664.1|CA781664 005A03AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781667.1|CA781667 005A08AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781835.1|CA781835 005F07AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781889.1|CA781889 007A11AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781900.1|CA781900 007C07AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781914.1|CA781914 007E03AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781920.1|CA781920 007F03AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781943.1|CA781943 008A06AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781958.1|CA781958 008C03AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781963.1|CA781963 008C08AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781974.1|CA781974 008D10AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781985.1|CA781985 008F11AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA781992.1|CA781992 008G11AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA782028.1|CA782028 011C07AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA782030.1|CA782030 011D01AF Infected Arabidopsis Leaf A... 44 0.059
gb|CA963939.1|CA963939 cATI014H05AF Infected Arabidopsis Le... 44 0.059
gb|CA963949.1|CA963949 cATI007E02AF Infected Arabidopsis Le... 44 0.059
gb|CA963954.1|CA963954 cATI007F10AF Infected Arabidopsis Le... 44 0.059
gb|CA963956.1|CA963956 cATI007G12AF Infected Arabidopsis Le... 44 0.059
gb|CB035499.1|CB035499 cATI005D05AF1 Infected Arabidopsis L... 44 0.059
gb|CB035508.1|CB035508 cATI015F04AF1 Infected Arabidopsis L... 44 0.059
gb|AV542148.1|AV542148 AV542148 Arabidopsis thaliana roots ... 44 0.059
gb|BP578067.1|BP578067 BP578067 RAFL14 Arabidopsis thaliana... 44 0.059
gb|BP650336.1|BP650336 BP650336 RAFL19 Arabidopsis thaliana... 44 0.059
emb|Z31401.1|ATCYC2B A.thaliana (Columbia) cyc2b mRAN for c... 44 0.059
emb|X86765.1|ATC24RPL2 A.thaliana mRNA for ribosomal protei... 44 0.059
gb|BE037554.1|BE037554 AA01B07 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037555.1|BE037555 AA01B09 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037556.1|BE037556 AA01B10 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037557.1|BE037557 AA01B11 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037561.1|BE037561 AA01C03 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037568.1|BE037568 AA01C10 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037570.1|BE037570 AA01C12 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037609.1|BE037609 AA01G09 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037611.1|BE037611 AA01G12 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037614.1|BE037614 AA01H03 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037620.1|BE037620 AA01H09 AA Arabidopsis thaliana cDNA... 42 0.23
gb|BE037621.1|BE037621 AA01H11 AA Arabidopsis thaliana cDNA... 42 0.23
gb|AV794580.1|AV794580 AV794580 RAFL8 Arabidopsis thaliana ... 42 0.23
gb|BU635142.1|BU635142 016D01 Infected Arabidopsis Leaf Ara... 42 0.23
gb|CA782016.1|CA782016 011B02AF Infected Arabidopsis Leaf A... 42 0.23
gb|CA963976.1|CA963976 cATI008E01AF Infected Arabidopsis Le... 42 0.23
gb|BP669273.1|BP669273 BP669273 RAFL21 Arabidopsis thaliana... 42 0.23
>gb|AV827616.1|AV827616 AV827616 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-17-I17 5', mRNA
sequence
Length = 640
Score = 77.8 bits (39), Expect = 4e-012
Identities = 201/255 (78%)
Strand = Plus / Minus
Query: 987 tttgacgcctgctcgtagctaaaaaacttcacggcagaatttggaacaatccttgcacaa 1046
||||| || ||||| ||||| ||||| || || || ||||| |||||||| | |||||
Sbjct: 621 tttgaagcttgctcatagctgaaaaatttaacagccgaattaggaacaatacgagcacag 562
Query: 1047 ttggtaccattgcccttgaaaagtccacggaggccctctgttctccagatatacttgaga 1106
||||| ||||| || ||||| |||||||| || ||||| |||||||| |||| ||| |
Sbjct: 561 ttggtgccatttcctttgaacagtccacgaagtccctcggttctccaaatatgcttcaat 502
Query: 1107 ccctgaacagtaccattgtacttgatgctgtgcggattttgaacctgaagcaatattttc 1166
|| || || || ||| ||||||| || | ||||||||||| |||||||| ||||| |||
Sbjct: 501 ccttggactgtcccactgtactttatattatgcggattttggacctgaagtaatatcttc 442
Query: 1167 aatcgttcaagtggagcaacagcagtacgagacactccgcctgctacgccgccggcgacg 1226
| | ||| || || ||||||||||| || |||||||| || || || || ||||| |
Sbjct: 441 atcctttccagaggtgcaacagcagttcgtgacactccaccagcgacaccaccggcaaaa 382
Query: 1227 agcgacttgcagatg 1241
|| ||||||||||||
Sbjct: 381 agagacttgcagatg 367
>gb|CF652341.1|CF652341 49-L020523-066-003-A13-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001A133Q 5-PRIME, mRNA sequence
Length = 912
Score = 77.8 bits (39), Expect = 4e-012
Identities = 201/255 (78%)
