BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276392.2.1
(644 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sw|P41098|RL34_TOBAC 60S ribosomal protein L34. 177 7e-44
sw|P40590|RL34_PEA 60S ribosomal protein L34. 176 2e-43
sptrnew|AAM51402|AAM51402 Putative 60S ribosomal protein L34. 174 8e-43
sptrnew|AAL85030|AAL85030 Putative 60s ribosomal protein L34. 174 8e-43
sw|Q42351|RL34_ARATH 60S ribosomal protein L34. 174 8e-43
sptr|Q8L9D3|Q8L9D3 60s ribosomal protein L34. 173 2e-42
sptr|Q9LJW6|Q9LJW6 60S ribosomal protein L34 (Putative 60S ribos... 172 2e-42
sptr|Q9FE65|Q9FE65 Putative 60S ribosomal protein L34 (60S ribos... 172 3e-42
sptr|Q84XZ0|Q84XZ0 60S ribosomal protein L34 (Fragment). 142 3e-33
sptrnew|EAA05780|EAA05780 AgCP10269 (Fragment). 107 2e-22
sptr|Q8WQI6|Q8WQI6 Ribosomal protein L34. 106 2e-22
sw|O42846|RL34_SCHPO 60S ribosomal protein L34. 105 6e-22
sptr|Q9URT8|Q9URT8 60s ribosomal protein L34. 104 1e-21
sptr|Q9VHE5|Q9VHE5 CG9354 protein (RH48056p). 103 2e-21
sptr|Q8SYG0|Q8SYG0 RE63456p. 103 2e-21
sptr|Q9VBH8|Q9VBH8 CG6090 protein. 103 2e-21
sptr|Q95X53|Q95X53 Hypothetical 12.7 kDa protein. 101 9e-21
sw|P45842|RL34_AEDAL 60S ribosomal protein L34 (L31). 100 2e-20
sw|Q9NB34|RL34_AEDTR 60S ribosomal protein L34. 100 2e-20
sptrnew|EAA33882|EAA33882 Hypothetical protein ( (AF378548) ribo... 99 6e-20
sptr|Q86QS2|Q86QS2 Ribosomal protein L34. 93 3e-18
sw|P87262|R34A_YEAST 60S ribosomal protein L34-A. 93 3e-18
sw|P40525|R34B_YEAST 60S ribosomal protein L34-B. 92 4e-18
sptr|Q8IBY4|Q8IBY4 60S ribosomal protein L34-a, putative. 92 5e-18
sptr|Q96W42|Q96W42 Ribosomal protein L34-like protein. 92 7e-18
sptrnew|EAA16795|EAA16795 Ribosomal protein L34e, putative. 89 5e-17
sptrnew|AAH53736|AAH53736 Hypothetical protein. 88 1e-16
sptr|Q7ZWJ7|Q7ZWJ7 Similar to ribosomal protein L34. 86 3e-16
sw|Q9D1R9|RL34_MOUSE 60S ribosomal protein L34. 85 7e-16
sw|P49207|RL34_HUMAN 60S ribosomal protein L34. 84 2e-15
>sw|P41098|RL34_TOBAC 60S ribosomal protein L34.
Length = 120
Score = 177 bits (450), Expect = 7e-44
Identities = 86/95 (90%), Positives = 91/95 (95%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRLTYRKRHSYATKSNQ RVVKTPGGKL+YQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
EYKRSRL+RN+RTVNR YGGVLSG+AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>sw|P40590|RL34_PEA 60S ribosomal protein L34.
Length = 120
Score = 176 bits (446), Expect = 2e-43
Identities = 89/115 (77%), Positives = 94/115 (81%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRLTYR+RHSYATKSNQ RVVKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAFXXXXXXXXXXXXXXXXTKDK 406
EYKRSRL+RN+RTVNR YGGVLSG AVRERIIRAF TK+K
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEK 115
>sptrnew|AAM51402|AAM51402 Putative 60S ribosomal protein L34.
Length = 120
Score = 174 bits (441), Expect = 8e-43
Identities = 84/95 (88%), Positives = 90/95 (94%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
EYKRSRL+RN+RTVNR YGGVLSG+AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>sptrnew|AAL85030|AAL85030 Putative 60s ribosomal protein L34.
Length = 120
Score = 174 bits (441), Expect = 8e-43
Identities = 84/95 (88%), Positives = 90/95 (94%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
EYKRSRL+RN+RTVNR YGGVLSG+AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>sw|Q42351|RL34_ARATH 60S ribosomal protein L34.
Length = 120
Score = 174 bits (441), Expect = 8e-43
Identities = 84/95 (88%), Positives = 90/95 (94%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKKRASGPKCPVTGK+IQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
EYKRSRL+RN+RTVNR YGGVLSG+AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>sptr|Q8L9D3|Q8L9D3 60s ribosomal protein L34.
