BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192736.2.4
(838 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptrnew|AAP54186|AAP54186 60S ribosomal protein L21. 323 1e-87
sptr|Q9AV87|Q9AV87 60S ribosomal protein L21. 323 1e-87
sptr|Q9ZSU8|Q9ZSU8 60S ribosomal protein L21. 321 9e-87
sptrnew|AAP80636|AAP80636 60s ribosomal protein L21 (Fragment). 313 2e-84
sptr|Q9FDZ9|Q9FDZ9 Putative ribosomal protein L21 (Putative 60S ... 306 2e-82
sptrnew|AAN31914|AAN31914 Putative 60S ribosomal protein L21. 305 6e-82
sptrnew|AAL15225|AAL15225 Putative 60S ribosomal protein L21. 305 6e-82
sptrnew|AAK44042|AAK44042 Putative 60S ribosomal protein L21. 305 6e-82
sptrnew|AAM10218|AAM10218 Similar to ribosomal protein L21. 305 6e-82
sptrnew|AAL24405|AAL24405 Similar to ribosomal protein L21. 305 6e-82
sw|Q43291|RL21_ARATH 60S ribosomal protein L21. 305 6e-82
sptr|Q962T7|Q962T7 Ribosomal protein L21. 179 4e-44
sw|O82574|RL21_CYAPA 60S ribosomal protein L21. 176 3e-43
sw|Q02753|R21A_YEAST 60S ribosomal protein L21-A. 167 1e-40
sw|Q12672|R21B_YEAST 60S ribosomal protein L21-B. 166 3e-40
sptr|Q9V9M7|Q9V9M7 Ribosomal protein L21 (RE62581p) (RH06526p). 166 4e-40
sw|O42706|R21B_SCHPO 60S ribosomal protein L21-B. 162 7e-39
sw|Q9UUC1|R21A_SCHPO 60S ribosomal protein L21-A. 162 7e-39
sptrnew|EAA00465|EAA00465 AgCP9782 (Fragment). 161 9e-39
sw|P46778|RL21_HUMAN 60S ribosomal protein L21. 160 2e-38
sptr|Q9CQM8|Q9CQM8 Rpl21 protein (Ribosomal protein L21). 160 2e-38
sptr|Q90YU7|Q90YU7 Ribosomal protein L21. 160 3e-38
sptr|Q861S4|Q861S4 Similar to ribosomal protein L21 (Fragment). 159 4e-38
sptr|Q9SHE5|Q9SHE5 T19E23.15. 158 1e-37
sptrnew|EAA34996|EAA34996 Hypothetical protein. 157 2e-37
sptr|Q86QS3|Q86QS3 Ribosomal protein L21. 156 4e-37
sw|P20280|RL21_RAT 60S ribosomal protein L21. 155 5e-37
sptrnew|AAH53767|AAH53767 Hypothetical protein. 155 5e-37
sw|O09167|RL21_MOUSE 60S ribosomal protein L21. 155 6e-37
sptrnew|AAP80694|AAP80694 60S ribosome protein L21. 153 3e-36
>sptrnew|AAP54186|AAP54186 60S ribosomal protein L21.
Length = 164
Score = 323 bits (829), Expect = 1e-87
Identities = 156/164 (95%), Positives = 159/164 (96%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHGLR+RTRDLFARPFRKKGYIPLTTYLRTYKIG++VDVKVNGAVHKGMPHKFYHGR
Sbjct: 1 MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG VWNVTKRAIGVEINKQV RIIRKRIHVRVEHVQPSRCTEEFRLRK KNDQLKADAK
Sbjct: 61 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
ARGEVISTKRQP GPKPGFMVEGATLETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
>sptr|Q9AV87|Q9AV87 60S ribosomal protein L21.
Length = 164
Score = 323 bits (829), Expect = 1e-87
Identities = 156/164 (95%), Positives = 159/164 (96%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHGLR+RTRDLFARPFRKKGYIPLTTYLRTYKIG++VDVKVNGAVHKGMPHKFYHGR
Sbjct: 1 MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG VWNVTKRAIGVEINKQV RIIRKRIHVRVEHVQPSRCTEEFRLRK KNDQLKADAK
Sbjct: 61 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
ARGEVISTKRQP GPKPGFMVEGATLETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
>sptr|Q9ZSU8|Q9ZSU8 60S ribosomal protein L21.
