BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.130
(860 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA597749.1|AA597749 29333 Lambda-PRL2 Arabidopsis thalia... 194 2e-047
gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA... 194 2e-047
gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA... 194 2e-047
gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA... 194 2e-047
gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana ... 194 2e-047
gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana ... 194 2e-047
gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf A... 194 2e-047
gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower... 194 2e-047
gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower... 194 2e-047
gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots ... 194 2e-047
gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots ... 194 2e-047
gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots ... 194 2e-047
gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots ... 194 2e-047
gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green ... 194 2e-047
gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana... 194 2e-047
gb|BP564615.1|BP564615 BP564615 RAFL14 Arabidopsis thaliana... 194 2e-047
gb|BP570282.1|BP570282 BP570282 RAFL14 Arabidopsis thaliana... 194 2e-047
gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana... 194 2e-047
gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana... 194 2e-047
gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana... 194 2e-047
gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana... 194 2e-047
gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana... 194 2e-047
gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana... 194 2e-047
gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana... 194 2e-047
gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana... 194 2e-047
gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana... 194 2e-047
gb|BP638880.1|BP638880 BP638880 RAFL19 Arabidopsis thaliana... 194 2e-047
gb|BP644028.1|BP644028 BP644028 RAFL19 Arabidopsis thaliana... 194 2e-047
gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana ... 194 2e-047
gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana ... 194 2e-047
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 194 2e-047
gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 194 2e-047
gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 194 2e-047
gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsi... 194 2e-047
emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cD... 194 2e-047
emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRN... 194 2e-047
emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and... 194 2e-047
ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROT... 194 2e-047
ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL P... 194 2e-047
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 194 2e-047
gb|AV814593.1|AV814593 AV814593 RAFL9 Arabidopsis thaliana ... 192 7e-047
gb|BP671919.1|BP671919 BP671919 RAFL21 Arabidopsis thaliana... 192 7e-047
gb|BP566825.1|BP566825 BP566825 RAFL14 Arabidopsis thaliana... 186 4e-045
gb|BP583991.1|BP583991 BP583991 RAFL14 Arabidopsis thaliana... 186 4e-045
gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana... 186 4e-045
gb|BP648711.1|BP648711 BP648711 RAFL19 Arabidopsis thaliana... 186 4e-045
gb|BP651032.1|BP651032 BP651032 RAFL19 Arabidopsis thaliana... 186 4e-045
emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal pr... 186 4e-045
gb|AV790069.1|AV790069 AV790069 RAFL6 Arabidopsis thaliana ... 184 2e-044
gb|BP624306.1|BP624306 BP624306 RAFL17 Arabidopsis thaliana... 184 2e-044
gb|BP632135.1|BP632135 BP632135 RAFL17 Arabidopsis thaliana... 184 2e-044
gb|BP623778.1|BP623778 BP623778 RAFL17 Arabidopsis thaliana... 182 7e-044
gb|AA712740.1|AA712740 32299 Lambda-PRL2 Arabidopsis thalia... 180 3e-043
gb|BP577273.1|BP577273 BP577273 RAFL14 Arabidopsis thaliana... 180 3e-043
gb|BP646287.1|BP646287 BP646287 RAFL19 Arabidopsis thaliana... 180 3e-043
gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid... 178 1e-042
gb|BP564344.1|BP564344 BP564344 RAFL14 Arabidopsis thaliana... 178 1e-042
gb|BP577470.1|BP577470 BP577470 RAFL14 Arabidopsis thaliana... 178 1e-042
gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana... 178 1e-042
gb|BP639587.1|BP639587 BP639587 RAFL19 Arabidopsis thaliana... 178 1e-042
gb|BP650819.1|BP650819 BP650819 RAFL19 Arabidopsis thaliana... 178 1e-042
gb|BP625067.1|BP625067 BP625067 RAFL17 Arabidopsis thaliana... 176 4e-042
gb|BP644385.1|BP644385 BP644385 RAFL19 Arabidopsis thaliana... 176 4e-042
gb|AV787809.1|AV787809 AV787809 RAFL6 Arabidopsis thaliana ... 172 6e-041
gb|BP644772.1|BP644772 BP644772 RAFL19 Arabidopsis thaliana... 172 6e-041
gb|BP647548.1|BP647548 BP647548 RAFL19 Arabidopsis thaliana... 172 6e-041
gb|BP640396.1|BP640396 BP640396 RAFL19 Arabidopsis thaliana... 170 3e-040
gb|BP656135.1|BP656135 BP656135 RAFL19 Arabidopsis thaliana... 170 3e-040
gb|BP657150.1|BP657150 BP657150 RAFL19 Arabidopsis thaliana... 170 3e-040
gb|BP669875.1|BP669875 BP669875 RAFL21 Arabidopsis thaliana... 170 3e-040
gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA... 168 1e-039
gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana ... 168 1e-039
gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots ... 168 1e-039
gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots ... 168 1e-039
gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots ... 168 1e-039
gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots ... 168 1e-039
gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots ... 168 1e-039
gb|BP626011.1|BP626011 BP626011 RAFL17 Arabidopsis thaliana... 168 1e-039
gb|AY050966.1| Arabidopsis thaliana putative ribosomal prot... 168 1e-039
gb|AY096616.1| Arabidopsis thaliana putative ribosomal prot... 168 1e-039
gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complet... 168 1e-039
