BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.202
(3202 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY099712.1| Arabidopsis thaliana sucrose-UDP glucosyltra... 98 1e-017
emb|AX506925.1| Sequence 1620 from Patent WO0216655 98 1e-017
emb|AX651931.1| Sequence 808 from Patent WO03000898 98 1e-017
ref|NM_122090.2| Arabidopsis thaliana SUS1 (SUCROSE SYNTHAS... 98 1e-017
ref|NM_001036838.1| Arabidopsis thaliana SUS1 (SUCROSE SYNT... 98 1e-017
gb|CB260037.1|CB260037 04-E011178-013-009-H01-T7R MPIZ-ADIS... 96 5e-017
gb|CB254324.1|CB254324 72-E018427-019-008-O17-T7R MPIZ-ADIS... 74 2e-010
gb|AY034958.1| Arabidopsis thaliana putative sucrose syntha... 74 2e-010
ref|NM_114187.3| Arabidopsis thaliana UDP-glycosyltransfera... 74 2e-010
gb|CD534456.1|CD534456 39G7 Arabidopsis Leaf Senescence Lib... 72 7e-010
gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 70 3e-009
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 70 3e-009
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 70 3e-009
emb|X70990.1|ATSUS1 A.thaliana gene for sucrose synthase 68 1e-008
gb|H37477.1|H37477 15606 Lambda-PRL2 Arabidopsis thaliana c... 66 4e-008
gb|CB256112.1|CB256112 01-E012742-027-007-A02-T7R MPIZ-ADIS... 66 4e-008
gb|B27305.1|B27305 T4F15TR TAMU Arabidopsis thaliana genomi... 62 6e-007
emb|AL088797.1|CNS00SSF Arabidopsis thaliana genome survey ... 62 6e-007
gb|AU226329.1|AU226329 AU226329 RAFL14 Arabidopsis thaliana... 62 6e-007
gb|BP571226.1|BP571226 BP571226 RAFL14 Arabidopsis thaliana... 62 6e-007
gb|AC074227.1|AC074227 Arabidopsis thaliana chromosome III ... 62 6e-007
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 62 6e-007
emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome ... 62 6e-007
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 62 6e-007
gb|CB256373.1|CB256373 80-E014060-027-007-A02q-T7R MPIZ-ADI... 60 3e-006
gb|BE522048.1|BE522048 M23C8STM Arabidopsis developing seed... 58 1e-005
gb|AV813826.1|AV813826 AV813826 RAFL9 Arabidopsis thaliana ... 58 1e-005
emb|X60987.1|ATSUCSYN A.thaliana sucrose synthase gene 58 1e-005
dbj|AB016872.1| Arabidopsis thaliana genomic DNA, chromosom... 58 1e-005
ref|NM_124296.2| Arabidopsis thaliana SUS2 (SUCROSE SYNTHAS... 58 1e-005
gb|BE039563.1|BE039563 AC06H01 AC Arabidopsis thaliana cDNA... 56 4e-005
gb|AV552178.1|AV552178 AV552178 Arabidopsis thaliana roots ... 56 4e-005
dbj|AK222090.1| Arabidopsis thaliana mRNA for sucrose-UDP g... 56 4e-005
gb|AY056784.1| Arabidopsis thaliana AT4g02280/T2H3_8 mRNA, ... 54 2e-004
gb|AY051001.1| Arabidopsis thaliana putative sucrose synthe... 54 2e-004
gb|AY142511.1| Arabidopsis thaliana putative sucrose synthe... 54 2e-004
emb|AX507720.1| Sequence 2415 from Patent WO0216655 54 2e-004
emb|BX828217.1|CNS0A2C8 Arabidopsis thaliana Full-length cD... 54 2e-004
emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, shor... 54 2e-004
gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3 54 2e-004
emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome... 54 2e-004
ref|NM_116461.2| Arabidopsis thaliana UDP-glycosyltransfera... 54 2e-004
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 54 2e-004
emb|AJ838722.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 6e-004
gb|BE528992.1|BE528992 M73G23STM Arabidopsis developing see... 50 0.002
gb|BE529221.1|BE529221 M73B17STM Arabidopsis developing see... 50 0.002
gb|BE529614.1|BE529614 M75M07STM Arabidopsis developing see... 50 0.002
gb|BE530300.1|BE530300 M77G19STM Arabidopsis developing see... 50 0.002
gb|BE521064.1|BE521064 M16F6STM Arabidopsis developing seed... 48 0.010
gb|AV783221.1|AV783221 AV783221 RAFL5 Arabidopsis thaliana ... 46 0.038
gb|CB256768.1|CB256768 61-E012744-027-007-J16-T7R MPIZ-ADIS... 46 0.038
gb|BP796644.1|BP796644 BP796644 RAFL5 Arabidopsis thaliana ... 46 0.038
ref|NM_105997.1| Arabidopsis thaliana UDP-glycosyltransfera... 46 0.038
gb|B19199.1|B19199 F6F11-T7 IGF Arabidopsis thaliana genomi... 44 0.15
>gb|AY099712.1| Arabidopsis thaliana sucrose-UDP glucosyltransferase (At5g20830)
mRNA, complete cds
Length = 1942
Score = 97.6 bits (49), Expect = 1e-017
Identities = 187/233 (80%)
Strand = Plus / Minus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||| ||||||||||| || | ||||||||||| | | || | |||
Sbjct: 1541 tcttggaaagtactagtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 1482
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 1481 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 1422
Query: 1634 tacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcg 1693
||||| ||||||||||| ||||| ||||||||||| ||||| ||||| | ||||| ||
Sbjct: 1421 tactttgttttctcaagagcatgagcaatggtacactgagtgacaccaagtttgtgagcc 1362
Query: 1694 agcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
| ||| | |||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 1361 aataaagaagcaacaagatttccatcactgtagttaccaatgataaggtcagg 1309
Score = 65.9 bits (33), Expect = 4e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 2019 tctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcagggtaac 2078
|||||| ||| || |||||||| | ||||| |||||||| || || |||||||||||||
Sbjct: 1036 tctccagagcacgaacttgatcaagaatgtaaacaacctgtccaccagtgtcagggtaac 977
Query: 2079 ccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattgaacacca 2138
| | ||||| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct: 976 caagaacattgtcctgagcaaagtaaccatgtggagagaggatcacaacgttgaacacca 917
Query: 2139 t 2139
|
Sbjct: 916 t 916
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 1697 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 1638
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 1637 aacacatcaatcccgtgaacaac 1615
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 1265 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 1206
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 1205 ttctctgttctgaagggcacacgaagaatat 1175
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1667 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 1621
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 614 ctctccttgtcatggaagagctt 592
>emb|AX506925.1| Sequence 1620 from Patent WO0216655
Length = 2427
Score = 97.6 bits (49), Expect = 1e-017
Identities = 187/233 (80%)
Strand = Plus / Minus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||| ||||||||||| || | ||||||||||| | | || | |||
Sbjct: 1454 tcttggaaagtactagtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 1395
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 1394 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 1335
Query: 1634 tacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcg 1693
||||| ||||||||||| ||||| ||||||||||| ||||| ||||| | ||||| ||
Sbjct: 1334 tactttgttttctcaagagcatgagcaatggtacactgagtgacaccaagtttgtgagcc 1275
Query: 1694 agcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
| ||| | |||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 1274 aataaagaagcaacaagatttccatcactgtagttaccaatgataaggtcagg 1222
Score = 65.9 bits (33), Expect = 4e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 2019 tctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcagggtaac 2078
|||||| ||| || |||||||| | ||||| |||||||| || || |||||||||||||
Sbjct: 949 tctccagagcacgaacttgatcaagaatgtaaacaacctgtccaccagtgtcagggtaac 890
Query: 2079 ccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattgaacacca 2138
| | ||||| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct: 889 caagaacattgtcctgagcaaagtaaccatgtggagagaggatcacaacgttgaacacca 830
Query: 2139 t 2139
|
Sbjct: 829 t 829
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 1610 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 1551
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 1550 aacacatcaatcccgtgaacaac 1528
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 1178 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 1119
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 1118 ttctctgttctgaagggcacacgaagaatat 1088
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 1997 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 1938
Query: 1031 gagatcca 1038
||||||||
Sbjct: 1937 gagatcca 1930
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1580 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 1534
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 527 ctctccttgtcatggaagagctt 505