Length = 164
Score = 321 bits (822), Expect = 9e-87
Identities = 155/164 (94%), Positives = 158/164 (96%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPA HGLR+RTRDLFARPFRKKGYIPLTTYLRTYKIG++VDVKVNGAVHKGMPHKFYHGR
Sbjct: 1 MPADHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG VWNVTKRAIGVEINKQV RIIRKRIHVRVEHVQPSRCTEEFRLRK KNDQLKADAK
Sbjct: 61 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
ARGEVISTKRQP GPKPGFMVEGATLETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
>sptrnew|AAP80636|AAP80636 60s ribosomal protein L21 (Fragment).
Length = 172
Score = 313 bits (801), Expect = 2e-84
Identities = 149/170 (87%), Positives = 156/170 (91%)
Frame = +1
Query: 46 GGRSRKMPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPH 225
GGR KMPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYK+G++VDVKVNGAVHKGMPH
Sbjct: 3 GGRKGKMPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEHVDVKVNGAVHKGMPH 62
Query: 226 KFYHGRTGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQ 405
KFYHGRTG VWNVTKRAIGVEINKQV RII+KRIHVRVEHVQPSRC EEF RK ND+
Sbjct: 63 KFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDK 122
Query: 406 LKADAKARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
L A+AKARGEVISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDL GGY
Sbjct: 123 LXAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLXGGY 172
>sptr|Q9FDZ9|Q9FDZ9 Putative ribosomal protein L21 (Putative 60S
ribosomal protein L21) (60S ribosomal protein L21,
putative) (At1g57860).
Length = 164
Score = 306 bits (785), Expect = 2e-82
Identities = 142/164 (86%), Positives = 154/164 (93%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG +WNVTKRA+GVE+NKQ+ RIIRKRIHVRVEHVQ SRC EEF+LRK +ND LKADAK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
ARGE ISTKRQP GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sptrnew|AAN31914|AAN31914 Putative 60S ribosomal protein L21.
Length = 164
Score = 305 bits (780), Expect = 6e-82
Identities = 141/164 (85%), Positives = 153/164 (93%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG +WNVTKRA+GVE+NKQ+ RIIRKRIHVRVEHVQ SRC EEF+LRK KND+LKA AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
A GE ISTKRQP GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sptrnew|AAL15225|AAL15225 Putative 60S ribosomal protein L21.
Length = 164
Score = 305 bits (780), Expect = 6e-82
Identities = 141/164 (85%), Positives = 153/164 (93%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG +WNVTKRA+GVE+NKQ+ RIIRKRIHVRVEHVQ SRC EEF+LRK KND+LKA AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
A GE ISTKRQP GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sptrnew|AAK44042|AAK44042 Putative 60S ribosomal protein L21.
Length = 164
Score = 305 bits (780), Expect = 6e-82
Identities = 141/164 (85%), Positives = 153/164 (93%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG +WNVTKRA+GVE+NKQ+ RIIRKRIHVRVEHVQ SRC EEF+LRK KND+LKA AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
A GE ISTKRQP GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sptrnew|AAM10218|AAM10218 Similar to ribosomal protein L21.
Length = 164
Score = 305 bits (780), Expect = 6e-82
Identities = 141/164 (85%), Positives = 153/164 (93%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG +WNVTKRA+GVE+NKQ+ RIIRKRIHVRVEHVQ SRC EEF+LRK KND+LKA AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
A GE ISTKRQP GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sptrnew|AAL24405|AAL24405 Similar to ribosomal protein L21.
Length = 164
Score = 305 bits (780), Expect = 6e-82
Identities = 141/164 (85%), Positives = 153/164 (93%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG +WNVTKRA+GVE+NKQ+ RIIRKRIHVRVEHVQ SRC EEF+LRK KND+LKA AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
A GE ISTKRQP GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sw|Q43291|RL21_ARATH 60S ribosomal protein L21.