ref|NM_120988.2| Arabidopsis thaliana structural constituen... 168 1e-039
gb|BP590157.1|BP590157 BP590157 RAFL15 Arabidopsis thaliana... 167 4e-039
gb|BP642003.1|BP642003 BP642003 RAFL19 Arabidopsis thaliana... 165 2e-038
gb|T21856.1|T21856 3864 Lambda-PRL2 Arabidopsis thaliana cD... 163 6e-038
gb|BP628741.1|BP628741 BP628741 RAFL17 Arabidopsis thaliana... 163 6e-038
gb|BP630049.1|BP630049 BP630049 RAFL17 Arabidopsis thaliana... 163 6e-038
gb|AV535553.1|AV535553 AV535553 Arabidopsis thaliana flower... 161 2e-037
gb|BP566550.1|BP566550 BP566550 RAFL14 Arabidopsis thaliana... 161 2e-037
gb|BP592451.1|BP592451 BP592451 RAFL15 Arabidopsis thaliana... 161 2e-037
gb|BP632732.1|BP632732 BP632732 RAFL17 Arabidopsis thaliana... 161 2e-037
gb|BP663835.1|BP663835 BP663835 RAFL21 Arabidopsis thaliana... 161 2e-037
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 161 2e-037
emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5... 161 2e-037
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 161 2e-037
gb|BZ769940.1|BZ769940 SALK_142874.53.50.x Arabidopsis thal... 159 1e-036
gb|AV794154.1|AV794154 AV794154 RAFL8 Arabidopsis thaliana ... 159 1e-036
gb|CD531488.1|CD531488 10P20 Arabidopsis Leaf Senescence Li... 155 2e-035
gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots ... 153 6e-035
gb|BP642920.1|BP642920 BP642920 RAFL19 Arabidopsis thaliana... 153 6e-035
gb|BP592430.1|BP592430 BP592430 RAFL15 Arabidopsis thaliana... 151 2e-034
gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA... 149 9e-034
gb|CB261315.1|CB261315 08-E9573-012-004-P02-T7R MPIZ-ADIS-0... 147 4e-033
gb|CB261515.1|CB261515 32-E020823-012-004-P02q-T7R MPIZ-ADI... 147 4e-033
gb|BP648892.1|BP648892 BP648892 RAFL19 Arabidopsis thaliana... 147 4e-033
gb|Z17791.1|Z17791 ATTS0365 Gif-SeedA+B Arabidopsis thalian... 147 4e-033
gb|BP670504.1|BP670504 BP670504 RAFL21 Arabidopsis thaliana... 139 9e-031
gb|AV559935.1|AV559935 AV559935 Arabidopsis thaliana green ... 137 4e-030
gb|BP637705.1|BP637705 BP637705 RAFL19 Arabidopsis thaliana... 135 1e-029
dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosom... 135 1e-029
ref|NM_123730.1| Arabidopsis thaliana structural constituen... 135 1e-029
gb|AQ956828.1|AQ956828 LERAM31TF LERA Arabidopsis thaliana ... 129 9e-028
gb|AQ956829.1|AQ956829 LERAM31TR LERA Arabidopsis thaliana ... 129 9e-028
gb|AV535648.1|AV535648 AV535648 Arabidopsis thaliana flower... 129 9e-028
gb|BP581489.1|BP581489 BP581489 RAFL14 Arabidopsis thaliana... 129 9e-028
gb|BP569334.1|BP569334 BP569334 RAFL14 Arabidopsis thaliana... 125 1e-026
gb|AA713022.1|AA713022 32584 Lambda-PRL2 Arabidopsis thalia... 119 8e-025
gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana c... 113 5e-023
gb|AV533902.1|AV533902 AV533902 Arabidopsis thaliana flower... 111 2e-022
gb|BH214207.1|BH214207 SALK_010406 Arabidopsis thaliana TDN... 107 3e-021
gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, compl... 107 3e-021
gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State cl... 100 8e-019
gb|BP853164.1|BP853164 BP853164 RAFL21 Arabidopsis thaliana... 100 8e-019
ref|NM_120986.2| Arabidopsis thaliana structural constituen... 100 8e-019
gb|BP567001.1|BP567001 BP567001 RAFL14 Arabidopsis thaliana... 96 1e-017
gb|BP565113.1|BP565113 BP565113 RAFL14 Arabidopsis thaliana... 94 5e-017
gb|AV555142.1|AV555142 AV555142 Arabidopsis thaliana green ... 92 2e-016
gb|BP654930.1|BP654930 BP654930 RAFL19 Arabidopsis thaliana... 90 7e-016
gb|BP641726.1|BP641726 BP641726 RAFL19 Arabidopsis thaliana... 86 1e-014
gb|BH251399.1|BH251399 SALK_011527 Arabidopsis thaliana TDN... 82 2e-013
gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana... 82 2e-013
emb|AJ553533.1|ATH553533 Arabidopsis thaliana T-DNA flankin... 82 2e-013
gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complet... 82 2e-013
ref|NM_120987.2| Arabidopsis thaliana structural constituen... 82 2e-013
gb|N65110.1|N65110 20150 Lambda-PRL2 Arabidopsis thaliana c... 80 7e-013
gb|BP836703.1|BP836703 BP836703 RAFL19 Arabidopsis thaliana... 80 7e-013
gb|BP805620.1|BP805620 BP805620 RAFL16 Arabidopsis thaliana... 74 4e-011
emb|AL755805.1| Arabidopsis thaliana T-DNA flanking sequenc... 72 2e-010
emb|AL755807.1| Arabidopsis thaliana T-DNA flanking sequenc... 72 2e-010
gb|BP596175.1|BP596175 BP596175 RAFL15 Arabidopsis thaliana... 72 2e-010
gb|BP854001.1|BP854001 BP854001 RAFL21 Arabidopsis thaliana... 70 7e-010
gb|BP827322.1|BP827322 BP827322 RAFL19 Arabidopsis thaliana... 68 3e-009
gb|BP844755.1|BP844755 BP844755 RAFL21 Arabidopsis thaliana... 66 1e-008
gb|AV536598.1|AV536598 AV536598 Arabidopsis thaliana liquid... 64 4e-008
gb|BP849184.1|BP849184 BP849184 RAFL21 Arabidopsis thaliana... 64 4e-008
dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosom... 64 4e-008
gb|DQ056736.1| Arabidopsis thaliana putative 40S ribosomal ... 64 4e-008
ref|NM_125701.1| Arabidopsis thaliana structural constituen... 64 4e-008
emb|AL083094.1|CNS00OE0 Arabidopsis thaliana genome survey ... 62 2e-007
gb|BP865592.1|BP865592 BP865592 RAFL21 Arabidopsis thaliana... 62 2e-007
gb|BZ761659.1|BZ761659 SALK_074986.53.30.x Arabidopsis thal... 60 7e-007
gb|BP815278.1|BP815278 BP815278 RAFL19 Arabidopsis thaliana... 60 7e-007
gb|BP855680.1|BP855680 BP855680 RAFL21 Arabidopsis thaliana... 60 7e-007
gb|BZ292978.1|BZ292978 SALK_129050.48.35.x Arabidopsis thal... 58 3e-006
gb|R29788.1|R29788 12393 Lambda-PRL2 Arabidopsis thaliana c... 56 1e-005
gb|BP831621.1|BP831621 BP831621 RAFL19 Arabidopsis thaliana... 56 1e-005
gb|BZ764832.1|BZ764832 SALK_127097.45.65.n Arabidopsis thal... 54 4e-005
gb|AU226581.1|AU226581 AU226581 RAFL14 Arabidopsis thaliana... 54 4e-005
gb|BP797475.1|BP797475 BP797475 RAFL14 Arabidopsis thaliana... 54 4e-005
gb|BP799546.1|BP799546 BP799546 RAFL14 Arabidopsis thaliana... 54 4e-005
gb|BP812124.1|BP812124 BP812124 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP815011.1|BP815011 BP815011 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP832815.1|BP832815 BP832815 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP840222.1|BP840222 BP840222 RAFL19 Arabidopsis thaliana... 54 4e-005
