BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542097.2.1
(887 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q94E96|Q94E96 Putative histone H2A. 163 3e-39
sptr|Q9M531|Q9M531 Histone H2A. 160 3e-38
sptr|Q9ST30|Q9ST30 Histone H2A-like protein (Fragment). 157 1e-37
sw|P40280|H2A_MAIZE Histone H2A. 157 2e-37
sptr|Q9LZ46|Q9LZ46 Hypothetical protein (Histone H2A). 157 2e-37
sw|P19177|H2A_PETCR Histone H2A. 157 2e-37
sw|P25469|H2A_LYCES Histone H2A. 153 3e-36
sw|P25470|H2A1_PEA Histone H2A. 153 3e-36
sw|P02277|H2A3_WHEAT Histone H2A.2.2. 152 6e-36
sw|P40281|H2A2_PEA Histone H2A. 150 2e-35
sw|P02276|H2A2_WHEAT Histone H2A.2.1. 150 3e-35
sptr|Q9SB25|Q9SB25 Protein H2A. 149 4e-35
sptr|Q43213|Q43213 Protein H2A. 149 4e-35
sw|P02275|H2A1_WHEAT Histone H2A.1. 149 4e-35
sptr|Q8H0G7|Q8H0G7 H2A histone. 149 7e-35
sptr|Q43214|Q43214 Protein H2A. 147 2e-34
sptr|Q43310|Q43310 Histone H2A. 147 2e-34
sptr|Q9FJE8|Q9FJE8 Histone H2A-like protein (At5g59870). 145 7e-34
sptr|Q9STD8|Q9STD8 Histone H2A. 141 1e-32
sptr|Q94F49|Q94F49 AT5g27670/F15A18_130. 141 1e-32
sw|P35064|H2A1_TETTH Histone H2A.1. 140 2e-32
sw|P35065|H2A2_TETTH Histone H2A.2. 140 2e-32
sw|P02274|H2A2_TETPY Histone H2A.2. 140 2e-32
sw|P02273|H2A1_TETPY Histone H2A.1. 140 2e-32
sw|P16865|H2A3_VOLCA Histone H2A-III. 139 5e-32
sptr|Q42680|Q42680 Histone H2A. 139 7e-32
sw|P50567|H2A_CHLRE Histone H2A. 139 7e-32
sw|P16866|H2A4_VOLCA Histone H2A-IV. 138 9e-32
sptrnew|CAC84681|CAC84681 Putative histone H2B. 135 1e-30
sw|P35063|H2A_PICAB Histone H2A. 135 1e-30
>sptr|Q94E96|Q94E96 Putative histone H2A.
Length = 159
Score = 163 bits (412), Expect = 3e-39
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNK
Sbjct: 29 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 88
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 89 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 131
>sptr|Q9M531|Q9M531 Histone H2A.
Length = 153
Score = 160 bits (404), Expect = 3e-38
Identities = 80/103 (77%), Positives = 85/103 (82%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGR+LK+GRY+QRVG+GAP GNAARDNK
Sbjct: 24 VSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 83
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 84 KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLP 126
>sptr|Q9ST30|Q9ST30 Histone H2A-like protein (Fragment).
Length = 131
Score = 157 bits (398), Expect = 1e-37
Identities = 78/103 (75%), Positives = 85/103 (82%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSVKAGLQFPVGRIGRYLK+G+Y+QRVG+GAP GNAARDNK
Sbjct: 7 VTRSVKAGLQFPVGRIGRYLKKGQYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 66
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRH+LLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 67 KNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLP 109
>sw|P40280|H2A_MAIZE Histone H2A.
Length = 159
Score = 157 bits (397), Expect = 2e-37
Identities = 80/103 (77%), Positives = 82/103 (79%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+Q VGTGAP GNAARDNK
Sbjct: 29 VSRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 88
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RIIPRHVLLAIRNDEELGKLL GVTIAHGGVLPNINPVLLP
Sbjct: 89 KTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLP 131
>sptr|Q9LZ46|Q9LZ46 Hypothetical protein (Histone H2A).
