BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2161072.2.3
         (885 letters)

Database: /db/trembl-ebi/tmp/swall 
           1,165,242 sequences; 374,381,506 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

   sptr|O04869|O04869 Phenylalanine ammonia-lyase (EC 4.3.1.5) (Fra...   186  3e-65
   sptr|Q84VE0|Q84VE0 Phenylalanine ammonia-lyase.                       181  2e-59
   sw|P14717|PAL1_ORYSA Phenylalanine ammonia-lyase (EC 4.3.1.5).        157  3e-56
   sptrnew|AAM91425|AAM91425 AT3g53260/T4D2_190.                         152  8e-49
   sptr|Q8RWP4|Q8RWP4 Phenylalanine ammonia-lyase.                       152  8e-49
   sw|P45724|PAL2_ARATH Phenylalanine ammonia-lyase 2 (EC 4.3.1.5).      152  8e-49
   sptr|Q94F89|Q94F89 Phenylalanine ammonia-lyase 2 (EC 4.3.1.5).        149  5e-48
   sptr|Q94F91|Q94F91 Phenylalanine ammonia-lyase 3 (EC 4.3.1.5) (F...   148  7e-48
   sw|P35513|PAL2_TOBAC Phenylalanine ammonia-lyase (EC 4.3.1.5).        147  8e-48
   sptr|Q9ATN7|Q9ATN7 Phenylalanine ammonia-lyase.                       149  1e-47
   sw|P25872|PAL1_TOBAC Phenylalanine ammonia-lyase (EC 4.3.1.5).        149  1e-47
   sw|P45733|PAL3_TOBAC Phenylalanine ammonia-lyase (EC 4.3.1.5).        147  2e-47
   sptrnew|AAO29949|AAO29949 Hypothetical protein.                       146  2e-47
   sptrnew|AAL85094|AAL85094 Putative phenylalanine ammonia lyase P...   146  2e-47
   sptr|Q94AN1|Q94AN1 Putative phenylalanine ammonia lyase.              146  2e-47
   sw|P35510|PAL1_ARATH Phenylalanine ammonia-lyase 1 (EC 4.3.1.5).      146  2e-47
   sptr|Q8H2A5|Q8H2A5 Phenylalanine ammonia-lyase (Fragment).            153  2e-47
   sptr|Q94C45|Q94C45 Phenylalanine ammonia-lyase 1 (EC 4.3.1.5).        149  4e-47
   sw|Q9M568|PAL1_RUBID Phenylalanine ammonia-lyase 1 (EC 4.3.1.5) ...   151  7e-47
   sw|Q43210|PALY_WHEAT Phenylalanine ammonia-lyase (EC 4.3.1.5).        154  9e-47
   sw|Q42667|PALY_CITLI Phenylalanine ammonia-lyase (EC 4.3.1.5).        144  1e-46
   sptr|Q9AXI5|Q9AXI5 Phenylalanine ammonia-lyase (EC 4.3.1.5).          145  1e-46
   sw|P45730|PALY_POPTR Phenylalanine ammonia-lyase (EC 4.3.1.5).        147  2e-46
   sptr|Q9FT38|Q9FT38 Inducible phenylalanine ammonia-lyase (Fragme...   145  2e-46
   sptr|Q43211|Q43211 Phenylalanine ammonia-lyase (EC 4.3.1.5) (Fra...   152  2e-46
   sw|P35512|PALY_MALDO Phenylalanine ammonia-lyase (EC 4.3.1.5) (F...   149  2e-46
   sw|O64963|PAL1_PRUAV Phenylalanine ammonia-lyase 1 (EC 4.3.1.5).      148  3e-46
   sptr|Q9XFX6|Q9XFX6 Phenylalanine-ammonia lyase (EC 4.3.1.5).          143  4e-46
   sptr|Q84LI2|Q84LI2 Phenylalanine ammonia-lyase.                       144  4e-46
   sptr|Q8H6V5|Q8H6V5 Phenylalanine ammonia-lyase.                       145  6e-46



>sptr|O04869|O04869 Phenylalanine ammonia-lyase (EC 4.3.1.5)
           (Fragment).
          Length = 497

 Score =  186 bits (472), Expect(2) = 3e-65
 Identities = 91/129 (70%), Positives = 106/129 (82%), Gaps = 2/129 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSG--DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLRAVLVDHAL++G  +AE E +VFS+I KFEEELR+ LP+           GTAP+
Sbjct: 369 LMQKLRAVLVDHALTAGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPI 428

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            N I +SRSFPLYRFVR+ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW
Sbjct: 429 PNLIKESRSFPLYRFVREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEW 488