gb|BP853893.1|BP853893 BP853893 RAFL21 Arabidopsis thaliana... 54 4e-005
gb|BP818160.1|BP818160 BP818160 RAFL19 Arabidopsis thaliana... 52 2e-004
emb|BX003147.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 6e-004
gb|CB260534.1|CB260534 87-E9572-012-004-N21-T7R MPIZ-ADIS-0... 50 6e-004
gb|BP585087.1|BP585087 BP585087 RAFL15 Arabidopsis thaliana... 50 6e-004
gb|BP803741.1|BP803741 BP803741 RAFL14 Arabidopsis thaliana... 50 6e-004
gb|AV552702.1|AV552702 AV552702 Arabidopsis thaliana roots ... 48 0.003
gb|BP858904.1|BP858904 BP858904 RAFL21 Arabidopsis thaliana... 48 0.003
gb|BP869065.1|BP869065 BP869065 RAFL21 Arabidopsis thaliana... 48 0.003
gb|AC010164.2|AC010164 Arabidopsis thaliana chromosome I BA... 48 0.003
gb|AC022288.5|AC022288 Arabidopsis thaliana chromosome 1 BA... 48 0.003
ref|NM_103107.1| Arabidopsis thaliana structural constituen... 48 0.003
gb|BP799430.1|BP799430 BP799430 RAFL14 Arabidopsis thaliana... 44 0.039
gb|BP799490.1|BP799490 BP799490 RAFL14 Arabidopsis thaliana... 44 0.039
>gb|AA597749.1|AA597749 29333 Lambda-PRL2 Arabidopsis thaliana cDNA clone 225G7T7, mRNA
sequence
Length = 452
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| ||||||||||||||||||||||| |||| || |||||||| |||||
Sbjct: 91 aacatgatcatcgtccctgagatgattggaagcatcattggagtgtacaacggaaagact 150
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| |||||||| || |||
Sbjct: 151 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttttctatc 210
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 211 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 260
>gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 758
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 360 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 419
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 420 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 479
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 480 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 529
>gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 709
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 320 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 379
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 380 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 439
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 440 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 489
>gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 729
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 444 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 385
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 384 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 325
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 324 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 275
>gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 3',
mRNA sequence
Length = 683
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 374 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 315
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 314 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 255
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 254 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 205
>gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 5',
mRNA sequence
Length = 649
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 357 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 416
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 417 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 476
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 477 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 526
>gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 665
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 305 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 364
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 365 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 424
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 425 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 474
>gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB010d01F 3', mRNA sequence
Length = 508
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 432 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 373
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 372 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 313
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 312 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 263
>gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB035a04F 3', mRNA sequence
Length = 508
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ11b11F 3', mRNA sequence
Length = 620
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 376 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 317
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 316 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 257
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 256 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 207
Score = 121 bits (61), Expect = 2e-025
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 418 tcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatct 477
|||||| |||||| ||||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct: 191 tcaacctggttgaaatcaagcctgagatgattggtcactacctggctgagttctctatct 132
Query: 478 cctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 131 catacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 83
Score = 56.0 bits (28), Expect = 1e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 417 ttcaaccaggttgagatcaagcctgaga 444
||||||||||||||||||||||||||||
Sbjct: 178 ttcaaccaggttgagatcaagcctgaga 205
>gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ120a09F 3', mRNA sequence
Length = 597
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02F 3', mRNA sequence
Length = 651
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 371 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 312