Strand = Plus / Minus
Query: 987 tttgacgcctgctcgtagctaaaaaacttcacggcagaatttggaacaatccttgcacaa 1046
||||| || ||||| ||||| ||||| || || || ||||| |||||||| | |||||
Sbjct: 572 tttgaagcttgctcatagctgaaaaatttaacagccgaattaggaacaatacgagcacag 513
Query: 1047 ttggtaccattgcccttgaaaagtccacggaggccctctgttctccagatatacttgaga 1106
||||| ||||| || ||||| |||||||| || ||||| |||||||| |||| ||| |
Sbjct: 512 ttggtgccatttcctttgaacagtccacgaagtccctcggttctccaaatatgcttcaat 453
Query: 1107 ccctgaacagtaccattgtacttgatgctgtgcggattttgaacctgaagcaatattttc 1166
|| || || || ||| ||||||| || | ||||||||||| |||||||| ||||| |||
Sbjct: 452 ccttggactgtcccactgtactttatattatgcggattttggacctgaagtaatatcttc 393
Query: 1167 aatcgttcaagtggagcaacagcagtacgagacactccgcctgctacgccgccggcgacg 1226
| | ||| || || ||||||||||| || |||||||| || || || || ||||| |
Sbjct: 392 atcctttccagaggtgcaacagcagttcgtgacactccaccagcgacaccaccggcaaaa 333
Query: 1227 agcgacttgcagatg 1241
|| ||||||||||||
Sbjct: 332 agagacttgcagatg 318
Score = 63.9 bits (32), Expect = 6e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 834 gtctgaacagtgatccttcccctaaccatatccatcgggtaagtagcagacatagctatg 893
||||| ||||| | |||||| | |||||||||||||||||| || |||||||| |||||
Sbjct: 725 gtctggacagttagccttccacgaaccatatccatcgggtacgttgcagacatggctatt 666
Query: 894 ataccagcacatgctccagctccaaggcgcaagagcggagtaag 937
|| ||||| ||| ||||||||||| || || || ||||||||
Sbjct: 665 atcccagcggttgcaccagctccaagccgtaaaagaggagtaag 622
Score = 46.1 bits (23), Expect = 0.015
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 711 acatatggaacaactccgattacagatggaagcca 745
||||||||||||||||| || || |||||||||||
Sbjct: 848 acatatggaacaactccaatcactgatggaagcca 814
>gb|AF412085.1|AF412085 Arabidopsis thaliana AT4g01100/F2N1_16 mRNA, complete cds
Length = 1639
Score = 77.8 bits (39), Expect = 4e-012
Identities = 201/255 (78%)
Strand = Plus / Minus
Query: 987 tttgacgcctgctcgtagctaaaaaacttcacggcagaatttggaacaatccttgcacaa 1046
||||| || ||||| ||||| ||||| || || || ||||| |||||||| | |||||
Sbjct: 620 tttgaagcttgctcatagctgaaaaatttaacagccgaattaggaacaatacgagcacag 561
Query: 1047 ttggtaccattgcccttgaaaagtccacggaggccctctgttctccagatatacttgaga 1106
||||| ||||| || ||||| |||||||| || ||||| |||||||| |||| ||| |
Sbjct: 560 ttggtgccatttcctttgaacagtccacgaagtccctcggttctccaaatatgcttcaat 501
Query: 1107 ccctgaacagtaccattgtacttgatgctgtgcggattttgaacctgaagcaatattttc 1166
|| || || || ||| ||||||| || | ||||||||||| |||||||| ||||| |||
Sbjct: 500 ccttggactgtcccactgtactttatattatgcggattttggacctgaagtaatatcttc 441
Query: 1167 aatcgttcaagtggagcaacagcagtacgagacactccgcctgctacgccgccggcgacg 1226
| | ||| || || ||||||||||| || |||||||| || || || || ||||| |
Sbjct: 440 atcctttccagaggtgcaacagcagttcgtgacactccaccagcgacaccaccggcaaaa 381
Query: 1227 agcgacttgcagatg 1241
|| ||||||||||||
Sbjct: 380 agagacttgcagatg 366
Score = 69.9 bits (35), Expect = 1e-009
Identities = 140/175 (80%)
Strand = Plus / Minus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 1315 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 1256
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 1255 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 1196
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcgatcatgccattgta 472
| |||| |||||||||||||| || || || |||||||||| ||| ||| ||||
Sbjct: 1195 ctccaaagccttcatgacgaactgtttttctaaatgcatcgaccataccagtgta 1141
Score = 63.9 bits (32), Expect = 6e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 834 gtctgaacagtgatccttcccctaaccatatccatcgggtaagtagcagacatagctatg 893
||||| ||||| | |||||| | |||||||||||||||||| || |||||||| |||||
Sbjct: 773 gtctggacagttagccttccacgaaccatatccatcgggtacgttgcagacatggctatt 714
Query: 894 ataccagcacatgctccagctccaaggcgcaagagcggagtaag 937
|| ||||| ||| ||||||||||| || || || ||||||||
Sbjct: 713 atcccagcggttgcaccagctccaagccgtaaaagaggagtaag 670
Score = 46.1 bits (23), Expect = 0.015
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 711 acatatggaacaactccgattacagatggaagcca 745
||||||||||||||||| || || |||||||||||
Sbjct: 896 acatatggaacaactccaatcactgatggaagcca 862
>gb|AF360168.1| Arabidopsis thaliana putative carrier protein (At4g01100) mRNA,
complete cds
Length = 1648
Score = 77.8 bits (39), Expect = 4e-012
Identities = 201/255 (78%)
Strand = Plus / Minus
Query: 987 tttgacgcctgctcgtagctaaaaaacttcacggcagaatttggaacaatccttgcacaa 1046
||||| || ||||| ||||| ||||| || || || ||||| |||||||| | |||||
Sbjct: 619 tttgaagcttgctcatagctgaaaaatttaacagccgaattaggaacaatacgagcacag 560
Query: 1047 ttggtaccattgcccttgaaaagtccacggaggccctctgttctccagatatacttgaga 1106
||||| ||||| || ||||| |||||||| || ||||| |||||||| |||| ||| |
Sbjct: 559 ttggtgccatttcctttgaacagtccacgaagtccctcggttctccaaatatgcttcaat 500
