BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738931.2.11
(609 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sw|Q9M573|RL31_PERFR 60S ribosomal protein L31. 178 4e-44
sw|P46290|RL31_NICGU 60S ribosomal protein L31. 172 4e-42
sptr|Q9SLL7|Q9SLL7 60S ribosomal protein L31 (At2g19740/F6F22.23). 170 1e-41
sptr|Q8LEJ0|Q8LEJ0 60S ribosomal protein L31. 169 3e-41
sptrnew|AAM70530|AAM70530 AT5g56710/MIK19_16. 168 4e-41
sptrnew|AAK91410|AAK91410 AT5g56710/MIK19_16. 168 4e-41
sw|P51420|R312_ARATH 60S ribosomal protein L31-2. 168 4e-41
sw|Q9MAV7|RL31_PANGI 60S ribosomal protein L31. 168 5e-41
sw|O65071|RL31_PICMA 60S ribosomal protein L31. 167 9e-41
sptrnew|AAM62461|AAM62461 Putative ribosomal protein. 167 9e-41
sptrnew|AAO64776|AAO64776 At4g26230. 167 9e-41
sw|Q9STR1|R311_ARATH 60S ribosomal protein L31-1. 167 9e-41
sw|Q9XGL4|RL31_CYAPA 60S ribosomal protein L31. 129 4e-29
sptr|Q9XFT6|Q9XFT6 60S ribosomal protein L31. 124 9e-28
sw|P45841|RL31_CHLRE 60S ribosomal protein L31. 124 9e-28
sptr|Q9GP16|Q9GP16 Ribosomal protein L31. 122 3e-27
sptr|Q90YT7|Q90YT7 Ribosomal protein L31. 119 2e-26
sw|Q9IA76|RL31_PAROL 60S ribosomal protein L31. 119 4e-26
sptrnew|EAA36011|EAA36011 Hypothetical protein ( (AJ296278) puta... 118 6e-26
sptrnew|AAH55720|AAH55720 Ribosomal protein L31. 116 2e-25
sptrnew|AAH50113|AAH50113 Similar to ribosomal protein L31. 116 2e-25
sw|P12947|RL31_HUMAN 60S ribosomal protein L31. 116 2e-25
sptrnew|CAA48925|CAA48925 Ribosomal protein L31 (Fragment). 116 2e-25
sptr|Q9CY93|Q9CY93 ERO1-like. 113 2e-24
sw|Q9V597|RL31_DROME 60S ribosomal protein L31. 112 3e-24
sptr|Q9HDQ7|Q9HDQ7 Putative 60s ribosomal protein. 111 8e-24
sw|O18602|RL31_DROVI 60S ribosomal protein L31. 106 2e-22
sw|P04649|RL31_YEAST 60S ribosomal protein L31 (L34) (YL28). 104 9e-22
sptrnew|EAA00150|EAA00150 AgCP9995 (Fragment). 103 2e-21
sw|Q9GN74|RL31_AEDAE 60S ribosomal protein L31. 102 5e-21
>sw|Q9M573|RL31_PERFR 60S ribosomal protein L31.
Length = 121
Score = 178 bits (452), Expect = 4e-44
Identities = 89/118 (75%), Positives = 95/118 (80%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
KG RKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIRKFAQKAMGTTDVR+DVKLNK
Sbjct: 4 KGSKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK 63
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD 424
HIWS GI ND+EDAKEELYSLVTVAEIP GLKGLGT+V+DE +
Sbjct: 64 HIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121
>sw|P46290|RL31_NICGU 60S ribosomal protein L31.
Length = 120
Score = 172 bits (435), Expect = 4e-42
Identities = 85/113 (75%), Positives = 92/113 (81%)
Frame = +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLHKRLH CTFKKKAP AIKEIRKFAQKAMGT DVR+DVKLNK IWS
Sbjct: 8 RKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSR 67
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD 424
GI ND+EDAKEELYSLVTVAEIPA+GLKGLGTK++++ D
Sbjct: 68 GIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120
>sptr|Q9SLL7|Q9SLL7 60S ribosomal protein L31 (At2g19740/F6F22.23).
