BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131543.2.5
(545 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptr|Q9FP55|Q9FP55 P0475H04.11 protein. 98 5e-20
sptr|Q9FR31|Q9FR31 Ripening regulated protein DDTFR19. 90 1e-17
sptr|Q9MAW5|Q9MAW5 Ribosomal protein L29. 89 3e-17
sptr|Q9M7X7|Q9M7X7 Ribosomal protein L29, putative. 89 3e-17
sptr|Q9M7X5|Q9M7X5 Ribosomal protein L29, putative (Ribosomal pr... 89 3e-17
sptr|Q84WM0|Q84WM0 At3g06680. 87 1e-16
sptr|Q90YT8|Q90YT8 Ribosomal protein L29. 76 2e-13
sptrnew|EAA10983|EAA10983 AgCP5781 (Fragment). 76 3e-13
sptr|Q95V37|Q95V37 Ribosomal protein L29. 73 2e-12
sptr|Q8HXB8|Q8HXB8 Ribosomal protein L29. 73 2e-12
sptrnew|AAH02062|AAH02062 Ribosomal protein L29. 73 2e-12
sptrnew|BAC40419|BAC40419 2 days neonate thymus thymic cells cDN... 73 2e-12
sptrnew|BAB28782|BAB28782 10, 11 days embryo whole body cDNA, RI... 73 2e-12
sptrnew|AAF69833|AAF69833 Ribosomal protein L29. 73 2e-12
sptr|Q9XS36|Q9XS36 Ribosomal protein L29/heparin/heparan sulfate... 73 2e-12
sptrnew|AAH53776|AAH53776 Hypothetical protein. 72 5e-12
sw|P47915|RL29_MOUSE 60S ribosomal protein L29. 71 7e-12
sw|P47914|RL29_HUMAN 60S ribosomal protein L29 (Cell surface hep... 71 7e-12
sptr|O45226|O45226 B0513.3 protein. 71 7e-12
sw|P25886|RL29_RAT 60S ribosomal protein L29 (P23). 71 7e-12
sw|Q95281|RL29_PIG 60S ribosomal protein L29 (Fragment). 70 2e-11
sw|Q24154|RL29_DROME 60S ribosomal protein L29 (L43). 69 3e-11
sw|P05747|RL29_YEAST 60S ribosomal protein L29 (YL43). 69 4e-11
sptrnew|EAA37042|EAA37042 GLP_433_2266_2454. 67 2e-10
sptrnew|EAA28550|EAA28550 Hypothetical protein. 65 5e-10
sptr|Q8SXW1|Q8SXW1 RH58777p. 65 5e-10
sw|Q92366|RL29_SCHPO 60S ribosomal protein L29 (L43). 62 5e-09
sptr|Q9XST9|Q9XST9 Ribosomal protein (Fragment). 61 7e-09
sptr|Q9Y083|Q9Y083 60S ribosomal protein L29 (Fragment). 52 3e-06
sptr|Q9NAG9|Q9NAG9 Y47H9C.14 protein. 51 7e-06
>sptr|Q9FP55|Q9FP55 P0475H04.11 protein.
Length = 60
Score = 98.2 bits (243), Expect = 5e-20
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHTAHNQS+KAHKNGIKKPKRHRQTSTKGMDPKFLRN RYSR
Sbjct: 1 MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNQRYSR 47
>sptr|Q9FR31|Q9FR31 Ripening regulated protein DDTFR19.
Length = 54
Score = 90.1 bits (222), Expect = 1e-17
Identities = 39/47 (82%), Positives = 45/47 (95%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHTAHNQS+KAH+NGIKKP++HR +STKGMDPKFLRN RY+R
Sbjct: 1 MAKSKNHTAHNQSYKAHRNGIKKPRKHRHSSTKGMDPKFLRNQRYAR 47
>sptr|Q9MAW5|Q9MAW5 Ribosomal protein L29.
