BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2550113.2.1
(803 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sw|P41098|RL34_TOBAC 60S ribosomal protein L34. 187 1e-46
sw|P40590|RL34_PEA 60S ribosomal protein L34. 185 5e-46
sptrnew|AAM51402|AAM51402 Putative 60S ribosomal protein L34. 184 2e-45
sptrnew|AAL85030|AAL85030 Putative 60s ribosomal protein L34. 184 2e-45
sw|Q42351|RL34_ARATH 60S ribosomal protein L34. 184 2e-45
sptr|Q8L9D3|Q8L9D3 60s ribosomal protein L34. 182 3e-45
sptr|Q9FE65|Q9FE65 Putative 60S ribosomal protein L34 (60S ribos... 182 6e-45
sptr|Q9LJW6|Q9LJW6 60S ribosomal protein L34 (Putative 60S ribos... 177 1e-43
sptr|Q84XZ0|Q84XZ0 60S ribosomal protein L34 (Fragment). 150 2e-35
sptrnew|EAA05780|EAA05780 AgCP10269 (Fragment). 113 3e-24
sptr|Q8WQI6|Q8WQI6 Ribosomal protein L34. 113 3e-24
sw|O42846|RL34_SCHPO 60S ribosomal protein L34. 113 3e-24
sptr|Q9VHE5|Q9VHE5 CG9354 protein (RH48056p). 111 1e-23
sptr|Q8SYG0|Q8SYG0 RE63456p. 110 2e-23
sptr|Q9VBH8|Q9VBH8 CG6090 protein. 110 2e-23
sptr|Q9URT8|Q9URT8 60s ribosomal protein L34. 110 2e-23
sptr|Q95X53|Q95X53 Hypothetical 12.7 kDa protein. 107 1e-22
sptrnew|EAA33882|EAA33882 Hypothetical protein ( (AF378548) ribo... 106 3e-22
sw|Q9NB34|RL34_AEDTR 60S ribosomal protein L34. 105 9e-22
sw|P45842|RL34_AEDAL 60S ribosomal protein L34 (L31). 105 9e-22
sptr|Q86QS2|Q86QS2 Ribosomal protein L34. 100 2e-20
sw|P87262|R34A_YEAST 60S ribosomal protein L34-A. 100 2e-20
sw|P40525|R34B_YEAST 60S ribosomal protein L34-B. 100 3e-20
sptr|Q96W42|Q96W42 Ribosomal protein L34-like protein. 100 4e-20
sptr|Q8IBY4|Q8IBY4 60S ribosomal protein L34-a, putative. 97 2e-19
sptr|Q7ZWJ7|Q7ZWJ7 Similar to ribosomal protein L34. 94 2e-18
sptrnew|AAH53736|AAH53736 Hypothetical protein. 94 2e-18
sptrnew|EAA16795|EAA16795 Ribosomal protein L34e, putative. 93 4e-18
sw|P49207|RL34_HUMAN 60S ribosomal protein L34. 92 1e-17
sw|Q9D1R9|RL34_MOUSE 60S ribosomal protein L34. 91 1e-17
>sw|P41098|RL34_TOBAC 60S ribosomal protein L34.
Length = 120
Score = 187 bits (475), Expect = 1e-46
Identities = 92/99 (92%), Positives = 95/99 (95%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRLTYRKRHSYATKSNQ RVVKTPGGKL+YQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
EYKRSRLSRNRRTVNR YGGVLSG+AVRERIIRAFLVEE
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEE 99
>sw|P40590|RL34_PEA 60S ribosomal protein L34.
Length = 120
Score = 185 bits (470), Expect = 5e-46
Identities = 92/99 (92%), Positives = 94/99 (94%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRLTYR+RHSYATKSNQ RVVKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
EYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAFLVEE
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEE 99
>sptrnew|AAM51402|AAM51402 Putative 60S ribosomal protein L34.
Length = 120
Score = 184 bits (466), Expect = 2e-45
Identities = 90/99 (90%), Positives = 94/99 (94%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
EYKRSRLSRNRRTVNR YGGVLSG+AVRERIIRAFLVEE
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEE 99
>sptrnew|AAL85030|AAL85030 Putative 60s ribosomal protein L34.
Length = 120
Score = 184 bits (466), Expect = 2e-45
Identities = 90/99 (90%), Positives = 94/99 (94%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
EYKRSRLSRNRRTVNR YGGVLSG+AVRERIIRAFLVEE
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEE 99
>sw|Q42351|RL34_ARATH 60S ribosomal protein L34.
Length = 120
Score = 184 bits (466), Expect = 2e-45
Identities = 90/99 (90%), Positives = 94/99 (94%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
EYKRSRLSRNRRTVNR YGGVLSG+AVRERIIRAFLVEE
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEE 99
>sptr|Q8L9D3|Q8L9D3 60s ribosomal protein L34.