Query: 1107 ccctgaacagtaccattgtacttgatgctgtgcggattttgaacctgaagcaatattttc 1166
|| || || || ||| ||||||| || | ||||||||||| |||||||| ||||| |||
Sbjct: 499 ccttggactgtcccactgtactttatattatgcggattttggacctgaagtaatatcttc 440
Query: 1167 aatcgttcaagtggagcaacagcagtacgagacactccgcctgctacgccgccggcgacg 1226
| | ||| || || ||||||||||| || |||||||| || || || || ||||| |
Sbjct: 439 atcctttccagaggtgcaacagcagttcgtgacactccaccagcgacaccaccggcaaaa 380
Query: 1227 agcgacttgcagatg 1241
|| ||||||||||||
Sbjct: 379 agagacttgcagatg 365
Score = 69.9 bits (35), Expect = 1e-009
Identities = 140/175 (80%)
Strand = Plus / Minus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 1314 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 1255
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 1254 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 1195
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcgatcatgccattgta 472
| |||| |||||||||||||| || || || |||||||||| ||| ||| ||||
Sbjct: 1194 ctccaaagccttcatgacgaactgtttttctaaatgcatcgaccataccagtgta 1140
Score = 63.9 bits (32), Expect = 6e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 834 gtctgaacagtgatccttcccctaaccatatccatcgggtaagtagcagacatagctatg 893
||||| ||||| | |||||| | |||||||||||||||||| || |||||||| |||||
Sbjct: 772 gtctggacagttagccttccacgaaccatatccatcgggtacgttgcagacatggctatt 713
Query: 894 ataccagcacatgctccagctccaaggcgcaagagcggagtaag 937
|| ||||| ||| ||||||||||| || || || ||||||||
Sbjct: 712 atcccagcggttgcaccagctccaagccgtaaaagaggagtaag 669
Score = 46.1 bits (23), Expect = 0.015
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 711 acatatggaacaactccgattacagatggaagcca 745
||||||||||||||||| || || |||||||||||
Sbjct: 895 acatatggaacaactccaatcactgatggaagcca 861
>gb|AY056343.1| Arabidopsis thaliana putative carrier protein (At4g01100) mRNA,
complete cds
Length = 1090
Score = 77.8 bits (39), Expect = 4e-012
Identities = 201/255 (78%)
Strand = Plus / Minus
Query: 987 tttgacgcctgctcgtagctaaaaaacttcacggcagaatttggaacaatccttgcacaa 1046
||||| || ||||| ||||| ||||| || || || ||||| |||||||| | |||||
Sbjct: 365 tttgaagcttgctcatagctgaaaaatttaacagccgaattaggaacaatacgagcacag 306
Query: 1047 ttggtaccattgcccttgaaaagtccacggaggccctctgttctccagatatacttgaga 1106
||||| ||||| || ||||| |||||||| || ||||| |||||||| |||| ||| |
Sbjct: 305 ttggtgccatttcctttgaacagtccacgaagtccctcggttctccaaatatgcttcaat 246
Query: 1107 ccctgaacagtaccattgtacttgatgctgtgcggattttgaacctgaagcaatattttc 1166
|| || || || ||| ||||||| || | ||||||||||| |||||||| ||||| |||
Sbjct: 245 ccttggactgtcccactgtactttatattatgcggattttggacctgaagtaatatcttc 186
Query: 1167 aatcgttcaagtggagcaacagcagtacgagacactccgcctgctacgccgccggcgacg 1226
| | ||| || || ||||||||||| || |||||||| || || || || ||||| |
Sbjct: 185 atcctttccagaggtgcaacagcagttcgtgacactccaccagcgacaccaccggcaaaa 126
Query: 1227 agcgacttgcagatg 1241
|| ||||||||||||
Sbjct: 125 agagacttgcagatg 111
Score = 69.9 bits (35), Expect = 1e-009
Identities = 140/175 (80%)
Strand = Plus / Minus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 1060 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 1001
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 1000 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 941
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcgatcatgccattgta 472
| |||| |||||||||||||| || || || |||||||||| ||| ||| ||||
Sbjct: 940 ctccaaagccttcatgacgaactgtttttctaaatgcatcgaccataccagtgta 886
Score = 63.9 bits (32), Expect = 6e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 834 gtctgaacagtgatccttcccctaaccatatccatcgggtaagtagcagacatagctatg 893
||||| ||||| | |||||| | |||||||||||||||||| || |||||||| |||||
Sbjct: 518 gtctggacagttagccttccacgaaccatatccatcgggtacgttgcagacatggctatt 459
Query: 894 ataccagcacatgctccagctccaaggcgcaagagcggagtaag 937
|| ||||| ||| ||||||||||| || || || ||||||||
Sbjct: 458 atcccagcggttgcaccagctccaagccgtaaaagaggagtaag 415
Score = 46.1 bits (23), Expect = 0.015
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 711 acatatggaacaactccgattacagatggaagcca 745
||||||||||||||||| || || |||||||||||
Sbjct: 641 acatatggaacaactccaatcactgatggaagcca 607
>ref|NM_116340.2| Arabidopsis thaliana binding / transporter AT4G01100 mRNA, complete
cds
Length = 1660
Score = 77.8 bits (39), Expect = 4e-012
Identities = 201/255 (78%)
Strand = Plus / Minus
Query: 987 tttgacgcctgctcgtagctaaaaaacttcacggcagaatttggaacaatccttgcacaa 1046
||||| || ||||| ||||| ||||| || || || ||||| |||||||| | |||||
Sbjct: 621 tttgaagcttgctcatagctgaaaaatttaacagccgaattaggaacaatacgagcacag 562
Query: 1047 ttggtaccattgcccttgaaaagtccacggaggccctctgttctccagatatacttgaga 1106
||||| ||||| || ||||| |||||||| || ||||| |||||||| |||| ||| |
Sbjct: 561 ttggtgccatttcctttgaacagtccacgaagtccctcggttctccaaatatgcttcaat 502
