BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3923331.2.1
         (496 letters)

Database: /db/trembl-ebi/tmp/swall 
           1,165,242 sequences; 374,381,506 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

   sptr|Q9ST51|Q9ST51 Fuct c3 protein.                                   129  2e-29
   sptrnew|AAO00930|AAO00930 Putative fucosyltransferase.                125  2e-28
   sw|Q9FX97|FU12_ARATH Putative fucosyltransferase-like protein (F...   125  2e-28
   sw|Q9LJK1|FU11_ARATH Glycoprotein 3-alpha-L-fucosyltransferase A...   124  5e-28
   sptr|Q8L5D1|Q8L5D1 Alpha 1,3-fucosyltransferase (Fragment).           113  9e-25

>sptr|Q9ST51|Q9ST51 Fuct c3 protein.
          Length = 510

 Score =   bits (323), Expect = 2e-29
 Identities = 62/98 (63%), Positives = 78/98 (79%)
 Frame = -3

Query: 491 RERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIY 312
           RERGRF+ ESIY+RS  LTL A+++AV+ KF SLN VPVWK ERP  IRGG  LKLY+IY
Sbjct: 413 RERGRFEMESIYLRSSNLTLNAVKAAVVLKFTSLNLVPVWKTERPEVIRGGSALKLYKIY 472

Query: 311 PVGLTQRQALYGFRFRDDSELEQYIKDHPCAKLEVIFV 198
           P+GLTQRQALY F F+ D++   +++++P AK EVIFV
Sbjct: 473 PIGLTQRQALYTFSFKGDADFRSHLENNPYAKFEVIFV 510


>sptrnew|AAO00930|AAO00930 Putative fucosyltransferase.
          Length = 513

 Score =   bits (314), Expect = 2e-28
 Identities = 57/98 (58%), Positives = 77/98 (78%)
 Frame = -3

Query: 491 RERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIY 312
           RERGRF+ ES+++R   +T  ALESAVL KF+SL H  VWK ERP +++G  +LK++RIY
Sbjct: 416 RERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKELKIHRIY 475

Query: 311 PVGLTQRQALYGFRFRDDSELEQYIKDHPCAKLEVIFV 198
           P+GLTQRQALY F+F  +S L  +I+++PCAK EV+FV
Sbjct: 476 PLGLTQRQALYNFKFEGNSSLSSHIQNNPCAKFEVVFV 513


>sw|Q9FX97|FU12_ARATH Putative fucosyltransferase-like protein
           (FucTB) (FucT2) (AtFUT12).
          Length = 513

 Score =   bits (314), Expect = 2e-28
 Identities = 57/98 (58%), Positives = 77/98 (78%)
 Frame = -3

Query: 491 RERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIY 312
           RERGRF+ ES+++R   +T  ALESAVL KF+SL H  VWK ERP +++G  +LK++RIY
Sbjct: 416 RERGRFEMESVFLRGKSVTQEALESAVLAKFKSLKHEAVWKKERPGNLKGDKELKIHRIY 475

Query: 311 PVGLTQRQALYGFRFRDDSELEQYIKDHPCAKLEVIFV 198
           P+GLTQRQALY F+F  +S L  +I+++PCAK EV+FV
Sbjct: 476 PLGLTQRQALYNFKFEGNSSLSSHIQNNPCAKFEVVFV 513


>sw|Q9LJK1|FU11_ARATH Glycoprotein 3-alpha-L-fucosyltransferase A
           (EC 2.4.1.214) (Core alpha-(1,3)-fucosyltransferase)
           (Fuc-T C3) (FucTA) (FucT1) (AtFUT11).
          Length = 501

 Score =   bits (311), Expect = 5e-28
 Identities = 58/98 (59%), Positives = 74/98 (75%)
 Frame = -3

Query: 491 RERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIY 312
           RERGRF  ESI+++ G LTL ALESAVL KF SL + P+WK ERP S+RG   L+++ IY
Sbjct: 404 RERGRFDMESIFLKDGNLTLEALESAVLAKFMSLRYEPIWKKERPASLRGDGKLRVHGIY 463

Query: 311 PVGLTQRQALYGFRFRDDSELEQYIKDHPCAKLEVIFV 198
           P+GLTQRQALY F+F  +S L  +I+ +PC K EV+FV
Sbjct: 464 PIGLTQRQALYNFKFEGNSSLSTHIQRNPCPKFEVVFV 501


>sptr|Q8L5D1|Q8L5D1 Alpha 1,3-fucosyltransferase (Fragment).
          Length = 418

 Score =   bits (283), Expect = 9e-25
 Identities = 50/98 (51%), Positives = 71/98 (72%)
 Frame = -3

Query: 491 RERGRFKSESIYMRSGQLTLGALESAVLGKFRSLNHVPVWKDERPPSIRGGDDLKLYRIY 312
           RERGRF+ ES+++   +L+L  L+  V+ KF +L HVP+WK ERP  IRG  DL++Y+IY
Sbjct: 321 RERGRFEMESVFIEGSKLSLAHLKQVVVDKFTALKHVPIWKTERPEVIRGNSDLRIYKIY 380

Query: 311 PVGLTQRQALYGFRFRDDSELEQYIKDHPCAKLEVIFV 198
           PVGLTQR+ALY + F  D  ++  ++  PC +LEV+FV
Sbjct: 381 PVGLTQREALYTWDFGGDKGIKAMVQKQPCLQLEVVFV 418


  Database: /db/trembl-ebi/tmp/swall
    Posted date:  Jul 11, 2003  8:27 PM
  Number of letters in database: 374,381,506
  Number of sequences in database:  1,165,242
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 335,585,025
Number of Sequences: 1165242
Number of extensions: 6469096
Number of successful extensions: 13638
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13638
length of database: 374,381,506
effective HSP length: 113
effective length of database: 242,709,160
effective search space used: 12378167160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)