Length = 120
Score = 182 bits (463), Expect = 3e-45
Identities = 89/99 (89%), Positives = 94/99 (94%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKK+ASGPKCPVTGK+IQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKKASGPKCPVTGKRIQGIPHLRPS 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
EYKRSRLSRNRRTVNR YGGVLSG+AVRERIIRAFLVEE
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEE 99
>sptr|Q9FE65|Q9FE65 Putative 60S ribosomal protein L34 (60S
ribosomal protein L34, putative) (T6C23.18)
(F24J1.23/F24J1.23).
Length = 119
Score = 182 bits (461), Expect = 6e-45
Identities = 89/99 (89%), Positives = 92/99 (92%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRL YR RHSYATKSNQ R+VKTPGGKL YQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
EYKRSRLSRNRRTVNR YGGVLSG+AVRERIIRAFLVEE
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEE 99
>sptr|Q9LJW6|Q9LJW6 60S ribosomal protein L34 (Putative 60S
ribosomal protein L34).
Length = 120
Score = 177 bits (450), Expect = 1e-43
Identities = 86/99 (86%), Positives = 90/99 (90%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRL YR RHSYATKSNQ R+VKTPGGKL YQ T KRASGPKCPVTGK+IQGIPHLRPA
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
EYKRSRL+RN RTVNR YGGVLSG AVRERI+RAFLVEE
Sbjct: 61 EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEE 99
>sptr|Q84XZ0|Q84XZ0 60S ribosomal protein L34 (Fragment).
Length = 102
Score = 150 bits (379), Expect = 2e-35
Identities = 74/81 (91%), Positives = 76/81 (93%)
Frame = -2
Query: 640 QTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAEYKRSRLSRNRRTVNRPY 461
Q RVVKTPGGKLVY+ TKKRASGPKCPVTGK+IQGIPHLRPAEYKRSRL RNRRTV RPY
Sbjct: 1 QRRVVKTPGGKLVYRSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVTRPY 60
Query: 460 GGVLSGTAVRERIIRAFLVEE 398
GGVLSG AVRERIIRAFLVEE
Sbjct: 61 GGVLSGIAVRERIIRAFLVEE 81
>sptrnew|EAA05780|EAA05780 AgCP10269 (Fragment).
Length = 137
Score = 113 bits (283), Expect = 3e-24
Identities = 59/100 (59%), Positives = 73/100 (73%)
Frame = -2
Query: 697 KMVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 518
KMVQRLT R+R SY TKSN+ R+V+TPGG+LVYQY KKR + PKC K++ GI RP
Sbjct: 3 KMVQRLTLRRRLSYNTKSNKRRIVRTPGGRLVYQYVKKRRTLPKCGQCKKELNGIKPSRP 62
Query: 517 AEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
E R R+SR +TV R +GGVL +RERIIRAFL++E
Sbjct: 63 CE--RPRMSRRLKTVTRTFGGVLCHHCLRERIIRAFLIDE 100
>sptr|Q8WQI6|Q8WQI6 Ribosomal protein L34.
Length = 119
Score = 113 bits (282), Expect = 3e-24
Identities = 58/99 (58%), Positives = 72/99 (72%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRLT+R+R SY TKSNQ R+V+TPGG+LVYQY KK P+C K++GI RPA
Sbjct: 1 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
E RSRL ++TV R YGGVL V++RI+RAFL+EE
Sbjct: 61 E--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEE 97
>sw|O42846|RL34_SCHPO 60S ribosomal protein L34.
Length = 112
Score = 113 bits (282), Expect = 3e-24
Identities = 54/99 (54%), Positives = 74/99 (74%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
M QR+TYR+R +Y T+SN+TR++KTPG + Y + KK + P+C TG +QGIP LRP
Sbjct: 1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPR 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
E+ +RLS N++TV R YGG LS AV++RI+RAFL+EE
Sbjct: 61 EF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAFLIEE 97
>sptr|Q9VHE5|Q9VHE5 CG9354 protein (RH48056p).
Length = 168
Score = 111 bits (277), Expect = 1e-23
Identities = 55/99 (55%), Positives = 75/99 (75%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRLT R+R SY T+SN+ R+V+TPGG+LVYQY KK + P+C +K++GI RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
E R R+S+ +TV+R YGGVL + +RERI+RAFL+EE
Sbjct: 61 E--RPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEE 97
>sptr|Q8SYG0|Q8SYG0 RE63456p.
Length = 162
Score = 110 bits (276), Expect = 2e-23
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRLT R+R SY T+SN+ R+V+TPGG+LVYQY KK + P+C +K+ GI RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPS 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
E R R+S+ +TV+R YGGVL + +RERI+RAFL+EE
Sbjct: 61 E--RPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEE 97
>sptr|Q9VBH8|Q9VBH8 CG6090 protein.