Length = 61
Score = 89.0 bits (219), Expect = 3e-17
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHTAHNQS KAH+NGIKKP++HR TST+GMDPKFLRN RY+R
Sbjct: 1 MAKSKNHTAHNQSHKAHRNGIKKPRKHRHTSTRGMDPKFLRNQRYAR 47
>sptr|Q9M7X7|Q9M7X7 Ribosomal protein L29, putative.
Length = 61
Score = 89.0 bits (219), Expect = 3e-17
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 47
>sptr|Q9M7X5|Q9M7X5 Ribosomal protein L29, putative (Ribosomal
protein L29, putative, 6298-6620).
Length = 61
Score = 89.0 bits (219), Expect = 3e-17
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+R
Sbjct: 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYAR 47
>sptr|Q84WM0|Q84WM0 At3g06680.
Length = 61
Score = 87.0 bits (214), Expect = 1e-16
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYS 288
MAKSKNHTAHNQS KAHKNGIKKP+RHR T T+GMDPKFLRN RY+
Sbjct: 1 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYA 46
>sptr|Q90YT8|Q90YT8 Ribosomal protein L29.
Length = 64
Score = 76.3 bits (186), Expect = 2e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQS K H+NGIKKP+ HR S KG+DPKFLRN+R+++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSHRYESLKGVDPKFLRNMRFAK 47
>sptrnew|EAA10983|EAA10983 AgCP5781 (Fragment).
Length = 107
Score = 75.9 bits (185), Expect = 3e-13
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQ+ KAHKNGIKKPKR R S +GM KFLRNLRYS+
Sbjct: 32 MAKSKNHTNHNQNQKAHKNGIKKPKRKRNESKRGMCQKFLRNLRYSK 78
>sptr|Q95V37|Q95V37 Ribosomal protein L29.
Length = 73
Score = 73.2 bits (178), Expect = 2e-12
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQ+ KAH+NGIKKP + R ST GMDPKFLRN R+ +
Sbjct: 1 MAKSKNHTNHNQNRKAHRNGIKKPTKQRHESTLGMDPKFLRNQRFCK 47
>sptr|Q8HXB8|Q8HXB8 Ribosomal protein L29.
Length = 157
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 47
>sptrnew|AAH02062|AAH02062 Ribosomal protein L29.
Length = 160
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 47
>sptrnew|BAC40419|BAC40419 2 days neonate thymus thymic cells cDNA,
RIKEN full-length enriched library, clone:E430020A21
product:ribosomal protein L29, full insert sequence.
Length = 160
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 47
>sptrnew|BAB28782|BAB28782 10, 11 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:2810449A21
product:ribosomal protein L29, full insert sequence.
Length = 160
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 47
>sptrnew|AAF69833|AAF69833 Ribosomal protein L29.
Length = 160
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 47
>sptr|Q9XS36|Q9XS36 Ribosomal protein L29/heparin/heparan sulfate
interacting protein.
Length = 160
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 47
>sptrnew|AAH53776|AAH53776 Hypothetical protein.
Length = 75
Score = 71.6 bits (174), Expect = 5e-12
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQS K H+NGIKKP R S KG+DPKFLRN+R+++
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPVSQRYESLKGVDPKFLRNMRFAK 47
>sw|P47915|RL29_MOUSE 60S ribosomal protein L29.
Length = 159
Score = 71.2 bits (173), Expect = 7e-12
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = -1
Query: 422 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
AKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 46
>sw|P47914|RL29_HUMAN 60S ribosomal protein L29 (Cell surface
heparin binding protein HIP).
Length = 158
Score = 71.2 bits (173), Expect = 7e-12
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = -1
Query: 422 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
AKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 46
>sptr|O45226|O45226 B0513.3 protein.
Length = 62
Score = 71.2 bits (173), Expect = 7e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQ+ KAH+NGI KPK+H S KG+D KF++NLR+SR
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKPKKHIFLSMKGVDAKFIKNLRFSR 47
>sw|P25886|RL29_RAT 60S ribosomal protein L29 (P23).
