BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 2521459.2.2 (850 letters) Database: /db/trembl-ebi/tmp/swall 1,165,242 sequences; 374,381,506 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sptr|Q93Y60|Q93Y60 Putative chorismate mutase. 229 3e-59 sptr|Q9C544|Q9C544 Chorismate mutase, putative (Putative chorism... 166 3e-40 sptr|Q9XF60|Q9XF60 Chorismate mutase 3. 162 6e-39 sw|P42738|CHMU_ARATH Chorismate mutase, chloroplast precursor (E... 155 6e-37 sptr|Q9S7H4|Q9S7H4 Chorismate mutase (EC 5.4.99.5) (Putative cho... 141 1e-32 sptr|Q9STB2|Q9STB2 Chorimate mutase (EC 5.4.99.5). 124 1e-27 sw|P32178|CHMU_YEAST Chorismate mutase (EC 5.4.99.5) (CM). 91 2e-17 sptrnew|EAA32739|EAA32739 Hypothetical protein. 90 4e-17 sptr|O65861|O65861 Chorismate mutase (Fragment). 90 4e-17 sptr|Q9Y7B2|Q9Y7B2 Chorismate mutase (EC 5.4.99.5). 82 1e-14 sw|O13739|CHMU_SCHPO Probable chorismate mutase (EC 5.4.99.5) (CM). 81 2e-14 sptr|Q9P4D8|Q9P4D8 Chorismate mutase (EC 5.4.99.5). 79 9e-14 sptr|Q96VZ8|Q96VZ8 Chorismate mutase. 78 1e-13 sptr|O22410|O22410 Cytosolic chorismate mutase 2 (Fragment). 55 1e-06 sptr|O22409|O22409 Plastidic chorismate mutase 1 (Fragment). 48 1e-04 sptr|Q8R9N8|Q8R9N8 Thiamine biosynthesis enzyme ThiH and related... 33 3.4 sptr|Q9DWH3|Q9DWH3 Pr5. 32 7.7
>sptr|Q93Y60|Q93Y60 Putative chorismate mutase. Length = 294 Score = 229 bits (584), Expect = 3e-59 Identities = 117/160 (73%), Positives = 126/160 (78%) Frame = -1 Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632 Y HP A SINI WKMYFD LP SDGN GSSAL CLQ S+RI YG Sbjct: 135 YPKVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQALSKRIHYG 194 Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452 KF AKFQESPEAY PAIIAQD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+ Sbjct: 195 KFVAEAKFQESPEAYMPAIIAQDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAE 254 Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 D G+PP+YKIRPSLVAELYSYRIMPLTKEV+VAYLLRRLD Sbjct: 255 DNGAPPMYKIRPSLVAELYSYRIMPLTKEVQVAYLLRRLD 294 >sptr|Q9C544|Q9C544 Chorismate mutase, putative (Putative chorismate mutase, 16810-15349) (At1g69370). Length = 316 Score = 166 bits (421), Expect = 3e-40 Identities = 88/160 (55%), Positives = 103/160 (64%) Frame = -1 Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632 Y H A SINI W MYF LP DGN GS+AL CLQ S+RI +G Sbjct: 157 YPQVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHFG 216 Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452 KF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE KA+IFGQ++ I Sbjct: 217 KFVAEAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 276 Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 + + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD Sbjct: 277 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD 316 >sptr|Q9XF60|Q9XF60 Chorismate mutase 3. Length = 316 Score = 162 bits (409), Expect = 6e-39 Identities = 87/160 (54%), Positives = 101/160 (63%) Frame = -1 Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632 Y H A SINI W MYF LP DGN GS+AL CLQ S+RI Sbjct: 157 YPQVLHRCAESININKKVWNMYFKHLLPRLVKPGDDGNCGSAALCDTMCLQILSKRIHLR 216 Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452 KF AKF+E+P AY AI QDR QLM LLT TVE V+ RVE KA+IFGQ++ I Sbjct: 217 KFVADAKFRENPAAYETAIKEQDRTQLMQLLTYETVEEVVKKRVEIKARIFGQDITINDP 276 Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 + + P YKI+PSLVA+LY RIMPLTKEV++ YLLRRLD Sbjct: 277 ETEADPSYKIQPSLVAKLYGERIMPLTKEVQIEYLLRRLD 316 >sw|P42738|CHMU_ARATH Chorismate mutase, chloroplast precursor (EC 5.4.99.5) (CM-1). Length = 334 Score = 155 bits (392), Expect = 6e-37 Identities = 86/167 (51%), Positives = 102/167 (61%), Gaps = 7/167 (4%) Frame = -1 Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632 Y H A SINI W MYF +P DGN GS+A+ CLQ S+RI YG Sbjct: 168 YPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYG 227 Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452 KF AKFQ SPEAY AI AQD+D LM++LT TVE A++ RVE K + +GQEV +G + Sbjct: 228 KFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGME 287 Query: 451 DK-------GSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 +K VYKI P LV +LY IMPLTKEV+V YLLRRLD Sbjct: 288 EKEEEEEEGNESHVYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD 334 >sptr|Q9S7H4|Q9S7H4 Chorismate mutase (EC 5.4.99.5) (Putative chorismate mutase CM2). Length = 265 Score = 141 bits (355), Expect = 1e-32 Identities = 79/162 (48%), Positives = 96/162 (59%), Gaps = 2/162 (1%) Frame = -1 Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632 Y HP A S+NI W +YF LP DGN S+A CLQ SRRI YG Sbjct: 105 YPSALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYG 164 Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEV--NIG 458 KF KF+++P+ Y PAI AQDR+ LM LLT VE V+ RV+ KA+ FGQEV N G Sbjct: 165 KFVAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQKKAETFGQEVKFNSG 224 Query: 457 AKDKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 D+ S YK+ P L + +Y ++PLTK VEV YLLRRLD Sbjct: 225 YGDE-SKKKYKVDPLLASRIYGEWLIPLTKLVEVEYLLRRLD 265 >sptr|Q9STB2|Q9STB2 Chorimate mutase (EC 5.4.99.5). Length = 255 Score = 124 bits (312), Expect = 1e-27 Identities = 73/156 (46%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Frame = -1 Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSD-GNAGSSALXXXTCLQXXSRRIXYGKFXX 620 HP A S+N+ +Y + LP +D N ++A LQ SRRI YGKF Sbjct: 102 HPAAESVNVNEKILDIYINQMLPLFCTEVNDDANFATTAACDIQLLQALSRRIHYGKFVA 161 Query: 619 XAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGS 440 KF++S + Y P I+AQDRD LM LLT VE V+ RV KAK+FGQEV++ D Sbjct: 162 EVKFRDSIDEYKPFILAQDRDALMKLLTFEAVEEMVKKRVAKKAKVFGQEVSL--NDNAE 219 Query: 439 PPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 KI P LV+ LY +MPLTK VEV YLLRRLD Sbjct: 220 EVKGKIDPLLVSRLYDEWVMPLTKLVEVEYLLRRLD 255 >sw|P32178|CHMU_YEAST Chorismate mutase (EC 5.4.99.5) (CM). Length = 256 Score = 90.9 bits (224), Expect = 2e-17 Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 2/156 (1%) Frame = -1 Query: 793 PXAXSINIXXXXWKMYFDXXLPXXXXXXSD--GNAGSSALXXXTCLQXXSRRIXYGKFXX 620 P A +N K+Y + +P D N GS A CLQ SRRI +GKF Sbjct: 106 PYAPEVNYNDKIKKVYIEKIIPLISKRDGDDKNNFGSVATRDIECLQSLSRRIHFGKFVA 165 Query: 619 XAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGS 440 AKFQ YT I ++D + +M +T VE + R+ KA+++G + + ++ Sbjct: 