Query: 513 DGKPLPINI 539
           +G+PLPIN+
Sbjct: 489 NGEPLPINV 497



 Score = 85.5 bits (210), Expect(2) = 3e-65
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 317 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 368


>sptr|Q84VE0|Q84VE0 Phenylalanine ammonia-lyase.
          Length = 671

 Score =  181 bits (459), Expect(2) = 2e-59
 Identities = 88/127 (69%), Positives = 104/127 (81%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LM K+RAVLV+HAL++G AE++   SVFS+IT FEEELR  LP+           GTAP+
Sbjct: 544 LMTKIRAVLVEHALANGPAEKDDGSSVFSKITAFEEELREALPREMEAARVAFETGTAPI 603

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI +SRSFPLYRFVR+ELGCV+LTGEKLKSPGEECNKVFL IS+ KL+DPMLECLKEW
Sbjct: 604 TNRIKESRSFPLYRFVREELGCVYLTGEKLKSPGEECNKVFLAISERKLIDPMLECLKEW 663

Query: 513 DGKPLPI 533
           +G+PLPI
Sbjct: 664 NGEPLPI 670



 Score = 70.9 bits (172), Expect(2) = 2e-59
 Identities = 35/52 (67%), Positives = 42/52 (80%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KN VT VAKKVLT  P+G L SARFSEK L++AIDREAV++YA+D  SA+ P
Sbjct: 492 KNCVTTVAKKVLTTGPAGGLHSARFSEKALLTAIDREAVYSYADDPCSANYP 543


>sw|P14717|PAL1_ORYSA Phenylalanine ammonia-lyase (EC 4.3.1.5).
          Length = 701

 Score =  157 bits (398), Expect(2) = 3e-56
 Identities = 84/130 (64%), Positives = 97/130 (74%), Gaps = 4/130 (3%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXX----XXGTA 326
           LMQKLRAVLV+HAL+SGD         R+ + + ++R   P                 TA
Sbjct: 576 LMQKLRAVLVEHALTSGDRRARGL---RVLQ-DHQVRGGAPLCAAPGDRGRPRRRRQRTA 631

Query: 327 PVANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLK 506
           PVANRI +SRSFPLYRFVR+ELGCVFLTGEKLKSPGEECNKVFLGISQGKL+DPML+CLK
Sbjct: 632 PVANRIVESRSFPLYRFVREELGCVFLTGEKLKSPGEECNKVFLGISQGKLIDPMLDCLK 691

Query: 507 EWDGKPLPIN 536
           EW+G+PLPIN
Sbjct: 692 EWNGEPLPIN 701



 Score = 84.0 bits (206), Expect(2) = 3e-56
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KN VTQVAKKVLTMNP+GDLSSARFSEK L++AIDREAVF+YA+D  SA+ P
Sbjct: 524 KNCVTQVAKKVLTMNPTGDLSSARFSEKNLLTAIDREAVFSYADDPCSANYP 575


>sptrnew|AAM91425|AAM91425 AT3g53260/T4D2_190.
          Length = 717

 Score =  152 bits (384), Expect(2) = 8e-49
 Identities = 72/127 (56%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQ+LR V+VDHALS+G+ E+    S+F +I  FEEEL+AVLP+           GTAP+
Sbjct: 590 LMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPI 649

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK+ SPGEE +KVF  + +GKL+DP+++CLKEW
Sbjct: 650 PNRIKECRSYPLYRFVREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEW 709

Query: 513 DGKPLPI 533
           +G P+PI
Sbjct: 710 NGAPIPI 716



 Score = 64.3 bits (155), Expect(2) = 8e-49
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAKKVLT   +G+L  +RF EK+L+  +DRE VFTY +D  SA+ P
Sbjct: 538 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 589


>sptr|Q8RWP4|Q8RWP4 Phenylalanine ammonia-lyase.
          Length = 717

 Score =  152 bits (384), Expect(2) = 8e-49
 Identities = 72/127 (56%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQ+LR V+VDHALS+G+ E+    S+F +I  FEEEL+AVLP+           GTAP+
Sbjct: 590 LMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPI 649

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK+ SPGEE +KVF  + +GKL+DP+++CLKEW
Sbjct: 650 PNRIKECRSYPLYRFVREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEW 709

Query: 513 DGKPLPI 533
           +G P+PI
Sbjct: 710 NGAPIPI 716



 Score = 64.3 bits (155), Expect(2) = 8e-49
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAKKVLT   +G+L  +RF EK+L+  +DRE VFTY +D  SA+ P
Sbjct: 538 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 589