>emb|AX651931.1| Sequence 808 from Patent WO03000898
Length = 2427
Score = 97.6 bits (49), Expect = 1e-017
Identities = 187/233 (80%)
Strand = Plus / Minus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||| ||||||||||| || | ||||||||||| | | || | |||
Sbjct: 1454 tcttggaaagtactagtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 1395
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 1394 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 1335
Query: 1634 tacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcg 1693
||||| ||||||||||| ||||| ||||||||||| ||||| ||||| | ||||| ||
Sbjct: 1334 tactttgttttctcaagagcatgagcaatggtacactgagtgacaccaagtttgtgagcc 1275
Query: 1694 agcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
| ||| | |||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 1274 aataaagaagcaacaagatttccatcactgtagttaccaatgataaggtcagg 1222
Score = 65.9 bits (33), Expect = 4e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 2019 tctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcagggtaac 2078
|||||| ||| || |||||||| | ||||| |||||||| || || |||||||||||||
Sbjct: 949 tctccagagcacgaacttgatcaagaatgtaaacaacctgtccaccagtgtcagggtaac 890
Query: 2079 ccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattgaacacca 2138
| | ||||| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct: 889 caagaacattgtcctgagcaaagtaaccatgtggagagaggatcacaacgttgaacacca 830
Query: 2139 t 2139
|
Sbjct: 829 t 829
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 1610 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 1551
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 1550 aacacatcaatcccgtgaacaac 1528
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 1178 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 1119
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 1118 ttctctgttctgaagggcacacgaagaatat 1088
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 1997 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 1938
Query: 1031 gagatcca 1038
||||||||
Sbjct: 1937 gagatcca 1930
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1580 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 1534
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 527 ctctccttgtcatggaagagctt 505
>ref|NM_122090.2| Arabidopsis thaliana SUS1 (SUCROSE SYNTHASE 1);
UDP-glycosyltransferase/ sucrose synthase AT5G20830
(SUS1) transcript variant AT5G20830.1 mRNA, complete cds
Length = 2887
Score = 97.6 bits (49), Expect = 1e-017
Identities = 187/233 (80%)
Strand = Plus / Minus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||| ||||||||||| || | ||||||||||| | | || | |||
Sbjct: 1541 tcttggaaagtactagtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 1482
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 1481 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 1422
Query: 1634 tacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcg 1693
||||| ||||||||||| ||||| ||||||||||| ||||| ||||| | ||||| ||
Sbjct: 1421 tactttgttttctcaagagcatgagcaatggtacactgagtgacaccaagtttgtgagcc 1362
Query: 1694 agcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
| ||| | |||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 1361 aataaagaagcaacaagatttccatcactgtagttaccaatgataaggtcagg 1309
Score = 65.9 bits (33), Expect = 4e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 2019 tctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcagggtaac 2078
|||||| ||| || |||||||| | ||||| |||||||| || || |||||||||||||
Sbjct: 1036 tctccagagcacgaacttgatcaagaatgtaaacaacctgtccaccagtgtcagggtaac 977
Query: 2079 ccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattgaacacca 2138
| | ||||| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct: 976 caagaacattgtcctgagcaaagtaaccatgtggagagaggatcacaacgttgaacacca 917
Query: 2139 t 2139
|
Sbjct: 916 t 916
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 1697 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 1638
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 1637 aacacatcaatcccgtgaacaac 1615
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 1265 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 1206
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 1205 ttctctgttctgaagggcacacgaagaatat 1175
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 2084 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 2025
Query: 1031 gagatcca 1038
||||||||
Sbjct: 2024 gagatcca 2017
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1667 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 1621
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 614 ctctccttgtcatggaagagctt 592
>ref|NM_001036838.1| Arabidopsis thaliana SUS1 (SUCROSE SYNTHASE 1);
UDP-glycosyltransferase/ sucrose synthase AT5G20830
(SUS1) transcript variant AT5G20830.2 mRNA, complete cds
Length = 2879
Score = 97.6 bits (49), Expect = 1e-017
Identities = 187/233 (80%)
Strand = Plus / Minus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||| ||||||||||| || | ||||||||||| | | || | |||
Sbjct: 1533 tcttggaaagtactagtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 1474
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 1473 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 1414
Query: 1634 tacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcg 1693
||||| ||||||||||| ||||| ||||||||||| ||||| ||||| | ||||| ||
Sbjct: 1413 tactttgttttctcaagagcatgagcaatggtacactgagtgacaccaagtttgtgagcc 1354
Query: 1694 agcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
| ||| | |||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 1353 aataaagaagcaacaagatttccatcactgtagttaccaatgataaggtcagg 1301
Score = 65.9 bits (33), Expect = 4e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 2019 tctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcagggtaac 2078
|||||| ||| || |||||||| | ||||| |||||||| || || |||||||||||||
Sbjct: 1028 tctccagagcacgaacttgatcaagaatgtaaacaacctgtccaccagtgtcagggtaac 969
Query: 2079 ccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattgaacacca 2138
| | ||||| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct: 968 caagaacattgtcctgagcaaagtaaccatgtggagagaggatcacaacgttgaacacca 909
Query: 2139 t 2139
|
Sbjct: 908 t 908
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 1689 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 1630
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 1629 aacacatcaatcccgtgaacaac 1607
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 1257 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 1198
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 1197 ttctctgttctgaagggcacacgaagaatat 1167
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 2076 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 2017
Query: 1031 gagatcca 1038
||||||||
Sbjct: 2016 gagatcca 2009
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1659 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 1613
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 606 ctctccttgtcatggaagagctt 584
>gb|CB260037.1|CB260037 04-E011178-013-009-H01-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770H019Q 5-PRIME, mRNA sequence
Length = 456
Score = 95.6 bits (48), Expect = 5e-017
Identities = 144/176 (81%)
Strand = Plus / Minus
Query: 1571 gtgaactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagtta 1630
||||||||||| ||||| ||||| | || |||| |||||||||||||| || || |
Sbjct: 362 gtgaactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatcc 303
Query: 1631 gggtacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgg 1690
|||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| | |||||
Sbjct: 302 gggtactttgttttctcaagagcatgagcaatggtacactgagtgacaccaagtttgtga 243
Query: 1691 gcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|| | ||| | |||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 242 gccaataaagaagcaacaagatttccatcactgtagttaccaatgataaggtcagg 187
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 143 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 84
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 83 ttctctgttctgaagggcacacgaagaatat 53
>gb|CB254324.1|CB254324 72-E018427-019-008-O17-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768O178Q 5-PRIME, mRNA sequence
Length = 564
Score = 73.8 bits (37), Expect = 2e-010
Identities = 304/393 (77%)
