BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716207.2.2
(754 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptrnew|AAQ22726|AAQ22726 40S ribosomal protein S25 (Fragment). 123 2e-27
sw|Q9SIK2|R25A_ARATH 40S ribosomal protein S25-1. 122 6e-27
sw|Q9T029|R25B_ARATH 40S ribosomal protein S25-2. 121 1e-26
sw|P46301|RS25_LYCES 40S ribosomal protein S25. 120 2e-26
sptr|Q8L955|Q8L955 Ribosomal protein S25. 119 3e-26
sptr|Q8GYL5|Q8GYL5 Putative 40S ribosomal 25S subunit. 114 2e-24
sptr|Q9SIW5|Q9SIW5 40S ribosomal protein S25. 114 2e-24
sptr|Q8ISN9|Q8ISN9 Ribosomal protein S25. 99 6e-20
sw|Q94G66|RS25_AMACR 40S ribosomal protein S25. 97 3e-19
sptrnew|AAH27208|AAH27208 Rps25 protein. 94 1e-18
sptrnew|BAC36806|BAC36806 8 days embryo whole body cDNA, RIKEN f... 94 1e-18
sw|P25111|RS25_HUMAN 40S ribosomal protein S25. 94 1e-18
sptr|Q90YP9|Q90YP9 40S ribosomal protein S25. 92 5e-18
sptrnew|EAA09243|EAA09243 AgCP14068 (Fragment). 92 9e-18
sw|P48588|RS25_DROME 40S ribosomal protein S25. 92 9e-18
sptr|Q962Q5|Q962Q5 Ribosomal protein S25. 89 8e-17
sw|P52821|RS25_CAEEL 40S ribosomal protein S25. 87 3e-16
sptr|Q9Y084|Q9Y084 40S ribosomal protein (Fragment). 79 5e-14
sptr|Q9N9V4|Q9N9V4 Ribosomal protein S25. 78 1e-13
sw|Q03409|RS25_DICDI 40S ribosomal protein S25 (S31). 78 1e-13
sw|P07282|RS25_YEAST 40S ribosomal protein S25 precursor (S31) (... 73 3e-12
sw|O74172|R25Z_SCHPO 40S ribosomal protein S25-B (S31-B). 72 8e-12
sw|P79009|R25Y_SCHPO 40S ribosomal protein S25-A (S31-A). 70 2e-11
sptrnew|EAA33995|EAA33995 Hypothetical protein. 70 3e-11
sptr|O15597|O15597 Ribosomal protein S25 (Fragment). 54 2e-06
sptr|Q8I7T1|Q8I7T1 R1 protein. 47 2e-04
sptr|Q97ZZ6|Q97ZZ6 SSU ribosomal protein S25E (rps25E). 43 0.004
sptrnew|AAP42645|AAP42645 HMW-glutenin. 37 0.21
sptrnew|EAA37192|EAA37192 GLP_243_20188_20454. 36 0.47
sptr|Q8UZI8|Q8UZI8 BOLF1. 35 1.0
>sptrnew|AAQ22726|AAQ22726 40S ribosomal protein S25 (Fragment).
Length = 94
Score = 123 bits (309), Expect = 2e-27
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN VLFDQATYDKLLSE PKYK ITPSILS+RLRINGSLAR+AI++LMARG IRMVS H
Sbjct: 23 VNNQVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAH 82
Query: 357 SSQQIYTRATNT 392
+SQQIYTRATNT
Sbjct: 83 ASQQIYTRATNT 94
>sw|Q9SIK2|R25A_ARATH 40S ribosomal protein S25-1.
Length = 108
Score = 122 bits (305), Expect = 6e-27
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN VLFDQ TYDKLL+E PK+K ITPSILS+R+RINGSLARRAI++LMA+GLIRMVS H
Sbjct: 37 VNNMVLFDQGTYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAH 96
Query: 357 SSQQIYTRATNT 392
SSQQIYTRATNT
Sbjct: 97 SSQQIYTRATNT 108
>sw|Q9T029|R25B_ARATH 40S ribosomal protein S25-2.
