blastx2448753.2.1.n.xseq.html

BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2448753.2.1
         (537 letters)

Database: /db/trembl-ebi/tmp/swall 
           1,165,242 sequences; 374,381,506 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

   sptr|Q9FNR1|Q9FNR1 Similarity to RNA binding protein (AT5g61030/...   132  3e-30
   sptr|Q941H9|Q941H9 RNA-binding protein precursor.                     130  9e-30
   sptr|Q40436|Q40436 RNA-binding glycine rich protein (RGP-2).          129  1e-29
   sptr|Q941H8|Q941H8 RNA-binding protein precursor.                     128  3e-29
   sptr|P93486|P93486 Glycine-rich RNA-binding protein PsGRBP.           128  4e-29
   sptr|O23793|O23793 RNA binding protein.                               127  9e-29
   sptr|Q40437|Q40437 RGP-3 (Fragment).                                  127  9e-29
   sptr|Q9C909|Q9C909 Putative RNA-binding protein (At1g74230).          125  3e-28
   sptrnew|AAN72208|AAN72208 Glycine-rich RNA-binding protein AtGRP...   120  1e-26
   sw|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho...   120  1e-26
   sptr|Q8S652|Q8S652 Putative RNA-binding protein.                      119  2e-26
   sptr|O24188|O24188 OsGRP2 (Putative glycine-rich RNA-binding pro...   112  2e-24
   sptr|Q9LIS2|Q9LIS2 Glycine-rich RNA binding protein-like (AT3g23...   111  5e-24
   sptr|Q8LDS0|Q8LDS0 Glycine-rich RNA binding protein, putative.        110  7e-24
   sptr|Q8LPB0|Q8LPB0 Glycine-rich RNA-binding protein.                  100  1e-20
   sptr|O48554|O48554 Glycine-rich RNA binding protein.                   99  2e-20
   sptr|Q8RVA3|Q8RVA3 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8S2X9|Q8S2X9 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8RUB3|Q8RUB3 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8S2Y7|Q8S2Y7 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8S2X4|Q8S2X4 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8S2Y2|Q8S2Y2 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8S2Y1|Q8S2Y1 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8S2Y8|Q8S2Y8 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8S2Y3|Q8S2Y3 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8RVC1|Q8RVC1 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q8S2Y6|Q8S2Y6 Glycine-rich RNA binding protein (Fragment).        99  2e-20
   sptr|Q9SWA8|Q9SWA8 Glycine-rich RNA-binding protein.                   99  2e-20
   sptr|Q8S2Y0|Q8S2Y0 Glycine-rich RNA binding protein (Fragment).        99  3e-20
   sptr|Q8S2Y4|Q8S2Y4 Glycine-rich RNA binding protein (Fragment).        99  3e-20

>sptr|Q9FNR1|Q9FNR1 Similarity to RNA binding protein
           (AT5g61030/maf19_30).
          Length = 309

 Score =  132 bits (331), Expect = 3e-30
 Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKS------SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
           M   +K G +LK  T+ +       S+ S++QAIRCMSSSKLF+GG++Y  D+ SLR+ F
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60

Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERT 385
            KYG+V++ ++ILDRE+GRSRGFGF+T+T        I A+DG+ L GR ++VN+AN+RT
Sbjct: 61  TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRT 120

Query: 386 GG 391
            G
Sbjct: 121 SG 122


>sptr|Q941H9|Q941H9 RNA-binding protein precursor.
          Length = 277

 Score =  130 bits (327), Expect = 9e-30
 Identities = 67/124 (54%), Positives = 88/124 (70%), Gaps = 7/124 (5%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKS------SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
           M   N++G +LK + S  S      SN S++QAIR MSSSKLFVGGLSYGTD+ SL++ F
Sbjct: 1   MAFFNRVGSILKQSVSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAF 60

Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE-R 382
           ++YG VIEA++I+DR++GRSRGFGFI++         + AMDG+ L GR IRVN+A E R
Sbjct: 61  SQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYATEKR 120

Query: 383 TGGF 394
             GF
Sbjct: 121 RAGF 124


>sptr|Q40436|Q40436 RNA-binding glycine rich protein (RGP-2).
          Length = 259