Strand = Plus / Minus
Query: 1354 ctcggtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggg 1413
||||||||| | |||||||||| || || || |||||||| || ||||||||||| ||
Sbjct: 535 ctcggtgtaagcgaagtagatgctcatatctgctccaggagagacaatgttgaactttgg 476
Query: 1414 gtcgaacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtg 1473
|| ||||||||||| ||||| || || ||||||| || || | |||||| | ||||
Sbjct: 475 atcaaacacatcaataccgtgaactacacggtacaacccgggaagtgtgaaagatctgtg 416
Query: 1474 tgactcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgat 1533
||| || || || || ||||||||| |||| || || |||||||| ||||| |||||
Sbjct: 415 gctctcatattgaccaacagtgtccttgcttccagcaatttcttggaaagtacttgtgat 356
Query: 1534 gatgaagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggta 1593
|||||| || | |||||||| || || | |||| ||||||||||| || ||||| ||
Sbjct: 355 gatgaaatctgtgtggttcatggcgataagatcagccgtgaactggcaagaaaagtgata 296
Query: 1594 gtgatcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaagcgc 1653
| || || | |||||||||||||| || || | ||||||||||| ||||| | ||
Sbjct: 295 cttctcgtcgagcttcttccagtagatatcagaatccgggtacttagtcttctccaaagc 236
Query: 1654 atgggcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtt 1713
||| || ||||| || ||||| ||||| | ||||| || | ||| | |||||||| ||
Sbjct: 235 atgagcgatggtgcactgagtgacaccaagtttgtgtgctaacaaggatgcaacaagatt 176
Query: 1714 tccgtcactgtagtttccgatgatcaggtcagg 1746
|| |||||||||||||| ||||||| ||||||
Sbjct: 175 accatcactgtagtttccaatgatcaagtcagg 143
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 95 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 36
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 35 ctgttctaaaaggcacacggaggatat 9
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || ||||||||||| || || ||||||||||| |||||
Sbjct: 501 ccaggagagacaatgttgaactttggatcaaacacatcaataccgtg 455
>gb|AY034958.1| Arabidopsis thaliana putative sucrose synthase (At3g43190) mRNA,
complete cds
Length = 1798
Score = 73.8 bits (37), Expect = 2e-010
Identities = 304/393 (77%)
Strand = Plus / Minus
Query: 1354 ctcggtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggg 1413
||||||||| | |||||||||| || || || |||||||| || ||||||||||| ||
Sbjct: 831 ctcggtgtaagcgaagtagatgctcatatctgctccaggagagacaatgttgaactttgg 772
Query: 1414 gtcgaacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtg 1473
|| ||||||||||| ||||| || || ||||||| || || | |||||| | ||||
Sbjct: 771 atcaaacacatcaataccgtgaactacacggtacaacccgggaagtgtgaaagatctgtg 712
Query: 1474 tgactcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgat 1533
||| || || || || ||||||||| |||| || || |||||||| ||||| |||||
Sbjct: 711 gctctcatattgaccaacagtgtccttgcttccagcaatttcttggaaagtacttgtgat 652
Query: 1534 gatgaagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggta 1593
|||||| || | |||||||| || || | |||| ||||||||||| || ||||| ||
Sbjct: 651 gatgaaatctgtgtggttcatggcgataagatcagccgtgaactggcaagaaaagtgata 592
Query: 1594 gtgatcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaagcgc 1653
| || || | |||||||||||||| || || | ||||||||||| ||||| | ||
Sbjct: 591 cttctcgtcgagcttcttccagtagatatcagaatccgggtacttagtcttctccaaagc 532
Query: 1654 atgggcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtt 1713
||| || ||||| || ||||| ||||| | ||||| || | ||| | |||||||| ||
Sbjct: 531 atgagcgatggtgcactgagtgacaccaagtttgtgtgctaacaaggatgcaacaagatt 472
Query: 1714 tccgtcactgtagtttccgatgatcaggtcagg 1746
|| |||||||||||||| ||||||| ||||||
Sbjct: 471 accatcactgtagtttccaatgatcaagtcagg 439
Score = 69.9 bits (35), Expect = 3e-009
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 2045 atgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaa 2104
||||| |||||||| || || |||||||||||||| | ||||| | ||||| |||||
Sbjct: 140 atgtaaacaacctgaccacctgtgtcagggtaaccaagaacattgtcctgagcaaagtat 81
Query: 2105 ccatgaggggagaggataacgacattgaacaccatggggatcgttccaaggaacttctc 2163
|||||||| |||||||| || || ||||| ||||| ||||| |||||||||| |||||
Sbjct: 80 ccatgaggagagaggatcacaacgttgaaaaccattgggattcttccaaggaaattctc 22
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 391 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 332
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 331 ctgttctaaaaggcacacggaggatat 305
Score = 56.0 bits (28), Expect = 4e-005
Identities = 163/208 (78%)
Strand = Plus / Minus
Query: 908 caggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaag 967
|||||||| |||||||| || |||| ||| || || || || | |||||||||||| ||
Sbjct: 1277 caggtcatagcctcaacaacagtcaacccaaaggcttcataaagagcaggctgcacaaat 1218
Query: 968 gcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgg 1027
|| || || ||||| || ||||| ||||| ||||| ||||| | || | |||||||||
Sbjct: 1217 gcacctttagtgtcacatatgtaacggtaaagctcaccgtttctcactctgttcatctgt 1158
Query: 1028 gcggagatccagcggatgtgcccgttcaggttgtactgctcgatgaggtcaaacatcttc 1087
| |||||||| |||| |||||||| || ||||| | ||| || || ||| |||| |||
Sbjct: 1157 gaagagatccatcggaattgcccgttgagtttgtattcctctatcagttcatacattttc 1098
Query: 1088 ttgaactcggcctgctcctccttgtcct 1115
|| | |||||||| ||| || |||||||
Sbjct: 1097 ttcatctcggccttctcttcgttgtcct 1070
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || ||||||||||| || || ||||||||||| |||||
Sbjct: 797 ccaggagagacaatgttgaactttggatcaaacacatcaataccgtg 751
>ref|NM_114187.3| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase/
transferase, transferring glycosyl groups AT3G43190 mRNA,
complete cds
Length = 2717
Score = 73.8 bits (37), Expect = 2e-010
Identities = 304/393 (77%)
Strand = Plus / Minus
Query: 1354 ctcggtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggg 1413
||||||||| | |||||||||| || || || |||||||| || ||||||||||| ||
Sbjct: 1767 ctcggtgtaagcgaagtagatgctcatatctgctccaggagagacaatgttgaactttgg 1708
Query: 1414 gtcgaacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtg 1473
|| ||||||||||| ||||| || || ||||||| || || | |||||| | ||||
Sbjct: 1707 atcaaacacatcaataccgtgaactacacggtacaacccgggaagtgtgaaagatctgtg 1648
Query: 1474 tgactcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgat 1533
||| || || || || ||||||||| |||| || || |||||||| ||||| |||||
Sbjct: 1647 gctctcatattgaccaacagtgtccttgcttccagcaatttcttggaaagtacttgtgat 1588
Query: 1534 gatgaagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggta 1593
|||||| || | |||||||| || || | |||| ||||||||||| || ||||| ||
Sbjct: 1587 gatgaaatctgtgtggttcatggcgataagatcagccgtgaactggcaagaaaagtgata 1528
Query: 1594 gtgatcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaagcgc 1653
| || || | |||||||||||||| || || | ||||||||||| ||||| | ||
Sbjct: 1527 cttctcgtcgagcttcttccagtagatatcagaatccgggtacttagtcttctccaaagc 1468
Query: 1654 atgggcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtt 1713
||| || ||||| || ||||| ||||| | ||||| || | ||| | |||||||| ||
Sbjct: 1467 atgagcgatggtgcactgagtgacaccaagtttgtgtgctaacaaggatgcaacaagatt 1408
Query: 1714 tccgtcactgtagtttccgatgatcaggtcagg 1746
|| |||||||||||||| ||||||| ||||||
Sbjct: 1407 accatcactgtagtttccaatgatcaagtcagg 1375
Score = 69.9 bits (35), Expect = 3e-009
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 2045 atgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaa 2104
||||| |||||||| || || |||||||||||||| | ||||| | ||||| |||||
Sbjct: 1076 atgtaaacaacctgaccacctgtgtcagggtaaccaagaacattgtcctgagcaaagtat 1017
Query: 2105 ccatgaggggagaggataacgacattgaacaccatggggatcgttccaaggaacttctc 2163
|||||||| |||||||| || || ||||| ||||| ||||| |||||||||| |||||
Sbjct: 1016 ccatgaggagagaggatcacaacgttgaaaaccattgggattcttccaaggaaattctc 958
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 1327 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 1268
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 1267 ctgttctaaaaggcacacggaggatat 1241
Score = 56.0 bits (28), Expect = 4e-005
Identities = 163/208 (78%)
Strand = Plus / Minus
Query: 908 caggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaag 967
|||||||| |||||||| || |||| ||| || || || || | |||||||||||| ||
Sbjct: 2213 caggtcatagcctcaacaacagtcaacccaaaggcttcataaagagcaggctgcacaaat 2154
Query: 968 gcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgg 1027
|| || || ||||| || ||||| ||||| ||||| ||||| | || | |||||||||
Sbjct: 2153 gcacctttagtgtcacatatgtaacggtaaagctcaccgtttctcactctgttcatctgt 2094
Query: 1028 gcggagatccagcggatgtgcccgttcaggttgtactgctcgatgaggtcaaacatcttc 1087
| |||||||| |||| |||||||| || ||||| | ||| || || ||| |||| |||
Sbjct: 2093 gaagagatccatcggaattgcccgttgagtttgtattcctctatcagttcatacattttc 2034