Length = 108
Score = 121 bits (303), Expect = 1e-26
Identities = 59/72 (81%), Positives = 68/72 (94%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN VLFDQATYDKLL+E PK+K ITPSILS+R+RINGSLARRAI++LMA+G+IRMV+ H
Sbjct: 37 VNNMVLFDQATYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAH 96
Query: 357 SSQQIYTRATNT 392
SSQQIYTRATNT
Sbjct: 97 SSQQIYTRATNT 108
>sw|P46301|RS25_LYCES 40S ribosomal protein S25.
Length = 108
Score = 120 bits (300), Expect = 2e-26
Identities = 59/72 (81%), Positives = 67/72 (93%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN VLFD++TYDKLLSE PKYK ITPS+LS+RLRI+GSLAR+AI+DLMARG IRMVS H
Sbjct: 37 VNNMVLFDKSTYDKLLSEAPKYKLITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAH 96
Query: 357 SSQQIYTRATNT 392
+SQQIYTRATNT
Sbjct: 97 ASQQIYTRATNT 108
>sptr|Q8L955|Q8L955 Ribosomal protein S25.
Length = 108
Score = 119 bits (299), Expect = 3e-26
Identities = 60/71 (84%), Positives = 66/71 (92%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN VLFDQATYDKLLSE PK+K ITPSILS+RLRINGSLARRAI++LMA+G IRMVS H
Sbjct: 37 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAH 96
Query: 357 SSQQIYTRATN 389
SSQQIYTRAT+
Sbjct: 97 SSQQIYTRATH 107
>sptr|Q8GYL5|Q8GYL5 Putative 40S ribosomal 25S subunit.
Length = 69
Score = 114 bits (284), Expect = 2e-24
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +3
Query: 189 VLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHSSQQ 368
VLFDQATYDKLLSE PK+K ITPSILS+RLRINGSLARRAI++LMA+G IRMVS HSSQQ
Sbjct: 2 VLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQ 61
Query: 369 IYTRATN 389
IYTRAT+
Sbjct: 62 IYTRATH 68
>sptr|Q9SIW5|Q9SIW5 40S ribosomal protein S25.
Length = 125
Score = 114 bits (284), Expect = 2e-24
Identities = 57/70 (81%), Positives = 63/70 (90%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN VLFDQATYDKL+SE PK+K ITPSILS+RLRINGSLAR+AI+DLM +G IRMVS H
Sbjct: 53 VNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTH 112
Query: 357 SSQQIYTRAT 386
SSQQI TRAT
Sbjct: 113 SSQQINTRAT 122
>sptr|Q8ISN9|Q8ISN9 Ribosomal protein S25.
Length = 123
Score = 99.0 bits (245), Expect = 6e-20
Identities = 47/70 (67%), Positives = 60/70 (85%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFD+ATYDKL EVP YK ITPS++SERL+I GSLAR A+K+L ++G+I++VS H
Sbjct: 40 LNNLVLFDKATYDKLYKEVPSYKLITPSVVSERLKIRGSLARAALKELHSKGMIKLVSKH 99
Query: 357 SSQQIYTRAT 386
S+Q IYTRAT
Sbjct: 100 SAQVIYTRAT 109
>sw|Q94G66|RS25_AMACR 40S ribosomal protein S25.
Length = 114
Score = 96.7 bits (239), Expect = 3e-19
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN VLFD AT+DKLLSE K K +T + LSER RINGSLARRAI++L++RG I+MV H
Sbjct: 36 VNNLVLFDNATFDKLLSEAGKQKVVTAATLSERFRINGSLARRAIRELVSRGAIKMVCHH 95
Query: 357 SSQQIYTRATN 389
SS QIYTR+TN
Sbjct: 96 SSLQIYTRSTN 106
>sptrnew|AAH27208|AAH27208 Rps25 protein.
Length = 125
Score = 94.4 bits (233), Expect = 1e-18
Identities = 44/70 (62%), Positives = 59/70 (84%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFD+ATYDKL EVP YK ITP+++SERL+I GSLAR A+++L+++GLI++VS H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 357 SSQQIYTRAT 386
+Q IYTR T
Sbjct: 104 RAQVIYTRNT 113
>sptrnew|BAC36806|BAC36806 8 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:5730411G06
product:ribosomal protein S25, full insert sequence.