Length = 153
Score = 157 bits (396), Expect = 2e-37
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVK+GLQFPVGRIGRYLK+GRYS+RVGTGAP GNAARDNK
Sbjct: 25 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 84
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPNINP+LLP
Sbjct: 85 KNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 127
>sw|P19177|H2A_PETCR Histone H2A.
Length = 149
Score = 157 bits (396), Expect = 2e-37
Identities = 78/103 (75%), Positives = 83/103 (80%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSVKAGLQFPVGRIGRYLK+GRY+QRVGTGAP GNAARDNK
Sbjct: 23 VTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 82
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RIIPRH+LLA+RNDEELGKLLAGVT AHGGVLPNINPVLLP
Sbjct: 83 KTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLP 125
>sw|P25469|H2A_LYCES Histone H2A.
Length = 146
Score = 153 bits (387), Expect = 3e-36
Identities = 76/103 (73%), Positives = 84/103 (81%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++S+KAGLQFPVGRIGRYLK+GRY+QRVG+GAP GNAARDNK
Sbjct: 22 VTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNK 81
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRHVLLA+RNDEELGKLLAGVTIA GGVLPNINPVLLP
Sbjct: 82 KSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLP 124
>sw|P25470|H2A1_PEA Histone H2A.
Length = 150
Score = 153 bits (386), Expect = 3e-36
Identities = 75/103 (72%), Positives = 84/103 (81%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSV+AGLQFPVGR+GR+LK+GRY+QRVGTGAP GNAARDNK
Sbjct: 24 VTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+LLA+RNDEELGKLLAGVTIA+GGVLPNINPVLLP
Sbjct: 84 KNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNINPVLLP 126
>sw|P02277|H2A3_WHEAT Histone H2A.2.2.
Length = 151
Score = 152 bits (384), Expect = 6e-36
Identities = 72/103 (69%), Positives = 85/103 (82%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RS+KAGLQFPVGRIGRYLK+GRY+QRVG+GAP GNAA+DNK
Sbjct: 22 VTRSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNK 81
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RI+PRH+LLA+RND+ELG+LLAGVTIAHGGV+PNINPVLLP
Sbjct: 82 KSRIVPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINPVLLP 124
>sw|P40281|H2A2_PEA Histone H2A.
Length = 149
Score = 150 bits (380), Expect = 2e-35
Identities = 75/103 (72%), Positives = 83/103 (80%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSV+AGLQFPVGRIGR+LK+GRY+QRVGTGAP GNAARDNK
Sbjct: 24 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+LLA+RND ELGKLLAGVTIA+GGVLPNINPVLLP
Sbjct: 84 KNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLP 126
>sw|P02276|H2A2_WHEAT Histone H2A.2.1.
Length = 151
Score = 150 bits (378), Expect = 3e-35
Identities = 71/103 (68%), Positives = 84/103 (81%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++S+KAGLQFPVGRIGRYLK+GRY+QRVG+GAP GNAA+DNK
Sbjct: 22 VTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNK 81
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+LLAIRND+ELG+LL+GVTIAHGGV+PNINPVLLP
Sbjct: 82 KTRIVPRHLLLAIRNDQELGRLLSGVTIAHGGVIPNINPVLLP 124
>sptr|Q9SB25|Q9SB25 Protein H2A.
Length = 146
Score = 149 bits (377), Expect = 4e-35
Identities = 73/103 (70%), Positives = 83/103 (80%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSVKAGLQFPVGRIGRYLK+GRY+QRVG+GAP GNAA+DNK
Sbjct: 13 VTRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNK 72
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RIIPRH+LLA+RND+ELG+LLAGVTIAHGGV+PNIN VLLP
Sbjct: 73 KTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLP 115
>sptr|Q43213|Q43213 Protein H2A.