Length = 119
Score = 170 bits (430), Expect = 1e-41
Identities = 87/122 (71%), Positives = 95/122 (77%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M +GKG RKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIRKFA KAMGT DVR+DV
Sbjct: 1 MEKGKG---RKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWS GI ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E
Sbjct: 58 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEE 117
Query: 419 TD 424
+
Sbjct: 118 EE 119
>sptr|Q8LEJ0|Q8LEJ0 60S ribosomal protein L31.
Length = 119
Score = 169 bits (427), Expect = 3e-41
Identities = 87/122 (71%), Positives = 95/122 (77%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
MS+ KG RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVRIDV
Sbjct: 1 MSEKKG---RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRIDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWS GI ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E
Sbjct: 58 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEE 117
Query: 419 TD 424
D
Sbjct: 118 ED 119
>sptrnew|AAM70530|AAM70530 AT5g56710/MIK19_16.
Length = 119
Score = 168 bits (426), Expect = 4e-41
Identities = 86/122 (70%), Positives = 95/122 (77%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
MS+ KG RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DV
Sbjct: 1 MSEKKG---RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWS GI ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E
Sbjct: 58 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEE 117
Query: 419 TD 424
D
Sbjct: 118 ED 119
>sptrnew|AAK91410|AAK91410 AT5g56710/MIK19_16.
Length = 119
Score = 168 bits (426), Expect = 4e-41
Identities = 86/122 (70%), Positives = 95/122 (77%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
MS+ KG RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DV
Sbjct: 1 MSEKKG---RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWS GI ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E
Sbjct: 58 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEE 117
Query: 419 TD 424
D
Sbjct: 118 ED 119
>sw|P51420|R312_ARATH 60S ribosomal protein L31-2.
Length = 119
Score = 168 bits (426), Expect = 4e-41
Identities = 86/122 (70%), Positives = 95/122 (77%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
MS+ KG RKEEV+TREYTINLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+DV
Sbjct: 1 MSEKKG---RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWS GI ND+EDAKEE +SLVTVAEIPAEGL GLGTKV++E
Sbjct: 58 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEE 117
Query: 419 TD 424
D
Sbjct: 118 ED 119
>sw|Q9MAV7|RL31_PANGI 60S ribosomal protein L31.
Length = 121
Score = 168 bits (425), Expect = 5e-41
Identities = 84/113 (74%), Positives = 91/113 (80%)
Frame = +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVR+DVKLNK IWS
Sbjct: 8 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSR 67
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD 424
GI ND+EDAKEELYSLVTVA+IPA LKGLG ++++E D
Sbjct: 68 GIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120
>sw|O65071|RL31_PICMA 60S ribosomal protein L31.
Length = 120
Score = 167 bits (423), Expect = 9e-41
Identities = 80/116 (68%), Positives = 91/116 (78%)
Frame = +2
Query: 77 GASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHI 256
G SR+ EV TREYTINLH+RLHGCTFKK AP A+KEIRKFAQKAMGTTDVR+DVKLNK +
Sbjct: 5 GKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAV 64
Query: 257 WSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD 424
WS GI NDEEDAK+ELYS+VTVAE+P EGL GLGTK+++E D
Sbjct: 65 WSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120
>sptrnew|AAM62461|AAM62461 Putative ribosomal protein.
Length = 119
Score = 167 bits (423), Expect = 9e-41
Identities = 85/122 (69%), Positives = 94/122 (77%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
MS+ KG RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DV
Sbjct: 1 MSEKKG---RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWS GI ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E
Sbjct: 58 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEE 117
Query: 419 TD 424
D
Sbjct: 118 ED 119
>sptrnew|AAO64776|AAO64776 At4g26230.
Length = 119
Score = 167 bits (423), Expect = 9e-41
Identities = 85/122 (69%), Positives = 94/122 (77%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
MS+ KG RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DV
Sbjct: 1 MSEKKG---RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWS GI ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E
Sbjct: 58 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEE 117
Query: 419 TD 424
D
Sbjct: 118 ED 119
>sw|Q9STR1|R311_ARATH 60S ribosomal protein L31-1.