Length = 125
Score = 94.4 bits (233), Expect = 1e-18
Identities = 44/70 (62%), Positives = 59/70 (84%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFD+ATYDKL EVP YK ITP+++SERL+I GSLAR A+++L+++GLI++VS H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 357 SSQQIYTRAT 386
+Q IYTR T
Sbjct: 104 RAQVIYTRNT 113
>sw|P25111|RS25_HUMAN 40S ribosomal protein S25.
Length = 125
Score = 94.4 bits (233), Expect = 1e-18
Identities = 44/70 (62%), Positives = 59/70 (84%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFD+ATYDKL EVP YK ITP+++SERL+I GSLAR A+++L+++GLI++VS H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 357 SSQQIYTRAT 386
+Q IYTR T
Sbjct: 104 RAQVIYTRNT 113
>sptr|Q90YP9|Q90YP9 40S ribosomal protein S25.
Length = 124
Score = 92.4 bits (228), Expect = 5e-18
Identities = 43/70 (61%), Positives = 58/70 (82%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFD+ATYDKL EVP YK ITP+++SERL+I GSLAR A+ +L+++G+I++VS H
Sbjct: 43 LNNLVLFDKATYDKLYKEVPNYKLITPAVVSERLKIRGSLARAALLELLSKGMIKLVSKH 102
Query: 357 SSQQIYTRAT 386
+Q IYTR T
Sbjct: 103 RAQVIYTRNT 112
>sptrnew|EAA09243|EAA09243 AgCP14068 (Fragment).
Length = 142
Score = 91.7 bits (226), Expect = 9e-18
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFD+ATYDKL EVP YK ITPS++SERL+I GSLA+R +++L +GLI++V H
Sbjct: 66 LNNQVLFDKATYDKLYKEVPAYKLITPSVVSERLKIRGSLAKRGLRELCQKGLIKLVVQH 125
Query: 357 SSQQIYTRAT 386
+Q IYTR T
Sbjct: 126 HAQVIYTRTT 135
>sw|P48588|RS25_DROME 40S ribosomal protein S25.
Length = 117
Score = 91.7 bits (226), Expect = 9e-18
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFD+ATY+KL EVP YK ITPS++SERL+I GSLA+RA+ +L +GLI+ V H
Sbjct: 43 LNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQH 102
Query: 357 SSQQIYTRAT 386
SQ IYTRAT
Sbjct: 103 HSQVIYTRAT 112
>sptr|Q962Q5|Q962Q5 Ribosomal protein S25.
Length = 119
Score = 88.6 bits (218), Expect = 8e-17
Identities = 42/70 (60%), Positives = 55/70 (78%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFD+ TY+KL EVP+YK ITP+++SERL++ GSLARRA+ +L +GLI+ V H
Sbjct: 43 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 102
Query: 357 SSQQIYTRAT 386
Q IYTRAT
Sbjct: 103 HGQVIYTRAT 112
>sw|P52821|RS25_CAEEL 40S ribosomal protein S25.
Length = 117
Score = 86.7 bits (213), Expect = 3e-16
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN VLFDQATYDKL EV YK ITPS++SERL++ SLA+ +K+L A+GL++ V H
Sbjct: 40 LNNMVLFDQATYDKLYKEVITYKLITPSVVSERLKVRASLAKAGLKELQAKGLVKCVVHH 99
Query: 357 SSQQIYTRAT 386
Q +YTRAT
Sbjct: 100 HGQVVYTRAT 109
>sptr|Q9Y084|Q9Y084 40S ribosomal protein (Fragment).
Length = 82
Score = 79.3 bits (194), Expect = 5e-14
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
++N VLFDQATYDKL E+ K ITPS++SERL++ SLA+ + +L +GLI+ V H
Sbjct: 8 LSNMVLFDQATYDKLYKEIISVKLITPSVVSERLKVRASLAKAGLDELHQKGLIKCVVKH 67
Query: 357 SSQQIYTRAT 386
SQ +YTRAT
Sbjct: 68 GSQLVYTRAT 77
>sptr|Q9N9V4|Q9N9V4 Ribosomal protein S25.