Length = 120
Score = 173 bits (438), Expect = 2e-42
Identities = 83/95 (87%), Positives = 90/95 (94%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKK+ASGPKCPVTGK+IQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKKASGPKCPVTGKRIQGIPHLRPS 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
EYKRSRL+RN+RTVNR YGGVLSG+AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>sptr|Q9LJW6|Q9LJW6 60S ribosomal protein L34 (Putative 60S
ribosomal protein L34).
Length = 120
Score = 172 bits (437), Expect = 2e-42
Identities = 83/95 (87%), Positives = 87/95 (91%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRL YR RHSYATKSNQ R+VKTPGGKL YQ T KRASGPKCPVTGK+IQGIPHLRPA
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
EYKRSRLARN+RTVNR YGGVLSG AVRERI+RAF
Sbjct: 61 EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95
>sptr|Q9FE65|Q9FE65 Putative 60S ribosomal protein L34 (60S
ribosomal protein L34, putative) (T6C23.18)
(F24J1.23/F24J1.23).
Length = 119
Score = 172 bits (436), Expect = 3e-42
Identities = 83/95 (87%), Positives = 88/95 (92%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRL YR RHSYATKSNQ R+VKTPGGKL YQ TKKRASGPKCPVTGK+IQGIPHLRP
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
EYKRSRL+RN+RTVNR YGGVLSG+AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>sptr|Q84XZ0|Q84XZ0 60S ribosomal protein L34 (Fragment).
Length = 102
Score = 142 bits (358), Expect = 3e-33
Identities = 75/102 (73%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
Frame = +2
Query: 116 QTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAEYKRSRLARNQRTVNRPY 295
Q RVVKTPGGKLVY+ TKKRASGPKCPVTGK+IQGIPHLRPAEYKRSRL RN+RTV RPY
Sbjct: 1 QRRVVKTPGGKLVYRSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVTRPY 60
Query: 296 GGVLSGTAVRERIIRAFXXXXXXXXXXXXXXXXTKDK-ASKS 418
GGVLSG AVRERIIRAF K+K ASKS
Sbjct: 61 GGVLSGIAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 102
>sptrnew|EAA05780|EAA05780 AgCP10269 (Fragment).
Length = 137
Score = 107 bits (266), Expect = 2e-22
Identities = 56/96 (58%), Positives = 69/96 (71%)
Frame = +2
Query: 59 KMVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRP 238
KMVQRLT R+R SY TKSN+ R+V+TPGG+LVYQY KKR + PKC K++ GI RP
Sbjct: 3 KMVQRLTLRRRLSYNTKSNKRRIVRTPGGRLVYQYVKKRRTLPKCGQCKKELNGIKPSRP 62
Query: 239 AEYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
E R R++R +TV R +GGVL +RERIIRAF
Sbjct: 63 CE--RPRMSRRLKTVTRTFGGVLCHHCLRERIIRAF 96
>sptr|Q8WQI6|Q8WQI6 Ribosomal protein L34.
Length = 119
Score = 106 bits (265), Expect = 2e-22
Identities = 55/95 (57%), Positives = 68/95 (71%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRLT+R+R SY TKSNQ R+V+TPGG+LVYQY KK P+C K++GI RPA
Sbjct: 1 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
E RSRL ++TV R YGGVL V++RI+RAF
Sbjct: 61 E--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 93
>sw|O42846|RL34_SCHPO 60S ribosomal protein L34.
Length = 112
Score = 105 bits (261), Expect = 6e-22
Identities = 50/95 (52%), Positives = 70/95 (73%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
M QR+TYR+R +Y T+SN+TR++KTPG + Y + KK + P+C TG +QGIP LRP
Sbjct: 1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPR 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
E+ +RL+ N++TV R YGG LS AV++RI+RAF
Sbjct: 61 EF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93
>sptr|Q9URT8|Q9URT8 60s ribosomal protein L34.
Length = 111
Score = 104 bits (259), Expect = 1e-21
Identities = 50/95 (52%), Positives = 69/95 (72%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
M QR+TYR+R +Y T+SN+TR++KTPG + Y + KK + P+C TG +QGIP LRP
Sbjct: 1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPR 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
E+ +RL+ NQ+ V R YGG LS AV++RI+RAF
Sbjct: 61 EF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93
>sptr|Q9VHE5|Q9VHE5 CG9354 protein (RH48056p).
Length = 168
Score = 103 bits (257), Expect = 2e-21
Identities = 51/95 (53%), Positives = 71/95 (74%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRLT R+R SY T+SN+ R+V+TPGG+LVYQY KK + P+C +K++GI RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
E R R+++ +TV+R YGGVL + +RERI+RAF
Sbjct: 61 E--RPRMSKRLKTVSRTYGGVLCHSCLRERIVRAF 93
>sptr|Q8SYG0|Q8SYG0 RE63456p.