 Score =  129 bits (325), Expect = 1e-29
 Identities = 63/122 (51%), Positives = 88/122 (72%), Gaps = 6/122 (4%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKS------SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
           M   NK+G +LK   S  +      S  S+YQAIR MSSSKLFVGGLS+GTD+ SL++ F
Sbjct: 1   MAFVNKIGNMLKQIVSRHANLELCASRTSLYQAIRSMSSSKLFVGGLSWGTDETSLKEAF 60

Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERT 385
           +++G+VIEA++I+DR++GRSRGFGF+++T        +TA+DG+ L GR IRVN+A E+ 
Sbjct: 61  SQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEKL 120

Query: 386 GG 391
            G
Sbjct: 121 RG 122


>sptr|Q941H8|Q941H8 RNA-binding protein precursor.
          Length = 339

 Score =  128 bits (322), Expect = 3e-29
 Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 7/124 (5%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKS------SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
           M   NK+G +LK+     +      SN S++Q IR MSSSKLFVGGLSYGTD+ SL++ F
Sbjct: 1   MAFLNKIGNILKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETF 60

Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE-R 382
           ++YG+VIEA++ILDRE+GRSRGFGFI++         + AMDG+ L GR I+VN+A E R
Sbjct: 61  SQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYATEKR 120

Query: 383 TGGF 394
             GF
Sbjct: 121 RDGF 124


>sptr|P93486|P93486 Glycine-rich RNA-binding protein PsGRBP.
          Length = 146

 Score =  128 bits (321), Expect = 4e-29
 Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = +2

Query: 44  MMLANKLGGLLKNAT--SSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
           M   NKLG LL+     SS +   S+   +R MSSSKLF+GGLSYG DD SL+D FA YG
Sbjct: 1   MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYG 60

Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
           +V+EA++I DR++GRSRGFGF+ +T        ++AMDG+ L+GRNIRV++AN+R
Sbjct: 61  EVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDR 115


>sptr|O23793|O23793 RNA binding protein.
          Length = 144

 Score =  127 bits (318), Expect = 9e-29
 Identities = 69/125 (55%), Positives = 88/125 (70%), Gaps = 8/125 (6%)
 Frame = +2

Query: 44  MMLANKLGGLLK-----NATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFA 208
           M   NKLGGLL+     NA S+ S   S+  A+RCMS+ KLFVGGLS+GTDD SLRD FA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVSATSPMPSMLDAVRCMST-KLFVGGLSWGTDDQSLRDAFA 59

Query: 209 KYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE--- 379
            +G V++A++I+DR+SGRSRGFGF+ ++        I AMDG+ L GRNIRV+ A E   
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAP 119

Query: 380 RTGGF 394
           R+GGF
Sbjct: 120 RSGGF 124


>sptr|Q40437|Q40437 RGP-3 (Fragment).
          Length = 144

 Score =  127 bits (318), Expect = 9e-29
 Identities = 69/125 (55%), Positives = 87/125 (69%), Gaps = 8/125 (6%)
 Frame = +2

Query: 44  MMLANKLGGLLK-----NATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFA 208
           M   NKLGGLL+     NA S+ S   S+  A+RCMS+ KLFVGGLS+GTDD SLRD FA
Sbjct: 1   MAFYNKLGGLLRQSISGNAVSATSPMKSMLDAVRCMST-KLFVGGLSWGTDDQSLRDAFA 59

Query: 209 KYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE--- 379
            +G V++A++I+DR+SGRSRGFGF+ ++        I AMDG+ L GRNIRV  A E   
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQERAP 119

Query: 380 RTGGF 394
           R+GGF
Sbjct: 120 RSGGF 124


>sptr|Q9C909|Q9C909 Putative RNA-binding protein (At1g74230).
          Length = 289

 Score =  125 bits (314), Expect = 3e-28
 Identities = 60/117 (51%), Positives = 84/117 (71%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
           M   +K+G L    +S  +++ S+ Q+IRCMSSSK+FVGG+SY TD+  LR+ F+KYG+V
Sbjct: 1   MAFLSKVGRLFSQTSSHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 60

Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGF 394
           ++AKII+DRE+GRSRGF F+T+T        +  +DG+ L GR IRVN+A ER  GF
Sbjct: 61  VDAKIIVDRETGRSRGFAFVTFTSTEEASNAM-QLDGQDLHGRRIRVNYATERGSGF 116


>sptrnew|AAN72208|AAN72208 Glycine-rich RNA-binding protein
           AtGRP2-like.
          Length = 158