Length = 119
Score = 167 bits (423), Expect = 9e-41
Identities = 85/122 (69%), Positives = 94/122 (77%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
MS+ KG RKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+DV
Sbjct: 1 MSEKKG---RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWS GI ND+EDAKEE +SLVTVAEIPAEGL GLGTK+++E
Sbjct: 58 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEE 117
Query: 419 TD 424
D
Sbjct: 118 ED 119
>sw|Q9XGL4|RL31_CYAPA 60S ribosomal protein L31.
Length = 119
Score = 129 bits (323), Expect = 4e-29
Identities = 65/119 (54%), Positives = 80/119 (67%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M + + SR E+VTREYTINLHKRLHG FKK+AP A+KEI+KFA K MGTTDVR+D
Sbjct: 1 MPKAENKKSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDP 60
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVD 415
+LNK +W+ GI ND+EDAKE+LY+LVT +P KGL T+ VD
Sbjct: 61 RLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY--VPVTSFKGLQTQNVD 117
>sptr|Q9XFT6|Q9XFT6 60S ribosomal protein L31.
Length = 116
Score = 124 bits (311), Expect = 9e-28
Identities = 65/118 (55%), Positives = 82/118 (69%)
Frame = +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M++G+G + ++VVTREYTINLHKR H TFKKKAP A+K+IR+FA K MGT+DVR+DV
Sbjct: 1 MAKGEG---KSKDVVTREYTINLHKRCHKTTFKKKAPKAVKQIREFAMKMMGTSDVRLDV 57
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVV 412
KLNK +WS GI ND EDAKE++Y+ VTVA+ + KG GT VV
Sbjct: 58 KLNKAVWSQGIKNVPTRVRIQVSRRRNDNEDAKEDMYAFVTVAD--DQTTKGKGTVVV 113
>sw|P45841|RL31_CHLRE 60S ribosomal protein L31.
Length = 116
Score = 124 bits (311), Expect = 9e-28
Identities = 66/112 (58%), Positives = 77/112 (68%)
Frame = +2
Query: 83 SRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWS 262
SR +E VTREYTI+L KRLH +FKK AP A+KEIRKFA K MGT+DVR+DVKLNK +WS
Sbjct: 6 SRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWS 65
Query: 263 SGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
GI ND+EDAKEE+YS VTVAE + KG GT VV +
Sbjct: 66 KGIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQD 115
>sptr|Q9GP16|Q9GP16 Ribosomal protein L31.
Length = 124
Score = 122 bits (306), Expect = 3e-27
Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 3/122 (2%)
Frame = +2
Query: 59 MSQGKG---GASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
M++ KG G S EVVTREYT+NLHKRLHG FKK+AP AIKEIRKFA+K MGT DVR
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 230 IDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKV 409
+D +LNK +WS G+ ND+ED+ +L++LVT +P +KGL T+
Sbjct: 61 VDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTEN 118
Query: 410 VD 415
VD
Sbjct: 119 VD 120
>sptr|Q90YT7|Q90YT7 Ribosomal protein L31.
Length = 125
Score = 119 bits (299), Expect = 2e-26
Identities = 62/116 (53%), Positives = 76/116 (65%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
K G S EVVTREYTIN+HKR+HG +FKK+AP AIKEIRKFA K MGT DVRID +LNK
Sbjct: 11 KKGRSAINEVVTREYTINVHKRIHGISFKKRAPRAIKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
+W+ G+ N++ED+ +LY+LVT +P KGL T VDE
Sbjct: 71 AVWAKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTYKGLQTVNVDE 124
>sw|Q9IA76|RL31_PAROL 60S ribosomal protein L31.