>sw|P45724|PAL2_ARATH Phenylalanine ammonia-lyase 2 (EC 4.3.1.5).
          Length = 717

 Score =  152 bits (384), Expect(2) = 8e-49
 Identities = 72/127 (56%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQ+LR V+VDHALS+G+ E+    S+F +I  FEEEL+AVLP+           GTAP+
Sbjct: 590 LMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGTAPI 649

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK+ SPGEE +KVF  + +GKL+DP+++CLKEW
Sbjct: 650 PNRIKECRSYPLYRFVREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKLIDPLMDCLKEW 709

Query: 513 DGKPLPI 533
           +G P+PI
Sbjct: 710 NGAPIPI 716



 Score = 64.3 bits (155), Expect(2) = 8e-49
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAKKVLT   +G+L  +RF EK+L+  +DRE VFTY +D  SA+ P
Sbjct: 538 KNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYP 589


>sptr|Q94F89|Q94F89 Phenylalanine ammonia-lyase 2 (EC 4.3.1.5).
          Length = 712

 Score =  149 bits (375), Expect(2) = 5e-48
 Identities = 70/127 (55%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREPS--VFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHAL++G++E+  S  +F +I  FEEEL+A+LP+           G   +
Sbjct: 585 LMQKLRQVLVDHALANGESEKNASTSIFQKIRAFEEELKALLPKEVESAREAYENGNPAI 644

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
           AN+I + RS+PLY+FVR+E+G   LTGEK++SPGEE +KVF  + QGK++DPML+CLKEW
Sbjct: 645 ANKIKECRSYPLYKFVREEIGTGLLTGEKIRSPGEEFDKVFTAMCQGKIIDPMLDCLKEW 704

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 705 NGAPLPI 711



 Score = 65.1 bits (157), Expect(2) = 5e-48
 Identities = 29/52 (55%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK++LT   SG+L  +RF EK+L+  +DRE VF+Y +DA SA+ P
Sbjct: 533 KNTVSQVAKRILTTGASGELHPSRFCEKDLLKVVDREQVFSYVDDACSATYP 584


>sptr|Q94F91|Q94F91 Phenylalanine ammonia-lyase 3 (EC 4.3.1.5)
           (Fragment).
          Length = 315

 Score =  148 bits (374), Expect(2) = 7e-48
 Identities = 70/127 (55%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREPS--VFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHAL++G++E+  S  +F +I  FEEEL+A+LP+           G   +
Sbjct: 188 LMQKLRQVLVDHALANGESEKNASTSIFQKIRAFEEELKALLPKEVESAREAYENGNPAI 247

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
           AN+I + RS+PLY+FVR+E+G   LTGEK++SPGEE +KVF  + QGK++DPML+CLKEW
Sbjct: 248 ANKIKECRSYPLYKFVREEIGTGLLTGEKVRSPGEEFDKVFTAMCQGKIIDPMLDCLKEW 307

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 308 NGAPLPI 314



 Score = 65.1 bits (157), Expect(2) = 7e-48
 Identities = 29/52 (55%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK++LT   SG+L  +RF EK+L+  +DRE VF+Y +DA SA+ P
Sbjct: 136 KNTVSQVAKRILTTGASGELHPSRFCEKDLLKVVDREQVFSYVDDACSATYP 187


>sw|P35513|PAL2_TOBAC Phenylalanine ammonia-lyase (EC 4.3.1.5).
          Length = 712

 Score =  147 bits (372), Expect(2) = 8e-48
 Identities = 71/127 (55%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHAL +G+ E+    S+F +I  FE+EL+AVLP+           G   +
Sbjct: 585 LMQKLRQVLVDHALQNGENEKNANSSIFQKILAFEDELKAVLPKEVESARAALESGNPAI 644

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
           ANRI + RS+PLYRFVR ELG   LTGEK++SPGEEC+KVF  +  G+++D +LECLKEW
Sbjct: 645 ANRIKECRSYPLYRFVRGELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEW 704

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 705 NGAPLPI 711



 Score = 65.5 bits (158), Expect(2) = 8e-48
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+ LTM  +G+L  +RF EK+L+  +DRE VF YA+DA SA+ P
Sbjct: 533 KNTVSQVAKRTLTMGTNGELHPSRFCEKDLLRVVDREYVFAYADDACSANYP 584