Query: 1088 ttgaactcggcctgctcctccttgtcct 1115
|| | |||||||| ||| || |||||||
Sbjct: 2033 ttcatctcggccttctcttcgttgtcct 2006
Score = 48.1 bits (24), Expect = 0.010
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 2440 gctctccttgtcatggaagagctttgatgacaggtgcctgttgaggaactgcacgccatt 2499
|||||||||||||||||||||||| | || || || | ||||||||||| |||||||
Sbjct: 681 gctctccttgtcatggaagagcttagccgagagatggcggttgaggaactcaacgccatc 622
Query: 2500 gccaatggactt 2511
|||||| ||||
Sbjct: 621 tccaatgtactt 610
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || ||||||||||| || || ||||||||||| |||||
Sbjct: 1733 ccaggagagacaatgttgaactttggatcaaacacatcaataccgtg 1687
>gb|CD534456.1|CD534456 39G7 Arabidopsis Leaf Senescence Library Arabidopsis thaliana cDNA
3', mRNA sequence
Length = 383
Score = 71.9 bits (36), Expect = 7e-010
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 1631 gggtacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgg 1690
|||||||| || ||||| || ||||| ||||||||||| ||||| ||||| | |||||
Sbjct: 377 gggtactttgtcttctccagagcatgagcaatggtacactgagtgacaccaagtttgtga 318
Query: 1691 gcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|| | ||| | |||||||||||||| ||||||||||| || ||||| ||||||||
Sbjct: 317 gccaataaagaagcaacaaggtttccatcactgtagttaccaatgataaggtcagg 262
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 218 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 159
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 158 ttctctgttctgaagggcacacgaagaatat 128
>gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15
Length = 89490
Score = 69.9 bits (35), Expect = 3e-009
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||| ||||||||||| || | ||||||||||| | | || | |||
Sbjct: 84890 tcttggaaagtactagtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 84949
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 84950 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 85009
Query: 1634 tacttagttttctcaagcgcatgggcaatggtaca 1668
||||| ||||||||||| ||||| |||||||||||
Sbjct: 85010 tactttgttttctcaagagcatgagcaatggtaca 85044
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 85336 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 85395
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 85396 ttctctgttctgaagggcacacgaagaatat 85426
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 84648 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 84707
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 84708 aacacatcaatcccgtgaacaac 84730
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 84184 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 84243
Query: 1031 gagatcca 1038
||||||||
Sbjct: 84244 gagatcca 84251
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 84678 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 84724
Score = 52.0 bits (26), Expect = 6e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | ||||| | ||||| ||||||||||| || |||||||| ||
Sbjct: 85782 gtgtcagggtaaccaagaacattgtcctgagcaaagtaaccatgtggagagaggatcaca 85841
Query: 2126 acattgaacaccat 2139
|| |||||||||||
Sbjct: 85842 acgttgaacaccat 85855
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 85168 gcaacaagatttccatcactgtagttaccaatgataaggtcagg 85211
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 86237 ctctccttgtcatggaagagctt 86259
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 69.9 bits (35), Expect = 3e-009
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||| ||||||||||| || | ||||||||||| | | || | |||
Sbjct: 6764440 tcttggaaagtactagtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 6764499
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 6764500 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 6764559
Query: 1634 tacttagttttctcaagcgcatgggcaatggtaca 1668
||||| ||||||||||| ||||| |||||||||||
Sbjct: 6764560 tactttgttttctcaagagcatgagcaatggtaca 6764594
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 6764886 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 6764945
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 6764946 ttctctgttctgaagggcacacgaagaatat 6764976
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 6764198 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 6764257
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 6764258 aacacatcaatcccgtgaacaac 6764280
Score = 58.0 bits (29), Expect = 1e-005
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||||||||| |||||||| ||||| | |||||||||||||||| ||||| ||||
Sbjct: 17985476 aagtctccaggtatggccagacatcaaaccttgagatccacttgcgaagaattccctttt 17985535
Query: 1854 c 1854
|
Sbjct: 17985536 c 17985536
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 6763734 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 6763793
Query: 1031 gagatcca 1038
||||||||
Sbjct: 6763794 gagatcca 6763801
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 6764228 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 6764274
Score = 52.0 bits (26), Expect = 6e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | ||||| | ||||| ||||||||||| || |||||||| ||
Sbjct: 6765332 gtgtcagggtaaccaagaacattgtcctgagcaaagtaaccatgtggagagaggatcaca 6765391
Query: 2126 acattgaacaccat 2139
|| |||||||||||
Sbjct: 6765392 acgttgaacaccat 6765405
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1199 agcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggctt 1254
|||||||||||||| ||||| | ||| || | ||||| |||||||||||||||||
Sbjct: 17984406 agcccagtcaagtttttcaccctgtcaagtcttgccatagagaagatgattggctt 17984461
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 6764718 gcaacaagatttccatcactgtagttaccaatgataaggtcagg 6764761
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 6765787 ctctccttgtcatggaagagctt 6765809
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1511 atctcttggaaggtactggtgatgatgaagtcggcatggttcattgcaat 1560
||||||||| | || |||||||||||||| ||||||| ||||| |||||
Sbjct: 17984914 atctcttggtatgtgctggtgatgatgaaatcggcattattcatggcaat 17984963
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 69.9 bits (35), Expect = 3e-009
Identities = 125/155 (80%)
Strand = Plus / Plus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||| ||||||||||| || | ||||||||||| | | || | |||
Sbjct: 7051910 tcttggaaagtactagtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 7051969
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 7051970 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 7052029
Query: 1634 tacttagttttctcaagcgcatgggcaatggtaca 1668
||||| ||||||||||| ||||| |||||||||||
Sbjct: 7052030 tactttgttttctcaagagcatgagcaatggtaca 7052064
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 7052356 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 7052415
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 7052416 ttctctgttctgaagggcacacgaagaatat 7052446
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 7051668 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 7051727
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 7051728 aacacatcaatcccgtgaacaac 7051750
Score = 58.0 bits (29), Expect = 1e-005
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||||||||| |||||||| ||||| | |||||||||||||||| ||||| ||||
Sbjct: 19962575 aagtctccaggtatggccagacatcaaaccttgagatccacttgcgaagaattccctttt 19962634
Query: 1854 c 1854
|
Sbjct: 19962635 c 19962635
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 7051204 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 7051263
Query: 1031 gagatcca 1038
||||||||
Sbjct: 7051264 gagatcca 7051271
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 7051698 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 7051744
Score = 52.0 bits (26), Expect = 6e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | ||||| | ||||| ||||||||||| || |||||||| ||
Sbjct: 7052802 gtgtcagggtaaccaagaacattgtcctgagcaaagtaaccatgtggagagaggatcaca 7052861
Query: 2126 acattgaacaccat 2139
|| |||||||||||
Sbjct: 7052862 acgttgaacaccat 7052875
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1199 agcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggctt 1254
|||||||||||||| ||||| | ||| || | ||||| |||||||||||||||||
Sbjct: 19961505 agcccagtcaagtttttcaccctgtcaagtcttgccatagagaagatgattggctt 19961560
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 7052188 gcaacaagatttccatcactgtagttaccaatgataaggtcagg 7052231
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 7053257 ctctccttgtcatggaagagctt 7053279