Length = 164
Score = 305 bits (780), Expect = 6e-82
Identities = 141/164 (85%), Positives = 153/164 (93%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG +WNVTKRA+GVE+NKQ+ RIIRKRIHVRVEHVQ SRC EEF+LRK KND+LKA AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
A GE ISTKRQP GPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sptr|Q962T7|Q962T7 Ribosomal protein L21.
Length = 159
Score = 179 bits (454), Expect = 4e-44
Identities = 83/158 (52%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
M G R TRDLFAR FR G IPL+TY++ YK+GD VD++ NGAV KGMPHK YHG+
Sbjct: 1 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG V+NVT+ A+G+ +NK+V GRI+ KRI+VR+EH++ S+C ++F R +N++L +AK
Sbjct: 61 TGRVYNVTQHALGIIVNKRVRGRILPKRINVRIEHIKHSKCRQDFLKRVKENERLLKEAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLET-VTPIPYDVV 534
A G++++ KRQP GPKP +V G + PIPY+ V
Sbjct: 121 AAGKIVNLKRQPAGPKPAHIVSGTEKPVLLAPIPYEFV 158
>sw|O82574|RL21_CYAPA 60S ribosomal protein L21.
Length = 161
Score = 176 bits (446), Expect = 3e-43
Identities = 92/158 (58%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MP +G R+RTR LFAR F+ G + L+TYL +KIG+YVDV N AVHKGMP K+YHGR
Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG VWNVTKRAIGVEINK+V RII+KRIHVR++HV+ S C + F R +ND++K DA
Sbjct: 61 TGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAH 120
Query: 424 -ARGEVISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
A+ V STKR PV PK G ++ +G ET IPY+
Sbjct: 121 VAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>sw|Q02753|R21A_YEAST 60S ribosomal protein L21-A.
Length = 160
Score = 167 bits (424), Expect = 1e-40
Identities = 79/157 (50%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
M HG RSRTR +F R FRK G + L+TYL+ YK+GD VD+K NG++ KGMPHKFY G+
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG V+NVTK ++GV INK V R + KR+++RVEH++ S+C +EF R N +A+AK
Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
A+G + KRQP P+ +V EG +T+ P+PY+
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>sw|Q12672|R21B_YEAST 60S ribosomal protein L21-B.
Length = 160
Score = 166 bits (421), Expect = 3e-40
Identities = 78/157 (49%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
M HG RSRTR +F R FRK G + ++TYL+ YK+GD VD+K NG++ KGMPHKFY G+
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG V+NVTK ++GV INK V R + KR+++RVEH++ S+C +EF R N +A+AK
Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
A+G + KRQP P+ +V EG +T+ P+PY+
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>sptr|Q9V9M7|Q9V9M7 Ribosomal protein L21 (RE62581p) (RH06526p).
Length = 159
Score = 166 bits (420), Expect = 4e-40
Identities = 79/160 (49%), Positives = 114/160 (71%), Gaps = 3/160 (1%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
M G R TRD+F+RPFRK G IPL+TY+R +KIGD VD+K +GAV KG+P+K YHG+
Sbjct: 1 MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGK 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG ++NVT+ A+GV +NK+V G+I+ KR++VR+EH+ S+C E+F R +N++L +AK
Sbjct: 61 TGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLE---TVTPIPYDVV 534
+G+ +S KRQP PK V+ LE + PIPY+ +
Sbjct: 121 EKGQWVSLKRQPEQPKKAHFVK--KLEEPIALAPIPYEFI 158
>sw|O42706|R21B_SCHPO 60S ribosomal protein L21-B.
Length = 160
Score = 162 bits (409), Expect = 7e-39
Identities = 78/157 (49%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MP +G+R+RTR F R FR+ G I L+TYL+TYK+GD VD+KVNGAV KGMPHK+YHG+
Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG V+NVT+ ++GV I K V R + KR++VR+EHV+ S+C ++F R N+ + +AK
Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVT--PIPYD 528
A+G+ + +RQP P V E VT P+ YD
Sbjct: 121 AQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>sw|Q9UUC1|R21A_SCHPO 60S ribosomal protein L21-A.