166 EAKFQSDIPLYTKLIKSKDVEGIMKNITNSAVEEKILERLTKKAEVYGVDPTNESGER-- 223 Query: 439 PPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 +I P + ++Y ++P+TKEVEV YLLRRL+ Sbjct: 224 ----RITPEYLVKIYKEIVIPITKEVEVEYLLRRLE 255 >sptrnew|EAA32739|EAA32739 Hypothetical protein. Length = 269 Score = 89.7 bits (221), Expect = 4e-17 Identities = 51/123 (41%), Positives = 71/123 (57%) Frame = -1 Query: 700 NAGSSALXXXTCLQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVE 521 N GSSA CLQ SRRI +GKF +KFQ E +T I A DR+ + +T VE Sbjct: 144 NYGSSATCDIACLQAISRRIHFGKFVAESKFQSETEKFTKYIQAGDREAIGEAITNQAVE 203 Query: 520 RAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLR 341 + V R++ KA+ +G + +IGA + S KI V +Y ++PLTK VEV YL++ Sbjct: 204 KKVLERLKLKAETYGTDPSIGASEAESQ--RKINVEAVVAMYEEFVIPLTKVVEVEYLMQ 261 Query: 340 RLD 332 RL+ Sbjct: 262 RLE 264 >sptr|O65861|O65861 Chorismate mutase (Fragment). Length = 131 Score = 89.7 bits (221), Expect = 4e-17 Identities = 45/96 (46%), Positives = 57/96 (59%) Frame = -1 Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632 Y HP A SINI W+MYF LP DGN GS+A+ CLQ S+RI YG Sbjct: 31 YPQVLHPIANSININHKVWEMYFRDILPRLVKEGDDGNFGSTAVCDTMCLQALSKRIHYG 90 Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTV 524 KF KF+ +P++Y AII Q+R+++M LLT TV Sbjct: 91 KFVGECKFRSNPKSYEAAIIEQNREKVMGLLTYPTV 126 >sptr|Q9Y7B2|Q9Y7B2 Chorismate mutase (EC 5.4.99.5). Length = 267 Score = 81.6 bits (200), Expect = 1e-14 Identities = 48/122 (39%), Positives = 69/122 (56%) Frame = -1 Query: 700 NAGSSALXXXTCLQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVE 521 N GS+A +CLQ SRRI +GKF +KFQ+ E + I A DR ++ +T VE Sbjct: 145 NYGSAATCDVSCLQALSRRIHFGKFVAESKFQKETEKFVALIKAGDRKEIDEAITDAKVE 204 Query: 520 RAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLR 341 + V R+ KAK +G + G ++ P KI V ++Y ++PLTK VEV YL++ Sbjct: 205 QKVLERLALKAKTYGTDP--GFPEQSGP---KIDVQAVQDMYKEYVIPLTKVVEVEYLMQ 259 Query: 340 RL 335 RL Sbjct: 260 RL 261 >sw|O13739|CHMU_SCHPO Probable chorismate mutase (EC 5.4.99.5) (CM). Length = 251 Score = 80.9 bits (198), Expect = 2e-14 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 1/155 (0%) Frame = -1 Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSD-GNAGSSALXXXTCLQXXSRRIXYGKFXX 620 HP ++N+ + Y + +P D N GS+ + CLQ SRRI YGKF Sbjct: 103 HPN--NVNVNSEILEYYINEIVPKISSPGDDFDNYGSTVVCDIRCLQSLSRRIHYGKFVA 160 Query: 619 XAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGS 440 AK+ +PE Y I+A+D + N + E V R+ KA +G++ K Sbjct: 161 EAKYLANPEKYKKLILARDIKGIENEIVDAAQEERVLKRLHYKALNYGRDAADPTK---- 216 Query: 439 PPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRL 335 P +I VA +Y ++P+TK+VEV YLL RL Sbjct: 217 -PSDRINADCVASIYKDYVIPMTKKVEVDYLLARL 250 >sptr|Q9P4D8|Q9P4D8 Chorismate mutase (EC 5.4.99.5). Length = 280 Score = 78.6 bits (192), Expect = 9e-14 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 2/154 (1%) Frame = -1 Query: 787 AXSINIXXXXWKMYFDXXLPXXXXXXSD--GNAGSSALXXXTCLQXXSRRIXYGKFXXXA 614 A IN+ K+Y +P + N GS A+ CLQ SRRI +G+F A Sbjct: 106 ADEINVNKEILKIYTSEIVPGIAAGSGEQEDNLGSCAMADIECLQSLSRRIHFGRFVAEA 165 Query: 613 KFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPP 434 KF + I +D + + L+T VE+ + R+ K + +G + + Sbjct: 166 KFISEGDKIVDLIKKRDVEGIEALITNAEVEKRILDRLLEKGRAYGTDPTLKFTQHIQS- 224 Query: 433 VYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 K++P ++ ++Y ++PLTK+VEV YLLRRL+ Sbjct: 225 --KVKPEVIVKIYKDFVIPLTKKVEVDYLLRRLE 256 >sptr|Q96VZ8|Q96VZ8 Chorismate mutase. Length = 295 Score = 78.2 bits (191), Expect = 1e-13 Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 14/169 (8%) Frame = -1 Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXS-------DGNAGSSALXXXTCLQXXSRRIX 638 HP S+N+ + Y + +P DGN GSSA LQ SRRI Sbjct: 114 HP---SVNVNSRILRFYVEHIVPGITGAGKGKTESEDDGNYGSSATRDVEVLQALSRRIH 170 Query: 637 YGKFXXXAKFQESPEAYTPAIIAQ--DRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVN 464 +G F +KF +P + P I+A + + L L+T VE + R+ KA+++G E++ Sbjct: 171 FGMFVSESKFLAAPHNFIPHILASPPNTEALAGLITKPAVEAKLLVRLANKARVYGCEMD 230 Query: 463 IGAK-----DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD 332 + + D+ KI + V +Y ++PLTK+VEV YL+ RLD Sbjct: 231 VDGRLIEVPDEEMGARGKIDLASVVGMYKDWVIPLTKDVEVDYLIHRLD 279 >sptr|O22410|O22410 Cytosolic chorismate mutase 2 (Fragment). Length = 82 Score = 54.7 bits (130), Expect = 1e-06 Identities = 27/62 (43%), Positives = 30/62 (48%) Frame = -1 Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYGKFXXX 617 HP A +INI W Y + LP DGN +A CLQ SRRI YGKF Sbjct: 21 HPTAAAININETIWDAYVNQLLPLFTTEGDDGNYVPTATSDLQCLQAISRRIHYGKFVAE 80 Query: 616 AK 611 AK Sbjct: 81 AK 82 >sptr|O22409|O22409 Plastidic chorismate mutase 1 (Fragment). Length = 70 Score = 48.1 bits (113), Expect = 1e-04 Identities = 23/57 (40%), Positives = 28/57 (49%) Frame = -1 Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRI 641 Y HP SINI W MYF +P DGN G++A+ CLQ S+RI Sbjct: 14 YPQVLHPVTESININSKIWDMYFRNLVPRLVKEGEDGNYGATAVCDTICLQALSKRI 70 >sptr|Q8R9N8|Q8R9N8 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes. Length = 501 Score = 33.5 bits (75), Expect = 3.4 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 482 DLGFGLHPVFDSTLHRXXCEKVHELITVLGYYGWRV 589 D+G G + VF T H +K+H T+ +Y WR+ Sbjct: 212 DVGIGTYQVFQETYHHETYKKLHPEGTIKSHYQWRL 247 >sptr|Q9DWH3|Q9DWH3 Pr5. Length = 629 Score = 32.3 bits (72), Expect = 7.7 Identities = 26/62 (41%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +1 Query: 334 PAS*ASTRPQPPWLAA*FCSCTARRPSSA*SCRPVGCPCP*HQCSPLARRSWL--WPPPC 507 PAS S R W A+ SCT RR SS +CR G P SP RS W PP Sbjct: 493 PASGGSARGPTTWPASTAASCTTRRSSS--TCR--GAARPRDGSSPTPARSGRCPWSPPW 548 Query: 508 VR 513 R Sbjct: 549 PR 550 Database: /db/trembl-ebi/tmp/swall Posted date: Jul 11, 2003 8:27 PM Number of letters in database: 374,381,506 Number of sequences in database: 1,165,242 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 516,930,866 Number of Sequences: 1165242 Number of extensions: 11332192 Number of successful extensions: 22843 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 22175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22828 length of database: 374,381,506 effective HSP length: 121 effective length of database: 233,387,224 effective search space used: 37575343064 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
S1: 41 (21.7 bits)