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1511 atctcttggaaggtactggtgatgatgaagtcggcatggttcattgcaat 1560
||||||||| | || |||||||||||||| ||||||| ||||| |||||
Sbjct: 19962013 atctcttggtatgtgctggtgatgatgaaatcggcattattcatggcaat 19962062
>emb|X70990.1|ATSUS1 A.thaliana gene for sucrose synthase
Length = 5007
Score = 67.9 bits (34), Expect = 1e-008
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | |||||| ||||||| ||||||||||| || |||||||| ||
Sbjct: 2720 gtgtcagggtaaccaaggacattgtcttgagcaaagtaaccatgtggagagaggatcaca 2661
Query: 2126 acattgaacaccat 2139
|| |||||||||||
Sbjct: 2660 acgttgaacaccat 2647
Score = 61.9 bits (31), Expect = 6e-007
Identities = 124/155 (80%)
Strand = Plus / Minus
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
|||||||| ||||||||||||||||| || | ||||||||||| | | || | |||
Sbjct: 3611 tcttggaaagtactggtgatgatgaaatcagtgtggttcattgcgaaaatatccgcagtg 3552
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||| ||||| | || |||| |||||||||||||| || || | |||
Sbjct: 3551 aactggcatgagaaatggtacttgtcgtcaagcttcttccagtagatatcagaatccggg 3492
Query: 1634 tacttagttttctcaagcgcatgggcaatggtaca 1668
||||| || ||||| || ||||| |||||||||||
Sbjct: 3491 tactttgtcttctccagagcatgagcaatggtaca 3457
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 3166 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 3107
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 3106 ttctctgttctgaagggcacacgaagaatat 3076
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1388 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggacaac 1440
|||||||| || |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 3823 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtgaacaac 3771
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|||||||||||||| ||||||||||| || ||||| ||||||||
Sbjct: 3336 gcaacaaggtttccatcactgtagttaccaatgataaggtcagg 3293
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 3823 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 3777
Score = 46.1 bits (23), Expect = 0.038
Identities = 104/131 (79%)
Strand = Plus / Minus
Query: 908 caggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaag 967
|||||||| ||||| || || |||| ||| || || || || || ||||| ||||| ||
Sbjct: 4380 caggtcatagcctccacaacagtcaacccaaaggcttcatacaatgcaggttgcacaaaa 4321
Query: 968 gcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgg 1027
|| || |||||||| ||||| || ||||||||||| ||||| | || |||| ||||||
Sbjct: 4320 gcacctttggtgtcacagatataccggtacagctcaccgttccttacccggtccatctga 4261
Query: 1028 gcggagatcca 1038
| |||||||||
Sbjct: 4260 gaggagatcca 4250
Score = 46.1 bits (23), Expect = 0.038
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2441 ctctccttgtcatggaagagctt 2463
|||||||||||||||||||||||
Sbjct: 2276 ctctccttgtcatggaagagctt 2254
>gb|H37477.1|H37477 15606 Lambda-PRL2 Arabidopsis thaliana cDNA clone 182C20T7, mRNA
sequence
Length = 434
Score = 65.9 bits (33), Expect = 4e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 2019 tctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcagggtaac 2078
|||||| ||| || |||||||| | ||||| |||||||| || || |||||||||||||
Sbjct: 197 tctccagagcacgaacttgatcaagaatgtaaacaacctgtccaccagtgtcagggtaac 138
Query: 2079 ccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattgaacacca 2138
| | ||||| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct: 137 caagaacattgtcctgagcaaagtaaccatgtggagagaggatcacaacgttgaacacca 78
Query: 2139 t 2139
|
Sbjct: 77 t 77
>gb|CB256112.1|CB256112 01-E012742-027-007-A02-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772A027Q 5-PRIME, mRNA sequence
Length = 684
Score = 65.9 bits (33), Expect = 4e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 2019 tctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcagggtaac 2078
|||||| ||| || |||||||| | ||||| || ||||| || || |||||||||||||
Sbjct: 312 tctccagagcacggacttgatcaagaatgtaaaccacctgtccaccagtgtcagggtaac 253
Query: 2079 ccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattgaacacca 2138
| | |||||| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct: 252 caaggacattgtcctgagcaaagtaaccatgtggagagaggatcacaacgttgaacacca 193
Query: 2139 t 2139
|
Sbjct: 192 t 192
Score = 61.9 bits (31), Expect = 6e-007
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||||||| || || ||||||||||| || | |||||||| |||||||| || ||
Sbjct: 541 gtgtaagtctctagatatggccagacttcgaaccttgagatccatttgcgaacaataccc 482
Query: 1850 ttttctgttctgaatggcacgcgaaggatat 1880
|| ||||||||||| ||||| ||||| ||||
Sbjct: 481 ttctctgttctgaagggcacacgaagaatat 451
>gb|B27305.1|B27305 T4F15TR TAMU Arabidopsis thaliana genomic clone T4F15, DNA sequence
Length = 445
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 331 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 272
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 271 aacacatcaatcccgtgaacaac 249
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 301 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 255
>emb|AL088797.1|CNS00SSF Arabidopsis thaliana genome survey sequence T7 end of BAC T2K14 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 460
Score = 61.9 bits (31), Expect = 6e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 331 gtgtaagggaagtagatgctcatatcagcaccaggagagacaatgttgaacttgggatca 272
Query: 1418 aacacatcaatgccgtggacaac 1440
||||||||||| ||||| |||||
Sbjct: 271 aacacatcaatcccgtgaacaac 249
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 301 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 255
>gb|AU226329.1|AU226329 AU226329 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-25-C06 3',
mRNA sequence
Length = 448
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 105 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 164
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 165 ctgttctaaaaggcacacggaggatat 191
>gb|BP571226.1|BP571226 BP571226 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-75-H09 3',
mRNA sequence
Length = 450
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 106 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 165
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 166 ctgttctaaaaggcacacggaggatat 192
Score = 52.0 bits (26), Expect = 6e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 2045 atgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaa 2104
||||| |||||||| || || |||||||||||||| | ||||| | ||||| |||||
Sbjct: 357 atgtaaacaacctgaccacctgtgtcagggtaaccaagaacattgtcctgagcaaagtat 416
Query: 2105 ccatgaggggagaggataacgacattgaacacca 2138
|||||||| |||||||| || || ||||| ||||
Sbjct: 417 ccatgaggagagaggatcacaacgttgaaaacca 450
>gb|AC074227.1|AC074227 Arabidopsis thaliana chromosome III clone TAMU-T15O15, *** SEQUENCING
IN PROGRESS ***, 3 unordered pieces
Length = 80970
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 9618 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 9559
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 9558 ctgttctaaaaggcacacggaggatat 9532
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | ||||| | ||||| ||||| |||||||| |||||||| ||
Sbjct: 9192 gtgtcagggtaaccaagaacattgtcctgagcaaagtatccatgaggagagaggatcaca 9133
Query: 2126 acattgaacaccatggggatcgttccaaggaacttctc 2163
|| ||||| ||||| ||||| |||||||||| |||||
Sbjct: 9132 acgttgaaaaccattgggattcttccaaggaaattctc 9095
Score = 56.0 bits (28), Expect = 4e-005
Identities = 163/208 (78%)
Strand = Plus / Minus
Query: 908 caggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaag 967
|||||||| |||||||| || |||| ||| || || || || | |||||||||||| ||
Sbjct: 10863 caggtcatagcctcaacaacagtcaacccaaaggcttcataaagagcaggctgcacaaat 10804
Query: 968 gcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgg 1027
|| || || ||||| || ||||| ||||| ||||| ||||| | || | |||||||||
Sbjct: 10803 gcacctttagtgtcacatatgtaacggtaaagctcaccgtttctcactctgttcatctgt 10744
Query: 1028 gcggagatccagcggatgtgcccgttcaggttgtactgctcgatgaggtcaaacatcttc 1087
| |||||||| |||| |||||||| || ||||| | ||| || || ||| |||| |||
Sbjct: 10743 gaagagatccatcggaattgcccgttgagtttgtattcctctatcagttcatacattttc 10684
Query: 1088 ttgaactcggcctgctcctccttgtcct 1115
|| | |||||||| ||| || |||||||
Sbjct: 10683 ttcatctcggccttctcttcgttgtcct 10656
Score = 54.0 bits (27), Expect = 2e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 1354 ctcggtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggg 1413
||||||||| | |||||||||| || || || |||||||| || ||||||||||| ||