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 311 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 252
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 251 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 202
>gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02R 5', mRNA sequence
Length = 575
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 325 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 384
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 385 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 444
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 445 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 494
>gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227f09F 3', mRNA sequence
Length = 596
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 443 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 384
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 383 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 324
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 323 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 274
>gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-01-O20 3',
mRNA sequence
Length = 431
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 379 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 320
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 319 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 260
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 259 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 210
>gb|BP564615.1|BP564615 BP564615 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-08-I18 3',
mRNA sequence
Length = 435
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 431 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 372
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 371 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 312
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 311 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 262
>gb|BP570282.1|BP570282 BP570282 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-72-B04 3',
mRNA sequence
Length = 476
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-I11 3',
mRNA sequence
Length = 461
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-N16 3',
mRNA sequence
Length = 455
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 310 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 251
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 250 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 191
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 190 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 141
>gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-46-J23 3',
mRNA sequence
Length = 423
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 310 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 251
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 250 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 191
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 190 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 141
>gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-23-J06 3',
mRNA sequence
Length = 460
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-30-N09 3',
mRNA sequence
Length = 427
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 380 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 321
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 320 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 261
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 260 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 211
>gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-40-A07 3',
mRNA sequence
Length = 424
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-76-N23 3',
mRNA sequence
Length = 429
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 299 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 240
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 239 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 180
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 179 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 130
>gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-33-M09 3',
mRNA sequence
Length = 451
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 306 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 247
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 246 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 187
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 186 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 137
>gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-09-B11 3',
mRNA sequence
Length = 415
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|BP638880.1|BP638880 BP638880 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-45-E02 3',
mRNA sequence
Length = 383
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|BP644028.1|BP644028 BP644028 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-64-A19 3',
mRNA sequence
Length = 379
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 206
>gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-04-I04 3',
mRNA sequence
Length = 429
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 369 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 310
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 309 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 250
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 249 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 200
>gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-37-E15 3',
mRNA sequence
Length = 418
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 369 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 310
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 309 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 250
