BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 5351892.2.1 (466 letters) Database: /db/trembl-ebi/tmp/swall 1,165,242 sequences; 374,381,506 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sw|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase (EC ... 116 1e-25 sw|O81053|FUT2_ARATH Probable fucosyltransferase 2 (EC 2.4.1.-) ... 111 3e-24 sptrnew|AAO30064|AAO30064 Hypothetical protein. 110 5e-24 sptrnew|AAO00837|AAO00837 Hypothetical protein. 110 5e-24 sptrnew|AAM98135|AAM98135 Hypothetical protein. 110 5e-24 sw|Q9SWH5|FUT1_ARATH Galactoside 2-alpha-L-fucosyltransferase (E... 110 5e-24 sw|Q9XI78|FUT8_ARATH Probable fucosyltransferase 8 (EC 2.4.1.-) ... 86 2e-16 sw|Q9SJP6|FU10_ARATH Putative fucosyltransferase 10 (EC 2.4.1.-)... 86 2e-16 sw|Q9XI81|FUT7_ARATH Probable fucosyltransferase 7 (EC 2.4.1.-) ... 83 1e-15 sw|Q9SJP4|FUT5_ARATH Probable fucosyltransferase 5 (EC 2.4.1.-) ... 82 2e-15 sw|Q9SJP2|FUT4_ARATH Probable fucosyltransferase 4 (EC 2.4.1.-) ... 80 1e-14 sw|Q9XI77|FUT9_ARATH Probable fucosyltransferase 9 (EC 2.4.1.-) ... 79 2e-14 sw|Q9XI80|FUT6_ARATH Probable fucosyltransferase 6 (EC 2.4.1.-) ... 73 1e-12 sptrnew|AAP68320|AAP68320 At1g14080. 73 1e-12 sptr|Q8GUI5|Q8GUI5 Xyloglucan fucosyltransferase, putative. 73 1e-12 sw|Q9CA71|FUT3_ARATH Probable fucosyltransferase 3 (EC 2.4.1.-) ... 49 2e-05 sptr|Q97B84|Q97B84 Hypothetical protein TV0573. 33 0.96 sptr|Q9BTB5|Q9BTB5 MutS (E. coli) homolog 6. 32 2.8 sw|P52701|MSH6_HUMAN DNA mismatch repair protein MSH6 (MutS-alph... 32 2.8 sptrnew|EAA39300|EAA39300 GLP_532_27477_30575. 31 6.3 sptr|Q9WYE5|Q9WYE5 Oligopeptide ABC transporter, periplasmic oli... 30 8.2
>sw|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1). Length = 565 Score = 116 bits (290), Expect = 1e-25 Identities = 47/67 (70%), Positives = 56/67 (83%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPWI+ K EN P+PPC RAMS+EPCFH PFYDCKA++ TD G +VP+VRHCED+S Sbjct: 498 GLKPWILYKPENRTAPNPPCQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMS 557 Query: 192 WGLKIVD 212 WGLK+VD Sbjct: 558 WGLKLVD 564 >sw|O81053|FUT2_ARATH Probable fucosyltransferase 2 (EC 2.4.1.-) (AtFUT2). Length = 539 Score = 111 bits (278), Expect = 3e-24 Identities = 45/67 (67%), Positives = 54/67 (80%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GL+ WI+ K EN P+PPC RAMS +PCFH P+YDCKA+K TD G VVP+VRHCED+S Sbjct: 471 GLRAWILYKQENQTNPNPPCGRAMSPDPCFHAPPYYDCKAKKGTDTGNVVPHVRHCEDIS 530 Query: 192 WGLKIVD 212 WGLK+VD Sbjct: 531 WGLKLVD 537 >sptrnew|AAO30064|AAO30064 Hypothetical protein. Length = 558 Score = 110 bits (276), Expect = 5e-24 Identities = 45/66 (68%), Positives = 53/66 (80%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPWI+ + EN TPDP C RAMS+EPCFH PFYDCKA+ D G +VP+VRHCED+S Sbjct: 493 GLKPWILYRPENRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDIS 552 Query: 192 WGLKIV 209 WGLK+V Sbjct: 553 WGLKLV 558 >sptrnew|AAO00837|AAO00837 Hypothetical protein. Length = 558 Score = 110 bits (276), Expect = 5e-24 Identities = 45/66 (68%), Positives = 53/66 (80%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPWI+ + EN TPDP C RAMS+EPCFH PFYDCKA+ D G +VP+VRHCED+S Sbjct: 493 GLKPWILYRPENRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDIS 552 Query: 192 WGLKIV 209 WGLK+V Sbjct: 553 WGLKLV 558 >sptrnew|AAM98135|AAM98135 Hypothetical protein. Length = 558 Score = 110 bits (276), Expect = 5e-24 Identities = 45/66 (68%), Positives = 53/66 (80%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPWI+ + EN TPDP C RAMS+EPCFH PFYDCKA+ D G +VP+VRHCED+S Sbjct: 493 GLKPWILYRPENRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDIS 552 Query: 192 WGLKIV 209 WGLK+V Sbjct: 553 WGLKLV 558 >sw|Q9SWH5|FUT1_ARATH Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1). Length = 558 Score = 110 bits (276), Expect = 5e-24 Identities = 45/66 (68%), Positives = 53/66 (80%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPWI+ + EN TPDP C RAMS+EPCFH PFYDCKA+ D G +VP+VRHCED+S Sbjct: 493 GLKPWILYRPENRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDIS 552 Query: 192 WGLKIV 209 WGLK+V Sbjct: 553 WGLKLV 558 >sw|Q9XI78|FUT8_ARATH Probable fucosyltransferase 8 (EC 2.4.1.-) (AtFUT8). Length = 500 Score = 85.9 bits (211), Expect = 2e-16 Identities = 37/67 (55%), Positives = 49/67 (73%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPWI+ K +NH P+PPCVRA+S+EPCF +AP Y C+A+K + P+V +CED Sbjct: 436 GLKPWILYKPKNHTAPEPPCVRAVSMEPCFLRAPLYGCQAKK----VNITPFVMYCEDRI 491 Query: 192 WGLKIVD 212 GLK+VD Sbjct: 492 TGLKLVD 498 >sw|Q9SJP6|FU10_ARATH Putative fucosyltransferase 10 (EC 2.4.1.-) (AtFUT10) (Fragment). Length = 440 Score = 85.9 bits (211), Expect = 2e-16 Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 1/68 (1%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPW++ + N TP+PPCVR+ S+EPC+H P + C+A T+ GK++P+VRHCED+ Sbjct: 371 GLKPWLLYQPVNFTTPNPPCVRSKSMEPCYHTPPSHGCEADWGTNSGKILPFVRHCEDMM 430 Query: 192 W-GLKIVD 212 + GLK+ D Sbjct: 431 YGGLKLYD 438 >sw|Q9XI81|FUT7_ARATH Probable fucosyltransferase 7 (EC 2.4.1.-) (AtFUT7). Length = 526 Score = 82.8 bits (203), Expect = 1e-15 Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 1/70 (1%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV- 188 GLKPWI+ + +P+PPC R +S+EPCF P + C+A+K + K+VP+VRHCED+ Sbjct: 453 GLKPWILYTPKKFKSPNPPCGRVISMEPCFLTPPVHGCEAKKGINTAKIVPFVRHCEDLR 512 Query: 189 SWGLKIVDQT 218 +GLK+VD T Sbjct: 513 HYGLKLVDDT 522 >sw|Q9SJP4|FUT5_ARATH Probable fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5). Length = 533 Score = 82.4 bits (202), Expect = 2e-15 Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPW++ + N TP+PPCVR+ S+EPC+ P + C+A T+ GK++P+VRHCED+ Sbjct: 464 GLKPWLLYQPTNFTTPNPPCVRSKSMEPCYLTPPSHGCEADWGTNSGKILPFVRHCEDLI 523 Query: 192 W-GLKIVDQ 215 + GLK+ D+ Sbjct: 524 YGGLKLYDE 532 >sw|Q9SJP2|FUT4_ARATH Probable fucosyltransferase 4 (EC 2.4.1.-) (AtFUT4). Length = 503 Score = 79.7 bits (195), Expect = 1e-14 Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARK-DTDLGKVVPYVRHCEDV 188 GLKPW++ ++ PDPPCVR+ S+EPCF P + C+ T+ GKVVP+VR+CED+ Sbjct: 435 GLKPWLLYLPNDNKAPDPPCVRSTSMEPCFLTPPTHGCEPDAWGTESGKVVPFVRYCEDI 494 Query: 189 SWGLKIVDQ 215 WGLK+ D+ Sbjct: 495 -WGLKLFDE 502 >sw|Q9XI77|FUT9_ARATH Probable fucosyltransferase 9 (EC 2.4.1.-) (AtFUT9). Length = 435 Score = 79.0 bits (193), Expect = 2e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191 GLKPWI+ + + TP+PPCVRAMS+EPCF +AP + C+A+ K+ P+VR CED Sbjct: 368 GLKPWILYEPRDKKTPNPPCVRAMSMEPCFLRAPLHGCQAKTI----KIPPFVRICEDWK 423 Query: 192 WGLKIVD 212 GLK+VD Sbjct: 424 TGLKLVD 430 >sw|Q9XI80|FUT6_ARATH Probable fucosyltransferase 6 (EC 2.4.1.