>sptr|Q9ATN7|Q9ATN7 Phenylalanine ammonia-lyase.
          Length = 716

 Score =  149 bits (377), Expect(2) = 1e-47
 Identities = 72/127 (56%), Positives = 93/127 (73%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAERE--PSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHAL +G++E+    S+F +I  FEEEL+A+LP+           G+  V
Sbjct: 589 LMQKLRQVLVDHALKNGESEKNVSTSIFHKIEAFEEELKALLPKEVESARIALESGSPAV 648

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
           ANRI + RSFPLY+F+R+ELG  FLTGEK  SPGEEC KVF  +S G ++DP+LECL+ W
Sbjct: 649 ANRIEECRSFPLYKFIREELGTGFLTGEKAVSPGEECEKVFAALSNGLIIDPLLECLQGW 708

Query: 513 DGKPLPI 533
           +G+PLPI
Sbjct: 709 NGEPLPI 715



 Score = 62.8 bits (151), Expect(2) = 1e-47
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+ LTM  +G+L  +RF EKELI  +DRE VFTY +D   A+ P
Sbjct: 537 KNTVSQVAKRTLTMGVNGELHPSRFCEKELIRVVDREYVFTYIDDPCLATYP 588


>sw|P25872|PAL1_TOBAC Phenylalanine ammonia-lyase (EC 4.3.1.5).
          Length = 715

 Score =  149 bits (377), Expect(2) = 1e-47
 Identities = 70/127 (55%), Positives = 93/127 (73%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAERE--PSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHA+++G++E+    S+F +I  FE+EL+AVLP+           G   +
Sbjct: 588 LMQKLRQVLVDHAMNNGESEKNVNSSIFQKIGAFEDELKAVLPKEVESARAALESGNPAI 647

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK++SPGEEC+KVF  +  G+++DPMLECLK W
Sbjct: 648 PNRITECRSYPLYRFVRKELGTELLTGEKVRSPGEECDKVFTAMCNGQIIDPMLECLKSW 707

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 708 NGAPLPI 714



 Score = 62.8 bits (151), Expect(2) = 1e-47
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+ LTM  +G+L  ARF EKEL+  +DRE +F YA+D  S + P
Sbjct: 536 KNTVSQVAKRTLTMGANGELHPARFCEKELLRIVDREYLFAYADDPCSCNYP 587


>sw|P45733|PAL3_TOBAC Phenylalanine ammonia-lyase (EC 4.3.1.5).
          Length = 712

 Score =  147 bits (370), Expect(2) = 2e-47
 Identities = 71/127 (55%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHAL +G+ E+    S+F +I  FE EL+AVLP+           G   +
Sbjct: 585 LMQKLRQVLVDHALENGENEKNANSSIFQKILAFEGELKAVLPKEVESARISLENGNPAI 644

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
           ANRI + RS+PLYRFVR+ELG   LTGEK++SPGEEC+KVF  +  G+++D +LECLKEW
Sbjct: 645 ANRIKECRSYPLYRFVREELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEW 704

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 705 NGAPLPI 711



 Score = 65.1 bits (157), Expect(2) = 2e-47
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+ LTM  +G+L  +RF EK+L+  +DRE VF YA+DA SA+ P
Sbjct: 533 KNTVSQVAKRTLTMGANGELHPSRFCEKDLLRVVDREYVFRYADDACSANYP 584


>sptrnew|AAO29949|AAO29949 Hypothetical protein.
          Length = 725

 Score =  146 bits (369), Expect(2) = 2e-47
 Identities = 70/127 (55%), Positives = 93/127 (73%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           L+QKLR V+VDHAL +G++E+    S+F +I  FEEEL+AVLP+           GT+ +
Sbjct: 598 LIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAI 657

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK+ SPGEE +KVF  I +GK++DPM+ECL EW
Sbjct: 658 PNRIKECRSYPLYRFVREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEW 717

Query: 513 DGKPLPI 533
           +G P+PI
Sbjct: 718 NGAPIPI 724



 Score = 65.1 bits (157), Expect(2) = 2e-47
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAKKVLT   +G+L  +RF EK+L+  +DRE V+TYA+D  SA+ P
Sbjct: 546 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 597


>sptrnew|AAL85094|AAL85094 Putative phenylalanine ammonia lyase
           PAL1.
          Length = 725

 Score =  146 bits (369), Expect(2) = 2e-47
 Identities = 70/127 (55%), Positives = 93/127 (73%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           L+QKLR V+VDHAL +G++E+    S+F +I  FEEEL+AVLP+           GT+ +
Sbjct: 598 LIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAI 657

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK+ SPGEE +KVF  I +GK++DPM+ECL EW
Sbjct: 658 PNRIKECRSYPLYRFVREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEW 717