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 249 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 200
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 1142121 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 1142062
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 1142061 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 1142002
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 1142001 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 1141952
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 171 gtcgacctagatgcgcttctcgacatgtccac 202
||||| || |||||||||||||||||||||||
Sbjct: 12296917 gtcgatctcgatgcgcttctcgacatgtccac 12296886
>gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 729
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 356 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 415
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 416 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 475
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 476 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 525
>gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 459
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 265 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 324
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 325 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 384
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 385 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 434
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 107527
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 91158 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 91217
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 91218 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 91277
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 91278 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 91327
>emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL20ZD06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 695
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 320 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 379
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 380 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 439
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 440 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 489
>emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRNA, complete CDS
Length = 668
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 294 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 353
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 354 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 413
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 414 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 463
>emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and ribosomal protein S15 gene,
complete CDS
Length = 2780
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 2034 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 2093
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 2094 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 2153
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 2154 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 2203
>ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.1 mRNA, complete cds
Length = 798
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 356 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 415
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 416 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 475
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 476 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 525
>ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.2 mRNA, complete cds
Length = 795
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 353 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 412
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 413 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 472
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 473 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 522
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 194 bits (98), Expect = 2e-047
Identities = 152/170 (89%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 1142045 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 1141986
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 1141985 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 1141926
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 1141925 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 1141876
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 171 gtcgacctagatgcgcttctcgacatgtccac 202
||||| || |||||||||||||||||||||||
Sbjct: 12288121 gtcgatctcgatgcgcttctcgacatgtccac 12288090
>gb|AV814593.1|AV814593 AV814593 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-83-I12 3',
mRNA sequence
Length = 409
Score = 192 bits (97), Expect = 7e-047
Identities = 151/169 (89%)
Strand = Plus / Minus
Query: 358 acatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacct 417
|||||||||| |||||||| |||||||||||||| |||| || |||||||| ||||| |
Sbjct: 409 acatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagactt 350
Query: 418 tcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatct 477
||||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct: 349 tcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatct 290
Query: 478 cctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 289 catacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 241
>gb|BP671919.1|BP671919 BP671919 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-42-E16 3',
mRNA sequence
Length = 424
Score = 192 bits (97), Expect = 7e-047
Identities = 151/169 (89%)
Strand = Plus / Minus
Query: 358 acatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacct 417
|||||||||| |||||||| |||||||||||||| |||| || |||||||| ||||| |
Sbjct: 368 acatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagactt 309
Query: 418 tcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatct 477