-) (AtFUT6). Length = 537 Score = 72.8 bits (177), Expect = 1e-12 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED-V 188 GLKPW++ + PDPPC+++ S++PC P + C+ T+ GKVVP+VRHCED Sbjct: 468 GLKPWLLYQPTGPTAPDPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 527 Query: 189 SWGLKIVDQ 215 + GLK+ D+ Sbjct: 528 NDGLKLFDE 536 >sptrnew|AAP68320|AAP68320 At1g14080. Length = 519 Score = 72.8 bits (177), Expect = 1e-12 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED-V 188 GLKPW++ + PDPPC+++ S++PC P + C+ T+ GKVVP+VRHCED Sbjct: 450 GLKPWLLYQPTGPTAPDPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 509 Query: 189 SWGLKIVDQ 215 + GLK+ D+ Sbjct: 510 NDGLKLFDE 518 >sptr|Q8GUI5|Q8GUI5 Xyloglucan fucosyltransferase, putative. Length = 519 Score = 72.8 bits (177), Expect = 1e-12 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED-V 188 GLKPW++ + PDPPC+++ S++PC P + C+ T+ GKVVP+VRHCED Sbjct: 450 GLKPWLLYQPTGPTAPDPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 509 Query: 189 SWGLKIVDQ 215 + GLK+ D+ Sbjct: 510 NDGLKLFDE 518 >sw|Q9CA71|FUT3_ARATH Probable fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3). Length = 493 Score = 49.3 bits (116), Expect = 2e-05 Identities = 20/39 (51%), Positives = 26/39 (66%) Frame = +3 Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCK 128 GLKPW++ K+EN +P CV+A SIEPC F+ CK Sbjct: 454 GLKPWVLNKAENGTAHEPYCVKARSIEPCSQATLFHGCK 492 >sptr|Q97B84|Q97B84 Hypothetical protein TV0573. Length = 381 Score = 33.5 bits (75), Expect = 0.96 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = -3 Query: 251 SPDQITATLQM-SLIYNLEP--PAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81 SP I +Q + I++L P PA + + R Y++ GVL R V GSL EA H Sbjct: 171 SPLDIMEKIQAEAFIFDLPPRMPASTINIDGEREYISVDGVLSRFTVYTGSLKEAEYSAH 230 >sptr|Q9BTB5|Q9BTB5 MutS (E. coli) homolog 6. Length = 1360 Score = 32.0 bits (71), Expect = 2.8 Identities = 24/79 (30%), Positives = 32/79 (40%) Frame = -2 Query: 462 FLSDDHIVNMFLFLLTSEDEQINGSVYQLSTLGSNTGGKEYILYGSFVSQXXXXXXXXNS 283 F DD I N L + E+EQ NG Y + G N GGK + + Q Sbjct: 1103 FFGDDFIPNDIL-IGCEEEEQENGKAYCVLVTGPNMGGK-----STLMRQAGLLAVMAQM 1156 Query: 282 SALVSKQVCRES*PDYSYT 226 V +VCR + D +T Sbjct: 1157 GCYVPAEVCRLTPIDRVFT 1175 >sw|P52701|MSH6_HUMAN DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa subunit) (G/T mismatch binding protein) (GTBP) (GTMBP) (P160). Length = 1360 Score = 32.0 bits (71), Expect = 2.8 Identities = 24/79 (30%), Positives = 32/79 (40%) Frame = -2 Query: 462 FLSDDHIVNMFLFLLTSEDEQINGSVYQLSTLGSNTGGKEYILYGSFVSQXXXXXXXXNS 283 F DD I N L + E+EQ NG Y + G N GGK + + Q Sbjct: 1103 FFGDDFIPNDIL-IGCEEEEQENGKAYCVLVTGPNMGGK-----STLMRQAGLLAVMAQM 1156 Query: 282 SALVSKQVCRES*PDYSYT 226 V +VCR + D +T Sbjct: 1157 GCYVPAEVCRLTPIDRVFT 1175 >sptrnew|EAA39300|EAA39300 GLP_532_27477_30575. Length = 1032 Score = 30.8 bits (68), Expect = 6.3 Identities = 17/52 (32%), Positives = 28/52 (53%) Frame = +2 Query: 38 VGEPRDARPTVRPRHVHRAVLPSSSLLRLQGEEGHRFGQGSALREALRGREL 193 VGE RDA+ +R R R + ++L L GE+ + S ++++G EL Sbjct: 246 VGEFRDAKREIRERGKRRIIHKVMNILNLNGEKAELSVERSLRLDSIQGSEL 297 >sptr|Q9WYE5|Q9WYE5 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein. Length = 660 Score = 30.4 bits (67), Expect = 8.2 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -3 Query: 188 HVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGHGADAR-WV 60 HV V+ Y QIGV + +E SL ++RL H DA+ WV Sbjct: 472 HVDVWTMVKEYWKQIGVRVEIENLERSLYDSRLSAHDFDAQAWV 515 Database: /db/trembl-ebi/tmp/swall Posted date: Jul 11, 2003 8:27 PM Number of letters in database: 374,381,506 Number of sequences in database: 1,165,242 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 289,237,810 Number of Sequences: 1165242 Number of extensions: 5115274 Number of successful extensions: 11693 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 11396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11675 length of database: 374,381,506 effective HSP length: 111 effective length of database: 245,039,644 effective search space used: 10536704692 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
S1: 41 (21.7 bits)