Query: 513 DGKPLPI 533
           +G P+PI
Sbjct: 718 NGAPIPI 724



 Score = 65.1 bits (157), Expect(2) = 2e-47
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAKKVLT   +G+L  +RF EK+L+  +DRE V+TYA+D  SA+ P
Sbjct: 546 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 597


>sptr|Q94AN1|Q94AN1 Putative phenylalanine ammonia lyase.
          Length = 725

 Score =  146 bits (369), Expect(2) = 2e-47
 Identities = 70/127 (55%), Positives = 93/127 (73%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           L+QKLR V+VDHAL +G++E+    S+F +I  FEEEL+AVLP+           GT+ +
Sbjct: 598 LIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAI 657

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK+ SPGEE +KVF  I +GK++DPM+ECL EW
Sbjct: 658 PNRIKECRSYPLYRFVREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEW 717

Query: 513 DGKPLPI 533
           +G P+PI
Sbjct: 718 NGAPIPI 724



 Score = 65.1 bits (157), Expect(2) = 2e-47
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAKKVLT   +G+L  +RF EK+L+  +DRE V+TYA+D  SA+ P
Sbjct: 546 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 597


>sw|P35510|PAL1_ARATH Phenylalanine ammonia-lyase 1 (EC 4.3.1.5).
          Length = 725

 Score =  146 bits (369), Expect(2) = 2e-47
 Identities = 70/127 (55%), Positives = 93/127 (73%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           L+QKLR V+VDHAL +G++E+    S+F +I  FEEEL+AVLP+           GT+ +
Sbjct: 598 LIQKLRQVIVDHALVNGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAI 657

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK+ SPGEE +KVF  I +GK++DPM+ECL EW
Sbjct: 658 PNRIKECRSYPLYRFVREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEW 717

Query: 513 DGKPLPI 533
           +G P+PI
Sbjct: 718 NGAPIPI 724



 Score = 65.1 bits (157), Expect(2) = 2e-47
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAKKVLT   +G+L  +RF EK+L+  +DRE V+TYA+D  SA+ P
Sbjct: 546 KNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 597


>sptr|Q8H2A5|Q8H2A5 Phenylalanine ammonia-lyase (Fragment).
          Length = 295

 Score =  153 bits (386), Expect(2) = 2e-47
 Identities = 74/127 (58%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLV+ AL +G+ E++P  S+F +I  FEEEL+A LP+           GT+ +
Sbjct: 168 LMQKLRQVLVEQALGNGEKEKDPNNSIFQKIAAFEEELKAQLPKEVEAARVAFENGTSAI 227

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
           ANRI + RS+PLYRFVR+ELG  +LTGEK++SPGEE NKVF  I +GK +DPMLECLKEW
Sbjct: 228 ANRIQECRSYPLYRFVREELGAGYLTGEKVRSPGEEFNKVFNAICKGKAIDPMLECLKEW 287

Query: 513 DGKPLPI 533
           +G PLP+
Sbjct: 288 NGAPLPL 294



 Score = 58.5 bits (140), Expect(2) = 2e-47
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KN V Q AK+VLT+   G+L  ARF EK+LI  +DR+ VF YA+D  S++ P
Sbjct: 116 KNAVGQAAKRVLTVGAGGELHPARFCEKDLIKVVDRDHVFAYADDPCSSTYP 167


>sptr|Q94C45|Q94C45 Phenylalanine ammonia-lyase 1 (EC 4.3.1.5).
          Length = 710

 Score =  149 bits (375), Expect(2) = 4e-47
 Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREPS--VFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHA+ +G+ E+  S  +F +I  FEEEL+ +LP+           G   +
Sbjct: 583 LMQKLRQVLVDHAMMNGEKEKNSSTSIFQKIGAFEEELKTLLPKEVESARTEYENGNPAI 642

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
           +N+I + RS+PLY+FVR+ELGC  LTGEK++SPGEE +KVF  I  GKL+DPMLECLKEW
Sbjct: 643 SNKIKECRSYPLYKFVREELGCSLLTGEKIRSPGEEFDKVFSAICAGKLIDPMLECLKEW 702

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 703 NGAPLPI 709



 Score = 62.0 bits (149), Expect(2) = 4e-47
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+VLTM  +G+L  +RF EK+L+  +DRE V+ Y +D  SA+ P
Sbjct: 531 KNTVSQVAKRVLTMGINGELHPSRFCEKDLLKVVDREYVYAYVDDPCSATYP 582


>sw|Q9M568|PAL1_RUBID Phenylalanine ammonia-lyase 1 (EC 4.3.1.5)
           (RiPAL1).
          Length = 710