Length = 120
Score = 78.2 bits (191), Expect = 1e-13
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+ NAV+FD+ TYDKL SEVPKYK ITPSI+S+RL+I S+A +K L LIR+VS
Sbjct: 36 LQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIRLVSCS 95
Query: 357 SSQQIYTR 380
S ++YTR
Sbjct: 96 SKTRVYTR 103
>sw|Q03409|RS25_DICDI 40S ribosomal protein S25 (S31).
Length = 110
Score = 78.2 bits (191), Expect = 1e-13
Identities = 36/69 (52%), Positives = 53/69 (76%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NNA+LFD+ TY KLL E+P K IT +++SER++ NGSLARRAIK+L+++GLI+ +
Sbjct: 41 LNNAILFDKETYAKLLKEMPTAKVITTAVVSERMKCNGSLARRAIKELLSKGLIKQIIKG 100
Query: 357 SSQQIYTRA 383
+YT+A
Sbjct: 101 HGNGVYTKA 109
>sw|P07282|RS25_YEAST 40S ribosomal protein S25 precursor (S31)
(YS23) (RP45).
Length = 108
Score = 73.2 bits (178), Expect = 3e-12
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = +3
Query: 183 NAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHSS 362
+AV+ DQ YD++L EVP Y+ ++ S+L +RL+I GSLAR A++ L G+I+ +S HS
Sbjct: 38 HAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSK 97
Query: 363 QQIYTRA 383
Q IYTRA
Sbjct: 98 QAIYTRA 104
>sw|O74172|R25Z_SCHPO 40S ribosomal protein S25-B (S31-B).
Length = 88
Score = 72.0 bits (175), Expect = 8e-12
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = +3
Query: 183 NAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHSS 362
+A +FD++ D++ EVP +K I+ S+L +R++INGSLAR AI+DL RG+I+ V HS
Sbjct: 18 HATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVDQHSK 77
Query: 363 QQIYTRA 383
Q IYTRA
Sbjct: 78 QAIYTRA 84
>sw|P79009|R25Y_SCHPO 40S ribosomal protein S25-A (S31-A).
Length = 89
Score = 70.5 bits (171), Expect = 2e-11
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = +3
Query: 183 NAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHSS 362
+A +FD++ D++ EVP +K I+ S+L +R++INGSLAR AI+DL RG+I+ V HS
Sbjct: 18 HATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVDQHSK 77
Query: 363 QQIYTR 380
Q IYTR
Sbjct: 78 QAIYTR 83
>sptrnew|EAA33995|EAA33995 Hypothetical protein.
Length = 97
Score = 70.1 bits (170), Expect = 3e-11
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 183 NAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHSS 362
+AV+ D++T DKL +V Y+ +T + L +RL+INGSLARR +KDL +G I+ V HS
Sbjct: 26 HAVILDKSTSDKLYKDVQSYRLVTVATLVDRLKINGSLARRCLKDLEEKGQIKQVVGHSK 85
Query: 363 QQIYTRA 383
+IYTRA
Sbjct: 86 MKIYTRA 92
>sptr|O15597|O15597 Ribosomal protein S25 (Fragment).
Length = 129
Score = 53.9 bits (128), Expect = 2e-06
Identities = 26/69 (37%), Positives = 44/69 (63%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
+NN V+FD+AT DK +VP K ITP ++++R+ I G+L + +K L + LI V V
Sbjct: 39 LNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKELIVPVKVD 98
Query: 357 SSQQIYTRA 383
++++R+
Sbjct: 99 YHIRVFSRS 107
>sptr|Q8I7T1|Q8I7T1 R1 protein.
Length = 134
Score = 47.4 bits (111), Expect = 2e-04
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 155 QGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASEDQRLPCSEGHQGLDGAWP 334
QG+ +G+ + + R G LRQAA Q ++HP H LR +E + + + GH G P
Sbjct: 3 QGQEQGQAQPLRSFRQGDLRQAACRHPQGSSDHPAHCLRKTEGECVAGASGHPLPQGPRP 62
Query: 335 HSD-GLGPLKPADLHQGNQYIRMGKRSKMHCLPSL 436
D P P LHQ +Q +++ S+ L L
Sbjct: 63 DQDCRRAPPLPVHLHQKHQCLKVDVSSREQLLCDL 97
>sptr|Q97ZZ6|Q97ZZ6 SSU ribosomal protein S25E (rps25E).