Length = 124
Score = 119 bits (297), Expect = 4e-26
Identities = 63/116 (54%), Positives = 75/116 (64%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
K G S EVVTREYTIN+HKR+HG FKK+AP AIKEIRKFA K MGT DVRID +LNK
Sbjct: 10 KKGRSAINEVVTREYTINVHKRIHGVGFKKRAPRAIKEIRKFAVKEMGTPDVRIDTRLNK 69
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
+WS G+ N++ED+ +LY+LVT +P KGL T VDE
Sbjct: 70 AVWSKGVRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTCKGLQTVNVDE 123
>sptrnew|EAA36011|EAA36011 Hypothetical protein ( (AJ296278)
putative 60s ribosomal protein.
Length = 122
Score = 118 bits (295), Expect = 6e-26
Identities = 62/117 (52%), Positives = 76/117 (64%)
Frame = +2
Query: 68 GKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLN 247
GK S +VV REYTI++HKR+HG TFKK+AP AIKEI++FA KAMGTTDVRID +LN
Sbjct: 8 GKTQRSAIADVVAREYTIHMHKRMHGVTFKKRAPRAIKEIKEFAYKAMGTTDVRIDPQLN 67
Query: 248 KHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
K +W G+ NDEE AKE+LYS V + + KGL T VV+E
Sbjct: 68 KKVWEQGVKGVAYRLRVRISRRRNDEEGAKEKLYSYVQAVNV--KNPKGLHTVVVEE 122
>sptrnew|AAH55720|AAH55720 Ribosomal protein L31.
Length = 125
Score = 116 bits (291), Expect = 2e-25
Identities = 61/116 (52%), Positives = 74/116 (63%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
K G S EVVTREYTIN+HKR+HG FKK+AP A+KEIRKFA K MGT DVRID +LNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
+W+ GI N++ED+ +LY+LVT +P K L T VDE
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
>sptrnew|AAH50113|AAH50113 Similar to ribosomal protein L31.
Length = 125
Score = 116 bits (291), Expect = 2e-25
Identities = 61/116 (52%), Positives = 74/116 (63%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
K G S EVVTREYTIN+HKR+HG FKK+AP A+KEIRKFA K MGT DVRID +LNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
+W+ GI N++ED+ +LY+LVT +P K L T VDE
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
>sw|P12947|RL31_HUMAN 60S ribosomal protein L31.
Length = 125
Score = 116 bits (291), Expect = 2e-25
Identities = 61/116 (52%), Positives = 74/116 (63%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
K G S EVVTREYTIN+HKR+HG FKK+AP A+KEIRKFA K MGT DVRID +LNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
+W+ GI N++ED+ +LY+LVT +P K L T VDE
Sbjct: 71 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
>sptrnew|CAA48925|CAA48925 Ribosomal protein L31 (Fragment).
Length = 121
Score = 116 bits (291), Expect = 2e-25
Identities = 61/116 (52%), Positives = 74/116 (63%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
K G S EVVTREYTIN+HKR+HG FKK+AP A+KEIRKFA K MGT DVRID +LNK
Sbjct: 7 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 66
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
+W+ GI N++ED+ +LY+LVT +P K L T VDE
Sbjct: 67 AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 120
>sptr|Q9CY93|Q9CY93 ERO1-like.
Length = 125
Score = 113 bits (283), Expect = 2e-24
Identities = 60/116 (51%), Positives = 73/116 (62%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
K G S EVVTREYTIN+HKR+HG FKK+A A+KEIRKFA K MGT DVRID +LNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRASRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
+W+ GI N++ED+ +LY+LVT +P K L T VDE
Sbjct: 71 AVWAKGIRNGPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
>sw|Q9V597|RL31_DROME 60S ribosomal protein L31.
Length = 124
Score = 112 bits (281), Expect = 3e-24
Identities = 62/128 (48%), Positives = 80/128 (62%)
Frame = +2
Query: 41 TRSRGDMSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTT 220
T+++G+ K S EVVTRE TI+L KR+H FKK+AP AIKEIRKFA++ MGTT
Sbjct: 2 TKTKGE----KINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTT 57
Query: 221 DVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLG 400
DVRID +LNKHIWS GI ND+ED+ +LY+ VT +P K L
Sbjct: 58 DVRIDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTY--VPVSTFKNLQ 115
Query: 401 TKVVDETD 424
T+ V+ +D
Sbjct: 116 TENVESSD 123
>sptr|Q9HDQ7|Q9HDQ7 Putative 60s ribosomal protein.