||||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct: 308 tcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatct 249
Query: 478 cctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 248 catacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 200
>gb|BP566825.1|BP566825 BP566825 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-55-H07 3',
mRNA sequence
Length = 411
Score = 186 bits (94), Expect = 4e-045
Identities = 151/170 (88%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| | | | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcacggtaggcctgttgttggtgctacccactc 206
>gb|BP583991.1|BP583991 BP583991 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-44-G03 3',
mRNA sequence
Length = 415
Score = 186 bits (94), Expect = 4e-045
Identities = 151/170 (88%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| || ||
Sbjct: 376 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaaaact 317
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 316 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 257
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 256 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 207
>gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-25-O18 3',
mRNA sequence
Length = 459
Score = 186 bits (94), Expect = 4e-045
Identities = 151/170 (88%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 304 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 245
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| | |
Sbjct: 244 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctacc 185
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 184 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 135
>gb|BP648711.1|BP648711 BP648711 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-10-M16 3',
mRNA sequence
Length = 385
Score = 186 bits (94), Expect = 4e-045
Identities = 151/170 (88%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 374 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 315
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 314 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 255
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| ||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 254 tcatacaagccggtcaagcacgttaggcctggtgttggtgctacccactc 205
>gb|BP651032.1|BP651032 BP651032 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-86-O18 3',
mRNA sequence
Length = 389
Score = 186 bits (94), Expect = 4e-045
Identities = 151/170 (88%)
Strand = Plus / Minus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| |||||||| |||||||||||||| |||| || |||||||| |||||
Sbjct: 375 aacatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagact 316
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 315 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 256
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||| ||| ||||| ||| | ||||| ||||||||
Sbjct: 255 tcatacaagccggtcaagcccggtaggcctggtgttggtgctacccactc 206
>emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal protein S15
Length = 694
Score = 186 bits (94), Expect = 4e-045
Identities = 151/170 (88%)
Strand = Plus / Plus
Query: 357 aacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacc 416
||||||||||| ||||||| |||||||| ||||| ||||||| |||||||| |||||
Sbjct: 326 aacatgatcatcctccctgaaatgattggcagcatcattggtgtttacaacggaaagact 385
Query: 417 ttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatc 476
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 386 ttcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatc 445
Query: 477 tcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|| |||||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 446 tcatacaagccggtcaagcacggtaggcctggtgttggtgctacccactc 495
>gb|AV790069.1|AV790069 AV790069 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-86-P18 3',
mRNA sequence
Length = 404
Score = 184 bits (93), Expect = 2e-044
Identities = 150/169 (88%)
Strand = Plus / Minus
Query: 358 acatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagacct 417
|||||||||| |||||||| |||||||||||||| |||| || |||||||| ||||| |
Sbjct: 401 acatgatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagactt 342
Query: 418 tcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatct 477
||||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct: 341 tcaaccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatct 282
Query: 478 cctacaagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
| |||||||||||||||||||| ||||| ||| | | ||| ||||||||
Sbjct: 281 catacaagccggtcaagcacggtaggcctggtgttgctgctacccactc 233
>gb|BP624306.1|BP624306 BP624306 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-39-L22 3',
mRNA sequence
Length = 426
Score = 184 bits (93), Expect = 2e-044
Identities = 147/165 (89%)
Strand = Plus / Minus
Query: 362 gatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaa 421
|||||| |||||||| |||||||||||||| |||| || |||||||| ||||| |||||
Sbjct: 426 gatcatcgtccctgaaatgattggaagcatcattggagtgtacaacggaaagactttcaa 367
Query: 422 ccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatctccta 481
||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||| ||
Sbjct: 366 ccaggttgagatcaagcctgagatgattggtcactacctggctgagttctctatctcata 307
Query: 482 caagccggtcaagcacggcaggcccggtatcggtgccacccactc 526
|||||||||||||||||| ||||| ||| | ||||| ||||||||
Sbjct: 306 caagccggtcaagcacggtaggcctggtgttggtgctacccactc 262
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 386,727
Number of Sequences: 1013581
Number of extensions: 386727
Number of successful extensions: 27576
Number of sequences better than 0.5: 178
Number of HSP's better than 0.5 without gapping: 179
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 26034
Number of HSP's gapped (non-prelim): 1412
length of query: 860
length of database: 908,940,872
effective HSP length: 20
effective length of query: 840
effective length of database: 888,669,252
effective search space: 746482171680
effective search space used: 746482171680
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)