Length = 160
Score = 162 bits (409), Expect = 7e-39
Identities = 78/157 (49%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
MP +G+R+RTR F R FR+ G I L+TYL+TYK+GD VD+KVNGAV KGMPHK+YHG+
Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG V+NVT+ ++GV I K V R + KR++VR+EHV+ S+C ++F R N+ + +AK
Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120
Query: 424 ARGEVISTKRQPVGPKPGFMVEGATLETVT--PIPYD 528
A+G+ + +RQP P V E VT P+ YD
Sbjct: 121 AQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>sptrnew|EAA00465|EAA00465 AgCP9782 (Fragment).
Length = 168
Score = 161 bits (408), Expect = 9e-39
Identities = 85/163 (52%), Positives = 113/163 (69%), Gaps = 5/163 (3%)
Frame = +1
Query: 61 KMPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHG 240
KM G R TRD+F+R FRK G IPL+TY++ YK GDYVD+K +GAVHKGMP+K YHG
Sbjct: 6 KMTNSKGYRRGTRDMFSRGFRKHGTIPLSTYMKIYKSGDYVDIKGHGAVHKGMPYKAYHG 65
Query: 241 RTGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADA 420
+TG V+NV+K A+GV +NK+V G+I+ KRI+VRVEHVQPSRC E+F LR+ K + K A
Sbjct: 66 KTGRVYNVSKHALGVIVNKRVRGKILPKRINVRVEHVQPSRCREDF-LRRVKENVEKRMA 124
Query: 421 ----KARGEVISTKRQPVGPKPGFMVEGATLET-VTPIPYDVV 534
K G +S KR+P P+ +++ + PIPY+ V
Sbjct: 125 LRGKKLPGFKVSLKRKPKQPRQAQVIKNPPKPIFLAPIPYEFV 167
>sw|P46778|RL21_HUMAN 60S ribosomal protein L21.
Length = 159
Score = 160 bits (406), Expect = 2e-38
Identities = 77/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +1
Query: 79 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGSVW 258
G R TR +F+RPFRK G +PL TY+R YK GD VD+K G V KGMPHK YHG+TG V+
Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64
Query: 259 NVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAKARGEV 438
NVT+ A+G+ +NKQV G+I+ KRI+VR+EH++ S+ + F R +NDQ K +AK +G
Sbjct: 65 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124
Query: 439 ISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
+ KRQP P+ V G E + PIPY+
Sbjct: 125 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>sptr|Q9CQM8|Q9CQM8 Rpl21 protein (Ribosomal protein L21).
Length = 160
Score = 160 bits (405), Expect = 2e-38
Identities = 77/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +1
Query: 79 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGSVW 258
G R TR +F+RPFRK G +PL TY+R YK GD VD+K G V KGMPHK YHG+TG V+
Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 65
Query: 259 NVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAKARGEV 438
NVT+ A+G+ +NKQV G+I+ KRI+VR+EH++ S+ + F R +NDQ K +AK +G
Sbjct: 66 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 125
Query: 439 ISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
+ KRQP P+ V G E + PIPY+
Sbjct: 126 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157
>sptr|Q90YU7|Q90YU7 Ribosomal protein L21.
Length = 160
Score = 160 bits (404), Expect = 3e-38
Identities = 75/152 (49%), Positives = 105/152 (69%), Gaps = 2/152 (1%)
Frame = +1
Query: 79 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGSVW 258
G R TR +FARPFRK G +PL+TY+R YK GD VD+K G + KGMPHK YHG+TG ++
Sbjct: 6 GKRRGTRYMFARPFRKHGSVPLSTYMRIYKKGDIVDIKGTGTIQKGMPHKCYHGKTGRIY 65
Query: 259 NVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAKARGEV 438
NVT+ A+G+ +NKQV G+I+ KRI+VR+EHV+ S+ E F R +N++ K +AKA+
Sbjct: 66 NVTQHAVGIIVNKQVKGKILAKRINVRIEHVKHSKSRESFLQRIKENEKRKLEAKAKNSW 125
Query: 439 ISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
+ KRQP P+P V + + + PIPY+
Sbjct: 126 VELKRQPAAPRPAHFVSTKNNMPQLLEPIPYE 157
>sptr|Q861S4|Q861S4 Similar to ribosomal protein L21 (Fragment).