 Score =  151 bits (381), Expect(2) = 7e-47
 Identities = 75/128 (58%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLRA LV+HAL +G+ ER    S+F +I  FEEEL+ +LP+           G + +
Sbjct: 583 LMQKLRAELVEHALKNGERERSANTSIFHKIAAFEEELKTILPKEVDNARIEIENGKSEI 642

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG   LTGEK+KSPGEEC KVF  I  GKLVDP+LECLKEW
Sbjct: 643 PNRIKECRSYPLYRFVREELGTSLLTGEKIKSPGEECYKVFNAICAGKLVDPLLECLKEW 702

Query: 513 DGKPLPIN 536
           +G PLPI+
Sbjct: 703 NGAPLPIS 710



 Score = 58.9 bits (141), Expect(2) = 7e-47
 Identities = 25/52 (48%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           K TV+ VAK+ LT++P+G+L  +RFSEK+L++ +DRE +F+Y +D   A+ P
Sbjct: 531 KTTVSNVAKRTLTVSPNGELHPSRFSEKDLLTVVDREYLFSYIDDPCLATYP 582


>sw|Q43210|PALY_WHEAT Phenylalanine ammonia-lyase (EC 4.3.1.5).
          Length = 700

 Score =  154 bits (389), Expect(2) = 9e-47
 Identities = 75/127 (59%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAER--EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQK+RAVLV+HAL++G+AE   E SVF+++  FE+ELRAVLP+           GTA  
Sbjct: 573 LMQKMRAVLVEHALANGEAEAHVETSVFAKLAMFEQELRAVLPKEVEAARSAVENGTAAQ 632

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRIA+ RS+PLYRFVR+ELG  +LTGEK +SPGEE +KVF+ ++QGK +D +LECLKEW
Sbjct: 633 QNRIAECRSYPLYRFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEW 692

Query: 513 DGKPLPI 533
           +G+PLP+
Sbjct: 693 NGEPLPL 699



 Score = 55.5 bits (132), Expect(2) = 9e-47
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           K+ V  VA+K L+ + +G L +ARF EK+L+  IDREAVF YA+D  SA+ P
Sbjct: 521 KSCVKTVARKTLSTDNNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYP 572


>sw|Q42667|PALY_CITLI Phenylalanine ammonia-lyase (EC 4.3.1.5).
          Length = 722

 Score =  144 bits (364), Expect(2) = 1e-46
 Identities = 69/127 (54%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHAL +GD E+    S+F +I  FE+EL+ +LP+           G A +
Sbjct: 593 LMQKLRQVLVDHALDNGDREKNSTTSIFQKIGAFEDELKTLLPKEVEIARTELESGNAAI 652

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLY+ VR+++G   LTGEK++SPGEE +KVF  + +GKL+DPMLECLKEW
Sbjct: 653 PNRIKECRSYPLYKIVREDIGTSLLTGEKVRSPGEEFDKVFTAMCEGKLIDPMLECLKEW 712

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 713 NGAPLPI 719



 Score = 64.7 bits (156), Expect(2) = 1e-46
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+VLTM  +G+L  +RF EK+LI  +DRE VF Y +D  SAS P
Sbjct: 541 KNTVSQVAKRVLTMGVNGELHPSRFCEKDLIKVVDREYVFAYIDDPCSASSP 592


>sptr|Q9AXI5|Q9AXI5 Phenylalanine ammonia-lyase (EC 4.3.1.5).
          Length = 711

 Score =  145 bits (365), Expect(2) = 1e-46
 Identities = 67/127 (52%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREP--SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR  LVDHAL +G++E+    S+F ++  FE+EL+AVLP+           G   +
Sbjct: 584 LMQKLRQALVDHALQNGESEKNTGTSIFLKVAAFEDELKAVLPKEVEAARIAVESGNPAI 643

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLY+FVR+ LG   LTGEK++SPGEEC+KVF  + +G ++DP+LECLK W
Sbjct: 644 PNRIKECRSYPLYKFVREGLGTELLTGEKVRSPGEECDKVFTAMCEGSIIDPLLECLKSW 703

Query: 513 DGKPLPI 533
           DG PLPI
Sbjct: 704 DGAPLPI 710



 Score = 64.3 bits (155), Expect(2) = 1e-46
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KN VTQVAK+ LTM  +G+L  ARF EK+L+  +DRE VF YA+D  SA+ P
Sbjct: 532 KNAVTQVAKRTLTMGANGELHPARFCEKDLLRVVDREYVFAYADDPCSANYP 583


>sw|P45730|PALY_POPTR Phenylalanine ammonia-lyase (EC 4.3.1.5).
          Length = 715