Length = 145
Score = 149 bits (377), Expect = 4e-35
Identities = 73/103 (70%), Positives = 83/103 (80%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSVKAGLQFPVGRIGRYLK+GRY+QRVG+GAP GNAA+DNK
Sbjct: 13 VTRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNK 72
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RIIPRH+LLA+RND+ELG+LLAGVTIAHGGV+PNIN VLLP
Sbjct: 73 KTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLP 115
>sw|P02275|H2A1_WHEAT Histone H2A.1.
Length = 145
Score = 149 bits (377), Expect = 4e-35
Identities = 73/103 (70%), Positives = 83/103 (80%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSVKAGLQFPVGRIGRYLK+GRY+QRVG+GAP GNAA+DNK
Sbjct: 12 VTRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNK 71
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RIIPRH+LLA+RND+ELG+LLAGVTIAHGGV+PNIN VLLP
Sbjct: 72 KTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLP 114
>sptr|Q8H0G7|Q8H0G7 H2A histone.
Length = 148
Score = 149 bits (375), Expect = 7e-35
Identities = 74/103 (71%), Positives = 83/103 (80%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V++SVKAGLQFPVGRI R+LK+GRY+QRVG+GAP GNAARDNK
Sbjct: 24 VTKSVKAGLQFPVGRIARFLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNK 83
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRHVLLA+RNDEELGKLL+GVTIA GGVLPNINPVLLP
Sbjct: 84 KSRIIPRHVLLAVRNDEELGKLLSGVTIASGGVLPNINPVLLP 126
>sptr|Q43214|Q43214 Protein H2A.
Length = 148
Score = 147 bits (371), Expect = 2e-34
Identities = 72/103 (69%), Positives = 82/103 (79%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSVKAGLQFPVGRIGRYLK+GRY+Q VG+GAP GNAA+DNK
Sbjct: 13 VTRSVKAGLQFPVGRIGRYLKKGRYAQAVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNK 72
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RIIPRH+LLA+RND+ELG+LLAGVTIAHGGV+PNIN VLLP
Sbjct: 73 KTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLP 115
>sptr|Q43310|Q43310 Histone H2A.
Length = 146
Score = 147 bits (370), Expect = 2e-34
Identities = 71/103 (68%), Positives = 82/103 (79%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V+RSVKAGLQFPVGRIGRYLK+GRY+QR+G+GAP GNAA+DNK
Sbjct: 13 VTRSVKAGLQFPVGRIGRYLKKGRYAQRIGSGAPVYLAAVLEYLAAEVLELAGNAAKDNK 72
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RIIPRH+LLA+RND+ELG+LLAGVTIAHGGV+P IN VLLP
Sbjct: 73 KTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPTINSVLLP 115
>sptr|Q9FJE8|Q9FJE8 Histone H2A-like protein (At5g59870).
Length = 150
Score = 145 bits (366), Expect = 7e-34
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+S+KAGLQFPVGRI R+LK+GRY+QR+G GAP GNAARDNK
Sbjct: 25 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNK 84
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPNIN VLLP
Sbjct: 85 KSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 127
>sptr|Q9STD8|Q9STD8 Histone H2A.
Length = 152
Score = 141 bits (356), Expect = 1e-32
Identities = 73/103 (70%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G GAP GNAARDNK
Sbjct: 27 VSKSVKAGLQFPVGRISRYLKKGRYAIRYGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 86
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELGKLL GVTIA GGVLPNINPVLLP
Sbjct: 87 KNRINPRHLCLAIRNDEELGKLLHGVTIASGGVLPNINPVLLP 129
>sptr|Q94F49|Q94F49 AT5g27670/F15A18_130.
Length = 150
Score = 141 bits (355), Expect = 1e-32
Identities = 72/103 (69%), Positives = 78/103 (75%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS+SVKAGLQFPVGRI RYLK+GRY+ R G+GAP GNAARDNK
Sbjct: 26 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 85
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLLP
Sbjct: 86 KNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 128
>sw|P35064|H2A1_TETTH Histone H2A.1.