Length = 160
Score = 159 bits (402), Expect = 4e-38
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Frame = +1
Query: 79 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGSVW 258
G R TR +F+RPFRK G +PL TY+R Y+ GD VD+K G V KGMPHK YHG+TG V+
Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 65
Query: 259 NVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAKARGEV 438
NVT+ A+G+ +NKQV G+I+ KRI+VR+EH++ S+ + F R +NDQ K +AK +G
Sbjct: 66 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 125
Query: 439 ISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
+ KRQP P+ V G E + PIPY+
Sbjct: 126 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157
>sptr|Q9SHE5|Q9SHE5 T19E23.15.
Length = 137
Score = 158 bits (399), Expect = 1e-37
Identities = 90/154 (58%), Positives = 101/154 (65%), Gaps = 10/154 (6%)
Frame = +1
Query: 124 KKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGSVWNVTKRAIGVEINKQV 303
KKGYI L+TYL T+K+GDYV+VKVNGA+HK +NKQ+
Sbjct: 10 KKGYILLSTYLITFKVGDYVNVKVNGAIHK-------------------------VNKQI 44
Query: 304 NGRIIRKRIHVRVEHVQPSR----------CTEEFRLRKAKNDQLKADAKARGEVISTKR 453
R IRKRIHVRVEHVQ SR C +EF LRK +ND KA AKA+ E ISTKR
Sbjct: 45 KNRNIRKRIHVRVEHVQQSRTMCLRLQQSRCDDEFSLRKKQNDVFKAAAKAKCETISTKR 104
Query: 454 QPVGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 555
QP GPKP FMVEG TLETVTPIP +VVNDLKGGY
Sbjct: 105 QPKGPKPCFMVEGMTLETVTPIP-NVVNDLKGGY 137
>sptrnew|EAA34996|EAA34996 Hypothetical protein.
Length = 160
Score = 157 bits (396), Expect = 2e-37
Identities = 81/156 (51%), Positives = 107/156 (68%), Gaps = 4/156 (2%)
Frame = +1
Query: 73 GH--GLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRT 246
GH GLR+ TR F+R FR+KG I L+TYL+ YK+GD VD+KVNGAV KGM HK YHG+T
Sbjct: 2 GHAAGLRAGTRYAFSRNFREKGMIRLSTYLKQYKVGDIVDIKVNGAVQKGMAHKVYHGKT 61
Query: 247 GSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAKA 426
G ++NVTK A+G+ I K+V R I KRI+VR+EH+QPSR ++F R +N +LK AKA
Sbjct: 62 GVIYNVTKSAVGIIIYKKVKHRYIEKRINVRIEHIQPSRSRDDFLRRVKQNAELKKQAKA 121
Query: 427 RGEVISTKRQPVGPKPG--FMVEGATLETVTPIPYD 528
G+ + KRQ + P+ V ETV P+ Y+
Sbjct: 122 EGKPVQLKRQALLPREARTISVVDNKPETVAPVAYE 157
>sptr|Q86QS3|Q86QS3 Ribosomal protein L21.
Length = 160
Score = 156 bits (394), Expect = 4e-37
Identities = 82/159 (51%), Positives = 103/159 (64%), Gaps = 2/159 (1%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
M GHG R TR +F+R FR +G I L+TYL YK GD VDVK G V KGMP+K YHGR
Sbjct: 1 MTNGHGYRRGTRYMFSRKFRARGPIHLSTYLHVYKRGDIVDVKGTGTVQKGMPYKAYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAK 423
TG ++NVT A+GV +NK+V R+I KRI++RVEHV+ SR E+F R KND+LK K
Sbjct: 61 TGRIFNVTNHAVGVIVNKRVGNRVIPKRINLRVEHVKHSRSREDFLKRVKKNDELKKKHK 120
Query: 424 ARGEVISTKRQPVGPKPGFMV--EGATLETVTPIPYDVV 534
G KR+P GP+ G MV + V PIPY+ +
Sbjct: 121 ETGVSQVLKREPGGPRAGHMVSTNNNVPQLVEPIPYEFI 159
>sw|P20280|RL21_RAT 60S ribosomal protein L21.