Sbjct: 10332 ctcggtgtaagcgaagtagatgctcatatctgctccaggagagacaatgttgaactttgg 10273
Query: 1414 gtcgaacacatcaatgccgtggacaacgcggtaca 1448
|| ||||||||||| ||||| || || |||||||
Sbjct: 10272 atcaaacacatcaataccgtgaactacacggtaca 10238
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|||||||| || || |||||||||||||| ||||||| ||||||
Sbjct: 9800 gcaacaagattaccatcactgtagtttccaatgatcaagtcagg 9757
Score = 48.1 bits (24), Expect = 0.010
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 2440 gctctccttgtcatggaagagctttgatgacaggtgcctgttgaggaactgcacgccatt 2499
|||||||||||||||||||||||| | || || || | ||||||||||| |||||||
Sbjct: 8736 gctctccttgtcatggaagagcttagccgagagatggcggttgaggaactcaacgccatc 8677
Query: 2500 gccaatggactt 2511
|||||| ||||
Sbjct: 8676 tccaatgtactt 8665
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || ||||||||||| || || ||||||||||| |||||
Sbjct: 10298 ccaggagagacaatgttgaactttggatcaaacacatcaataccgtg 10252
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 15145032 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 15145091
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 15145092 ctgttctaaaaggcacacggaggatat 15145118
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | ||||| | ||||| ||||| |||||||| |||||||| ||
Sbjct: 15145458 gtgtcagggtaaccaagaacattgtcctgagcaaagtatccatgaggagagaggatcaca 15145517
Query: 2126 acattgaacaccatggggatcgttccaaggaacttctc 2163
|| ||||| ||||| ||||| |||||||||| |||||
Sbjct: 15145518 acgttgaaaaccattgggattcttccaaggaaattctc 15145555
Score = 56.0 bits (28), Expect = 4e-005
Identities = 163/208 (78%)
Strand = Plus / Plus
Query: 908 caggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaag 967
|||||||| |||||||| || |||| ||| || || || || | |||||||||||| ||
Sbjct: 15143787 caggtcatagcctcaacaacagtcaacccaaaggcttcataaagagcaggctgcacaaat 15143846
Query: 968 gcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgg 1027
|| || || ||||| || ||||| ||||| ||||| ||||| | || | |||||||||
Sbjct: 15143847 gcacctttagtgtcacatatgtaacggtaaagctcaccgtttctcactctgttcatctgt 15143906
Query: 1028 gcggagatccagcggatgtgcccgttcaggttgtactgctcgatgaggtcaaacatcttc 1087
| |||||||| |||| |||||||| || ||||| | ||| || || ||| |||| |||
Sbjct: 15143907 gaagagatccatcggaattgcccgttgagtttgtattcctctatcagttcatacattttc 15143966
Query: 1088 ttgaactcggcctgctcctccttgtcct 1115
|| | |||||||| ||| || |||||||
Sbjct: 15143967 ttcatctcggccttctcttcgttgtcct 15143994
Score = 54.0 bits (27), Expect = 2e-004
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 1354 ctcggtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggg 1413
||||||||| | |||||||||| || || || |||||||| || ||||||||||| ||
Sbjct: 15144318 ctcggtgtaagcgaagtagatgctcatatctgctccaggagagacaatgttgaactttgg 15144377
Query: 1414 gtcgaacacatcaatgccgtggacaacgcggtaca 1448
|| ||||||||||| ||||| || || |||||||
Sbjct: 15144378 atcaaacacatcaataccgtgaactacacggtaca 15144412
Score = 48.1 bits (24), Expect = 0.010
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 2440 gctctccttgtcatggaagagctttgatgacaggtgcctgttgaggaactgcacgccatt 2499
|||||||||||||||||||||||| | || || || | ||||||||||| |||||||
Sbjct: 15145914 gctctccttgtcatggaagagcttagccgagagatggcggttgaggaactcaacgccatc 15145973
Query: 2500 gccaatggactt 2511
|||||| ||||
Sbjct: 15145974 tccaatgtactt 15145985
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|||||||| || || |||||||||||||| ||||||| ||||||
Sbjct: 15144850 gcaacaagattaccatcactgtagtttccaatgatcaagtcagg 15144893
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || ||||||||||| || || ||||||||||| |||||
Sbjct: 15144352 ccaggagagacaatgttgaactttggatcaaacacatcaataccgtg 15144398
>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15
Length = 110800
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 16630 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 16689
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 16690 ctgttctaaaaggcacacggaggatat 16716
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | ||||| | ||||| ||||| |||||||| |||||||| ||
Sbjct: 17056 gtgtcagggtaaccaagaacattgtcctgagcaaagtatccatgaggagagaggatcaca 17115
Query: 2126 acattgaacaccatggggatcgttccaaggaacttctc 2163
|| ||||| ||||| ||||| |||||||||| |||||
Sbjct: 17116 acgttgaaaaccattgggattcttccaaggaaattctc 17153
Score = 56.0 bits (28), Expect = 4e-005
Identities = 163/208 (78%)
Strand = Plus / Plus
Query: 908 caggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaag 967
|||||||| |||||||| || |||| ||| || || || || | |||||||||||| ||
Sbjct: 15385 caggtcatagcctcaacaacagtcaacccaaaggcttcataaagagcaggctgcacaaat 15444
Query: 968 gcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgg 1027
|| || || ||||| || ||||| ||||| ||||| ||||| | || | |||||||||
Sbjct: 15445 gcacctttagtgtcacatatgtaacggtaaagctcaccgtttctcactctgttcatctgt 15504
Query: 1028 gcggagatccagcggatgtgcccgttcaggttgtactgctcgatgaggtcaaacatcttc 1087
| |||||||| |||| |||||||| || ||||| | ||| || || ||| |||| |||
Sbjct: 15505 gaagagatccatcggaattgcccgttgagtttgtattcctctatcagttcatacattttc 15564
Query: 1088 ttgaactcggcctgctcctccttgtcct 1115
|| | |||||||| ||| || |||||||
Sbjct: 15565 ttcatctcggccttctcttcgttgtcct 15592
Score = 54.0 bits (27), Expect = 2e-004
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 1354 ctcggtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggg 1413
||||||||| | |||||||||| || || || |||||||| || ||||||||||| ||
Sbjct: 15916 ctcggtgtaagcgaagtagatgctcatatctgctccaggagagacaatgttgaactttgg 15975
Query: 1414 gtcgaacacatcaatgccgtggacaacgcggtaca 1448
|| ||||||||||| ||||| || || |||||||
Sbjct: 15976 atcaaacacatcaataccgtgaactacacggtaca 16010
Score = 48.1 bits (24), Expect = 0.010
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 2440 gctctccttgtcatggaagagctttgatgacaggtgcctgttgaggaactgcacgccatt 2499
|||||||||||||||||||||||| | || || || | ||||||||||| |||||||
Sbjct: 17512 gctctccttgtcatggaagagcttagccgagagatggcggttgaggaactcaacgccatc 17571
Query: 2500 gccaatggactt 2511
|||||| ||||
Sbjct: 17572 tccaatgtactt 17583
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|||||||| || || |||||||||||||| ||||||| ||||||
Sbjct: 16448 gcaacaagattaccatcactgtagtttccaatgatcaagtcagg 16491
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || ||||||||||| || || ||||||||||| |||||
Sbjct: 15950 ccaggagagacaatgttgaactttggatcaaacacatcaataccgtg 15996
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 61.9 bits (31), Expect = 6e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||| || ||||||||||| ||||| | || ||||| |||||||||||||| || |
Sbjct: 15191979 aagtctctagatacggccagacctcaaaccttgatatccatttgcgaacgattcctttct 15192038
Query: 1854 ctgttctgaatggcacgcgaaggatat 1880
||||||| || ||||| || |||||||
Sbjct: 15192039 ctgttctaaaaggcacacggaggatat 15192065
Score = 60.0 bits (30), Expect = 3e-006
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | ||||| | ||||| ||||| |||||||| |||||||| ||
Sbjct: 15192405 gtgtcagggtaaccaagaacattgtcctgagcaaagtatccatgaggagagaggatcaca 15192464
Query: 2126 acattgaacaccatggggatcgttccaaggaacttctc 2163
|| ||||| ||||| ||||| |||||||||| |||||
Sbjct: 15192465 acgttgaaaaccattgggattcttccaaggaaattctc 15192502
Score = 56.0 bits (28), Expect = 4e-005
Identities = 163/208 (78%)
Strand = Plus / Plus
Query: 908 caggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaag 967
|||||||| |||||||| || |||| ||| || || || || | |||||||||||| ||
Sbjct: 15190734 caggtcatagcctcaacaacagtcaacccaaaggcttcataaagagcaggctgcacaaat 15190793
Query: 968 gcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgg 1027
|| || || ||||| || ||||| ||||| ||||| ||||| | || | |||||||||
Sbjct: 15190794 gcacctttagtgtcacatatgtaacggtaaagctcaccgtttctcactctgttcatctgt 15190853
Query: 1028 gcggagatccagcggatgtgcccgttcaggttgtactgctcgatgaggtcaaacatcttc 1087
| |||||||| |||| |||||||| || ||||| | ||| || || ||| |||| |||
Sbjct: 15190854 gaagagatccatcggaattgcccgttgagtttgtattcctctatcagttcatacattttc 15190913
Query: 1088 ttgaactcggcctgctcctccttgtcct 1115
|| | |||||||| ||| || |||||||
Sbjct: 15190914 ttcatctcggccttctcttcgttgtcct 15190941
Score = 54.0 bits (27), Expect = 2e-004
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 1354 ctcggtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggg 1413
||||||||| | |||||||||| || || || |||||||| || ||||||||||| ||
Sbjct: 15191265 ctcggtgtaagcgaagtagatgctcatatctgctccaggagagacaatgttgaactttgg 15191324
Query: 1414 gtcgaacacatcaatgccgtggacaacgcggtaca 1448
|| ||||||||||| ||||| || || |||||||