 Score =  147 bits (370), Expect(2) = 2e-46
 Identities = 71/127 (55%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAERE--PSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR V VDHAL +G+ E+    SVF +I  FEEEL+A+LP+           G + +
Sbjct: 588 LMQKLRQVFVDHALENGENEKNFSTSVFQKIEAFEEELKALLPKEVESARAAYDSGNSAI 647

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            N+I + RS+PLY+FVR+ELG V LTGEK++SPGEE +KVF  + QGK++DPMLECL EW
Sbjct: 648 DNKIKECRSYPLYKFVREELGTVLLTGEKVQSPGEEFDKVFTAMCQGKIIDPMLECLGEW 707

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 708 NGSPLPI 714



 Score = 61.6 bits (148), Expect(2) = 2e-46
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QV+K+VLT   +G+L  +RF EKEL+  +DRE VF Y +D  SA+ P
Sbjct: 536 KNTVSQVSKRVLTTGANGELHPSRFCEKELLKVVDREYVFAYVDDPCSATYP 587


>sptr|Q9FT38|Q9FT38 Inducible phenylalanine ammonia-lyase
           (Fragment).
          Length = 544

 Score =  145 bits (367), Expect(2) = 2e-46
 Identities = 69/127 (54%), Positives = 94/127 (74%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAER--EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLRAVLV+HAL++GD ER  E S+F+++ +FE+ +RAVLP+           GT   
Sbjct: 417 LMQKLRAVLVEHALANGDGERALETSIFAKVAEFEQNIRAVLPKEVEAARASVENGTPLA 476

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI D RS+PLY+FVR+  G  +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW
Sbjct: 477 PNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEW 536

Query: 513 DGKPLPI 533
           +G+PLP+
Sbjct: 537 NGEPLPL 543



 Score = 62.8 bits (151), Expect(2) = 2e-46
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           +N V QVAKK L+MN  G L  ARF EK+L++AIDREAVF YA+D  S + P
Sbjct: 365 RNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 416


>sptr|Q43211|Q43211 Phenylalanine ammonia-lyase (EC 4.3.1.5)
           (Fragment).
          Length = 339

 Score =  152 bits (385), Expect(2) = 2e-46
 Identities = 75/127 (59%), Positives = 98/127 (77%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAER--EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQK+RAVLV+HAL++G+AER  E SVF+++  FE+ELRAVLP+           GTA  
Sbjct: 212 LMQKMRAVLVEHALANGEAERDVETSVFAKLATFEQELRAVLPKEVEAARSAVENGTAAQ 271

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYRFVR+ELG  +LTGEK  SPGEE +KVF+ ++QGK +D +LECLKEW
Sbjct: 272 QNRIDECRSYPLYRFVRKELGTEYLTGEKTGSPGEEVDKVFVAMNQGKHIDALLECLKEW 331

Query: 513 DGKPLPI 533
           +G+PLP+
Sbjct: 332 NGEPLPL 338



 Score = 55.8 bits (133), Expect(2) = 2e-46
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           K+ V  VA+K L+ + +G L +ARF EK+L+  IDREAVF YA+D  SA+ P
Sbjct: 160 KSCVKTVARKTLSTDTNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYP 211


>sw|P35512|PALY_MALDO Phenylalanine ammonia-lyase (EC 4.3.1.5)
           (Fragment).
          Length = 235

 Score =  149 bits (376), Expect(2) = 2e-46
 Identities = 71/127 (55%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREPS--VFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VL++HAL++G++E+  S  +F +I  FEEEL+A+LP+           G A V
Sbjct: 108 LMQKLREVLIEHALTNGESEKNASTSIFQKIGAFEEELKALLPKEVESARSAIEGGNAAV 167

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRIA+ RS+PLY+FVR+ELG  +LTGEK++SPGEEC+KVF  I QGK++DP+L CL+ W
Sbjct: 168 PNRIAECRSYPLYKFVREELGGEYLTGEKVRSPGEECDKVFQAICQGKIIDPILGCLEGW 227

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 228 NGAPLPI 234



 Score = 59.3 bits (142), Expect(2) = 2e-46
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+ LT   +G+L  +RF EK+L+  +DRE VF Y +D  SA+ P
Sbjct: 56  KNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYP 107


>sw|O64963|PAL1_PRUAV Phenylalanine ammonia-lyase 1 (EC 4.3.1.5).
          Length = 717

