BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619346.2.2
(1471 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q86I41|Q86I41 Hypothetical protein. 35 2.1
sw|P37938|MAZ4_SCHCO Mating-type protein A-alpha Z4. 35 2.1
sptr|Q86AF5|Q86AF5 Similar to plasmodium falciparum. protein kin... 35 2.1
sptr|Q8I5B3|Q8I5B3 Hypothetical protein. 35 3.6
sptr|Q8IES7|Q8IES7 Hypothetical protein. 34 4.8
sptr|Q93325|Q93325 C33G3.1 protein. 33 8.1
sptr|Q8STF6|Q8STF6 C33G3.1b protein. 33 8.1
sptr|Q9VJP3|Q9VJP3 CG18482 protein (Hypothetical protein). 33 8.1
sptr|O96256|O96256 Hypothetical protein. 33 8.1
>sptr|Q86I41|Q86I41 Hypothetical protein.
Length = 964
Score = 35.4 bits (80), Expect = 2.1
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 299 PSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQSH 421
PS N N+N Q+Q+ N NQ+ N NQ + NQN NQ+H
Sbjct: 209 PSTNQNQN--QNQNQNQNQNQNQNQNQNQNQNQNQNQNQNH 247
Score = 34.3 bits (77), Expect = 4.8
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 302 SQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
+QN N+N Q+Q+ N NQ+ T N NQ + QN NQ+
Sbjct: 347 NQNQNQNQNQNQTQNQNQNQTQTQNQNQTQNQTQNQNQN 385
>sw|P37938|MAZ4_SCHCO Mating-type protein A-alpha Z4.
Length = 940
Score = 35.4 bits (80), Expect = 2.1
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 35 EEDTPQS*QANNLQEQQEWRRRVASLAFS---SPCFWQEWPLPPPSTKRLLPASGLATAR 205
+E T QS A++ ++ ++R+ L+ P W ++ L PP+ RL P+ GL +
Sbjct: 705 DETTTQSTSASSSRDTTSQQKRMPPLSIDPRFDPALWSKYDLSPPADGRLHPSDGLRPSA 764
Query: 206 VSRASMDV 229
+DV
Sbjct: 765 FVPTKLDV 772
>sptr|Q86AF5|Q86AF5 Similar to plasmodium falciparum. protein kinase,
putative.
Length = 1918
Score = 35.4 bits (80), Expect = 2.1
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +2
Query: 299 PSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQ 415
PSQN RN Q+ + N NQ+P N NQ P NQNPNQ
Sbjct: 1225 PSQNYQRN--SNQNSNQNPNQNPNQNPNQNP--NQNPNQ 1259
>sptr|Q8I5B3|Q8I5B3 Hypothetical protein.
Length = 822
Score = 34.7 bits (78), Expect = 3.6
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Frame = +2
Query: 146 PLPPPSTKRLLPASGLATARVSRASMDVLPLRCPSRSHNLKLSRS---------PICSHC 298
PLP ST ++PA+G ++ +AS L + N+ +SRS P SH
Sbjct: 618 PLPSTSTTPIIPAAG--SSNFPKASTSSLQQQVHGPFPNVNMSRSSFAINSQMPPSFSHP 675
Query: 299 PSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNP 409
+ N N N +I + + N P +LN NP
Sbjct: 676 NNNNNNNNNNNINNNNNNSGMMPPRPSQYSNNLNLNP 712
>sptr|Q8IES7|Q8IES7 Hypothetical protein.
Length = 9271
Score = 34.3 bits (77), Expect = 4.8
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 302 SQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
+QN+N+N+ H +Q++N N + +N N ++NQN NQ+
Sbjct: 4635 NQNINQNINHNINQNINHNINQNINQNINQNINQNINQN 4673
>sptr|Q93325|Q93325 C33G3.1 protein.
Length = 793
Score = 33.5 bits (75), Expect = 8.1
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 236 LRCPSRSHNLKLSRSPIC-------SHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPS 394
L P+ SH + ++P + P Q ++L +IQ Q N S + PS
Sbjct: 170 LEIPNTSHPILQPKAPELVPQLQPQTALPYQQKPQSLLNIQQQQFNTLPSQMPSTQTLPS 229
Query: 395 LNQNPNQSH 421
L++NP QSH
Sbjct: 230 LSENPGQSH 238
>sptr|Q8STF6|Q8STF6 C33G3.1b protein.
Length = 887
Score = 33.5 bits (75), Expect = 8.1
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 236 LRCPSRSHNLKLSRSPIC-------SHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPS 394
L P+ SH + ++P + P Q ++L +IQ Q N S + PS
Sbjct: 264 LEIPNTSHPILQPKAPELVPQLQPQTALPYQQKPQSLLNIQQQQFNTLPSQMPSTQTLPS 323
Query: 395 LNQNPNQSH 421
L++NP QSH
Sbjct: 324 LSENPGQSH 332
>sptr|Q9VJP3|Q9VJP3 CG18482 protein (Hypothetical protein).
Length = 1073
Score = 33.5 bits (75), Expect = 8.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 191 LATARVSRASMDVLPLRCPSRSHNLKLSRSPICSHCPS--QNLNRNLCHIQSQSLNLNQS 364
+ A + A++ +C R+ NL+L P C + + + + S SL L S
Sbjct: 337 IKNASIFMATLMAKTTQCTPRTVNLRLRLEPACVNWINAFDSAQKTPAPKASSSLTLRLS 396
Query: 365 PTLNLNQCPSL 397
P LNLN PSL
Sbjct: 397 PNLNLNSNPSL 407
>sptr|O96256|O96256 Hypothetical protein.
Length = 1710
Score = 33.5 bits (75), Expect = 8.1
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 254 SHNLKLSRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLN 376
S N + SP CS SQN+++NL SQ+L+ N S L+
Sbjct: 1576 SQNESYADSPSCSQYMSQNMSQNLSQNMSQNLSQNMSQNLS 1616
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 399,725,265
Number of Sequences: 1272877
Number of extensions: 6420570
Number of successful extensions: 24475
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24190
length of database: 406,886,216
effective HSP length: 127
effective length of database: 245,230,837
effective search space used: 88773562994
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)