Sbjct: 15191325 atcaaacacatcaataccgtgaactacacggtaca 15191359
Score = 48.1 bits (24), Expect = 0.010
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 2440 gctctccttgtcatggaagagctttgatgacaggtgcctgttgaggaactgcacgccatt 2499
|||||||||||||||||||||||| | || || || | ||||||||||| |||||||
Sbjct: 15192861 gctctccttgtcatggaagagcttagccgagagatggcggttgaggaactcaacgccatc 15192920
Query: 2500 gccaatggactt 2511
|||||| ||||
Sbjct: 15192921 tccaatgtactt 15192932
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgatcaggtcagg 1746
|||||||| || || |||||||||||||| ||||||| ||||||
Sbjct: 15191797 gcaacaagattaccatcactgtagtttccaatgatcaagtcagg 15191840
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || ||||||||||| || || ||||||||||| |||||
Sbjct: 15191299 ccaggagagacaatgttgaactttggatcaaacacatcaataccgtg 15191345
>gb|CB256373.1|CB256373 80-E014060-027-007-A02q-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772A027Q 5-PRIME, mRNA sequence
Length = 468
Score = 60.0 bits (30), Expect = 3e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 2066 gtgtcagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacg 2125
|||||||||||||| | |||||| | ||||| ||||||||||| || |||||||| ||
Sbjct: 265 gtgtcagggtaaccaaggacattgtcctgagcaaagtaaccatgtggagagaggatcaca 206
Query: 2126 acattgaacaccat 2139
|| |||||||||||
Sbjct: 205 acgttgaacaccat 192
>gb|BE522048.1|BE522048 M23C8STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M23C8 5', mRNA sequence
Length = 395
Score = 58.0 bits (29), Expect = 1e-005
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||||||||| |||||||| ||||| | |||||||||||||||| ||||| ||||
Sbjct: 213 aagtctccaggtatggccagacatcaaaccttgagatccacttgcgaagaattccctttt 154
Query: 1854 c 1854
|
Sbjct: 153 c 153
>gb|AV813826.1|AV813826 AV813826 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-80-E22 3', mRNA
sequence
Length = 402
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1388 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggacaac 1440
|||||||| || |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 274 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtgaacaac 326
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtg 3191
|||||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 274 ccaggagagacaatgttgaacttgggatcaaacacatcaatcccgtg 320
>emb|X60987.1|ATSUCSYN A.thaliana sucrose synthase gene
Length = 4441
Score = 58.0 bits (29), Expect = 1e-005
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||||||||| |||||||| ||||| | |||||||||||||||| ||||| ||||
Sbjct: 2424 aagtctccaggtatggccagacatcaaaccttgagatccacttgcgaagaattccctttt 2365
Query: 1854 c 1854
|
Sbjct: 2364 c 2364
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1199 agcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggctt 1254
|||||||||||||| ||||| | ||| || | ||||| |||||||||||||||||
Sbjct: 3490 agcccagtcaagtttttcaccctgtcaagtcttgccatagagaagatgattggctt 3435
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1511 atctcttggaaggtactggtgatgatgaagtcggcatggttcattgcaat 1560
||||||||| | || |||||||||||||| ||||||| ||||| |||||
Sbjct: 2988 atctcttggtatgtgctggtgatgatgaaatcggcattattcatggcaat 2939
>dbj|AB016872.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21P3
Length = 86001
Score = 58.0 bits (29), Expect = 1e-005
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||||||||| |||||||| ||||| | |||||||||||||||| ||||| ||||
Sbjct: 23458 aagtctccaggtatggccagacatcaaaccttgagatccacttgcgaagaattccctttt 23517
Query: 1854 c 1854
|
Sbjct: 23518 c 23518
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1199 agcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggctt 1254
|||||||||||||| ||||| | ||| || | ||||| |||||||||||||||||
Sbjct: 22388 agcccagtcaagtttttcaccctgtcaagtcttgccatagagaagatgattggctt 22443
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1511 atctcttggaaggtactggtgatgatgaagtcggcatggttcattgcaat 1560
||||||||| | || |||||||||||||| ||||||| ||||| |||||
Sbjct: 22896 atctcttggtatgtgctggtgatgatgaaatcggcattattcatggcaat 22945
>ref|NM_124296.2| Arabidopsis thaliana SUS2 (SUCROSE SYNTHASE 2);
UDP-glycosyltransferase/ sucrose synthase/ transferase,
transferring glycosyl groups AT5G49190 (SUS2) mRNA,
complete cds
Length = 2511
Score = 58.0 bits (29), Expect = 1e-005
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||||||||||||| |||||||| ||||| | |||||||||||||||| ||||| ||||
Sbjct: 1165 aagtctccaggtatggccagacatcaaaccttgagatccacttgcgaagaattccctttt 1106
Query: 1854 c 1854
|
Sbjct: 1105 c 1105
Score = 50.1 bits (25), Expect = 0.002
Identities = 97/121 (80%)
Strand = Plus / Minus
Query: 2045 atgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaa 2104
|||||||||||||| || || || ||||| |||||||||||| ||||| | ||||||
Sbjct: 914 atgtagacaacctgtccaccagtatcaggcagacccaagacattggcttggccaaagtaa 855
Query: 2105 ccatgaggggagaggataacgacattgaacaccatggggatcgttccaaggaacttctcc 2164
||||| || || | || || |||||||||||||| || ||| |||| || ||| |||||
Sbjct: 854 ccatgcggagacaaaatcacaacattgaacaccataggaatccttcctagaaacgtctcc 795
Query: 2165 a 2165
|
Sbjct: 794 a 794
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1199 agcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggctt 1254
|||||||||||||| ||||| | ||| || | ||||| |||||||||||||||||
Sbjct: 1760 agcccagtcaagtttttcaccctgtcaagtcttgccatagagaagatgattggctt 1705
Score = 48.1 bits (24), Expect = 0.010
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 1421 acatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcg 1480
|||||||| || || ||||| ||||| || |||||||| ||||| || |||| ||||
Sbjct: 1538 acatcaattccatgaacaactcggtaaagaccaggcatagtgaaagctgtgtggctctcg 1479
Query: 1481 tactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaag 1540
|| || || || ||| |||| |||| || ||||||||| | || ||||||||||||||
Sbjct: 1478 tattgcccaacattgttcttgcttcccgcaatctcttggtatgtgctggtgatgatgaaa 1419
Query: 1541 tcggcatggttcattgcaat 1560
||||||| ||||| |||||
Sbjct: 1418 tcggcattattcatggcaat 1399
>gb|BE039563.1|BE039563 AC06H01 AC Arabidopsis thaliana cDNA 5' similar to sucrose synthase,
mRNA sequence
Length = 719
Score = 56.0 bits (28), Expect = 4e-005
Identities = 97/120 (80%)
Strand = Plus / Minus
Query: 2044 gatgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagta 2103
|||||| |||||||| || || |||||||||||||| | ||||| | ||||| ||||
Sbjct: 222 gatgtaaacaacctgaccacctgtgtcagggtaaccaagaacattgtcctgagcagagta 163
Query: 2104 accatgaggggagaggataacgacattgaacaccatggggatcgttccaaggaacttctc 2163
|||||||| |||||||| | || ||||| ||||| ||||| |||||||||| |||||
Sbjct: 162 tccatgaggagagaggatcgcaacgttgaaaaccattgggattcttccaaggaaattctc 103
>gb|AV552178.1|AV552178 AV552178 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ23a06R 5', mRNA sequence
Length = 332
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 256 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 197
Query: 1031 gagatcca 1038
||||||||
Sbjct: 196 gagatcca 189
>dbj|AK222090.1| Arabidopsis thaliana mRNA for sucrose-UDP glucosyltransferase,
complete cds, clone: RAFL22-85-C03
Length = 1149
Score = 56.0 bits (28), Expect = 4e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 971 cccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcg 1030
||||||||||| |||||||| ||||||||||| ||||| | || |||| |||||| | |
Sbjct: 437 cccttggtgtcacagatgtaccggtacagctcaccgttccttacccggtccatctgagag 378
Query: 1031 gagatcca 1038
||||||||
Sbjct: 377 gagatcca 370
>gb|AY056784.1| Arabidopsis thaliana AT4g02280/T2H3_8 mRNA, complete cds
Length = 2898
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 1504 gcaacaaggtttccgtcactatagttaccgatgat 1470
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 887 gtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagcccgaaagcctcg 946
|||||||| || || || ||||| ||||| || || || ||||| || || |||||||||
Sbjct: 2323 gtggcaaaagtcgggagcccgcaagtcatcgcttccactaccgtaagtccaaaagcctcg 2264
Query: 947 tagaaagcaggctg 960
||||| ||||||||
Sbjct: 2263 tagaacgcaggctg 2250
>gb|AY051001.1| Arabidopsis thaliana putative sucrose synthetase (At4g02280) mRNA,
complete cds
Length = 2904
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 1479 gcaacaaggtttccgtcactatagttaccgatgat 1445
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 887 gtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagcccgaaagcctcg 946
|||||||| || || || ||||| ||||| || || || ||||| || || |||||||||
Sbjct: 2298 gtggcaaaagtcgggagcccgcaagtcatcgcttccactaccgtaagtccaaaagcctcg 2239
Query: 947 tagaaagcaggctg 960