Length = 110
Score = 43.1 bits (100), Expect = 0.004
Identities = 22/70 (31%), Positives = 42/70 (60%)
Frame = +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
++ AV D+ T K+L E+ K ITP L+ + I+ S+AR+ +K+L + ++++ S +
Sbjct: 41 ISRAVTIDEETKKKVLDEIKKESIITPYALATKSGISISVARKILKELENQNVVKLYSKN 100
Query: 357 SSQQIYTRAT 386
+IY A+
Sbjct: 101 RRLEIYIAAS 110
>sptrnew|AAP42645|AAP42645 HMW-glutenin.
Length = 742
Score = 37.4 bits (85), Expect = 0.21
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Frame = +2
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAAL-GGAQV 241
+ G + GQG V GQ R + +++ QG+ + +Q G +PGY + L G
Sbjct: 444 QQGQQPGQGQQPV--QGQPRNYLTSPQQLGQGQQPRQWQQPGQGQPGYYPTSPLQSGQGQ 501
Query: 242 QANHPFHPLRASEDQR----LPCSEGHQGLDGAWPHSDGLGP-----LKPADLHQG 382
Q +P P + ++Q+ +G QG P G G L+PA QG
Sbjct: 502 QGYYPTSPQQPGQEQQPGQWQQSGQGQQGYYPTSPQQSGQGQQPGQWLQPAQGQQG 557
Score = 32.0 bits (71), Expect = 8.8
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 21/122 (17%)
Frame = +2
Query: 80 EGQGPAAVVEA--GQVRWWQAKEEEVEQGKAKGEGKQRG-AVRPGYLRQAALG------- 229
+GQ P ++ GQ ++ ++ QG+ G+G+Q G +PG +Q+ G
Sbjct: 541 QGQQPGQWLQPAQGQQGYYPTSPQQSGQGQQPGQGQQSGQGQQPGQGQQSGQGQQPGQWL 600
Query: 230 --GAQVQANHPFHPLRASEDQR----LPCSEGHQGLDGAWPHSDGLGP-----LKPADLH 376
G Q +P P ++ + Q+ L +G QG P G G L+P
Sbjct: 601 QPGQGQQGYYPTSPQQSGQGQQPGQWLQPGQGQQGYYPTSPQQSGQGQQPGQWLQPGQGQ 660
Query: 377 QG 382
QG
Sbjct: 661 QG 662
>sptrnew|EAA37192|EAA37192 GLP_243_20188_20454.
Length = 88
Score = 36.2 bits (82), Expect = 0.47
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +3
Query: 198 DQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHSSQQIYT 377
D+A ++ L + K IT + + ERLR++ +LA+R ++ L+ G +VS S I+
Sbjct: 23 DEAAMNEALKFIKNSKCITHTQICERLRVSVALAKRVMRQLVKSGDFAIVSKSSRMTIFK 82
Query: 378 RAT 386
T
Sbjct: 83 NMT 85
>sptr|Q8UZI8|Q8UZI8 BOLF1.
Length = 1228
Score = 35.0 bits (79), Expect = 1.0
Identities = 28/115 (24%), Positives = 46/115 (40%)
Frame = +2
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQAN 250
G + GQG E ++ W KEE+ E+G+ +G + G P +A G +
Sbjct: 1106 GSDSGQGEEERWEDDEL--WDVKEEDEEEGEREGRPAEFGTPPPKAGAEAEPSGHRRSRR 1163
Query: 251 HPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIRMGKRSK 415
H ++R P GLDG + + P +P L R+ R++
Sbjct: 1164 H------RGGNRRAPPGRAASGLDGGEEEAVAVFPTRPPYLSAAAAASRVRPRAR 1212
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 459,731,192
Number of Sequences: 1272877
Number of extensions: 9398357
Number of successful extensions: 28727
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28585
length of database: 406,886,216
effective HSP length: 120
effective length of database: 254,140,976
effective search space used: 33038326880
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)