Length = 137
Score = 140 bits (354), Expect = 2e-32
Identities = 69/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS +AGLQFPVGRI R+LK GRYS+RVGTGAP GNAA+DNK
Sbjct: 19 VSRSARAGLQFPVGRISRFLKHGRYSERVGTGAPVYLAAVLEYLAAEVLELAGNAAKDNK 78
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+LLAIRNDEEL KL+A TIA GGVLPNINP+LLP
Sbjct: 79 KTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLP 121
>sw|P35065|H2A2_TETTH Histone H2A.2.
Length = 132
Score = 140 bits (353), Expect = 2e-32
Identities = 68/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS +AGLQFPVGRI R+LK GRYS+R+GTGAP GNAA+DNK
Sbjct: 19 VSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNK 78
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+LLAIRNDEEL KL+A TIA GGVLPNINP+LLP
Sbjct: 79 KTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLP 121
>sw|P02274|H2A2_TETPY Histone H2A.2.
Length = 132
Score = 140 bits (353), Expect = 2e-32
Identities = 68/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS +AGLQFPVGRI R+LK GRYS+R+GTGAP GNAA+DNK
Sbjct: 19 VSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNK 78
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+LLAIRNDEEL KL+A TIA GGVLPNINP+LLP
Sbjct: 79 KTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLP 121
>sw|P02273|H2A1_TETPY Histone H2A.1.
Length = 137
Score = 140 bits (353), Expect = 2e-32
Identities = 68/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS +AGLQFPVGRI R+LK GRYS+R+GTGAP GNAA+DNK
Sbjct: 19 VSRSARAGLQFPVGRISRFLKHGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNK 78
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+LLAIRNDEEL KL+A TIA GGVLPNINP+LLP
Sbjct: 79 KTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLP 121
>sw|P16865|H2A3_VOLCA Histone H2A-III.
Length = 129
Score = 139 bits (350), Expect = 5e-32
Identities = 69/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI RYLK+G+Y++R+G GAP GNAARDNK
Sbjct: 15 VSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNK 74
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LAIRNDEELGKLL VTIA GGVLPNI+ VLLP
Sbjct: 75 KNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLP 117
>sptr|Q42680|Q42680 Histone H2A.
Length = 130
Score = 139 bits (349), Expect = 7e-32
Identities = 69/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI RYLK+G+Y++R+G GAP GNAARDNK
Sbjct: 15 VSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNK 74
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LAIRNDEELGKLL VTIA GGVLPNI+ VLLP
Sbjct: 75 KNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLP 117
>sw|P50567|H2A_CHLRE Histone H2A.
Length = 129
Score = 139 bits (349), Expect = 7e-32
Identities = 69/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI RYLK+G+Y++R+G GAP GNAARDNK
Sbjct: 15 VSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNK 74
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LAIRNDEELGKLL VTIA GGVLPNI+ VLLP
Sbjct: 75 KNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLP 117
>sw|P16866|H2A4_VOLCA Histone H2A-IV.
Length = 129
Score = 138 bits (348), Expect = 9e-32
Identities = 69/103 (66%), Positives = 77/103 (74%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI RYLK+G+Y++R+G GAP GNAARDNK
Sbjct: 15 VSRSSKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNK 74
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LAIRNDEELGKLL VTIA GGVLPNI+ VLLP
Sbjct: 75 KNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLP 117
>sptrnew|CAC84681|CAC84681 Putative histone H2B.
Length = 138
Score = 135 bits (339), Expect = 1e-30
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 19 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 78
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 79 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 121
>sw|P35063|H2A_PICAB Histone H2A.
Length = 138
Score = 135 bits (339), Expect = 1e-30
Identities = 67/103 (65%), Positives = 76/103 (73%)
Frame = +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 19 VSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 78
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ VLLP
Sbjct: 79 KNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 121
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 433,215,242
Number of Sequences: 1272877
Number of extensions: 6913004
Number of successful extensions: 19955
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19826
length of database: 406,886,216
effective HSP length: 122
effective length of database: 251,595,222
effective search space used: 43525973406
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)