Length = 159
Score = 155 bits (393), Expect = 5e-37
Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 2/152 (1%)
Frame = +1
Query: 79 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGSVW 258
G R TR +F+RPFRK G +PL TY+R YK GD VD+K G V KGMPHK YHG+TG V+
Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64
Query: 259 NVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAKARGEV 438
NVT+ A+G+ +NKQV G+I+ KRI+VR+EH++ S+ + F R +NDQ K +AK +G
Sbjct: 65 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124
Query: 439 ISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
+ QP P+ V G E + PIPY+
Sbjct: 125 VQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 156
>sptrnew|AAH53767|AAH53767 Hypothetical protein.
Length = 160
Score = 155 bits (393), Expect = 5e-37
Identities = 74/152 (48%), Positives = 104/152 (68%), Gaps = 2/152 (1%)
Frame = +1
Query: 79 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGSVW 258
G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G + KGMPHK YHG+TG V+
Sbjct: 6 GKRRGTRYMFSRPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTIQKGMPHKCYHGKTGRVY 65
Query: 259 NVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAKARGEV 438
NVT+ A+G+ +NKQ+ GRI+ KRI+VRVEH++ S+ + F R +N++ K +AK +G
Sbjct: 66 NVTQHAVGIIVNKQLRGRILAKRINVRVEHIRHSKSRDSFLQRVKENERKKKEAKEKGLW 125
Query: 439 ISTKRQPVGPKPGFMVE--GATLETVTPIPYD 528
+ KRQP P+ V G + + PIPY+
Sbjct: 126 VELKRQPAQPREAHFVRTGGVEPQLLEPIPYE 157
>sw|O09167|RL21_MOUSE 60S ribosomal protein L21.
Length = 159
Score = 155 bits (392), Expect = 6e-37
Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 2/152 (1%)
Frame = +1
Query: 79 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGSVW 258
G R TR +F+RPFRK G +PL TY+R YK GD VD+K G V KGMPHK YHG+TG V+
Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64
Query: 259 NVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKADAKARGEV 438
NVT+ A+G+ +NKQV G+I+ KRI+VR+EH++ S+ + F R +NDQ K +AK +G
Sbjct: 65 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124
Query: 439 ISTKRQPVGPKPGFMV--EGATLETVTPIPYD 528
+ KR P+ V G E + PIPY+
Sbjct: 125 VQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 156
>sptrnew|AAP80694|AAP80694 60S ribosome protein L21.
Length = 159
Score = 153 bits (386), Expect = 3e-36
Identities = 76/159 (47%), Positives = 109/159 (68%), Gaps = 2/159 (1%)
Frame = +1
Query: 64 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 243
M +G R+ TRDLF + FRK G +TYL+ +KIG+YVD+ +N + KGMPHKFYHGR
Sbjct: 1 MVRSNGKRANTRDLFKKAFRKSGNEHTSTYLQVFKIGEYVDIHINPTIMKGMPHKFYHGR 60
Query: 244 TGSVWNVTKRAIGVEINKQVNGRIIRKRIHVRVEHVQPSRCTEEFRLRKAKNDQLKA-DA 420
TG V+NV++ A+GVE++K+V RII KR H+R+EHV+ S+C ++F L + K +++A +A
Sbjct: 61 TGRVFNVSRTAVGVEVSKRVRHRIINKRFHIRIEHVRKSQCNKDF-LDRCKLREIEAQEA 119
Query: 421 KARGEVIS-TKRQPVGPKPGFMVEGATLETVTPIPYDVV 534
RGE + KR P P+ +V +E V PIPY+ V
Sbjct: 120 HKRGEKYTVVKRTPALPRDAHLVTAGEMELVEPIPYEFV 158
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 539,736,528
Number of Sequences: 1272877
Number of extensions: 11460332
Number of successful extensions: 36233
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36187
length of database: 406,886,216
effective HSP length: 121
effective length of database: 252,868,099
effective search space used: 39700291543
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)