Length = 162
Score = 110 bits (276), Expect = 2e-23
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRLT R+R SY T+SN+ R+V+TPGG+LVYQY KK + P+C +K+ GI RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
E R R+S+ +TV+R YGGVL + +RERI+RAFL+EE
Sbjct: 61 E--RPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEE 97
>sptr|Q9URT8|Q9URT8 60s ribosomal protein L34.
Length = 111
Score = 110 bits (275), Expect = 2e-23
Identities = 53/99 (53%), Positives = 73/99 (73%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
M QR+TYR+R +Y T+SN+TR++KTPG + Y + KK + P+C TG +QGIP LRP
Sbjct: 1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPR 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
E+ +RLS N++ V R YGG LS AV++RI+RAFL+EE
Sbjct: 61 EF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAFLIEE 97
>sptr|Q95X53|Q95X53 Hypothetical 12.7 kDa protein.
Length = 110
Score = 107 bits (268), Expect = 1e-22
Identities = 59/99 (59%), Positives = 67/99 (67%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
M R+TYR+R SY T SN+ R+VKTPGG+LV QY KKR PKC TG K+ GI RP
Sbjct: 1 MSLRVTYRRRLSYNTTSNKKRLVKTPGGRLVVQYIKKRGQIPKCRDTGVKLHGITPARPI 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
+ L RN RTV R YGG LS AV+ERI RAFLVEE
Sbjct: 61 ALR--LLKRNERTVTRAYGGCLSPNAVKERITRAFLVEE 97
>sptrnew|EAA33882|EAA33882 Hypothetical protein ( (AF378548)
ribosomal protein L34-like protein.
Length = 117
Score = 106 bits (265), Expect = 3e-22
Identities = 51/96 (53%), Positives = 70/96 (72%)
Frame = -2
Query: 685 RLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAEYK 506
R+TYR+R+ Y T SN+TR+VKTPGG+L + KKR + PKC G K+ G+P LRP EY
Sbjct: 5 RVTYRRRNPYNTTSNKTRIVKTPGGQLRVLHIKKRGTAPKCGDCGIKLPGVPALRPREY- 63
Query: 505 RSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
++LS+ ++TV R YGG G VR+R++RAFL+EE
Sbjct: 64 -AQLSKPKKTVQRAYGGSRCGNCVRDRVVRAFLIEE 98
>sw|Q9NB34|RL34_AEDTR 60S ribosomal protein L34.
Length = 138
Score = 105 bits (261), Expect = 9e-22
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = -2
Query: 691 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAE 512
VQRLT R+R SY TKSN+ RVV+TPGG+LVY Y KK+ + PKC +K+ GI RP+E
Sbjct: 1 VQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE 60
Query: 511 YKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
R R+ R +TV R +GGVL +RERIIRAFL++E
Sbjct: 61 --RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAFLIDE 96
>sw|P45842|RL34_AEDAL 60S ribosomal protein L34 (L31).
Length = 129
Score = 105 bits (261), Expect = 9e-22
Identities = 55/98 (56%), Positives = 70/98 (71%)
Frame = -2
Query: 691 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAE 512
VQRLT R+R SY TKSN+ RVV+TPGG+LVY Y KK+ + PKC +K+ GI RP+E
Sbjct: 1 VQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE 60
Query: 511 YKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
R R+ R +TV R +GGVL +RERIIRAFL++E
Sbjct: 61 --RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAFLIDE 96
>sptr|Q86QS2|Q86QS2 Ribosomal protein L34.
Length = 118
Score = 100 bits (249), Expect = 2e-20
Identities = 55/99 (55%), Positives = 65/99 (65%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
MVQRLTYR+R SY TKSN+ R+ KTPGGKLVY YTKK+ S P C K+ G+ RP
Sbjct: 1 MVQRLTYRRRLSYNTKSNRRRISKTPGGKLVYLYTKKKGSVPVCGDCKVKLFGVKAPRPK 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
K +SR + V R YGG VRERI+RAFL+EE
Sbjct: 61 --KLMSMSRRLKHVTRAYGGSRCSKCVRERIVRAFLIEE 97
>sw|P87262|R34A_YEAST 60S ribosomal protein L34-A.
Length = 121
Score = 100 bits (249), Expect = 2e-20
Identities = 51/99 (51%), Positives = 69/99 (69%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q+ KK A+ PKC G +QGI LRP
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPR 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
+Y + +S+ +TV+R YGG V+ERIIRAFL+EE
Sbjct: 61 QY--ATVSKTHKTVSRAYGGSRCANCVKERIIRAFLIEE 97
>sw|P40525|R34B_YEAST 60S ribosomal protein L34-B.