||||| ||||||||
Sbjct: 2238 tagaacgcaggctg 2225
>gb|AY142511.1| Arabidopsis thaliana putative sucrose synthetase (At4g02280) mRNA,
complete cds
Length = 2506
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 1265 gcaacaaggtttccgtcactatagttaccgatgat 1231
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 887 gtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagcccgaaagcctcg 946
|||||||| || || || ||||| ||||| || || || ||||| || || |||||||||
Sbjct: 2084 gtggcaaaagtcgggagcccgcaagtcatcgcttccactaccgtaagtccaaaagcctcg 2025
Query: 947 tagaaagcaggctg 960
||||| ||||||||
Sbjct: 2024 tagaacgcaggctg 2011
>emb|AX507720.1| Sequence 2415 from Patent WO0216655
Length = 2430
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 1265 gcaacaaggtttccgtcactatagttaccgatgat 1231
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 887 gtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagcccgaaagcctcg 946
|||||||| || || || ||||| ||||| || || || ||||| || || |||||||||
Sbjct: 2084 gtggcaaaagtcgggagcccgcaagtcatcgcttccactaccgtaagtccaaaagcctcg 2025
Query: 947 tagaaagcaggctg 960
||||| ||||||||
Sbjct: 2024 tagaacgcaggctg 2011
>emb|BX828217.1|CNS0A2C8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH64ZE09 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2686
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 1326 gcaacaaggtttccgtcactatagttaccgatgat 1292
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 887 gtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagcccgaaagcctcg 946
|||||||| || || || ||||| ||||| || || || ||||| || || |||||||||
Sbjct: 2145 gtggcaaaagtcgggagcccgcaagtcatcgcttccactaccgtaagtccaaaagcctcg 2086
Query: 947 tagaaagcaggctg 960
||||| ||||||||
Sbjct: 2085 tagaacgcaggctg 2072
>emb|AJ270058.1| Arabidopsis thaliana DNA chromosome 4, short arm
Length = 3052119
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 995656 gcaacaaggtttccgtcactatagttaccgatgat 995622
>gb|AF075597.1|T2H3 Arabidopsis thaliana BAC T2H3
Length = 48689
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 19782 gcaacaaggtttccgtcactatagttaccgatgat 19816
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
Length = 194892
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 32496 gcaacaaggtttccgtcactatagttaccgatgat 32462
>ref|NM_116461.2| Arabidopsis thaliana UDP-glycosyltransferase/ sucrose synthase/
transferase, transferring glycosyl groups AT4G02280 mRNA,
complete cds
Length = 2913
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 1504 gcaacaaggtttccgtcactatagttaccgatgat 1470
Score = 44.1 bits (22), Expect = 0.15
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 887 gtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagcccgaaagcctcg 946
|||||||| || || || ||||| ||||| || || || ||||| || || |||||||||
Sbjct: 2323 gtggcaaaagtcgggagcccgcaagtcatcgcttccactaccgtaagtccaaaagcctcg 2264
Query: 947 tagaaagcaggctg 960
||||| ||||||||
Sbjct: 2263 tagaacgcaggctg 2250
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1703 gcaacaaggtttccgtcactgtagtttccgatgat 1737
|||||||||||||||||||| ||||| ||||||||
Sbjct: 996846 gcaacaaggtttccgtcactatagttaccgatgat 996812
>emb|AJ838722.1| Arabidopsis thaliana T-DNA flanking sequence, left border, clone
401C04
Length = 479
Score = 52.0 bits (26), Expect = 6e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1631 gggtacttagttttctcaagcgcatgggcaatggtaca 1668
|||||||| ||||||||||| ||||| |||||||||||
Sbjct: 469 gggtactttgttttctcaagagcatgagcaatggtaca 432
>gb|BE528992.1|BE528992 M73G23STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600038192R1 5', mRNA sequence
Length = 240
Score = 50.1 bits (25), Expect = 0.002
Identities = 97/121 (80%)
Strand = Plus / Minus
Query: 2045 atgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaa 2104
|||||||||||||| || || || ||||| |||||||||||| ||||| | ||||||
Sbjct: 153 atgtagacaacctgtccaccagtatcaggcagacccaagacattggcttggccaaagtaa 94
Query: 2105 ccatgaggggagaggataacgacattgaacaccatggggatcgttccaaggaacttctcc 2164
||||| || || | || || |||||||||||||| || ||| |||| || ||| |||||
Sbjct: 93 ccatgcggagacaaaatcacaacattgaacaccataggaatccttcctagaaacgtctcc 34
Query: 2165 a 2165
|
Sbjct: 33 a 33
>gb|BE529221.1|BE529221 M73B17STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600038465R1 5', mRNA sequence
Length = 258
Score = 50.1 bits (25), Expect = 0.002
Identities = 97/121 (80%)
Strand = Plus / Minus
Query: 2045 atgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaa 2104
|||||||||||||| || || || ||||| |||||||||||| ||||| | ||||||
Sbjct: 185 atgtagacaacctgtccaccagtatcaggcagacccaagacattggcttggccaaagtaa 126
Query: 2105 ccatgaggggagaggataacgacattgaacaccatggggatcgttccaaggaacttctcc 2164
||||| || || | || || |||||||||||||| || ||| |||| || ||| |||||
Sbjct: 125 ccatgcggagacaaaatcacaacattgaacaccataggaatccttcctagaaacgtctcc 66
Query: 2165 a 2165
|
Sbjct: 65 a 65
>gb|BE529614.1|BE529614 M75M07STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600038931R1 5', mRNA sequence
Length = 275
Score = 50.1 bits (25), Expect = 0.002
Identities = 97/121 (80%)
Strand = Plus / Minus
Query: 2045 atgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaa 2104
|||||||||||||| || || || ||||| |||||||||||| ||||| | ||||||
Sbjct: 143 atgtagacaacctgtccaccagtatcaggcagacccaagacattggcttggccaaagtaa 84
Query: 2105 ccatgaggggagaggataacgacattgaacaccatggggatcgttccaaggaacttctcc 2164
||||| || || | || || |||||||||||||| || ||| |||| || ||| |||||
Sbjct: 83 ccatgcggagacaaaatcacaacattgaacaccataggaatccttcctagaaacgtctcc 24
Query: 2165 a 2165
|
Sbjct: 23 a 23
>gb|BE530300.1|BE530300 M77G19STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600039776R1 5', mRNA sequence
Length = 235
Score = 50.1 bits (25), Expect = 0.002
Identities = 97/121 (80%)
Strand = Plus / Minus
Query: 2045 atgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaa 2104
|||||||||||||| || || || ||||| |||||||||||| ||||| | ||||||
Sbjct: 168 atgtagacaacctgtccaccagtatcaggcagacccaagacattggcttggccaaagtaa 109
Query: 2105 ccatgaggggagaggataacgacattgaacaccatggggatcgttccaaggaacttctcc 2164
||||| || || | || || |||||||||||||| || ||| |||| || ||| |||||
Sbjct: 108 ccatgcggagacaaaatcacaacattgaacaccataggaatccttcctagaaacgtctcc 49
Query: 2165 a 2165
|
Sbjct: 48 a 48
>gb|BE521064.1|BE521064 M16F6STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M16F6 5', mRNA sequence
Length = 462
Score = 48.1 bits (24), Expect = 0.010
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 1421 acatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcg 1480
|||||||| || || ||||| ||||| || |||||||| ||||| || |||| ||||
Sbjct: 300 acatcaattccatgaacaactcggtaaagaccaggcatagtgaaagctgtgtggctctcg 241
Query: 1481 tactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaag 1540
|| || || || ||| |||| |||| || ||||||||| | || ||||||||||||||
Sbjct: 240 tattgcccaacattgttcttgcttcccgcaatctcttggtatgtgctggtgatgatgaaa 181
Query: 1541 tcggcatggttcattgcaat 1560
||||||| ||||| |||||
Sbjct: 180 tcggcattattcatggcaat 161
>gb|AV783221.1|AV783221 AV783221 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-07-J05 3', mRNA
sequence
Length = 697
Score = 46.1 bits (23), Expect = 0.038
Identities = 122/155 (78%)
Strand = Plus / Plus
Query: 908 caggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaag 967
|||||||| |||||||| || |||| ||| || || || || | |||||||||||| ||
Sbjct: 504 caggtcatagcctcaacaacagtcaacccaaaggcttcataaagagcaggctgcacaaat 563
Query: 968 gcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgg 1027
|| || || ||||| || ||||| ||||| ||||| ||||| | || | |||||||||
Sbjct: 564 gcacctttagtgtcacatatgtaacggtaaagctcaccgtttctcactctgttcatctgt 623
Query: 1028 gcggagatccagcggatgtgcccgttcaggttgta 1062
| |||||||| |||| |||||||| || |||||
Sbjct: 624 gaagagatccatcggaattgcccgttgagtttgta 658
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,291,926
Number of Sequences: 1013581
Number of extensions: 1291926
Number of successful extensions: 93005
Number of sequences better than 0.5: 55
Number of HSP's better than 0.5 without gapping: 51
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 89521
Number of HSP's gapped (non-prelim): 3443
length of query: 3202
length of database: 908,940,872
effective HSP length: 21
effective length of query: 3181
effective length of database: 887,655,671
effective search space: 2823632689451
effective search space used: 2823632689451
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)