 Score =  120 bits (300), Expect = 1e-26
 Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
           M   NKLGGLL+   SS  +    S+  ++R MS+ KLF+GGLS+GTDD SLRD FA +G
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAFAHFG 59

Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
            V++AK+I+DRE+GRSRGFGF+ +         I+ MDGK L+GR+IRVN AN+R
Sbjct: 60  DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114


>sw|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2,
           mitochondrial precursor (AtGRP2).
          Length = 158

 Score =  120 bits (300), Expect = 1e-26
 Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
           M   NKLGGLL+   SS  +    S+  ++R MS+ KLF+GGLS+GTDD SLRD FA +G
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAFAHFG 59

Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
            V++AK+I+DRE+GRSRGFGF+ +         I+ MDGK L+GR+IRVN AN+R
Sbjct: 60  DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114


>sptr|Q8S652|Q8S652 Putative RNA-binding protein.
          Length = 119

 Score =  119 bits (299), Expect = 2e-26
 Identities = 56/99 (56%), Positives = 73/99 (73%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
           M    K+G L++ +  S S    ++QA+RCMSSSKLF+GG+SYGTDD SL++ FA YG+V
Sbjct: 1   MAFLRKVGNLVRQSAGSGSP---LFQAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEV 57

Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKT 340
           IEA++I+DR +GRSRGFGF+TYT        IT MDGKT
Sbjct: 58  IEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKT 96


>sptr|O24188|O24188 OsGRP2 (Putative glycine-rich RNA-binding
           protein 2).
          Length = 150

 Score =  112 bits (281), Expect = 2e-24
 Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
 Frame = +2

Query: 44  MMLANKLGGLLKNA----TSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAK 211
           M   NKLG  L+++    ++S  S+ +++ A R MS+ KLFVGGLS+ T+D SL++ F  
Sbjct: 1   MAAFNKLGSFLRHSGLTSSASAGSSPAMFNAARLMST-KLFVGGLSWNTNDDSLKEAFTS 59

Query: 212 YGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGG 391
           +G V EA++I DRESGRSRGFGF+++         + AMDGK L+GR+IRVN ANER  G
Sbjct: 60  FGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNFANERPPG 119

Query: 392 FR 397
            R
Sbjct: 120 NR 121


>sptr|Q9LIS2|Q9LIS2 Glycine-rich RNA binding protein-like
           (AT3g23830/F14O13_2).
          Length = 136

 Score =  111 bits (277), Expect = 5e-24
 Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
           M   NKL G+L+   S  S+    S+  ++R MSS KLFVGGLS+GTDD SL+  F  +G
Sbjct: 1   MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYMSS-KLFVGGLSWGTDDSSLKQAFTSFG 59

Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
           +V EA +I DRE+GRSRGFGF++++        I  MDGK L+GR IRVN A ER+   R
Sbjct: 60  EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 119


>sptr|Q8LDS0|Q8LDS0 Glycine-rich RNA binding protein, putative.
          Length = 136

 Score =  110 bits (276), Expect = 7e-24
 Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
 Frame = +2

Query: 44  MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
           M   NKL G+L+   S  S+    S+  ++R MSS KLFVGGLS+GTDD SL+  F  +G
Sbjct: 1   MAFCNKLSGILRQGVSHSSNGPVTSMLGSLRYMSS-KLFVGGLSWGTDDSSLKQAFTSFG 59

Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
           +V EA +I DRE+GRSRGFGF++++        I  MDGK L+GR IRVN A ER+   R
Sbjct: 60  EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 119


>sptr|Q8LPB0|Q8LPB0 Glycine-rich RNA-binding protein.
          Length = 155

 Score =  100 bits (248), Expect = 1e-20
 Identities = 50/122 (40%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
 Frame = +2

Query: 44  MMLANKLGGLLKNAT--------SSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRD 199
           M    +LGGL++ +         SS ++  +++   R MS SKLFVGGL++GT D ++++
Sbjct: 1   MAFLAQLGGLVRQSIARNALQRHSSAAAIPAMFLVSRGMSGSKLFVGGLAWGTTDDNIKE 60

Query: 200 EFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE 379
            F+ +G+V E KII DR++GRSRGFGF+T+         + A+DG+ L GR IRVN+A +
Sbjct: 61  AFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGRDLAGRTIRVNYATK 120

Query: 380 RT 385
           ++
Sbjct: 121 QS 122


>sptr|O48554|O48554 Glycine-rich RNA binding protein.
          Length = 145

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 9   RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 69  MNGKELDGRNITVNEAQSRGG 89


>sptr|Q8RVA3|Q8RVA3 Glycine-rich RNA binding protein (Fragment).
          Length = 148

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 12  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 72  MNGKELDGRNITVNEAQSRGG 92


>sptr|Q8S2X9|Q8S2X9 Glycine-rich RNA binding protein (Fragment).
          Length = 149

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 13  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 72

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 73  MNGKELDGRNITVNEAQSRGG 93


>sptr|Q8RUB3|Q8RUB3 Glycine-rich RNA binding protein (Fragment).
          Length = 149

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 12  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 72  MNGKELDGRNITVNEAQSRGG 92


>sptr|Q8S2Y7|Q8S2Y7 Glycine-rich RNA binding protein (Fragment).
          Length = 139

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 3   RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 63  MNGKELDGRNITVNEAQSRGG 83


>sptr|Q8S2X4|Q8S2X4 Glycine-rich RNA binding protein (Fragment).
          Length = 150

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 14  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 73

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 74  MNGKELDGRNITVNEAQSRGG 94


>sptr|Q8S2Y2|Q8S2Y2 Glycine-rich RNA binding protein (Fragment).
          Length = 147

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 11  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 70

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 71  MNGKELDGRNITVNEAQSRGG 91


>sptr|Q8S2Y1|Q8S2Y1 Glycine-rich RNA binding protein (Fragment).
          Length = 155

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 18  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 78  MNGKELDGRNITVNEAQSRGG 98


>sptr|Q8S2Y8|Q8S2Y8 Glycine-rich RNA binding protein (Fragment).
          Length = 155

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 19  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 79  MNGKELDGRNITVNEAQSRGG 99


>sptr|Q8S2Y3|Q8S2Y3 Glycine-rich RNA binding protein (Fragment).
          Length = 155

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 18  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 78  MNGKELDGRNITVNEAQSRGG 98


>sptr|Q8RVC1|Q8RVC1 Glycine-rich RNA binding protein (Fragment).
          Length = 154

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 18  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 78  MNGKELDGRNITVNEAQSRGG 98


>sptr|Q8S2Y6|Q8S2Y6 Glycine-rich RNA binding protein (Fragment).
          Length = 156

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 19  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 79  MNGKELDGRNITVNEAQSRGG 99


>sptr|Q9SWA8|Q9SWA8 Glycine-rich RNA-binding protein.
          Length = 160

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 45/82 (54%), Positives = 59/82 (71%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDH+L   F++YG+++E KII DRE+GRSRGFGF+T+         I A
Sbjct: 9   RCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGA 68

Query: 326 MDGKTLDGRNIRVNHANERTGG 391
           M+G+ LDGRNI VN A  R GG
Sbjct: 69  MNGQNLDGRNITVNEAQSRGGG 90


>sptr|Q8S2Y0|Q8S2Y0 Glycine-rich RNA binding protein (Fragment).
          Length = 153

 Score = 99.0 bits (245), Expect = 3e-20
 Identities = 48/81 (59%), Positives = 61/81 (75%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 16  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSAIEG 75

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 76  MNGKELDGRNITVNEAQSRGG 96


>sptr|Q8S2Y4|Q8S2Y4 Glycine-rich RNA binding protein (Fragment).
          Length = 148

 Score = 99.0 bits (245), Expect = 3e-20
 Identities = 49/81 (60%), Positives = 62/81 (76%)
 Frame = +2

Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
           + FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++        I  
Sbjct: 12  RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 71

Query: 326 MDGKTLDGRNIRVNHANERTG 388
           M+GK LDGRNI VN A  R G
Sbjct: 72  MNGKELDGRNITVNEAQSRGG 92


  Database: /db/trembl-ebi/tmp/swall
    Posted date:  Jul 11, 2003  8:27 PM
  Number of letters in database: 374,381,506
  Number of sequences in database:  1,165,242
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,212,940
Number of Sequences: 1165242
Number of extensions: 4080059
Number of successful extensions: 14943
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14629
length of database: 374,381,506
effective HSP length: 114
effective length of database: 241,543,918
effective search space used: 15458810752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)