Length = 155
Score = 71.2 bits (173), Expect = 7e-12
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = -1
Query: 422 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
AKSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 46
>sw|Q95281|RL29_PIG 60S ribosomal protein L29 (Fragment).
Length = 92
Score = 69.7 bits (169), Expect = 2e-11
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = -1
Query: 419 KSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
KSKNHT HNQS K H+NGIKKP+ R S KG+DPKFLRN+R+++
Sbjct: 2 KSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAK 46
>sw|Q24154|RL29_DROME 60S ribosomal protein L29 (L43).
Length = 76
Score = 69.3 bits (168), Expect = 3e-11
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAKSKNHT HNQ+ KAH+NGIK+P R R ST GMD KFL N RY+R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYAR 47
>sw|P05747|RL29_YEAST 60S ribosomal protein L29 (YL43).
Length = 58
Score = 68.6 bits (166), Expect = 4e-11
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = -1
Query: 422 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYS 288
AKSKNHTAHNQ+ KAH+NGIKKPK ++ S KG+DPKF RN +++
Sbjct: 1 AKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRRNHKHA 45
>sptrnew|EAA37042|EAA37042 GLP_433_2266_2454.
Length = 62
Score = 66.6 bits (161), Expect = 2e-10
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
MAK KNHT+ NQ+ K H+NGIKKPK+ TS KGM PK+LRNLR SR
Sbjct: 1 MAKLKNHTSKNQNRKDHRNGIKKPKKSAYTSHKGMCPKYLRNLRRSR 47
>sptrnew|EAA28550|EAA28550 Hypothetical protein.
Length = 65
Score = 65.1 bits (157), Expect = 5e-10
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYS 288
MAKSKN + HNQS KAH+NGIKKPK R S KG DPKF RN R++
Sbjct: 1 MAKSKNSSQHNQSRKAHRNGIKKPKTSRYPSLKGTDPKFRRNHRHA 46
>sptr|Q8SXW1|Q8SXW1 RH58777p.
Length = 56
Score = 65.1 bits (157), Expect = 5e-10
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRY 291
MAKSKNHT HNQ+ KAH+NGIK+P R R ST GMD KFL N Y
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQHY 45
>sw|Q92366|RL29_SCHPO 60S ribosomal protein L29 (L43).
Length = 60
Score = 61.6 bits (148), Expect = 5e-09
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = -1
Query: 422 AKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYS 288
AKSKNHT HNQ+ KAH+NGIK+P++HR S K D KF RN +++
Sbjct: 1 AKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFA 45
>sptr|Q9XST9|Q9XST9 Ribosomal protein (Fragment).
Length = 123
Score = 61.2 bits (147), Expect = 7e-09
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
M KS NHT HN S K H+NGI KP+ R S KG+ PKFLRN R+++
Sbjct: 1 MXKSXNHTTHNHSRKWHRNGIXKPRSQRYESLKGVXPKFLRNXRFAK 47
>sptr|Q9Y083|Q9Y083 60S ribosomal protein L29 (Fragment).
Length = 35
Score = 52.4 bits (124), Expect = 3e-06
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -1
Query: 425 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGM 321
MAKSKNHT HNQ+ K H+NGI KPKR R S KG+
Sbjct: 1 MAKSKNHTNHNQNRKDHRNGIYKPKRERYMSMKGV 35
>sptr|Q9NAG9|Q9NAG9 Y47H9C.14 protein.
Length = 87
Score = 51.2 bits (121), Expect = 7e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = -1
Query: 419 KSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 285
K +NHT HN++ KAH+NGI KPK+H S +G +F+++LR+ R
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFR 58
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,798,710
Number of Sequences: 1272877
Number of extensions: 6232550
Number of successful extensions: 15349
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15341
length of database: 406,886,216
effective HSP length: 115
effective length of database: 260,505,361
effective search space used: 17193353826
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)