Query: 1107 ccctgaacagtaccattgtacttgatgctgtgcggattttgaacctgaagcaatattttc 1166
|| || || || ||| ||||||| || | ||||||||||| |||||||| ||||| |||
Sbjct: 501 ccttggactgtcccactgtactttatattatgcggattttggacctgaagtaatatcttc 442
Query: 1167 aatcgttcaagtggagcaacagcagtacgagacactccgcctgctacgccgccggcgacg 1226
| | ||| || || ||||||||||| || |||||||| || || || || ||||| |
Sbjct: 441 atcctttccagaggtgcaacagcagttcgtgacactccaccagcgacaccaccggcaaaa 382
Query: 1227 agcgacttgcagatg 1241
|| ||||||||||||
Sbjct: 381 agagacttgcagatg 367
Score = 69.9 bits (35), Expect = 1e-009
Identities = 140/175 (80%)
Strand = Plus / Minus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 1316 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 1257
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 1256 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 1197
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcgatcatgccattgta 472
| |||| |||||||||||||| || || || |||||||||| ||| ||| ||||
Sbjct: 1196 ctccaaagccttcatgacgaactgtttttctaaatgcatcgaccataccagtgta 1142
Score = 63.9 bits (32), Expect = 6e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 834 gtctgaacagtgatccttcccctaaccatatccatcgggtaagtagcagacatagctatg 893
||||| ||||| | |||||| | |||||||||||||||||| || |||||||| |||||
Sbjct: 774 gtctggacagttagccttccacgaaccatatccatcgggtacgttgcagacatggctatt 715
Query: 894 ataccagcacatgctccagctccaaggcgcaagagcggagtaag 937
|| ||||| ||| ||||||||||| || || || ||||||||
Sbjct: 714 atcccagcggttgcaccagctccaagccgtaaaagaggagtaag 671
Score = 46.1 bits (23), Expect = 0.015
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 711 acatatggaacaactccgattacagatggaagcca 745
||||||||||||||||| || || |||||||||||
Sbjct: 897 acatatggaacaactccaatcactgatggaagcca 863
>gb|AV522150.1|AV522150 AV522150 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ73f07F 3', mRNA
sequence
Length = 578
Score = 69.9 bits (35), Expect = 1e-009
Identities = 140/175 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 334 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 393
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 394 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 453
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcgatcatgccattgta 472
| |||| |||||||||||||| || || || |||||||||| ||| ||| ||||
Sbjct: 454 ctccaaagccttcatgacgaactgtttttctaaatgcatcgaccataccagtgta 508
>gb|AV522448.1|AV522448 AV522448 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ80c09F 3', mRNA
sequence
Length = 572
Score = 69.9 bits (35), Expect = 1e-009
Identities = 140/175 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 325 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 384
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 385 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 444
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcgatcatgccattgta 472
| |||| |||||||||||||| || || || |||||||||| ||| ||| ||||
Sbjct: 445 ctccaaagccttcatgacgaactgtttttctaaatgcatcgaccataccagtgta 499
>gb|AV540687.1|AV540687 AV540687 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ153g04F 3', mRNA sequence
Length = 579
Score = 69.9 bits (35), Expect = 1e-009
Identities = 140/175 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 310 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 369
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 370 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 429
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcgatcatgccattgta 472
| |||| |||||||||||||| || || || |||||||||| ||| ||| ||||
Sbjct: 430 ctccaaagccttcatgacgaactgtttttctaaatgcatcgaccataccagtgta 484
>gb|CB252364.1|CB252364 28-E010699-019-002-H08-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768H082Q 5-PRIME, mRNA sequence
Length = 595
Score = 69.9 bits (35), Expect = 1e-009
Identities = 193/246 (78%)
Strand = Plus / Minus
Query: 996 tgctcgtagctaaaaaacttcacggcagaatttggaacaatccttgcacaattggtacca 1055
||||| ||||| ||||| || || || ||||| |||||||| | ||||| ||||| |||
Sbjct: 594 tgctcatagctgaaaaatttaacagccgaattaggaacaatacgagcacagttggtgcca 535
Query: 1056 ttgcccttgaaaagtccacggaggccctctgttctccagatatacttgagaccctgaaca 1115
|| || |||| |||||||| || ||||| |||||||| |||| ||| | || || ||
Sbjct: 534 tttcctntgaacagtccacgaagtccctcggttctccaaatatgcttcaatccttggact 475
Query: 1116 gtaccattgtacttgatgctgtgcggattttgaacctgaagcaatattttcaatcgttca 1175
|| ||| ||||||| || | ||||||||||| |||||||| ||||| |||| | |||
Sbjct: 474 gtcccactgtactttatattatgcggattttggacctgaagtaatatcttcatcctttcc 415
Query: 1176 agtggagcaacagcagtacgagacactccgcctgctacgccgccggcgacgagcgacttg 1235
|| || ||||||||||| || |||||||| || || || || ||||| | || ||||||