Length = 123
Score = 111 bits (277), Expect = 8e-24
Identities = 57/108 (52%), Positives = 72/108 (66%)
Frame = +2
Query: 95 EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIX 274
+VV REYTI++HKRLHG TFKK+AP AIKEI+ FA +AMGT+DVR+D +LNK +W G+
Sbjct: 18 DVVAREYTIHMHKRLHGVTFKKRAPRAIKEIKAFALQAMGTSDVRVDPQLNKKVWEQGVK 77
Query: 275 XXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
NDEE AKE+LYS V + + KGL T VV+E
Sbjct: 78 GVPYRLRIRISRRRNDEEGAKEKLYSYVQAVNV--KDPKGLQTVVVEE 123
>sw|O18602|RL31_DROVI 60S ribosomal protein L31.
Length = 128
Score = 106 bits (265), Expect = 2e-22
Identities = 61/129 (47%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Frame = +2
Query: 59 MSQGKGGASRKE---EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVR 229
M++ KG K EVVTRE TI+L KR+H FKK+AP AIKEIRKF ++ MGT DVR
Sbjct: 1 MAKTKGEKRNKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFTEREMGTNDVR 60
Query: 230 IDVKLNKHIWSSGIXXXXXXX----XXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGL 397
ID +LNKHIWS GI ND+ED+ +LY+LVT +P K L
Sbjct: 61 IDTRLNKHIWSKGISLRYRSTPFRVRVRLARRRNDDEDSPNKLYTLVTYVPVPT--FKNL 118
Query: 398 GTKVVDETD 424
T+ V+ +D
Sbjct: 119 QTENVESSD 127
>sw|P04649|RL31_YEAST 60S ribosomal protein L31 (L34) (YL28).
Length = 112
Score = 104 bits (259), Expect = 9e-22
Identities = 55/109 (50%), Positives = 70/109 (64%)
Frame = +2
Query: 92 EEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGI 271
++VVTREYTINLHKRLHG +FKK+AP A+KEI+KFA+ MGT DVR+ +LN+ IW G+
Sbjct: 4 KDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGV 63
Query: 272 XXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
N+EEDAK L+S V + KGL T VV+E
Sbjct: 64 KGVEYRLRLRISRKRNEEEDAKNPLFSY--VEPVLVASAKGLQTVVVEE 110
>sptrnew|EAA00150|EAA00150 AgCP9995 (Fragment).
Length = 128
Score = 103 bits (257), Expect = 2e-21
Identities = 55/110 (50%), Positives = 71/110 (64%)
Frame = +2
Query: 95 EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIX 274
EVVTRE TINL++RLH +KK++P AIK +RKFA+K MGTTDVRID +LNK IW GI
Sbjct: 20 EVVTRECTINLNRRLHKVGYKKRSPRAIKIVRKFAEKEMGTTDVRIDTRLNKAIWHRGIR 79
Query: 275 XXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD 424
ND+ED+ +LY+LVT +P K L T+ V+ T+
Sbjct: 80 NPPFRIRVRLSRRRNDDEDSPNKLYTLVTYVPVPT--FKELQTENVESTE 127
>sw|Q9GN74|RL31_AEDAE 60S ribosomal protein L31.
Length = 124
Score = 102 bits (253), Expect = 5e-21
Identities = 55/118 (46%), Positives = 72/118 (61%)
Frame = +2
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
K S EVVTRE TINL++RLH +KK+AP A+K +RKFA+K MGT DVRID +LNK
Sbjct: 8 KKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDTRLNK 67
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD 424
+W GI ND+ED+ +LY+LVT +P K L T+ V+ T+
Sbjct: 68 ALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTY--VPVSTFKELQTENVESTE 123
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 406,466,471
Number of Sequences: 1272877
Number of extensions: 7860446
Number of successful extensions: 23421
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23324
length of database: 406,886,216
effective HSP length: 117
effective length of database: 257,959,607
effective search space used: 21926566595
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)