Length = 162
Score = 103 bits (256), Expect = 2e-21
Identities = 51/95 (53%), Positives = 70/95 (73%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRLT R+R SY T+SN+ R+V+TPGG+LVYQY KK + P+C +K+ GI RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPS 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
E R R+++ +TV+R YGGVL + +RERI+RAF
Sbjct: 61 E--RPRMSKRLKTVSRTYGGVLCHSCLRERIVRAF 93
>sptr|Q9VBH8|Q9VBH8 CG6090 protein.
Length = 162
Score = 103 bits (256), Expect = 2e-21
Identities = 51/95 (53%), Positives = 70/95 (73%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRLT R+R SY T+SN+ R+V+TPGG+LVYQY KK + P+C +K+ GI RP+
Sbjct: 1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
E R R+++ +TV+R YGGVL + +RERI+RAF
Sbjct: 61 E--RPRMSKRLKTVSRTYGGVLCHSCLRERIVRAF 93
>sptr|Q95X53|Q95X53 Hypothetical 12.7 kDa protein.
Length = 110
Score = 101 bits (251), Expect = 9e-21
Identities = 55/95 (57%), Positives = 64/95 (67%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
M R+TYR+R SY T SN+ R+VKTPGG+LV QY KKR PKC TG K+ GI RP
Sbjct: 1 MSLRVTYRRRLSYNTTSNKKRLVKTPGGRLVVQYIKKRGQIPKCRDTGVKLHGITPARPI 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
+ L RN+RTV R YGG LS AV+ERI RAF
Sbjct: 61 ALR--LLKRNERTVTRAYGGCLSPNAVKERITRAF 93
>sw|P45842|RL34_AEDAL 60S ribosomal protein L34 (L31).
Length = 129
Score = 100 bits (248), Expect = 2e-20
Identities = 53/94 (56%), Positives = 66/94 (70%)
Frame = +2
Query: 65 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAE 244
VQRLT R+R SY TKSN+ RVV+TPGG+LVY Y KK+ + PKC +K+ GI RP+E
Sbjct: 1 VQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE 60
Query: 245 YKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
R R+ R +TV R +GGVL +RERIIRAF
Sbjct: 61 --RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 92
>sw|Q9NB34|RL34_AEDTR 60S ribosomal protein L34.
Length = 138
Score = 100 bits (248), Expect = 2e-20
Identities = 53/94 (56%), Positives = 66/94 (70%)
Frame = +2
Query: 65 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAE 244
VQRLT R+R SY TKSN+ RVV+TPGG+LVY Y KK+ + PKC +K+ GI RP+E
Sbjct: 1 VQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE 60
Query: 245 YKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
R R+ R +TV R +GGVL +RERIIRAF
Sbjct: 61 --RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 92
>sptrnew|EAA33882|EAA33882 Hypothetical protein ( (AF378548)
ribosomal protein L34-like protein.
Length = 117
Score = 98.6 bits (244), Expect = 6e-20
Identities = 47/92 (51%), Positives = 66/92 (71%)
Frame = +2
Query: 71 RLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAEYK 250
R+TYR+R+ Y T SN+TR+VKTPGG+L + KKR + PKC G K+ G+P LRP EY
Sbjct: 5 RVTYRRRNPYNTTSNKTRIVKTPGGQLRVLHIKKRGTAPKCGDCGIKLPGVPALRPREY- 63
Query: 251 RSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
++L++ ++TV R YGG G VR+R++RAF
Sbjct: 64 -AQLSKPKKTVQRAYGGSRCGNCVRDRVVRAF 94
>sptr|Q86QS2|Q86QS2 Ribosomal protein L34.
Length = 118
Score = 92.8 bits (229), Expect = 3e-18
Identities = 51/95 (53%), Positives = 61/95 (64%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
MVQRLTYR+R SY TKSN+ R+ KTPGGKLVY YTKK+ S P C K+ G+ RP
Sbjct: 1 MVQRLTYRRRLSYNTKSNRRRISKTPGGKLVYLYTKKKGSVPVCGDCKVKLFGVKAPRPK 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
K ++R + V R YGG VRERI+RAF
Sbjct: 61 --KLMSMSRRLKHVTRAYGGSRCSKCVRERIVRAF 93
>sw|P87262|R34A_YEAST 60S ribosomal protein L34-A.
Length = 121
Score = 92.8 bits (229), Expect = 3e-18
Identities = 47/95 (49%), Positives = 65/95 (68%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q+ KK A+ PKC G +QGI LRP
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPR 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
+Y + +++ +TV+R YGG V+ERIIRAF
Sbjct: 61 QY--ATVSKTHKTVSRAYGGSRCANCVKERIIRAF 93
>sw|P40525|R34B_YEAST 60S ribosomal protein L34-B.