Sbjct: 414 agaggtgcaacagcagttcgtgacactccaccagcgacaccaccggcaaaaagagacttg 355
Query: 1236 cagatg 1241
||||||
Sbjct: 354 cagatg 349
>gb|BP784221.1|BP784221 BP784221 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-89-O07 3',
mRNA sequence
Length = 407
Score = 67.9 bits (34), Expect = 4e-009
Identities = 130/162 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 244 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 303
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 304 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 363
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcga 459
| |||| |||||||||||||| || || || ||||||||||
Sbjct: 364 ctccaaagccttcatgacgaactgtttttctaaatgcatcga 405
>gb|BP790204.1|BP790204 BP790204 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-42-D15 3',
mRNA sequence
Length = 416
Score = 67.9 bits (34), Expect = 4e-009
Identities = 130/162 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 244 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 303
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 304 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 363
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcatcga 459
| |||| |||||||||||||| || || || ||||||||||
Sbjct: 364 ctccaaagccttcatgacgaactgtttttctaaatgcatcga 405
>gb|AI995038.1|AI995038 701501561 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701501561, mRNA sequence
Length = 519
Score = 61.9 bits (31), Expect = 3e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 834 gtctgaacagtgatccttcccctaaccatatccatcgggtaagtagcagacatagctatg 893
||||| ||||| | |||||| | |||||||||||||||||| || |||||||| |||||
Sbjct: 255 gtctggacagttagccttccacgaaccatatccatcgggtacgttgcagacatggctatt 196
Query: 894 ataccagcacatgctccagctccaaggcgcaagag 928
|| ||||| ||| ||||||||||| || |||||
Sbjct: 195 atcccagcggttgcaccagctccaagccgtaagag 161
>gb|AV522603.1|AV522603 AV522603 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ83e09F 3', mRNA
sequence
Length = 588
Score = 61.9 bits (31), Expect = 3e-007
Identities = 127/159 (79%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 326 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 385
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 386 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 445
Query: 418 caccaactccttcatgacgaacagtcttcctgaatgcat 456
| |||| |||||||||||||| || || || |||||||
Sbjct: 446 ctccaaagccttcatgacgaactgtttttctaaatgcat 484
>gb|BP585380.1|BP585380 BP585380 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-02-F09 3',
mRNA sequence
Length = 457
Score = 60.0 bits (30), Expect = 1e-006
Identities = 114/142 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 300 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 359
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 360 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 419
Query: 418 caccaactccttcatgacgaac 439
| |||| ||||||||||||||
Sbjct: 420 ctccaaagccttcatgacgaac 441
>gb|BP616388.1|BP616388 BP616388 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-19-N11 3',
mRNA sequence
Length = 445
Score = 60.0 bits (30), Expect = 1e-006
Identities = 114/142 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 303 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 362
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgtagagag 417
||||||| ||||| || || || ||||| ||||| || || || | ||||||||| | |
Sbjct: 363 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgtacaatg 422
Query: 418 caccaactccttcatgacgaac 439
| |||| ||||||||||||||
Sbjct: 423 ctccaaagccttcatgacgaac 444
>gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01
Length = 124225
Score = 60.0 bits (30), Expect = 1e-006
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 848 ccttcccctaaccatatccatcgggtaagtagcagacatagctatgataccagcacatgc 907
|||||| | |||||||||||||||||| || |||||||| ||||| || ||||| |||
Sbjct: 95202 ccttccacgaaccatatccatcgggtacgttgcagacatggctattatcccagcggttgc 95261
Query: 908 tccagctccaaggcgcaagagcggagtaag 937
||||||||||| || || || ||||||||
Sbjct: 95262 accagctccaagccgtaaaagaggagtaag 95291
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 94390 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 94449
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 94450 atgcaatcgcaat 94462
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 60.0 bits (30), Expect = 1e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 848 ccttcccctaaccatatccatcgggtaagtagcagacatagctatgataccagcacatgc 907
|||||| | |||||||||||||||||| || |||||||| ||||| || ||||| |||
Sbjct: 477587 ccttccacgaaccatatccatcgggtacgttgcagacatggctattatcccagcggttgc 477528
Query: 908 tccagctccaaggcgcaagagcggagtaag 937