Length = 121
Score = 100 bits (248), Expect = 3e-20
Identities = 50/99 (50%), Positives = 69/99 (69%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q+ KK A+ PKC G +QGI LRP
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPR 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
+Y + +S+ +TV+R YGG V+ERI+RAFL+EE
Sbjct: 61 QY--ATVSKTHKTVSRAYGGSRCANCVKERIVRAFLIEE 97
>sptr|Q96W42|Q96W42 Ribosomal protein L34-like protein.
Length = 113
Score = 99.8 bits (247), Expect = 4e-20
Identities = 46/96 (47%), Positives = 68/96 (70%)
Frame = -2
Query: 685 RLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAEYK 506
R+ YR+R+ Y T SN+TRV+KTPGG++ + KKR + PKC G K+ G+P LRP EY
Sbjct: 5 RVVYRRRNGYNTTSNRTRVIKTPGGEIRVLHIKKRGTAPKCGDCGIKLPGVPALRPREY- 63
Query: 505 RSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
+++S+ ++TV R YGG V++R++RAFL+EE
Sbjct: 64 -AQISKPKKTVQRAYGGSRCANCVQDRVVRAFLIEE 98
>sptr|Q8IBY4|Q8IBY4 60S ribosomal protein L34-a, putative.
Length = 150
Score = 97.1 bits (240), Expect = 2e-19
Identities = 51/99 (51%), Positives = 63/99 (63%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
M QR+ YR+ + Y TKSN+ R V+TPGGKL KK+A PKC IQG+ LRPA
Sbjct: 1 MAQRVHYRRHNHYNTKSNKVRPVRTPGGKLTIHVVKKKAGKPKCADCKTAIQGVKALRPA 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
+ R+R R RTV R YGG + +RERI+RAFL EE
Sbjct: 61 DNYRAR--RKNRTVARAYGGSICARCIRERIMRAFLFEE 97
>sptr|Q7ZWJ7|Q7ZWJ7 Similar to ribosomal protein L34.
Length = 117
Score = 94.4 bits (233), Expect = 2e-18
Identities = 50/101 (49%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 521
MVQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK PK C + +++GI +R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKTGKSPKSACGICPGRLRGIRAVR 60
Query: 520 PAEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
P RLS+ ++ V+R YGG + VR+RI RAFL+EE
Sbjct: 61 PQVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEE 99
>sptrnew|AAH53736|AAH53736 Hypothetical protein.
Length = 407
Score = 94.0 bits (232), Expect = 2e-18
Identities = 50/102 (49%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Frame = -2
Query: 697 KMVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHL 524
+MVQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK PK C V +++G+ +
Sbjct: 290 RMVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAV 349
Query: 523 RPAEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
RP RLS+ ++ V+R YGG + VR+RI RAFL+EE
Sbjct: 350 RPKVL--MRLSKTQKHVSRAYGGSMCAKCVRDRIKRAFLIEE 389
>sptrnew|EAA16795|EAA16795 Ribosomal protein L34e, putative.
Length = 164
Score = 93.2 bits (230), Expect = 4e-18
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = -2
Query: 694 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 515
M QR+ YRK + Y TKSN+ R ++TPGGKL KK+A PKC IQG+ LRPA
Sbjct: 1 MAQRVHYRKHNHYNTKSNKVRPIRTPGGKLTIHVIKKKAGKPKCADCKNPIQGVKALRPA 60
Query: 514 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
+ +R+R + R V+R YGG + +ERI+RAFL EE
Sbjct: 61 DNQRAR--KKDRKVSRAYGGSICAKCXKERIMRAFLFEE 97
>sw|P49207|RL34_HUMAN 60S ribosomal protein L34.
Length = 116
Score = 91.7 bits (226), Expect = 1e-17
Identities = 49/100 (49%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = -2
Query: 691 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLRP 518
VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK PK C V +++G+ +RP
Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRP 60
Query: 517 AEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
RLS+ ++ V+R YGG + VR+RI RAFL+EE
Sbjct: 61 KVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEE 98
>sw|Q9D1R9|RL34_MOUSE 60S ribosomal protein L34.
Length = 116
Score = 91.3 bits (225), Expect = 1e-17
Identities = 49/100 (49%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = -2
Query: 691 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLRP 518
VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK PK C V +++G+ +RP
Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRP 60
Query: 517 AEYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEE 398
RLS+ ++ V+R YGG + VR+RI RAFL+EE
Sbjct: 61 KVL--MRLSKTQKHVSRAYGGSMCAKCVRDRIKRAFLIEE 98
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 589,589,102
Number of Sequences: 1272877
Number of extensions: 12402263
Number of successful extensions: 52551
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52484
length of database: 406,886,216
effective HSP length: 121
effective length of database: 252,868,099
effective search space used: 36918742454
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)