Length = 121
Score = 92.4 bits (228), Expect = 4e-18
Identities = 46/95 (48%), Positives = 65/95 (68%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q+ KK A+ PKC G +QGI LRP
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPR 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
+Y + +++ +TV+R YGG V+ERI+RAF
Sbjct: 61 QY--ATVSKTHKTVSRAYGGSRCANCVKERIVRAF 93
>sptr|Q8IBY4|Q8IBY4 60S ribosomal protein L34-a, putative.
Length = 150
Score = 92.0 bits (227), Expect = 5e-18
Identities = 48/95 (50%), Positives = 60/95 (63%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
M QR+ YR+ + Y TKSN+ R V+TPGGKL KK+A PKC IQG+ LRPA
Sbjct: 1 MAQRVHYRRHNHYNTKSNKVRPVRTPGGKLTIHVVKKKAGKPKCADCKTAIQGVKALRPA 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
+ R+R R RTV R YGG + +RERI+RAF
Sbjct: 61 DNYRAR--RKNRTVARAYGGSICARCIRERIMRAF 93
>sptr|Q96W42|Q96W42 Ribosomal protein L34-like protein.
Length = 113
Score = 91.7 bits (226), Expect = 7e-18
Identities = 42/92 (45%), Positives = 64/92 (69%)
Frame = +2
Query: 71 RLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPAEYK 250
R+ YR+R+ Y T SN+TRV+KTPGG++ + KKR + PKC G K+ G+P LRP EY
Sbjct: 5 RVVYRRRNGYNTTSNRTRVIKTPGGEIRVLHIKKRGTAPKCGDCGIKLPGVPALRPREY- 63
Query: 251 RSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
+++++ ++TV R YGG V++R++RAF
Sbjct: 64 -AQISKPKKTVQRAYGGSRCANCVQDRVVRAF 94
>sptrnew|EAA16795|EAA16795 Ribosomal protein L34e, putative.
Length = 164
Score = 89.0 bits (219), Expect = 5e-17
Identities = 45/95 (47%), Positives = 60/95 (63%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 241
M QR+ YRK + Y TKSN+ R ++TPGGKL KK+A PKC IQG+ LRPA
Sbjct: 1 MAQRVHYRKHNHYNTKSNKVRPIRTPGGKLTIHVIKKKAGKPKCADCKNPIQGVKALRPA 60
Query: 242 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
+ +R+R + R V+R YGG + +ERI+RAF
Sbjct: 61 DNQRAR--KKDRKVSRAYGGSICAKCXKERIMRAF 93
>sptrnew|AAH53736|AAH53736 Hypothetical protein.
Length = 407
Score = 87.8 bits (216), Expect = 1e-16
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = +2
Query: 59 KMVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHL 232
+MVQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK PK C V +++G+ +
Sbjct: 290 RMVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAV 349
Query: 233 RPAEYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
RP RL++ Q+ V+R YGG + VR+RI RAF
Sbjct: 350 RPKVL--MRLSKTQKHVSRAYGGSMCAKCVRDRIKRAF 385
>sptr|Q7ZWJ7|Q7ZWJ7 Similar to ribosomal protein L34.
Length = 117
Score = 86.3 bits (212), Expect = 3e-16
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Frame = +2
Query: 62 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 235
MVQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK PK C + +++GI +R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKTGKSPKSACGICPGRLRGIRAVR 60
Query: 236 PAEYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
P RL++ ++ V+R YGG + VR+RI RAF
Sbjct: 61 PQVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
>sw|Q9D1R9|RL34_MOUSE 60S ribosomal protein L34.
Length = 116
Score = 85.1 bits (209), Expect = 7e-16
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +2
Query: 65 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLRP 238
VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK PK C V +++G+ +RP
Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRP 60
Query: 239 AEYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
RL++ Q+ V+R YGG + VR+RI RAF
Sbjct: 61 KVL--MRLSKTQKHVSRAYGGSMCAKCVRDRIKRAF 94
>sw|P49207|RL34_HUMAN 60S ribosomal protein L34.
Length = 116
Score = 83.6 bits (205), Expect = 2e-15
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +2
Query: 65 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPK--CPVTGKKIQGIPHLRP 238
VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK PK C V +++G+ +RP
Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRP 60
Query: 239 AEYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 346
RL++ ++ V+R YGG + VR+RI RAF
Sbjct: 61 KVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 476,689,922
Number of Sequences: 1272877
Number of extensions: 10266801
Number of successful extensions: 28254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28201
length of database: 406,886,216
effective HSP length: 118
effective length of database: 256,686,730
effective search space used: 24641926080
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)