||||||||||| || || || ||||||||
Sbjct: 477527 accagctccaagccgtaaaagaggagtaag 477498
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 478399 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 478340
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 478339 atgcaatcgcaat 478327
>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3
Length = 196149
Score = 60.0 bits (30), Expect = 1e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 848 ccttcccctaaccatatccatcgggtaagtagcagacatagctatgataccagcacatgc 907
|||||| | |||||||||||||||||| || |||||||| ||||| || ||||| |||
Sbjct: 92493 ccttccacgaaccatatccatcgggtacgttgcagacatggctattatcccagcggttgc 92434
Query: 908 tccagctccaaggcgcaagagcggagtaag 937
||||||||||| || || || ||||||||
Sbjct: 92433 accagctccaagccgtaaaagaggagtaag 92404
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 93305 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 93246
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 93245 atgcaatcgcaat 93233
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 60.0 bits (30), Expect = 1e-006
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 848 ccttcccctaaccatatccatcgggtaagtagcagacatagctatgataccagcacatgc 907
|||||| | |||||||||||||||||| || |||||||| ||||| || ||||| |||
Sbjct: 478779 ccttccacgaaccatatccatcgggtacgttgcagacatggctattatcccagcggttgc 478720
Query: 908 tccagctccaaggcgcaagagcggagtaag 937
||||||||||| || || || ||||||||
Sbjct: 478719 accagctccaagccgtaaaagaggagtaag 478690
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 479591 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 479532
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 479531 atgcaatcgcaat 479519
>gb|AI995024.1|AI995024 701501516 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA
clone 701501516, mRNA sequence
Length = 532
Score = 54.0 bits (27), Expect = 6e-005
Identities = 141/179 (78%)
Strand = Plus / Minus
Query: 1063 tgaaaagtccacggaggccctctgttctccagatatacttgagaccctgaacagtaccat 1122
|||| |||||||| || ||||| |||||||| |||| ||| | || || || || |||
Sbjct: 358 tgaacagtccacgaagtccctcggttctccaaatatgcttcaatccttggactgtcccac 299
Query: 1123 tgtacttgatgctgtgcggattttgaacctgaagcaatattttcaatcgttcaagtggag 1182
||||||| || | ||||||||||| |||||||| ||||| |||| | ||| || || |
Sbjct: 298 tgtactttatattatgcggattttggacctgaagtaatatcttcatcctttccagaggtg 239
Query: 1183 caacagcagtacgagacactccgcctgctacgccgccggcgacgagcgacttgcagatg 1241
|||||||||| || |||||||| || || || || ||||| | || ||||||||||||
Sbjct: 238 caacagcagttcgtgacactccaccagcgacaccaccggcaaaaagagacttgcagatg 180
>gb|AV793966.1|AV793966 AV793966 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-11-A08 3',
mRNA sequence
Length = 449
Score = 54.0 bits (27), Expect = 6e-005
Identities = 93/115 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 323 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 382
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgta 412
||||||| ||||| || || || ||||| ||||| || || || | |||||||||
Sbjct: 383 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgta 437
>gb|AV798786.1|AV798786 AV798786 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-17-I17 3',
mRNA sequence
Length = 434
Score = 54.0 bits (27), Expect = 6e-005
Identities = 93/115 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 319 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 378
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgta 412
||||||| ||||| || || || ||||| ||||| || || || | |||||||||
Sbjct: 379 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgta 433
>gb|BP595842.1|BP595842 BP595842 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-31-L12 3',
mRNA sequence
Length = 450
Score = 54.0 bits (27), Expect = 6e-005
Identities = 93/115 (80%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 324 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 383
Query: 358 atgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttgta 412
||||||| ||||| || || || ||||| ||||| || || || | |||||||||
Sbjct: 384 atgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttgta 438
>gb|AV818278.1|AV818278 AV818278 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-97-I12 3',
mRNA sequence
Length = 420
Score = 52.0 bits (26), Expect = 2e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 326 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 385
Query: 358 atgcaatggcaattgagggcaccaccttgactga 391
||||||| ||||| || || || ||||| |||||
Sbjct: 386 atgcaatcgcaatcgatggtacaaccttcactga 419
>gb|CA781665.1|CA781665 005A05AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 541
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1257 ccccctcgtgccgaattcctgcagcc 1282