 Score =  148 bits (374), Expect(2) = 3e-46
 Identities = 69/127 (54%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREPS--VFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLV+HAL++G+ E+  S  +F +I  FEEEL+ +LP+           G+A V
Sbjct: 590 LMQKLRQVLVEHALTNGENEKNASTSIFQKIVAFEEELKVLLPKEVDSARAALDSGSAGV 649

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLY+FVR+ELG  +LTGEK++SPGEEC+KVF  I +GK++DP+L+CL+ W
Sbjct: 650 PNRITECRSYPLYKFVREELGAEYLTGEKVRSPGEECDKVFTAICEGKIIDPILDCLEGW 709

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 710 NGAPLPI 716



 Score = 59.3 bits (142), Expect(2) = 3e-46
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+ LT   +G+L  +RF EK+L+  +DRE VF Y +D  SA+ P
Sbjct: 538 KNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYP 589


>sptr|Q9XFX6|Q9XFX6 Phenylalanine-ammonia lyase (EC 4.3.1.5).
          Length = 718

 Score =  143 bits (360), Expect(2) = 4e-46
 Identities = 70/127 (55%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAER--EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLV+HAL++G+ E+    S+F +I  FEEEL+ VLP+           G+  +
Sbjct: 591 LMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTI 650

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLYR VR+ LG  FLTGEK+ SPGEE +KVF  + QGK++DPMLECL+EW
Sbjct: 651 PNRIKECRSYPLYRLVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREW 710

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 711 NGAPLPI 717



 Score = 64.3 bits (155), Expect(2) = 4e-46
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAKKVLT+  SG+L  +RF EK+L+ A DRE VF Y +D  SA+ P
Sbjct: 539 KNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYP 590


>sptr|Q84LI2|Q84LI2 Phenylalanine ammonia-lyase.
          Length = 703

 Score =  144 bits (362), Expect(2) = 4e-46
 Identities = 72/127 (56%), Positives = 92/127 (72%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAER--EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLRAVLV+HAL++GD E+    S+F +I+ FE EL+A LP+           G+  +
Sbjct: 577 LMQKLRAVLVEHALNNGDKEKTSSTSIFQKISSFEAELKAALPKEVEAARAAFENGSPAI 636

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI D RS+PLYRFV+Q +G  FLTGEK+ SPGEE +KVF  I +GK +DPML+CLKEW
Sbjct: 637 ENRIKDCRSYPLYRFVKQ-VGAGFLTGEKIVSPGEELDKVFNAICEGKAIDPMLDCLKEW 695

Query: 513 DGKPLPI 533
           +G PLPI
Sbjct: 696 NGAPLPI 702



 Score = 63.5 bits (153), Expect(2) = 4e-46
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+ LTM  +G+L  +RF EK+LI  IDRE VF YA+D  S++ P
Sbjct: 525 KNTVSQVAKRTLTMGVNGELHPSRFCEKDLIKVIDREYVFAYADDPCSSTYP 576


>sptr|Q8H6V5|Q8H6V5 Phenylalanine ammonia-lyase.
          Length = 711

 Score =  145 bits (365), Expect(2) = 6e-46
 Identities = 71/127 (55%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 LMQKLRAVLVDHALSSGDAEREPS--VFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
           LMQKLR VLVDHAL +G+ E   S  +F +I  FE+EL+A+LP+           G   +
Sbjct: 584 LMQKLRQVLVDHALMNGEKEHNSSTSIFQKIGVFEDELKALLPKEVESARLELENGNPAI 643

Query: 333 ANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEW 512
            NRI + RS+PLY+FVR+ELG + LTGEK+ SPGEE +KVF  I  GKL+DPMLECLKEW
Sbjct: 644 PNRITECRSYPLYKFVREELGTILLTGEKVGSPGEEFDKVFTAICAGKLIDPMLECLKEW 703

Query: 513 DGKPLPI 533
           +G PLP+
Sbjct: 704 NGAPLPL 710



 Score = 62.0 bits (149), Expect(2) = 6e-46
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
           KNTV+QVAK+VLTM  +G+L  +R  EK+L+  +DRE VFTY +D  SA+ P
Sbjct: 532 KNTVSQVAKRVLTMGFNGELHPSRICEKDLLKVVDREHVFTYIDDPCSATYP 583


  Database: /db/trembl-ebi/tmp/swall
    Posted date:  Jul 11, 2003  8:27 PM
  Number of letters in database: 374,381,506
  Number of sequences in database:  1,165,242
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 433,640,265
Number of Sequences: 1165242
Number of extensions: 8403237
Number of successful extensions: 28999
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28816
length of database: 374,381,506
effective HSP length: 121
effective length of database: 233,387,224
effective search space used: 40375989752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)