||||||||||||||||||||||||||
Sbjct: 26 ccccctcgtgccgaattcctgcagcc 1
>gb|CD533878.1|CD533878 34D9 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 360
Score = 52.0 bits (26), Expect = 2e-004
Identities = 98/122 (80%)
Strand = Plus / Minus
Query: 351 gtcacaaatgcaatggcaattgagggcaccaccttgactgagttcggcacaagacccttg 410
|||||||||||||| ||||| || || || ||||| ||||| || || || | |||||||
Sbjct: 239 gtcacaaatgcaatcgcaatcgatggtacaaccttcactgaattggggaccaaacccttg 180
Query: 411 tagagagcaccaactccttcatgacgaacagtcttcctgaatgcatcgatcatgccattg 470
|| | || |||| |||||||||||||| || || || |||||||||| ||| ||| ||
Sbjct: 179 tacaatgctccaaagccttcatgacgaactgtttttctaaatgcatcgaccataccagtg 120
Query: 471 ta 472
||
Sbjct: 119 ta 118
>gb|BP588055.1|BP588055 BP588055 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-44-O12 3',
mRNA sequence
Length = 410
Score = 52.0 bits (26), Expect = 2e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 300 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 359
Query: 358 atgcaatggcaattgagggcaccaccttgactga 391
||||||| ||||| || || || ||||| |||||
Sbjct: 360 atgcaatcgcaatcgatggtacaaccttcactga 393
>gb|BP592775.1|BP592775 BP592775 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-19-I19 3',
mRNA sequence
Length = 431
Score = 52.0 bits (26), Expect = 2e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 325 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 384
Query: 358 atgcaatggcaattgagggcaccaccttgactga 391
||||||| ||||| || || || ||||| |||||
Sbjct: 385 atgcaatcgcaatcgatggtacaaccttcactga 418
>gb|BP639861.1|BP639861 BP639861 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-49-G16 3',
mRNA sequence
Length = 402
Score = 52.0 bits (26), Expect = 2e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 301 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 360
Query: 358 atgcaatggcaattgagggcaccaccttgactga 391
||||||| ||||| || || || ||||| |||||
Sbjct: 361 atgcaatcgcaatcgatggtacaaccttcactga 394
>gb|BP651733.1|BP651733 BP651733 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-90-F05 3',
mRNA sequence
Length = 403
Score = 52.0 bits (26), Expect = 2e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 292 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 351
Query: 358 atgcaatggcaattgagggcaccaccttgactga 391
||||||| ||||| || || || ||||| |||||
Sbjct: 352 atgcaatcgcaatcgatggtacaaccttcactga 385
>gb|H37480.1|H37480 15609 Lambda-PRL2 Arabidopsis thaliana cDNA clone 182C6T7, mRNA
sequence
Length = 542
Score = 50.1 bits (25), Expect = 0.001
Identities = 85/105 (80%)
Strand = Plus / Minus
Query: 1137 tgcggattttgaacctgaagcaatattttcaatcgttcaagtggagcaacagcagtacga 1196
||||||||||| |||||||| ||||| |||| | ||| || || ||||||||||| ||
Sbjct: 284 tgcggattttggacctgaagtaatatcttcatcctttccagaggtgcaacagcagttcgt 225
Query: 1197 gacactccgcctgctacgccgccggcgacgagcgacttgcagatg 1241
|||||||| || || || || ||||| | || ||||||||||||
Sbjct: 224 gacactccaccagcgacaccaccggcaaaaagagacttgcagatg 180
>gb|AV793298.1|AV793298 AV793298 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-18-O04 3',
mRNA sequence
Length = 444
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 346 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 405
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 406 atgcaatcgcaat 418
>gb|AV794003.1|AV794003 AV794003 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-11-C14 3',
mRNA sequence
Length = 435
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 345 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 404
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 405 atgcaatcgcaat 417
>gb|AV794989.1|AV794989 AV794989 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-I03 3',
mRNA sequence
Length = 431
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 344 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 403
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 404 atgcaatcgcaat 416
>gb|AV820731.1|AV820731 AV820731 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-P10 3',
mRNA sequence
Length = 418
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 345 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 404
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 405 atgcaatcgcaat 417
>gb|CA781387.1|CA781387 016F08AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 630
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1258 cccctcgtgccgaattcctgcagcc 1282
|||||||||||||||||||||||||
Sbjct: 30 cccctcgtgccgaattcctgcagcc 6
>gb|BP574470.1|BP574470 BP574470 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-88-D01 3',
mRNA sequence
Length = 423
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 345 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 404
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 405 atgcaatcgcaat 417
>gb|BP597656.1|BP597656 BP597656 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-40-G09 3',
mRNA sequence
Length = 429
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 340 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 399
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 400 atgcaatcgcaat 412
>gb|BP603166.1|BP603166 BP603166 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-57-K19 3',
mRNA sequence
Length = 430
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 324 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 383
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 384 atgcaatcgcaat 396
>gb|BP612494.1|BP612494 BP612494 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-89-L15 3',
mRNA sequence
Length = 429
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 323 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 382
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 383 atgcaatcgcaat 395
>gb|BP622379.1|BP622379 BP622379 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-03-A14 3',
mRNA sequence
Length = 375
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 300 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 359
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 360 atgcaatcgcaat 372
>gb|BP632562.1|BP632562 BP632562 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-27-J07 3',
mRNA sequence
Length = 396
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 299 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 358
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 359 atgcaatcgcaat 371
>gb|BP647840.1|BP647840 BP647840 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-76-L04 3',
mRNA sequence
Length = 415
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 300 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 359
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 360 atgcaatcgcaat 372
>gb|BP786937.1|BP786937 BP786937 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-02-F04 3',
mRNA sequence
Length = 428
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 346 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 405
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 406 atgcaatcgcaat 418
>ref|NM_116341.2| Arabidopsis thaliana unknown protein AT4G01110 mRNA, complete cds
Length = 1565
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 298 ctcagtctgatatcctcatctctactcctagcacatccttcacaacctcgtaagtcacaa 357
|||||||||||||||| | ||| ||||||| || || ||||| | ||| || |||||||
Sbjct: 1475 ctcagtctgatatcctaaactccactcctaaaacgtctttcaccatctcatatgtcacaa 1534
Query: 358 atgcaatggcaat 370
||||||| |||||
Sbjct: 1535 atgcaatcgcaat 1547
>gb|H36980.1|H36980 15109 Lambda-PRL2 Arabidopsis thaliana cDNA clone 181F18T7, mRNA
sequence
Length = 486
Score = 48.1 bits (24), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 834 gtctgaacagtgatccttcccctaaccatatccatcgggtaagtagcagacatagctat 892
||||| ||||| | |||||| | |||||||||||||||||| || ||| |||| |||||
Sbjct: 254 gtctggacagttagccttccacgaaccatatccatcgggtacgttgcanacatggctat 196
>gb|BE037551.1|BE037551 AA01B01 AA Arabidopsis thaliana cDNA 5' similar to neoxanthin
cleavage enzyme, mRNA sequence
Length = 819
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1259 ccctcgtgccgaattcctgcagcc 1282
||||||||||||||||||||||||
Sbjct: 28 ccctcgtgccgaattcctgcagcc 5
>gb|BE037596.1|BE037596 AA01F04 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 892
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1259 ccctcgtgccgaattcctgcagcc 1282
||||||||||||||||||||||||
Sbjct: 30 ccctcgtgccgaattcctgcagcc 7
>gb|BE037618.1|BE037618 AA01H07 AA Arabidopsis thaliana cDNA 5', mRNA sequence
Length = 869
Score = 48.1 bits (24), Expect = 0.004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1259 ccctcgtgccgaattcctgcagcc 1282
||||||||||||||||||||||||
Sbjct: 29 ccctcgtgccgaattcctgcagcc 6
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 543,947
Number of Sequences: 1013581
Number of extensions: 543947
Number of successful extensions: 36623
Number of sequences better than 0.5: 220
Number of HSP's better than 0.5 without gapping: 218
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 36054
Number of HSP's gapped (non-prelim): 567
length of query: 1282
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1262
effective length of database: 888,669,252
effective search space: 1121500596024
effective search space used: 1121500596024
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)